Metagenome / Metatranscriptome Family F062620

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062620
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	71 residues
Representative Sequence	MAEEPKTELEKSLRALLLVNLEPLKQKQQITILDKAGFGQSEIAEVVGSTPKAVSVRLAEIRKESRKGKSK
Number of Associated Samples	101
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.62 %
% of genes near scaffold ends (potentially truncated)	19.23 %
% of genes from short scaffolds (< 2000 bps)	67.69 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.846 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (19.231 % of family members)
Environment Ontology (ENVO)	Unclassified (18.462 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.154 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.53% β-sheet: 0.00% Coil/Unstructured: 47.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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SCOP family	SCOP domain	Representative PDB	TM-score
a.4.6.2: GerE-like (LuxR/UhpA family of transcriptional regulators)	d1yioa1	1yio	0.64564
a.4.6.0: automated matches	d3ulqb_	3ulq	0.64053
a.4.13.3: YlxM/p13-like	d1xsva_	1xsv	0.63371
a.4.6.2: GerE-like (LuxR/UhpA family of transcriptional regulators)	d1a04a1	1a04	0.63205
a.4.12.2: Chromosomal replication initiation factor DnaA C-terminal domain IV	d1l8qa1	1l8q	0.63199

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF13545	HTH_Crp_2	15.38
PF00325	Crp	7.69
PF12770	CHAT	5.38
PF13384	HTH_23	3.08
PF12867	DinB_2	1.54
PF00582	Usp	0.77
PF00196	GerE	0.77
PF08281	Sigma70_r4_2	0.77
PF13412	HTH_24	0.77
PF07228	SpoIIE	0.77
PF03781	FGE-sulfatase	0.77
PF07992	Pyr_redox_2	0.77
PF13620	CarboxypepD_reg	0.77
PF13518	HTH_28	0.77
PF12686	DUF3800	0.77
PF00378	ECH_1	0.77
PF13744	HTH_37	0.77
PF00005	ABC_tran	0.77
PF03372	Exo_endo_phos	0.77
PF01904	DUF72	0.77
PF10137	TIR-like	0.77
PF02310	B12-binding	0.77
PF01022	HTH_5	0.77
PF07804	HipA_C	0.77
PF00857	Isochorismatase	0.77
PF03949	Malic_M	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0281	Malic enzyme	Energy production and conversion [C]	0.77
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	0.77
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.77
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.77
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.77
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.77
COG3550	Serine/threonine protein kinase HipA, toxin component of the HipAB toxin-antitoxin module	Signal transduction mechanisms [T]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.62 %
Unclassified	root	N/A	5.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.85 %
Unclassified	root	N/A	5.38 %
Viruses	superkingdom	All Organisms → Viruses	0.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.85 %
Unclassified	root	N/A	5.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	65.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.92 %
Unclassified	root	N/A	5.38 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	61.54 %
Unclassified	root	N/A	5.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.31 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.31 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.54 %
Unclassified	root	N/A	5.38 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.31 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.54 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.54 %
Unclassified	root	N/A	5.38 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.54 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.54 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.54 %
Unclassified	root	N/A	5.38 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1.54 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.77 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.54 %
Unclassified	root	N/A	5.38 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.77 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.77 %
unclassified Afipia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.54 %
Unclassified	root	N/A	5.38 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.77 %
