NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F062623

Metagenome / Metatranscriptome Family F062623

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F062623
Family Type Metagenome / Metatranscriptome
Number of Sequences 130
Average Sequence Length 56 residues
Representative Sequence MRVIDCPCGHRLEGADDDELFRLAREHVDRDHPEMQRSDEQLRERVAADAYDG
Number of Associated Samples 110
Number of Associated Scaffolds 130

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 73.85 %
% of genes near scaffold ends (potentially truncated) 30.77 %
% of genes from short scaffolds (< 2000 bps) 79.23 %
Associated GOLD sequencing projects 104
AlphaFold2 3D model prediction Yes
3D model pTM-score0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (97.692 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(16.923 % of family members)
Environment Ontology (ENVO) Unclassified
(30.769 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.231 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 32.10%    β-sheet: 12.35%    Coil/Unstructured: 55.56%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.75
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.16.1.1: GMC oxidoreductasesd1ju2a21ju20.68747
c.45.1.0: automated matchesd2i1ya_2i1y0.67967
d.16.1.1: GMC oxidoreductasesd3qvpa23qvp0.64571
c.108.1.0: automated matchesd6ddba_6ddb0.63657
d.16.1.1: GMC oxidoreductasesd1kdga21kdg0.63027

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 130 Family Scaffolds
PF02635DrsE 19.23
PF13847Methyltransf_31 18.46
PF06348DUF1059 15.38
PF08241Methyltransf_11 6.15
PF07690MFS_1 6.15
PF00581Rhodanese 6.15
PF01022HTH_5 5.38
PF00501AMP-binding 1.54
PF00753Lactamase_B 1.54
PF02771Acyl-CoA_dh_N 0.77
PF01512Complex1_51K 0.77
PF16697Yop-YscD_cpl 0.77
PF12840HTH_20 0.77
PF01206TusA 0.77
PF13649Methyltransf_25 0.77
PF00814TsaD 0.77
PF00685Sulfotransfer_1 0.77
PF04140ICMT 0.77

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 130 Family Scaffolds
COG0425Sulfur carrier protein TusA (tRNA thiolation, molybdenum cofactor biosynthesis)Translation, ribosomal structure and biogenesis [J] 0.77
COG0533tRNA A37 threonylcarbamoyltransferase TsaDTranslation, ribosomal structure and biogenesis [J] 0.77
COG1214tRNA A37 threonylcarbamoyladenosine modification protein TsaBTranslation, ribosomal structure and biogenesis [J] 0.77
COG1894NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit (chain F)Energy production and conversion [C] 0.77
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.77
COG4656Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunitEnergy production and conversion [C] 0.77

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.69 %
UnclassifiedrootN/A2.31 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_108310733All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria710Open in IMG/M
3300002568|C688J35102_120989834All Organisms → cellular organisms → Bacteria14352Open in IMG/M
3300004081|Ga0063454_100989520All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria675Open in IMG/M
3300004081|Ga0063454_101990486All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300004156|Ga0062589_102546124All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300005178|Ga0066688_10829574All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300005179|Ga0066684_10579507All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria753Open in IMG/M
3300005186|Ga0066676_10443286All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales879Open in IMG/M
3300005445|Ga0070708_100726911All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria934Open in IMG/M
3300005445|Ga0070708_102015226All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300005471|Ga0070698_101281733All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria683Open in IMG/M
3300005529|Ga0070741_10001127All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria85069Open in IMG/M
3300005529|Ga0070741_10013019All Organisms → cellular organisms → Bacteria14832Open in IMG/M
3300005540|Ga0066697_10699663All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales555Open in IMG/M