Afipia sp. OHSU_II-uncloned	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. OHSU_II-uncloned	0.77 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10301794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1001	Open in IMG/M
3300001593\|JGI12635J15846_10333217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300001593\|JGI12635J15846_10613351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300004092\|Ga0062389_100366579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1544	Open in IMG/M
3300004092\|Ga0062389_100559406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1301	Open in IMG/M
3300004092\|Ga0062389_100986771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1027	Open in IMG/M
3300004152\|Ga0062386_100121586	All Organisms → cellular organisms → Bacteria → Proteobacteria	2020	Open in IMG/M
3300004635\|Ga0062388_102431068	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300005166\|Ga0066674_10324536	All Organisms → cellular organisms → Bacteria → Proteobacteria	723	Open in IMG/M
3300005338\|Ga0068868_102413941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300005445\|Ga0070708_100117537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. OHSU_II-uncloned	2449	Open in IMG/M
3300005526\|Ga0073909_10080078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1253	Open in IMG/M
3300005538\|Ga0070731_10001182	All Organisms → cellular organisms → Bacteria	28218	Open in IMG/M
3300005538\|Ga0070731_10048233	All Organisms → cellular organisms → Bacteria	2841	Open in IMG/M
3300005542\|Ga0070732_10000069	All Organisms → cellular organisms → Bacteria	99689	Open in IMG/M
3300005542\|Ga0070732_10011030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	4969	Open in IMG/M
3300005542\|Ga0070732_10021497	All Organisms → cellular organisms → Bacteria → Proteobacteria	3634	Open in IMG/M
3300005553\|Ga0066695_10075694	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300005712\|Ga0070764_10320499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300005712\|Ga0070764_10337276	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300006028\|Ga0070717_11039025	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300006031\|Ga0066651_10265573	Not Available	911	Open in IMG/M
3300006050\|Ga0075028_100822173	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300006052\|Ga0075029_100028848	All Organisms → cellular organisms → Bacteria → Proteobacteria	3142	Open in IMG/M
3300006052\|Ga0075029_100678613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300006794\|Ga0066658_10073239	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300006797\|Ga0066659_11694990	All Organisms → cellular organisms → Bacteria → Proteobacteria	533	Open in IMG/M
3300006893\|Ga0073928_10054639	All Organisms → cellular organisms → Bacteria → Proteobacteria	3571	Open in IMG/M
3300009088\|Ga0099830_11178983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300009137\|Ga0066709_100136934	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3099	Open in IMG/M
3300009518\|Ga0116128_1049379	All Organisms → Viruses → Predicted Viral	1332	Open in IMG/M
3300009632\|Ga0116102_1174465	Not Available	584	Open in IMG/M
3300010339\|Ga0074046_10006691	All Organisms → cellular organisms → Bacteria	9016	Open in IMG/M
3300010339\|Ga0074046_10713905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300011270\|Ga0137391_10647422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	882	Open in IMG/M
3300011271\|Ga0137393_10290879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1390	Open in IMG/M
3300012206\|Ga0137380_11502151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300012211\|Ga0137377_10476905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1186	Open in IMG/M
3300012917\|Ga0137395_10130121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1705	Open in IMG/M
3300012924\|Ga0137413_10792306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300012931\|Ga0153915_10946257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300012944\|Ga0137410_10227286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1454	Open in IMG/M