3300005556|Ga0066707_10277030All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1097Open in IMG/M
3300005562|Ga0058697_10003850All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD00594828Open in IMG/M
3300005569|Ga0066705_10747434All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria586Open in IMG/M
3300005569|Ga0066705_10976615All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria502Open in IMG/M
3300005764|Ga0066903_101958660All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1124Open in IMG/M
3300005840|Ga0068870_10620804All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria737Open in IMG/M
3300005937|Ga0081455_10566403All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium748Open in IMG/M
3300006791|Ga0066653_10445024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium661Open in IMG/M
3300006800|Ga0066660_10916071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria713Open in IMG/M
3300006847|Ga0075431_100013059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria8388Open in IMG/M
3300006852|Ga0075433_10109650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD00592449Open in IMG/M
3300006854|Ga0075425_100125759All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD00592928Open in IMG/M
3300006904|Ga0075424_101249857All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300007076|Ga0075435_100777954All Organisms → cellular organisms → Bacteria833Open in IMG/M
3300007982|Ga0102924_1107224All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium1391Open in IMG/M
3300009088|Ga0099830_10870093All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium745Open in IMG/M
3300009094|Ga0111539_11884556All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli693Open in IMG/M
3300009137|Ga0066709_100314015All Organisms → cellular organisms → Bacteria2136Open in IMG/M
3300009137|Ga0066709_101179720All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1127Open in IMG/M
3300009137|Ga0066709_102845786All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium640Open in IMG/M
3300009789|Ga0126307_10092206All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD00592395Open in IMG/M
3300009789|Ga0126307_10161870All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD00591793Open in IMG/M
3300009789|Ga0126307_10185627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD00591668Open in IMG/M
3300009823|Ga0105078_1036509All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium617Open in IMG/M
3300010037|Ga0126304_10386631All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300010039|Ga0126309_11066400All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300010040|Ga0126308_10128286All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium1583Open in IMG/M
3300010040|Ga0126308_10220032All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium1226Open in IMG/M
3300010044|Ga0126310_10041685All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2493Open in IMG/M
3300010045|Ga0126311_11439966All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria576Open in IMG/M
3300010127|Ga0127489_1021530All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria912Open in IMG/M
3300010304|Ga0134088_10306562All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium768Open in IMG/M
3300010329|Ga0134111_10396471All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria590Open in IMG/M
3300010335|Ga0134063_10317883All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria752Open in IMG/M
3300010895|Ga0138113_128441All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium665Open in IMG/M
3300010999|Ga0138505_100029237All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300011994|Ga0120157_1041536All Organisms → cellular organisms → Bacteria1018Open in IMG/M
3300012010|Ga0120118_1053634All Organisms → cellular organisms → Bacteria1012Open in IMG/M
3300012042|Ga0136627_1042305All Organisms → cellular organisms → Bacteria1639Open in IMG/M
3300012204|Ga0137374_10003766All Organisms → cellular organisms → Bacteria17985Open in IMG/M
3300012204|Ga0137374_10023091All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales6994Open in IMG/M