3300013307\|Ga0157372_12556026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300014156\|Ga0181518_10592641	Not Available	517	Open in IMG/M
3300014492\|Ga0182013_10076237	All Organisms → cellular organisms → Bacteria	2372	Open in IMG/M
3300014493\|Ga0182016_10345352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300014501\|Ga0182024_11132190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	921	Open in IMG/M
3300014638\|Ga0181536_10179739	Not Available	1075	Open in IMG/M
3300014655\|Ga0181516_10013338	All Organisms → cellular organisms → Bacteria	4438	Open in IMG/M
3300014838\|Ga0182030_10088697	All Organisms → cellular organisms → Bacteria	4385	Open in IMG/M
3300014838\|Ga0182030_10568614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1105	Open in IMG/M
3300015241\|Ga0137418_10065315	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3322	Open in IMG/M
3300016728\|Ga0181500_1036139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1207	Open in IMG/M
3300017925\|Ga0187856_1010225	All Organisms → cellular organisms → Bacteria	5443	Open in IMG/M
3300017930\|Ga0187825_10337095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300017934\|Ga0187803_10470742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300017940\|Ga0187853_10021137	All Organisms → cellular organisms → Bacteria	3616	Open in IMG/M
3300017972\|Ga0187781_11452643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300017988\|Ga0181520_10368827	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1051	Open in IMG/M
3300018016\|Ga0187880_1375683	Not Available	598	Open in IMG/M
3300018022\|Ga0187864_10062647	All Organisms → cellular organisms → Bacteria	2038	Open in IMG/M
3300018044\|Ga0187890_10282149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	933	Open in IMG/M
3300018044\|Ga0187890_10587459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300018062\|Ga0187784_10044499	All Organisms → cellular organisms → Bacteria	3589	Open in IMG/M
3300018090\|Ga0187770_10183241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1608	Open in IMG/M
3300018433\|Ga0066667_10101498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1916	Open in IMG/M
3300020579\|Ga0210407_10162355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1726	Open in IMG/M
3300020580\|Ga0210403_10399981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1122	Open in IMG/M
3300020581\|Ga0210399_10013122	All Organisms → cellular organisms → Bacteria	6507	Open in IMG/M
3300020581\|Ga0210399_10039680	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3770	Open in IMG/M
3300020582\|Ga0210395_10240875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1359	Open in IMG/M
3300020583\|Ga0210401_10124137	All Organisms → cellular organisms → Bacteria	2421	Open in IMG/M
3300020583\|Ga0210401_11281051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300020583\|Ga0210401_11431505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300021168\|Ga0210406_10053852	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3510	Open in IMG/M
3300021168\|Ga0210406_10287451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1340	Open in IMG/M
3300021171\|Ga0210405_10005098	All Organisms → cellular organisms → Bacteria	12110	Open in IMG/M
3300021181\|Ga0210388_10082294	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	2733	Open in IMG/M
3300021181\|Ga0210388_10270047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1493	Open in IMG/M
3300021181\|Ga0210388_11224691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300021401\|Ga0210393_11489229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300021420\|Ga0210394_10037003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4335	Open in IMG/M
3300021420\|Ga0210394_10042213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4018	Open in IMG/M
3300021420\|Ga0210394_11130698	Not Available	674	Open in IMG/M
3300021432\|Ga0210384_11046635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300021432\|Ga0210384_11737130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300021433\|Ga0210391_10214170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1514	Open in IMG/M