3300012204|Ga0137374_10030512All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales5901Open in IMG/M
3300012204|Ga0137374_10049501All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales4346Open in IMG/M
3300012204|Ga0137374_10145687All Organisms → cellular organisms → Bacteria2125Open in IMG/M
3300012212|Ga0150985_120212059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli520Open in IMG/M
3300012350|Ga0137372_10077565All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2838Open in IMG/M
3300012350|Ga0137372_10214592All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1532Open in IMG/M
3300012353|Ga0137367_10134858All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1808Open in IMG/M
3300012353|Ga0137367_10254879All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1261Open in IMG/M
3300012354|Ga0137366_11070035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria557Open in IMG/M
3300012355|Ga0137369_10050239All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3654Open in IMG/M
3300012356|Ga0137371_10706262All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300012356|Ga0137371_11104979All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria596Open in IMG/M
3300012358|Ga0137368_10016923All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD00597072Open in IMG/M
3300012360|Ga0137375_11304535All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300012395|Ga0134044_1018662All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300012403|Ga0134049_1386265All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1159Open in IMG/M
3300012409|Ga0134045_1320397All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria641Open in IMG/M
3300012532|Ga0137373_10191855All Organisms → cellular organisms → Bacteria1689Open in IMG/M
3300012941|Ga0162652_100034717All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300012972|Ga0134077_10575974All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria507Open in IMG/M
3300012977|Ga0134087_10409752All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales662Open in IMG/M
3300012998|Ga0157362_1176627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria724Open in IMG/M
3300015192|Ga0167646_1001107All Organisms → cellular organisms → Bacteria9749Open in IMG/M
3300018071|Ga0184618_10175005All Organisms → cellular organisms → Bacteria888Open in IMG/M
3300018076|Ga0184609_10000274All Organisms → cellular organisms → Bacteria14649Open in IMG/M
3300018432|Ga0190275_13460122All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059511Open in IMG/M
3300018433|Ga0066667_11406773Not Available613Open in IMG/M
3300018466|Ga0190268_11433789All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300018466|Ga0190268_11665376All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli566Open in IMG/M
3300018468|Ga0066662_10539341All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD00591075Open in IMG/M
3300018468|Ga0066662_11135212All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium784Open in IMG/M
3300018476|Ga0190274_12605060All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059603Open in IMG/M
3300018482|Ga0066669_10936901All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria778Open in IMG/M
3300018920|Ga0190273_10528218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059871Open in IMG/M
3300019255|Ga0184643_1371590All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300019269|Ga0184644_1463704All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria513Open in IMG/M
3300019279|Ga0184642_1298531All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059826Open in IMG/M
3300021081|Ga0210379_10315903All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300021184|Ga0196959_10088057All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli698Open in IMG/M
3300021413|Ga0193750_1007427All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2828Open in IMG/M
3300021860|Ga0213851_1910197All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059627Open in IMG/M
3300021951|Ga0222624_1322646All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059577Open in IMG/M
3300022557|Ga0212123_10174724All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium1625Open in IMG/M
3300025908|Ga0207643_10270150All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD00591052Open in IMG/M
3300025921|Ga0207652_11234106All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059650Open in IMG/M
3300025939|Ga0207665_10538001All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium906Open in IMG/M
3300026528|Ga0209378_1227824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria595Open in IMG/M
3300026552|Ga0209577_10454597All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium888Open in IMG/M
3300027638|Ga0208612_1025264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1864Open in IMG/M
3300027875|Ga0209283_10889695All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium540Open in IMG/M
3300027909|Ga0209382_11267100All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria749Open in IMG/M
3300027909|Ga0209382_11728604All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia612Open in IMG/M
3300028718|Ga0307307_10215687All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium609Open in IMG/M
3300028784|Ga0307282_10538021All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli567Open in IMG/M
3300028799|Ga0307284_10313736All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium631Open in IMG/M
3300028807|Ga0307305_10048923All Organisms → cellular organisms → Bacteria1948Open in IMG/M
3300028824|Ga0307310_10659561All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300028828|Ga0307312_10073554All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2077Open in IMG/M
3300028875|Ga0307289_10102060All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1171Open in IMG/M
3300028881|Ga0307277_10002805All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6716Open in IMG/M
3300028884|Ga0307308_10444973All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria621Open in IMG/M
3300030606|Ga0299906_10539170Not Available890Open in IMG/M
3300030606|Ga0299906_11276393All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium526Open in IMG/M
3300030620|Ga0302046_10041091All Organisms → cellular organisms → Bacteria3772Open in IMG/M
3300031093|Ga0308197_10193502All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300031229|Ga0299913_10001764All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria16432Open in IMG/M
3300031421|Ga0308194_10306215All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria552Open in IMG/M
3300031670|Ga0307374_10039164All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales5227Open in IMG/M
3300031716|Ga0310813_11598735All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059609Open in IMG/M
3300031731|Ga0307405_10751065All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059813Open in IMG/M
3300031824|Ga0307413_10801984All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300031938|Ga0308175_100509194All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD00591281Open in IMG/M
3300032159|Ga0268251_10000008All Organisms → cellular organisms → Bacteria298979Open in IMG/M
3300033433|Ga0326726_11592704All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300034644|Ga0370548_092830Not Available601Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil16.92%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil13.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.23%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil7.69%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil6.92%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.15%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.38%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment3.85%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.08%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.31%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring1.54%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.54%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.54%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.54%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil1.54%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.54%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.54%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave1.54%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.77%