3300021433\|Ga0210391_11083551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300021475\|Ga0210392_10535518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300021477\|Ga0210398_10878107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300022557\|Ga0212123_10031541	All Organisms → cellular organisms → Bacteria	5423	Open in IMG/M
3300022881\|Ga0224545_1045069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300025928\|Ga0207700_11758049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300026023\|Ga0207677_12161317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300026557\|Ga0179587_11039539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300027587\|Ga0209220_1174494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300027645\|Ga0209117_1052869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1197	Open in IMG/M
3300027648\|Ga0209420_1158170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300027842\|Ga0209580_10000034	All Organisms → cellular organisms → Bacteria	161349	Open in IMG/M
3300027842\|Ga0209580_10015342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3349	Open in IMG/M
3300027869\|Ga0209579_10000817	All Organisms → cellular organisms → Bacteria	27916	Open in IMG/M
3300027869\|Ga0209579_10030853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2923	Open in IMG/M
3300027879\|Ga0209169_10557268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300027895\|Ga0209624_10574247	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300027911\|Ga0209698_10084738	All Organisms → cellular organisms → Bacteria	2681	Open in IMG/M
3300028748\|Ga0302156_10239246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300028866\|Ga0302278_10162585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1149	Open in IMG/M
3300029636\|Ga0222749_10348383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300029817\|Ga0247275_1171766	Not Available	536	Open in IMG/M
3300029907\|Ga0311329_10551061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300029985\|Ga0302280_1209307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300029999\|Ga0311339_10206621	All Organisms → cellular organisms → Bacteria → Acidobacteria	2212	Open in IMG/M
3300030007\|Ga0311338_11825141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300030815\|Ga0265746_1050786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300031057\|Ga0170834_110572297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300031234\|Ga0302325_10696906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1464	Open in IMG/M
3300031236\|Ga0302324_100163590	All Organisms → cellular organisms → Bacteria → Acidobacteria	3622	Open in IMG/M
3300031236\|Ga0302324_102907862	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300031708\|Ga0310686_119731704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2003	Open in IMG/M
3300031715\|Ga0307476_10043059	All Organisms → cellular organisms → Bacteria	3053	Open in IMG/M
3300032770\|Ga0335085_10019058	All Organisms → cellular organisms → Bacteria	9839	Open in IMG/M
3300032770\|Ga0335085_10031923	All Organisms → cellular organisms → Bacteria	7331	Open in IMG/M
3300032770\|Ga0335085_10059149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5128	Open in IMG/M
3300032770\|Ga0335085_12216592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300032805\|Ga0335078_11881632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300032892\|Ga0335081_10224204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2570	Open in IMG/M
3300032892\|Ga0335081_10599285	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1359	Open in IMG/M
3300032898\|Ga0335072_11528770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300032954\|Ga0335083_10740758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300033158\|Ga0335077_11086994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.69%
Host-Associated	Host-Associated	2.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.92%
Aquatic	Environmental → Aquatic	20.77%
Plants	Host-Associated → Plants	2.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.23%
Freshwater	Environmental → Aquatic → Freshwater	16.15%
Peat	Environmental → Terrestrial → Peat	7.69%