Polar DesertEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert0.77%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.77%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.77%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.77%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.77%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.77%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.77%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.77%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.77%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.77%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.77%
Fungus GardenHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Fungus Garden0.77%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005562Agave microbial communities from Guanajuato, Mexico - As.Ma.eHost-AssociatedOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007982Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009823Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010127Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010895Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010999Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015EnvironmentalOpen in IMG/M
3300011994Permafrost microbial communities from Nunavut, Canada - A7_65cm_12MEnvironmentalOpen in IMG/M
3300012010Permafrost microbial communities from Nunavut, Canada - A7_35cm_12MEnvironmentalOpen in IMG/M
3300012042Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ489 (22.06)EnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012395Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012403Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012409Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012941Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012998Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta laevigata ALBM3Host-AssociatedOpen in IMG/M
3300015192Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2a, rock/snow interface)EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019255Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019269Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019279Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300021184Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20EnvironmentalOpen in IMG/M
3300021413Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1EnvironmentalOpen in IMG/M
3300021860Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021951Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027638Polar desert microbial communities from Antarctic Dry Valleys - UQ889 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300030606Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031670Soil microbial communities from Risofladan, Vaasa, Finland - OX-3EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300032159Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)Host-AssociatedOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300034644Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10831073313300000956SoilPPVLEANATRKEGLAMRAIECPCGHHLEGADDELFRLAREHVDRDHPEMQRSEEEIRARIGNDAYDS*
C688J35102_120989834213300002568SoilMRAIECPCGHHLQAADDETLFRLAREHVDRDHPEMDRIDEQIRERVAADAYDLEPVR*
Ga0063454_10098952023300004081SoilMRGIECPCGHHFEAADDDELFRLCREHVDREHPEMQRTDAQIRERVGGDAYDMQPVA*
Ga0063454_10199048623300004081SoilGHHLEGVDDGQLFRLARDHVHREHPEMQRTDEQLRERVVADAYDVPVAGQTVRPA*
Ga0062589_10254612423300004156SoilCGHRLEGADDDELFRLAREHVDREHPEMQRTDEQLRERITNDAYDI*
Ga0066688_1082957423300005178SoilMRVIDCPCGHRLEGAGDEELFGLAREHVDRDHPEKQRTDEELRQRIAADAYDA*
Ga0066684_1057950723300005179SoilCGHRLEGADDAELFHLAREHIDRDHPEMERTNDQVRERVAADAYDIAPVT*
Ga0066676_1044328623300005186SoilMRAIECPCGHHLEGRDDDELFRLAREHVDRDHPELERSDEQLRARISADAYDVERSEVNV