Sediment	Environmental → Aquatic → Sediment	3.08%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.15%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.38%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.08%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.38%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.08%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.31%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.54%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.23%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.69%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.38%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.85%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.08%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.08%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.08%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.31%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.31%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.31%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.54%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.54%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.54%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.54%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.77%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.77%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016728	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029985	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_1	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_103017944	3300001593	Forest Soil	MAEEPKTELEKSLRALLLVNLEPLKQKQQITILDKAGFGQSEIAVVVGSTPKAVSVRLAEIRKESRKGKSK*
JGI12635J15846_103332172	3300001593	Forest Soil	VAEEPKTELEKSLRALVLVSLEPLKQKQQITILDKAGFGQSEIAEVVGSTPKAVSVRLAEIRKEARKGKSK*
JGI12635J15846_106133512	3300001593	Forest Soil	MAEEPKTELEKSLRALLLVNLGPLKQKQQITILDKAGFGQSEIAEVVGSTPKAVSVRLSEIRKEARKGKSK*
Ga0062389_1003665792	3300004092	Bog Forest Soil	VAGEPRTEMEKTLRAMLLVSLDSLKQKPQIAILDKAGFGQSEIAEVIGSTPKAVSVRLAEIRKEARKGKSK*
Ga0062389_1005594061	3300004092	Bog Forest Soil	VAEEANGSALEKTLRALLLIQMESMRQKQQIALLDKAGFGQSEIARAVGSTPGAVSVRLAEIRREARKNRGRNKE*
Ga0062389_1009867713	3300004092	Bog Forest Soil	MAEEPKTELEKSMRALLLVNLEPLKQKQQITILDKAGFGQSEIAVVVGSTPKAVSVRLAEIRKEARKGKSK*
Ga0062386_1001215865	3300004152	Bog Forest Soil	VAGEPKTELEKTLRALLLVSLDSLKQKPQIAILDKAGFGPSEIATVIGSTPNAVNVRLSEIRKETRKNQKK*
Ga0062388_1024310682	3300004635	Bog Forest Soil	MAEEPKTELEKSMRALLLVNLEPLKQKQQITILDKAGFGQSEIAVVVGSTPKAVSVRLAEIRKESRKGKS
Ga0066674_103245362	3300005166	Soil	VAGEPKTEMEKTLRALLLVSLASMKQKQQIAILDKAGFGQSEIATVIGSTSNSVSVRLAEIRKEARKGKSE*
Ga0068868_1024139412	3300005338	Miscanthus Rhizosphere	VAEKPKTELEKSLRALLLVSLDPLRQKQQIIILDKAGFGPSEIATVIGSTSNTVNVRLSEVRKEARKGKSK*
Ga0070708_1001175375	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LRALLLVNLGSLKQKQQIAILDKAGFGQSEIADVVGSTPKAVSVRLAEIRKEARKERDHKSK*
Ga0073909_100800781	3300005526	Surface Soil	KSLRALLLVNLEPLKQKQQITILDKAGFGQSEIAVVVGSTPKAVSVRLAEIRKEARKGQSK*
Ga0070731_100011823	3300005538	Surface Soil	VPMAEEPRTELEKSLRALLLVNLEPLRQKQQIAILDKAGFGQSEIAEVVGSTPKAVSVRLAEIRKEAREGKSK*
Ga0070731_100482335	3300005538	Surface Soil	VAGEPKTEMEKTLRALLLVSLDSLKQKPQIAILDKAGFGQSEIAEVIGSTPKAVSVRLAEIRKEARKGKLK*
Ga0070732_1000006922	3300005542	Surface Soil	VAGEPKTEMEKTLRAMLLVSLESMKQKQQIAILDKSGFGQSEIAEVVGSTPKAVSVRLAEIRKEARKNQKK*
Ga0070732_100110304	3300005542	Surface Soil	VAEEPRTELEKSLRALLLVSLEPLSQKQQIVILDKAGFRPSEIATVIGSTSNTVNVRLSEIRKRARNGKSN*
Ga0070732_100214976	3300005542	Surface Soil	MGEEPKTELEKSLRALLLVNLEPLKQKQQITILDKAGFGQSEIAVVVGSTPKAVSVRLAEIRKESRKGKSK*
Ga0066695_100756941	3300005553	Soil	VAGEPKTEMEKTLRALLLVSLASMKQKQQIAILDKAGFGQSEIATVIGSTSNSVSVRLAE
Ga0070764_103204992	3300005712	Soil	MAEEPKTELEKSMRALLLVNLEPLKQKQQITILDKAGFGQSEIAVVVGSTPKAVSVRLAEIRKESRKGKSK*
Ga0070764_103372762	3300005712	Soil	VAEEPKTELEKTLRALLLVSLDSLKQKPQIALLDKAGFGPSEIATMIGSTSNAVNVRLSEIRKEARKNQKK*
Ga0070717_110390251	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VEEEADDSALEKTLRALLLVNLQSMKQKQQIAILDQAGFRQSEIAEVVGSTPKAVSVRLAEIRKEKRNNQKK*
Ga0066651_102655734	3300006031	Soil	GSRGCCVAGEPKTEMEKTLRALLLVSLASMKQKQQIAILDKAGFGQSEIATVIGSTSNSVSVRLAEIRKEARKGKSE*