Ga0070708_10072691123300005445Corn, Switchgrass And Miscanthus RhizosphereMRIIDCPCGHRLEGADDGELFRLAREHVDRDHPEMRRTDQQLWERIRADAYDSN*
Ga0070708_10201522623300005445Corn, Switchgrass And Miscanthus RhizosphereMRAIDCPCGHHFPAANDAQRFRPCREHIDRDHLEMERSDEQIRERVSADAY
Ga0070698_10128173313300005471Corn, Switchgrass And Miscanthus RhizosphereMRVIDCPCGHRLEGVDDEALFQLAREHVDRDHPEMQRTDEQLRERIAADAY
Ga0070741_10001127713300005529Surface SoilMRVIDCPCGHRLEAADDEELFRLAREHVQRDHPELRRSDDEIRARVTADAHDA*
Ga0070741_1001301993300005529Surface SoilMARCIDCPCGHRLTATDDEALFRLARQHVDRDHPEMTRSDAELRARIAADAREA*
Ga0066697_1069966323300005540SoilMRALDCPCGHRLEADDDEQLFRLAREHVDTEHPEMQRTDEEIRARIASDAYDA*
Ga0066707_1027703043300005556SoilMRVIDCPCGHRLEGTDGEELFRLAREHVDRDHPEMQRTDDELRQRVAADAYDA*
Ga0058697_1000385033300005562AgaveMRVIDCPCGHRLEGADDGELFRLAREHVDRDHPEMRRTDAELRQRIAADGYDA*
Ga0066705_1074743423300005569SoilPFDVEGGKMRAIECPCGHHLEGADDAELFRLAREHLDRGHPELQRSDDELRQRIAADAYDA*
Ga0066705_1097661523300005569SoilCGHHLEGADDEELFRLARAHVDTDHPEMQRTDEQLRARVAADAYEV*
Ga0066903_10195866023300005764Tropical Forest SoilMRAIDYPCGHRPEGADDEDLSRLAREHVDTDDFEMQCTTAEFRAGVAAEAYDL*
Ga0068870_1062080423300005840Miscanthus RhizosphereMRAIECPRGHHLEAADDEELLRRCREHVDREHPEMQRTDAQIRERVAADAHAAQPAG*
Ga0081455_1056640323300005937Tabebuia Heterophylla RhizosphereMRAIECPCGHHLEGADDDELFRLAREHVDRDHPELQRTDAQLRERIAADAYDLAPA*
Ga0066653_1044502433300006791SoilHHFEAADDEELFRLCREHVDRDHPEMQRTDDQIRERVAADGYDVEAVA*
Ga0066660_1091607123300006800SoilMRAIDCPCGHRLEGADADEMFRLAREHIDTDHPEMQRTDDQVRERVAADAYDVQQVT*
Ga0075431_10001305973300006847Populus RhizosphereMRAIDCPCGHHFEAADDDELFGLCREHLDRDHCEMQRTDEQLRARIVADAYDVASRAPA*
Ga0075433_1010965033300006852Populus RhizosphereMRAIDCPCGHQFDAADDDELFGLCREHVDRDHPELERTDQQLRARIAADAHDVTSRAPA*
Ga0075425_10012575913300006854Populus RhizosphereMRAIDCPCGHQFDAADDDELFGLCREHVDRDHPELERTDQQLRARIAADAHDVTSR
Ga0075424_10124985713300006904Populus RhizosphereMRAIDCPCGHQFDAADDDELFGLCREHVDRDHPELERTDQQLRARIAADAHDVT
Ga0075435_10077795423300007076Populus RhizosphereMRAIDCPCGHQFDAADDDELFGLCREHVDRDHPELERTDQQLRARIA
Ga0102924_110722413300007982Iron-Sulfur Acid SpringMRAIDCPSGHQLQGADDAELFRLAREHIDTGHPEMKRTDDDVRERVTADAYDMQPFA*
Ga0099830_1087009323300009088Vadose Zone SoilMRAIDCPCGHRLEGADDDELFRLAKAHIASHHPDMERSDEQLRQRVEVDAYDA*
Ga0111539_1188455613300009094Populus RhizosphereMRATTMRAIGHHFESTDDAELFRLCREHGDRDHPEMERTDEQIHDQIAADAYDAVVA*
Ga0066709_10031401523300009137Grasslands SoilMRAIECPCGHHLEGADDKELFRLAREHVDRDHPEMQRSDEEIRERITADAYDVETAR*
Ga0066709_10117972033300009137Grasslands SoilCGHHLEGADDEVLFRLAREHVDRDHPEMQRTDEKLRERVAGDAYELTPTTSKGG*
Ga0066709_10284578623300009137Grasslands SoilMRAIECPCGHHLEGADDAELFRLAREHVDRDHPEMQRSDDELRQRISADAYDV*
Ga0126307_1009220643300009789Serpentine SoilMRAIGCLSGHHFEATDVEELFRRCRERVDRDHPEMARSDEQIRARVPADYH
Ga0126307_1016187033300009789Serpentine SoilMRVIECPCGHHFEAADDEDLFRLCREHMDREHPEMVRSDEQMRARIAADAYDVAPVA*
Ga0126307_1018562723300009789Serpentine SoilMRAIECPCGNPFEVADDEELFRLCHEHVNRDHPEMTRGAEQIRARIAADAYDVAPVA*
Ga0105078_103650923300009823Groundwater SandMRAIECPCGHYLEGADDEELVRIGREHVEAHHPEMERSDEQLRARVAADAYDVVPSS*
Ga0126304_1038663123300010037Serpentine SoilLREEEEMRVIECPCGHHFEAADDEDLFRLCREHMDREHPEMVRSDEQMRARIAADAYDVAPVA*
Ga0126309_1106640023300010039Serpentine SoilVIDQEEAMRAIECPCGHHFEAADDYELFRLCREHVDRDHPGMARSDEQIRDRIAADAYDVATVA*
Ga0126308_1012828623300010040Serpentine SoilMGAIECPCGHHLEGADDDELFRLAHEHVDRDHPEMKRSDDDLRARVAADAYDVAPVA*
Ga0126308_1022003223300010040Serpentine SoilMRAIECPCGNPFEVADDEELFRLCHEHVNRDHPEMTRGAEQIRARIAADAYDVATVA*
Ga0126310_1004168513300010044Serpentine SoilYPCGHHFDATDDELFLRCRDRVDSDHPQMQRTDEQLYARVAADAYEVTAQATG*
Ga0126311_1143996613300010045Serpentine SoilMRAIDGPCGHHFEPADDDELFRLRREHVDNDHPEMQRTDEQLHARIAADAYEVAGLATG*
Ga0127489_102153023300010127Grasslands SoilMRIIDCPCGHRLEGGDDGELFRLAREHVDRDHSEMRRTDQQLWERIRADAYDSN*
Ga0134088_1030656213300010304Grasslands SoilMRAIECPCGHYSEAADDDELFRLAREHVDRDHPELERSDEQLRQRIANDAYD
Ga0134111_1039647113300010329Grasslands SoilMRAIDCPCGHRLEGADDELLRLAREHVDRDHPEMQRTDEELRARIATDAYDVAAVNR*
Ga0134063_1031788313300010335Grasslands SoilMRIIDCPCGHRLEGADDEEPFRLARDHIDRDHPEMPRSDEQIRERVAADAYEA*
Ga0138113_12844113300010895Grasslands SoilMRIIDCPCGHRLGGADDGELFRLAREHVDRDHPEMRRTDQQLWERIRADAYDSN*
Ga0138505_10002923723300010999SoilPAYVYAEDDMRAIECPCGHHFEAADDYELFRLCREHVDRDHPGMERTDEEIRDRIAADAYDIAPVA*
Ga0120157_104153643300011994PermafrostHDTQGLQEEETMRVIDCPCGHRLEGADDDELFRLAREHVDRDHPEMQRSDEEVRERVAADAYDA*
Ga0120118_105363443300012010PermafrostDTQGLQEEETMRVIDCPCGHRLEGADDDELFRLAREHVDRDHPEMQRSDEEVRERVAADAYDA*
Ga0136627_104230533300012042Polar Desert SandMRAIDCPCGHHFEGADDDELFGLCREHVDTDHPEMKRSDEQMRARIVASMRRAVR*
Ga0137374_1000376693300012204Vadose Zone SoilMRAIECPCGHQLEGADDDELFRLAREHVNRDHPELQRSDEEIRARLTNDAYDI*
Ga0137374_1002309123300012204Vadose Zone SoilMLAIDCPCGHHLEAADHLELFRLARDHVDRDHPEMKRTDDQIRDRVAADAYEV*
Ga0137374_1003051263300012204Vadose Zone SoilMLAIDCPCGHHLEAADHLELFRLAREHVDRDHPEMKRTDHKIRDRVAADAYEV*
Ga0137374_1004950173300012204Vadose Zone SoilVRAIECPCGHHLEDADDDELFRLAREHVVRDHSEMQRSEEEIRARIANDAYDI*
Ga0137374_1014568743300012204Vadose Zone SoilMRVIDCPCGHRLEGANDDELFRLAREHVDRDHPEMQRSDEQLRERVAADARDA*
Ga0150985_12021205913300012212Avena Fatua RhizosphereLTEGGAMRAIECPCGHRLEAADDDELFRLCREHVDREHPEMQRTDEQIRERVAADAYDGAPVA*
Ga0137372_1007756543300012350Vadose Zone SoilVRAIECPCGHHLEDADDDELFRLAREHVVRDHPEMQRSEEELRAQIANDAYDI*
Ga0137372_1021459223300012350Vadose Zone SoilMLAIDCPCGHHLEGESTEQLFRLAREHVDRDHPEMERTDEQLRERIAADAYEVASAT*
Ga0137367_1013485823300012353Vadose Zone SoilVRAIECPCGHHLEDADDDELFRLAREHVNRDHPELQRSDEEIRARLTNDAYDI*
Ga0137367_1025487913300012353Vadose Zone SoilSADTTIGGEMLAIDCPCGHHLEAADHLELFRLARDHVDRDHPEMKRTDDQIRDRVAADAYEV*
Ga0137366_1107003523300012354Vadose Zone SoilMRAIDCPCGHHFEGADDEELFRLCREHVDADRSDEQLRERIAADGYEALTVA*
Ga0137369_1005023913300012355Vadose Zone SoilEGLAVRAIECPCGHHLEDADDDELFRLAREHVVRDHPEMQRSEEEIRARIANDAYDI*
Ga0137371_1070626233300012356Vadose Zone SoilMRAIECPCGHHLEGADDDELFRLAREHVDRDHPEMQRSDDDLRRRMAADAYDV*
Ga0137371_1110497923300012356Vadose Zone SoilGAPDQKNREMRVIDCASSHKHEGAGNEGLFGLAREHVDRDHPEKQRTDEELRQRIAADAYDA*
Ga0137368_1001692333300012358Vadose Zone SoilMRAIECPCGHQLEGADDDELFRLAREHVNRDHPELQRSDEEIRARVTNDAYDI*
Ga0137375_1130453513300012360Vadose Zone SoilVKAYRPDRRDAMRAIECPCGHHLEGADDDELFRLAREHVEREHPEMQRTDEQLRERVAADAYDA*
Ga0134044_101866233300012395Grasslands SoilFDLRGGEMRGIDCPCGHHLEGADDAELFRLAREHVDRDHPEVQRSDDDLRGRIAADAYDL
Ga0134049_138626533300012403Grasslands SoilMRIIDCPCGHRLGGADDGELFRLAREHVDRDHPEMWRTDQQLWERFRADAYDSN*
Ga0134045_132039723300012409Grasslands SoilMRIIDCPCGHRLGGAADGELFRLAREHVDRDHPEMRRTDQQLWERIRADAYDSN*
Ga0137373_1019185523300012532Vadose Zone SoilVKAYRPDRRDAMRAIECPCGHHLQGADDDELFRLAREHVEREHPEMQRTDEQLRERVAADAYDA*
Ga0162652_10003471713300012941SoilVIQPEDDMRAIECPCGHHFEAADDYELFRLCREHVDRDHPGMERSDEEIGDRIAADAYDV
Ga0134077_1057597423300012972Grasslands SoilECPCGHHLEGTDDDELFLLAREHVDREHPEMQRTDEQLRERVAADSYEVTAAARR*
Ga0134087_1040975213300012977Grasslands SoilAIDCPCGHKLVAADDEELFKLAREHVDRDHPEMQRTDDQLRERVANDAYDS*
Ga0157362_117662723300012998Fungus GardenMRAIDCPCGHRFEGADDDELFLLCRVHVDADHPETQRTDEQIRQRITADAYDVMAA*
Ga0167646_100110723300015192Glacier Forefield SoilMARIIDCPCGHVLRVADDGALFTLARKHVDEDHPEMKRTDEEVRARVAADARDA*
Ga0184618_1017500523300018071Groundwater SedimentMRAIECRCGHHLEAADDEQLFRLAREHIDRDHPEMQPTDDQIRQRVAADAYDA
Ga0184609_10000274143300018076Groundwater SedimentMRAIDCPCGHHLEGADDDERFRREHISRDHPEMQRTDEQIRERVTKDAYDI
Ga0190275_1346012223300018432SoilVIDQEDDMRAIECPCGHHFEAADDYELFRLCREHVDRDHPGMERTDEEIRDRIAADAYDVATVA
Ga0066667_1140677323300018433Grasslands SoilMRAIDCPCGRRLEGADDDELFQLAREHIASHHPEMQRSDEQLRQRIATDAHDA
Ga0190268_1143378923300018466SoilMRAIECPCGHHFEAADDYGLFRLCREHVNRDHPGMERTDEEIRDRIAADAYDVATVA
Ga0190268_1166537623300018466SoilECPCGHHFEAADDYGLFRLCREHVDRDHPGMERTDEEIRDRIAADASDVATVT
Ga0066662_1053934123300018468Grasslands SoilMRAIDCPCGHRLEGADADEMFRLAREHIDTDHPEMQRTDDQVRERVAADAYDVQQVT
Ga0066662_1113521213300018468Grasslands SoilMKAIDCPCGHRLEGADDDELFRLAREHVDRDHPEMQRTDEQLRERVAADAYDLEPAE
Ga0190274_1260506023300018476SoilMRAIECPCGHHLEAADDYELFRLCREHVDRDHPGMERTDEEIRDRIAADAYDVAPVA
Ga0066669_1093690123300018482Grasslands SoilMRIIDCPCGHRLEGGDDGELFRLAREHVDRDHSEMRRTDQQLWERIRADAYDSN
Ga0190273_1052821823300018920SoilMNDQEGDMRAVDCPCGHHFEAADDYELFRLCREHVDRDHPEMTRSDEQIRERVAADAYDIAPVA