Ga0075028_1008221732	3300006050	Watersheds	VAEGAKTELDKTLRALLLVNLGSLKQKQQIAILDKAGFGQSEIADVVDSTPEAVSVRLAEIRKEARKERDHKSK*
Ga0075029_1000288483	3300006052	Watersheds	MAEEPKTELEKSLRALLLVNLEPLKQKQQITILDKAGFGQTEIAEVVGSTPKAVSVRLAEIRKEARKGTSK*
Ga0075029_1006786131	3300006052	Watersheds	TELEKSLRALLLVNLEPLKQKQQITILDKAGFGQSEIAVVVGSTPKAVSVRLAEIRKESRKGKSK*
Ga0066658_100732392	3300006794	Soil	MAEEPKTELEKSLRGLLLINLEPLKQKQQITILDKAGFGQSEIAEVVGSTPKAVSVRLAEIRKEARKSKTK*
Ga0066659_116949902	3300006797	Soil	MAEEPKTEMEKTLRALLLVSLDSMKQRQQIAILDKAGFGQSEIAAVIGSTPKAVSVRLAEIRKEARKGKSK*
Ga0073928_100546394	3300006893	Iron-Sulfur Acid Spring	VAAEVKSELEKTLKALLLISLESMKQKQQITTLDKAGFGPSEIAAMIGSTSNTVNVRLSEIRKAARKNKK*
Ga0099830_111789833	3300009088	Vadose Zone Soil	VAEEPKTELEKSLRALLLVSLDPLKQKQQIVILDKAGFGPSEIATVIGSTSNTVNVRLSE
Ga0066709_1001369342	3300009137	Grasslands Soil	MEKTLRALLLVSLASMKQKQQIAILDKAGFGQSEIATVIGSTSNSVSVRLAEIRKEARKGKSE*
Ga0116128_10493792	3300009518	Peatland	MAEEPKTELEKSLRALMLVNLEPLKQKQQITILDKAGCGQSEIAEVVGSTPKAVSVRLAEIRKEARKGKSK*
Ga0116102_11744651	3300009632	Peatland	SRILRSGGQKIHMAEEPKTELEKSLRALMLVNLEPLKQKQQITILDKAGCGQSEIAEVVGSTPKAVSVRLAEIRKEARKGKSK*
Ga0074046_100066915	3300010339	Bog Forest Soil	VAGDAKTELDKTLRALLLLNLGEMKQKQQIAILDKAGFGQSEIAEVVGSTPKAVSVRLAEIRREARKNNKK*
Ga0074046_107139052	3300010339	Bog Forest Soil	MAKVAKTELEMTLRALLLVNLESLSQKQQIAILDKAGFGQSEIAGVVGSTPKAVSVRLAEIRKVAR*
Ga0137391_106474222	3300011270	Vadose Zone Soil	MAEEAKASVLEKTLKALLLVNLDPMKQKQQITILDKAGFGQSDIAEVVGSTPKAVSVRLAEIRKEARKGKSK*
Ga0137393_102908792	3300011271	Vadose Zone Soil	VAEEPKTELEKSLRALLLVSLDPLKQKQQIVILDKAGFGPSEIATVIGSTSNTVNVRLSEIRKHARKGKLK*
Ga0137380_115021512	3300012206	Vadose Zone Soil	VAEEPKTELEKSLRALLLVSLDPLKQKQQIMILDKAGFGPSEIATVIGSTPNTVNVRLSEIRKGARKGKSK*
Ga0137377_104769051	3300012211	Vadose Zone Soil	VAEEPKTELEKSLRALLLVSLDPLKQKQQIMILDKAGFGPSEIATVIGSTPNTVNVRLSEIRK
Ga0137395_101301214	3300012917	Vadose Zone Soil	MAEEAKASVLEKTLKALLLVNLDSMKQRQQITILDKAGFGQSDIAEVVGSTPKAVSVRLAEIRKEARKGKSK*
Ga0137413_107923062	3300012924	Vadose Zone Soil	MAEEPKTELEKSLRALVLVNLEPLKQKQQITILDKAGFGQSEIAVVVGSTPKAVSVRLAEIRRESRKGKSK*
Ga0153915_109462573	3300012931	Freshwater Wetlands	VAGEPKTELDKTLRALLLVNLESMKQKQQIAILDQAGFGQSEIAEVVASTPKAVSVRLAEIRKEKRENHKK*
Ga0137410_102272863	3300012944	Vadose Zone Soil	MGKTLRALLLVSLDSMKQKPQIAILDKAGFGQSEIVEVIGSTPKAVSVRLAEIRKEARKGKSK*
Ga0157372_125560261	3300013307	Corn Rhizosphere	MGEEPKTELEKSLRALLLVNLEPLKQKQQITILDKAGFGQSEIAVVVGSTPKAVSVRLAEIRKESREGKSK*
Ga0181518_105926412	3300014156	Bog	MAEEPKTELEKSLRALLLVNLEPLKQKQQITILGKAGFGQSEIAVVVGSTPKAVSVRLAEIRKESRRGKSK*
Ga0182013_100762373	3300014492	Bog	VAEEPKTEMEKTLRALLLVSLESMKQKEQIAILDKAGFGQSDIAGVIGSTPKAVSVRLAEIRKEARKNQKK*
Ga0182016_103453522	3300014493	Bog	MAEEQKTELEKSLRALLLVNLEPLKQKQQITILDKAGFGQSEIAEVVGSTPKAVSVRLAEIRKEARKGTSK*
Ga0182024_111321902	3300014501	Permafrost	VAEEPKTEMENTLRALLLVSLESMKQKQQIAILDKAGFGQSEIAGVIGSTPKAVSVRLAEIRKETRKNQKK*
Ga0181536_101797391	3300014638	Bog	MAEEPKTELEKSLRALLLVNLEPLKQKQQITILGKAGFGQSEIAVVVGSTPKAVSVRLAE
Ga0181516_100133383	3300014655	Bog	MAEEAKTDQEKTLRALLLINLEGIKQKPQIAILDKAGFGQSEIAEIVGSTPKAVSVRLAEIRREVRSGKSK*
Ga0182030_100886973	3300014838	Bog	MSENLNESALEKTLRALLLIKMDSMKQREQIALLDKAGFGQSEIARCVGSTPGAVSVRLAEIRKKPRTSRGRNSK*
Ga0182030_105686141	3300014838	Bog	VAEEPKTELEKSLRALMLVSLEPLSQKQQIVILDKAGFGPSEIATVIGSTSNTVNVRLSEIRKRARKGKSK*
Ga0137418_100653155	3300015241	Vadose Zone Soil	MSCTLRALLLVNLGPLKQKQQITILDKAGFGQSEIAEVVGSTPKAVSVRLSEIRKEARKGKSK*
Ga0181500_10361395	3300016728	Peatland	MAEEAKTDQEKTLRALLLINLEGIKQKPQIAILDKAGFGQSEIAEIVGSTPKAVSVRLAEIRREVRSGKSK
Ga0187856_10102257	3300017925	Peatland	MAEEPKTELEKSLRALMLVNLEPLKQKQQITILDKAGCGQSEIAEVVGSTPKAVSVRLAEIRKEARKGKSK
Ga0187825_103370952	3300017930	Freshwater Sediment	MAEEPKTELEKSLRALLLVNLEPLKQKQQIIILDKAGFGQSEIAEVVGSTPKAVSVRLAEIRKEARKGQSK
Ga0187803_104707422	3300017934	Freshwater Sediment	MAEEPKTELGKSLRALLLVNLEPLKQKQQITILDRAGFGQSEIAEVVGSTPEAVSVRLAE
Ga0187853_100211373	3300017940	Peatland	MAEEPKTELEKSLRALMLVNLQPLKQKQQITILDKAGCGQSEIAEVVGSTPKAVSVRLAEIRKEARKGKSK
Ga0187781_114526432	3300017972	Tropical Peatland	VAEETKTELEKTLRALLLVSIESLRQKPQIAILDKAGFGQSDIAEIIGSTPKAVSVRLAEIRKQARKGKSK
Ga0181520_103688273	3300017988	Bog	MAQESSELALEKTLRALLLVNLDSMKQRQQIAILDRAGFGQSEIAKVVGSTPKAVSVRLAEIRRGAKRAPTK
Ga0187880_13756832	3300018016	Peatland	MAEEPKTELEKSLRALMLVNLEPLKQKQQITILDKAGCGQSEIAEVVGSTPKAVSVLLAEIRKEARKGKSK
Ga0187864_100626471	3300018022	Peatland	EEPKTELEKSLRALMLVNLEPLKQKQQITILDKAGCGQSEIAEVVGSTPKAVSVRLAEIRKEARKGKSK
Ga0187890_102821492	3300018044	Peatland	VAEEPKTELEKSLRALLLVGLDPLKQQEQIMILHKAGFGPSEIATVIGSTSNTVNVRLSEIRKRARKGKSK
Ga0187890_105874591	3300018044	Peatland	VAEEANGGALEKTLRALLLIKMDSMKQKEQIALLEKAGFGQSEIARCVGSTPGAVSVRLAKIRRERKRDRKSK
Ga0187784_100444993	3300018062	Tropical Peatland	VAGEPKTELDKTLRALLLVTLESMKQKQQIAILDQAGFGQSEIAEIVSSTPKAVSVRLAEIRKEKRTNRKR
Ga0187770_101832413	3300018090	Tropical Peatland	VAGEVKTDLDKTLRALLLLNLGEMKQKQQIAILDKAGFGQSEIAEVVGSTSKAVSVRLAEIRREARRK
Ga0066667_101014983	3300018433	Grasslands Soil	VAGEPKTEMEKTLRALLLVSLASMKQKQQIAILDKAGFGQSEIATVIGSTSNSVSVRLAEIRKEARKGKSE
Ga0210407_101623552	3300020579	Soil	MAEESKTELEKSLRALLLVNLEPLKQKQQITLLDKAGFGQSEIALVVGSTPKAVSVRLAEIRKESRKGKSK
Ga0210403_103999811	3300020580	Soil	MECYVEKENKANGSLERTLRALLLVSLDSMKQRQQIMILDKAGFGQSEIAEIVGSTPNAVSVRHAEIRKEARERRKTR
Ga0210399_100131226	3300020581	Soil	VEKENKANGSLERTLRALLLVSLDSMKQRQQIMILDKAGFGQSEIAEIVGSTPNAVSVRHAEIRKEARERRKTR
Ga0210399_100396803	3300020581	Soil	MAEEAKASVLEKTLKALLLVNLEPMKQKQQITILDKAGFGQSDIAEVVGSTPKAVSVRLAEIRKEARKGKSK
Ga0210395_102408752	3300020582	Soil	MSENLNESALEKTLRALLLIKMDSMKQREQIALLDKAGFGQSEIARCVGSTPGAVSVRLAEIRRKPRTSRGRNSK
Ga0210401_101241375	3300020583	Soil	MAEEPKTELEKSLRALLLVNLEPLKQKQQITILDKAGFGQSEIAGVVGSTPKAVSVRLAEIRKEARKGKLK
Ga0210401_112810512	3300020583	Soil	VADEANGSALEKTLRALLLIQMESMKQKQQIALLDKAGFGQSEIARAVGSTPGAVSVRLAEIRREARKNRGRNKE
Ga0210401_114315052	3300020583	Soil	VAEEARELEKTLKALLLVNLGPLKQRQQITILDKAGFGQSEIANVIGSTPKAVSVRLAEIRKETRKERNHKSN
Ga0210406_100538526	3300021168	Soil	MAEEPKTELEKSLRALLLVNLEPLKQKQQIIILDKAGFGQSEIAVVVGSTPKAVSVRLAEIRKEARKGQSK
Ga0210406_102874515	3300021168	Soil	LRFRISESMECYVEKENKANGSLERTLRALLLVSLDSMKQRQQIMILDKAGFGQSEIAEIVGSTPNAVSVRHAEIRKEARERRKTR
Ga0210405_1000509810	3300021171	Soil	VAAEVKSELEKTLKALLLISLESTKQKQQITTLDKAGFGPSEIAAMIGSTSNTVNVRLSEIRKAARKNKK
Ga0210388_100822945	3300021181	Soil	MAEEAKASVLEKTLKALLLVNLDTMKQKQQITILDKAGFGQSDIAEVVGSTPKAVSVRLAEIRKEARKGKSK
Ga0210388_102700473	3300021181	Soil	VAEEANTEMEKTLRAMLLVSLDSLKQRQQIAILDKAGFGPSEIAAVIGSTSNAVSVRLSEIRKGARRNQKR
Ga0210388_112246912	3300021181	Soil	MAEEPKTELQKSLRALLLVNLEPLKQKQQITVLDKAGFGQSEIAEVVGSTPRAVSVRLAEIRKEARKGKSK
Ga0210393_114892293	3300021401	Soil	ESEIRGKNSLERTLRAMLLVGLDSMKQREQIRILDKAGFGQSEIAEIVGSTPKAVSVRLAEIRRETRKDRKTK
Ga0210394_100370032	3300021420	Soil	VESEIRGKNSLERTLRAMLLVGLDSMKQREQIRILDKAGFGQSEIAEIVGSTPKAVSVRLAEIRRETRKDRKTK
Ga0210394_100422137	3300021420	Soil	VADEANGSALEKTLRALLLVNLEPLKQKQQIAILDQAGFGRTEIAEVVGSTPNAVGVRLAEIKKDKRKNQKK
Ga0210394_111306981	3300021420	Soil	EVKSELEKTLKALLLISLESMKQKQQITTLDKAGFRPSEIAAMISSTSNTVNVRLSEIRKEARKNKK
Ga0210384_110466352	3300021432	Soil	MAEEAKKTEMEKTLRAMLLVSLDSLKQRQQIAILDKAGFGPSEIATVIGSTSNAVNVRLLEIRKEARKNQKK
Ga0210384_117371303	3300021432	Soil	EPKTELEKSLRALLLVNLEPLKQKQQITILDKAGFGQSEIAGVVGSTPKAVSVRLAEIRKEARKGKLK
Ga0210391_102141701	3300021433	Soil	VAEEPKTELEKTLRALLLVSLDPMKQKQQITILDKAGFGQSEIATVIGSTPNAVSVRLAEIRKEARKGKSK
Ga0210391_110835512	3300021433	Soil	VAAEVKSELEKTLKALLLISLESMKQKQQITTLDKAGFRPSEIAAMISSTSNTVNVRLSEIRKEARKNKK
Ga0210392_105355182	3300021475	Soil	VSEKTKPELDKTLKAMLLVSLGSLKQKQKIAILDRAGFGQSEIADVVSSTPKAVSVRLAEIRKEARKGQSRKSK
Ga0210398_108781073	3300021477	Soil	VAAEVKSELEKTLKALLLISLESMKQKQQITILDKANFGPSEIAAMIGSTSNTVNVRLSEIRKEARKNKK
Ga0212123_100315416	3300022557	Iron-Sulfur Acid Spring	VAAEVKSELEKTLKALLLISLESMKQKQQITTLDKAGFGPSEIAAMIGSTSNTVNVRLSEIRKAARKNKK
Ga0224545_10450693	3300022881	Soil	RGLDVAEEPKTEMENTLRALLLVSLESMKQKQQIAILDKAGFGQSEIAGVIGSTPKAVSVRLAEIRKETRKNQKK
Ga0207700_117580491	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	PILKRTGGRVAGEPKGKALEKTLKALLLINLESMKQKQQIAILDKGGFGQSEIAEVVGSTPKAVSVRLAEIRKEARKGKSK
Ga0207677_121613171	3300026023	Miscanthus Rhizosphere	VAEKPKTELEKSLRALLLVSLDPLRQKQQIIILDKAGFGPSEIATVIGSTSNTVNVRLSEVRKEARKGKSK