Ga0184643_137159013300019255Groundwater SedimentMRAIECPCGHHFEAAGDDELFRLCSEHVNVDHPEMQRTDDQIRERIAADAYDVAAVA
Ga0184644_146370423300019269Groundwater SedimentMRAIDCPCGHHFEGADDYELFRLCREHLDRDHSEMKRSDEQIFERIVADAYEAAKV
Ga0184642_129853123300019279Groundwater SedimentMAARRQARQTQAGRVNDQEEQMHAIDCPCGHHFEAADDEELFRLCREHVDADQPEMQRSDAQIRERVAADAYAVETVA
Ga0210379_1031590323300021081Groundwater SedimentMARCIDCPCGHVLSGADDEELFQLARKHVDEDHPEMQRTDDEVRARVAADARDE
Ga0196959_1008805723300021184SoilDRPCGHDLQAVDDEELFRLRREHRHREHPEMQRTDVQMRERIAADAYDPEPVA
Ga0193750_100742743300021413SoilVRVIDCPCGHRLEGADDDELFRLAREHVDRDHPEMQRSDEQLRERVAADAYDA
Ga0213851_191019723300021860WatershedsMRAIDCPCGHRVEADDDDELFRLCREHLAGHHPDVRRTDEQIRQRVAADAYEAGVIA
Ga0222624_132264623300021951Groundwater SedimentMRAIDCPCGHRFEAADDDDELFRLFREHVDRDHPGMQRTDEEIRDRIAADAYDAAPVA
Ga0212123_1017472413300022557Iron-Sulfur Acid SpringMRAIDCPSGHQLQGADDAELFRLAREHIDTGHPEMKRTDDDVRERVTADAYDMQPFA
Ga0207643_1027015023300025908Miscanthus RhizosphereMRAIECPRGHHLEAADDEELLRRCREHVDREHPEMQRTDAQIRERVAADAHAAQPAG
Ga0207652_1123410623300025921Corn RhizosphereMRAIECPCGHHLQGADDDELFRLAREHIDRDHPAMQRTDAQVRERIAADVERVAGS
Ga0207665_1053800123300025939Corn, Switchgrass And Miscanthus RhizosphereMRVIDCPCGHRLEGADDDELFRLAREHVDRDHTEMQRTDGELRQRIAADAYDA
Ga0209378_122782413300026528SoilMRVIDCPCGHRLEGTDGEELFRLAREHVDRDHPEMQRTDDELRQRVAADAYDA
Ga0209577_1045459733300026552SoilIECPCGHHLEGADDQALVRLAREHVDRDHPEMQRTDEQLRERVAADAYDVQPAQ
Ga0208612_102526443300027638Polar DesertMRAIDCPCGHHFEGADDDELFGLCREHVDTDHPEMKRSDEQMRARIVASMRRAVR
Ga0209283_1088969513300027875Vadose Zone SoilMRAIDCPCGHRLEGADDDELFRLAKAHIASHHPDMERSDEQLRQRVEVDAYDA
Ga0209382_1126710023300027909Populus RhizosphereMRAIDCPCGHQFDAADDDELFGLCREHVDRDHPELERTDQQLRARIAADAHDVTSRA
Ga0209382_1172860423300027909Populus RhizosphereMRAIDCPFGYRLEGADDEELFRLAREHVDRDHPEPERTDEQLRQRVAADAY
Ga0307307_1021568713300028718SoilMRVIDCPCGHRLEGADDDELFRLAREHVDRDHPEMQRSDEQLRERVAADAYDG
Ga0307282_1053802123300028784SoilDCPCGHHLEGADDAELFRLAREHIDRDHPEMERSDEQIRERVAADAYDAQPIATSP
Ga0307284_1031373613300028799SoilVRRSRHHAQGLQKEETMRVIDCPCGHRLEGADDDELFRLAREHVDRDHPEMQRSDEQLRERVAADAYDG
Ga0307305_1004892343300028807SoilMRVIDCPCGHKLEGADDDELFRLAREHVDRDHPEMQRSDEQLRERVAVDAYDG
Ga0307310_1065956123300028824SoilMRAIECRCGHHLEAADDEQLFRLAREHIDRDHPEMQPTNDQIRQRVAADAYDA
Ga0307312_1007355433300028828SoilMRAIECRCGHHLEAADDEQLFRLAREHIDRDHPEMQPTDDQIRQRVAEDAYGA
Ga0307289_1010206033300028875SoilMRAIDCPCGHQFEAADDDELFGLCRDHPELERTDEQLRARIAADAYDVTSRAPA
Ga0307277_1000280583300028881SoilMRAINCPRGHHIEATDDEELFRLAREHVDRDHPEMQRSDAQIRERVAQTPTVLKEEKQ
Ga0307308_1044497323300028884SoilHNDQRKESKMRAINCPRGHHIEATDDEELFRLAREHVDRDHPEMQRSDEQIRERVAQTPTVLKEEKQ
Ga0299906_1053917013300030606SoilKPWNAERRGSMRAIDCPCGHRVEGGDDGELFRLAKQHIAEDHPDMERTDDQLRERVAADAYEVASA
Ga0299906_1127639313300030606SoilMARIIDCPCGHNLVGGDAEELFRLARERVDHPEMARTDEERRARVAADARDYVEERVKRG
Ga0302046_1004109143300030620SoilMRAIDCPCGHRLEGGDDGELFRLAKQHIAEDHPDMERTDDQLRERVAADAYEVASA
Ga0308197_1019350233300031093SoilGGIMRAIECRCGHHLEAADDEQLFRLAREHIDRDHPEMQPNDDQIRQRVAADAYDA
Ga0299913_10001764133300031229SoilMRAVECPCGHQFEAADDYGLFRLCREHVDRDHPGMERTDEEIRDRIAADAYDVATVA
Ga0308194_1030621523300031421SoilMLAIDCPCGHHFEAADHLELFRLAREHVDRDHPEMKRTDDQLRDRVAADACEV
Ga0307374_1003916423300031670SoilMRAIDCPCGHHFEADSDEALFGLCRDHIDSDHPEMQRTDEQLRERISADAYAFEPAGA
Ga0310813_1159873523300031716SoilMRAIECPCGHHLEGADDEGLFRLAREHIDRDHPEMQRTDEEIRQRVAADAYDLQPVT
Ga0307405_1075106523300031731RhizosphereVIAQEDDMRAIECPCGHHFEAADDYELFRLCREHLDRDHPGMERTDEEIRDRIAADAYDVATVA
Ga0307413_1080198423300031824RhizosphereEDDMRAIECPCGHHFEAADDYELFRLCREHLDRDHPGMERTDEEIRDRIAADAYDVATVA
Ga0308175_10050919423300031938SoilMRGIDCPCGHHFEPTDDEDLFRLCREHVDRDHPEMERANGRLRERIAADAYDAVLA
Ga0268251_10000008813300032159AgaveMRVIDCPCGHRLEGADDGELFRLAREHVDRDHPEMRRTDAELRQRIAADGYDA
Ga0326726_1159270423300033433Peat SoilMARCIDCPCGHVLRGADDEELFRLARKHVDEDHPEMRRTDDEVRARVAADARDA
Ga0370548_092830_355_5373300034644SoilVIQPEDEMRAIECPCGHHFEAAGDYELFRLCREHVDRDHPEMERSDEQIRERVAADAYDA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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