Ga0179587_110395391	3300026557	Vadose Zone Soil	MAEEPKTELEKVLRALLLVNLEPLKQRQQITILDKAGFGQSEIAEVVGSTPKAVSVRLAEIRKEARKGKSK
Ga0209220_11744942	3300027587	Forest Soil	MAEEPKTELEKSLRALLLVNLEPLKQKQQITILDKAGFGQSEIAVVVGSTPKAVSVRLAEIRKESRKGKSK
Ga0209117_10528693	3300027645	Forest Soil	MAEEPKTELEKSLRALLLVNLGPLKQKQQITILDKAGFGQSEIAEVVGSTPKAVSVRLSEIRKEARKGKSK
Ga0209420_11581701	3300027648	Forest Soil	ELEKSLRALVLVSLEPLKQKQQITILDKAGFGQSEIAEVVGSTPKAVSVRLAEIRKEARKGKSK
Ga0209580_10000034135	3300027842	Surface Soil	VAGEPKTEMEKTLRAMLLVSLESMKQKQQIAILDKSGFGQSEIAEVVGSTPKAVSVRLAEIRKEARKNQKK
Ga0209580_100153422	3300027842	Surface Soil	VAEEPRTELEKSLRALLLVSLEPLSQKQQIVILDKAGFRPSEIATVIGSTSNTVNVRLSEIRKRARNGKSN
Ga0209579_100008173	3300027869	Surface Soil	VPMAEEPRTELEKSLRALLLVNLEPLRQKQQIAILDKAGFGQSEIAEVVGSTPKAVSVRLAEIRKEAREGKSK
Ga0209579_100308535	3300027869	Surface Soil	VAGEPKTEMEKTLRALLLVSLDSLKQKPQIAILDKAGFGQSEIAEVIGSTPKAVSVRLAEIRKEARKGKLK
Ga0209169_105572682	3300027879	Soil	VAEEPKTELEKTLRALLLVSLDSLKQKPQIALLDKAGFGPSEIATMIGSTSNAVNVRLSEIRKEARKNQKK
Ga0209624_105742471	3300027895	Forest Soil	SGGQKIHMAEEPKTELEKSMRALLLVNLEPLKQKQQITILDKAGFGQSEIAVVVGSTPKAVSVRLAEIRKESRKGKSK
Ga0209698_100847386	3300027911	Watersheds	MAEEPKTELEKSLRALLLVNLEPLKQKQQITILDKAGFGQTEIAEVVGSTPKAVSVRLAEIRKEARKGTSK
Ga0302156_102392462	3300028748	Bog	MSENLNESALEKTLRALLLIKMDSMKQREQIALLDKAGFGQSEIARCVGSTPGAVSVRLAEIRKKPRTSRGRNSK
Ga0302278_101625852	3300028866	Bog	MSENLNESALEKTLRALLLIKMDSMKQREQIALLDKAGFGQSEIARCVGSTPGAVSVRLAEIRKKPRT
Ga0222749_103483832	3300029636	Soil	MAEEAKKTEMDKTLRAMLLVSLDSLKQRQQIAILDKAGFGPSEIATVIGSTSNAVNVRLLEIRKEARKNQKK
Ga0247275_11717661	3300029817	Soil	GQKIHMAEEPKTELEKSLRALMLVNLEPLKQKQQITILDKAGCGQSEIAEVVGSTPKAVSVRLAEIRKEARKGKSK
Ga0311329_105510612	3300029907	Bog	MSENLNESALEKTLRALLLIKMDSMKQREQIALLDKAGFGQSEIARCVGSTPGAVSVRLAEIRKKP
Ga0302280_12093071	3300029985	Fen	MSENLNESALEKTLRALLLIKMDSMKQREQIALLDKAGFGQSEIARCVGSTPGAVSVRLAEIRKKPRTSR
Ga0311339_102066212	3300029999	Palsa	VAEEVNGSALEKTLRALLLIQMESMKQKQQIALLDKAGFGPSEIARAVGSTPGAVSVRLAELRKEGLKNRGRNKE
Ga0311338_118251413	3300030007	Palsa	SRSGGQRKPVAEEAKTELEKSLRALLLVSLDPLKQKQQIAILNKAGFGPSEIATVIGSTPNTVNVRLSEIRKGARKGKSK
Ga0265746_10507862	3300030815	Soil	MAEKLNESALEKTLRALLLIKMETMKQREQIALLDKAGFGQSEIAQCVGSTPGAVSVRLAEIRRKTRTSRGRNSK
Ga0170834_1105722972	3300031057	Forest Soil	MAEEPKTELEKSLRALLLVNLEPLKQKQQITILDKAGFGQSEIAEVVGSTPKAVSVRLAEIRKESRKGKSK
Ga0302325_106969065	3300031234	Palsa	PVAEEAKTELEKSLRALLLVSLDPLKQKQQIAILNKAGFGPSEIATVIGSTPNTVNVRLSEIRKGARKGKSK
Ga0302324_1001635906	3300031236	Palsa	VAEEAKTELEKSLRALLLVSLDPLKQKQQIAILNKAGFGPSEIATVIGSTPNTVNVRLSEIRKGARKGKSK
Ga0302324_1029078622	3300031236	Palsa	VAEEPKTEMEKTLRALLLVSLESMKQKEQIAILDKAGFGQSDIAGVIGSTPKAVSVRLAEIRKEARKNQKK
Ga0310686_1197317044	3300031708	Soil	VAGEAKTEVEKTLRAMLLVSLDSMKQKQQIAVLDKAGFGQSEIADVVGSTPKAVSVRLAEIRKEARKGK
Ga0307476_100430596	3300031715	Hardwood Forest Soil	VAEETRTELEKSLRALLLVSLEPLKQKQQIVILDKAGFRPSEIAAVIGSTPNTVNVRLSEIRKHARKGKSN
Ga0335085_100190586	3300032770	Soil	MAEEPKTELEKSLRALLLVNLEPLKQKQQINILDKAGFGQSEIAAVVGSTPKAVSVRLAEIRKEARKGKLK
Ga0335085_100319239	3300032770	Soil	MAEEPKDSALEKTLRALLLIKMDSMKQKQQIALLDKAGFGQSEIAQTVGSTPGAVSVRLAEIRREARKNRGRNKE
Ga0335085_100591499	3300032770	Soil	VAEGTNGNALEKTLRALLLIQMDSMKQKEQIALLDKAGFGQSEIARCIGSTPGAVSVRLAEIRRGHRVQNRKRK
Ga0335085_122165921	3300032770	Soil	VAEGAKTELEKTLRALLLVNLEPLKQKQQIAILNQAGFGQSEIAEVIRSTPKAVSVRLAEIRRGARTNSKK
Ga0335078_118816321	3300032805	Soil	VAEEVNGSALEKTLRALLLIQMESMKQKQQIALLDKAGFGPSEIARAVGSTPGAVRVRLAELRKEGRKNRGRNKE
Ga0335081_102242043	3300032892	Soil	MAEEPKAELEKSLRALLLVNLEPLKQKQQITILDKAGFGQSEIAVVVGSTPKAVSVRLAEIRKEARKRKSR
Ga0335081_105992851	3300032892	Soil	SKFQTYANTGCCMAKEPNEHALEKTLRALLLINLDSMKQRPQITILDKAGFGQSEIAEMIDSTPKAVSVRLAEIRKEARKNRKTK
Ga0335072_115287702	3300032898	Soil	VAEEANGNAMEKTLRALLLIQMDSMKQKEQIALLDKAGFGQSEIARCVGSTPGAVSVRLAEIRRGRKVQDRKKK
Ga0335083_107407582	3300032954	Soil	VAEGTNGNALEKTLRALHLIQMDSMKQKEQIALLDKAGFGQSEIARCIGSTPGAVSVRLAEIRRGHRVQNRKRK
Ga0335077_110869942	3300033158	Soil	MAKEPNEHALEKTLRALLLINLDSMKQRPQITILDKAGFGQSEIAEMIDSTPKAVSVRLAEIRKEARKNRKTK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062620

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences