Metagenome / Metatranscriptome Family F062664

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062664
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	56 residues
Representative Sequence	MPGQQTCAPPVIVTLPAQLDAAAAEQAADQITAAFTPGVSVVIADLTAAAC
Number of Associated Samples	113
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	99.19 %
% of genes near scaffold ends (potentially truncated)	90.77 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.923 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.462 % of family members)
Environment Ontology (ENVO)	Unclassified (27.692 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.615 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.72% β-sheet: 0.00% Coil/Unstructured: 82.28%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00293	NUDIX	12.31
PF13683	rve_3	3.85
PF00239	Resolvase	2.31
PF07592	DDE_Tnp_ISAZ013	1.54
PF01526	DDE_Tnp_Tn3	1.54
PF07702	UTRA	1.54
PF00571	CBS	0.77
PF04542	Sigma70_r2	0.77
PF01609	DDE_Tnp_1	0.77
PF00665	rve	0.77
PF12770	CHAT	0.77
PF05066	HARE-HTH	0.77
PF05147	LANC_like	0.77
PF13581	HATPase_c_2	0.77
PF02796	HTH_7	0.77
PF05580	Peptidase_S55	0.77
PF12840	HTH_20	0.77
PF12697	Abhydrolase_6	0.77
PF05257	CHAP	0.77
PF08734	GYD	0.77
PF13193	AMP-binding_C	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	2.31
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	2.31
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	1.54
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.77
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.77
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.77
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.77
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.77
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.77
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.77
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.77
COG3343	DNA-directed RNA polymerase, delta subunit	Transcription [K]	0.77
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.77
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.77
COG4403	Lantibiotic modifying enzyme	Defense mechanisms [V]	0.77
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.77
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.77
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.77
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.77
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.92 %
All Organisms	root	All Organisms	43.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.92 %
cellular organisms	root	All Organisms → cellular organisms	43.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.31 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	36.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.77 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	36.15 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.77 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	32.31 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	1.54 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.77 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.92 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	9.23 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	8.46 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.31 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.31 %
Nitriliruptorales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales	1.54 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.77 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.77 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.77 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.92 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	9.23 %
Catenulisporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae	8.46 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.31 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.31 %
unclassified Nitriliruptorales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales	1.54 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.77 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.77 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.92 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	9.23 %
Catenulispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora	8.46 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.31 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.31 %
Nitriliruptorales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	1.54 %
Pseudomonas aeruginosa group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group	0.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.77 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.77 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.92 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	9.23 %
unclassified Catenulispora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora	8.46 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.31 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.31 %
Nitriliruptorales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	1.54 %
Pseudomonas oleovorans/pseudoalcaligenes group	species subgroup	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas oleovorans/pseudoalcaligenes group	0.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.77 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.77 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.92 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	9.23 %
Catenulispora sp. 13_1_20CM_3_70_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora → Catenulispora sp. 13_1_20CM_3_70_7	8.46 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.31 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.31 %
Nitriliruptorales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	1.54 %
Pseudomonas oleovorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas oleovorans/pseudoalcaligenes group → Pseudomonas oleovorans	0.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.77 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.77 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573003\|GZIR7W401AUSWS	Not Available	520	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101724358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1089	Open in IMG/M
3300004081\|Ga0063454_100339715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	966	Open in IMG/M
3300004479\|Ga0062595_101414317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	635	Open in IMG/M
3300005179\|Ga0066684_10112458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1685	Open in IMG/M
3300005180\|Ga0066685_10521049	Not Available	822	Open in IMG/M
3300005327\|Ga0070658_10471408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1083	Open in IMG/M
3300005337\|Ga0070682_101577443	Not Available	567	Open in IMG/M
3300005338\|Ga0068868_101547388	Not Available	622	Open in IMG/M
3300005338\|Ga0068868_101747593	Not Available	587	Open in IMG/M
3300005367\|Ga0070667_101741059	Not Available	586	Open in IMG/M
3300005435\|Ga0070714_100777147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora → Catenulispora sp. 13_1_20CM_3_70_7	926	Open in IMG/M
3300005435\|Ga0070714_101673402	Not Available	621	Open in IMG/M
3300005435\|Ga0070714_102173993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	540	Open in IMG/M
3300005436\|Ga0070713_100099079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2521	Open in IMG/M
3300005436\|Ga0070713_100203437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1789	Open in IMG/M
3300005437\|Ga0070710_10304842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1040	Open in IMG/M
3300005549\|Ga0070704_101093613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	724	Open in IMG/M
3300005614\|Ga0068856_100784694	Not Available	973	Open in IMG/M
3300006028\|Ga0070717_11917260	Not Available	534	Open in IMG/M
3300006755\|Ga0079222_10083899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1617	Open in IMG/M
3300006755\|Ga0079222_10152826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1315	Open in IMG/M
3300006755\|Ga0079222_11734216	Not Available	600	Open in IMG/M
3300006804\|Ga0079221_10850026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas oleovorans/pseudoalcaligenes group → Pseudomonas oleovorans	662	Open in IMG/M
3300006854\|Ga0075425_102338039	Not Available	594	Open in IMG/M
3300006871\|Ga0075434_100169469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2203	Open in IMG/M
3300009101\|Ga0105247_11270137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora → Catenulispora sp. 13_1_20CM_3_70_7	590	Open in IMG/M
3300009137\|Ga0066709_100810807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1357	Open in IMG/M
3300009174\|Ga0105241_12700314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	500	Open in IMG/M
3300009545\|Ga0105237_11353791	Not Available	718	Open in IMG/M
3300009553\|Ga0105249_12778877	Not Available	561	Open in IMG/M
3300009792\|Ga0126374_10488092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	885	Open in IMG/M
3300010159\|Ga0099796_10437032	Not Available	580	Open in IMG/M
3300010362\|Ga0126377_10159878	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	2124	Open in IMG/M
3300010371\|Ga0134125_12521529	Not Available	559	Open in IMG/M
3300010373\|Ga0134128_10638225	Not Available	1184	Open in IMG/M
3300010373\|Ga0134128_12969586	Not Available	522	Open in IMG/M
3300010376\|Ga0126381_103022876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora → Catenulispora sp. 13_1_20CM_3_70_7	668	Open in IMG/M
3300010396\|Ga0134126_10256225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2068	Open in IMG/M
3300010396\|Ga0134126_11689503	Not Available	695	Open in IMG/M
3300010397\|Ga0134124_10459793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1223	Open in IMG/M
3300012199\|Ga0137383_10494995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	895	Open in IMG/M
3300012212\|Ga0150985_121187790	Not Available	831	Open in IMG/M
3300012349\|Ga0137387_11037790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora → Catenulispora sp. 13_1_20CM_3_70_7	587	Open in IMG/M
3300012350\|Ga0137372_10455853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	958	Open in IMG/M
3300012351\|Ga0137386_10330439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	1097	Open in IMG/M
3300012362\|Ga0137361_11329597	Not Available	643	Open in IMG/M
3300012532\|Ga0137373_10261081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	1394	Open in IMG/M
3300012923\|Ga0137359_11297845	Not Available	616	Open in IMG/M
3300012958\|Ga0164299_10430333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	857	Open in IMG/M
3300012985\|Ga0164308_10345190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1199	Open in IMG/M
3300013105\|Ga0157369_11718465	Not Available	638	Open in IMG/M
3300013105\|Ga0157369_11941725	Not Available	597	Open in IMG/M
3300013306\|Ga0163162_10242268	All Organisms → cellular organisms → Bacteria	1934	Open in IMG/M
3300013307\|Ga0157372_10530902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1372	Open in IMG/M
3300013307\|Ga0157372_12909611	Not Available	548	Open in IMG/M
3300015265\|Ga0182005_1111757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	772	Open in IMG/M
3300015374\|Ga0132255_103800792	Not Available	641	Open in IMG/M
3300016341\|Ga0182035_10974180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	751	Open in IMG/M
3300017972\|Ga0187781_11427677	Not Available	512	Open in IMG/M
3300018061\|Ga0184619_10501558	Not Available	536	Open in IMG/M
3300018431\|Ga0066655_11064665	Not Available	563	Open in IMG/M
3300018468\|Ga0066662_12708989	Not Available	525	Open in IMG/M
3300020069\|Ga0197907_10636455	Not Available	502	Open in IMG/M
3300020140\|Ga0179590_1116549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	724	Open in IMG/M
3300021088\|Ga0210404_10629913	Not Available	610	Open in IMG/M
3300021178\|Ga0210408_10560538	Not Available	906	Open in IMG/M
3300021180\|Ga0210396_11768806	Not Available	500	Open in IMG/M
3300021374\|Ga0213881_10235844	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300021377\|Ga0213874_10363483	Not Available	557	Open in IMG/M
3300021404\|Ga0210389_10809686	Not Available	732	Open in IMG/M
3300021475\|Ga0210392_10245017	Not Available	1268	Open in IMG/M
3300021478\|Ga0210402_11474762	Not Available	607	Open in IMG/M
3300022467\|Ga0224712_10145808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1045	Open in IMG/M
3300024347\|Ga0179591_1067970	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1488	Open in IMG/M
3300025898\|Ga0207692_10150853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1331	Open in IMG/M
3300025898\|Ga0207692_10233645	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300025898\|Ga0207692_10918732	Not Available	576	Open in IMG/M
3300025900\|Ga0207710_10517119	Not Available	620	Open in IMG/M
3300025906\|Ga0207699_11126282	Not Available	581	Open in IMG/M
3300025906\|Ga0207699_11152363	Not Available	574	Open in IMG/M
3300025910\|Ga0207684_10005546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11623	Open in IMG/M
3300025915\|Ga0207693_10391730	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300025915\|Ga0207693_10540325	Not Available	909	Open in IMG/M
3300025916\|Ga0207663_10061300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2386	Open in IMG/M
3300025921\|Ga0207652_11425034	Not Available	596	Open in IMG/M
3300025924\|Ga0207694_11443536	Not Available	581	Open in IMG/M
3300025929\|Ga0207664_10064201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora → Catenulispora sp. 13_1_20CM_3_70_7	2936	Open in IMG/M
3300025929\|Ga0207664_11597347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora → Catenulispora sp. 13_1_20CM_3_70_7	574	Open in IMG/M
3300025949\|Ga0207667_11120108	Not Available	770	Open in IMG/M
3300025961\|Ga0207712_11403739	Not Available	625	Open in IMG/M
3300025981\|Ga0207640_10802343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora → Catenulispora sp. 13_1_20CM_3_70_7	816	Open in IMG/M
3300026088\|Ga0207641_10832697	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300026374\|Ga0257146_1048395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora → Catenulispora sp. 13_1_20CM_3_70_7	689	Open in IMG/M
3300026490\|Ga0257153_1102100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora → Catenulispora sp. 13_1_20CM_3_70_7	569	Open in IMG/M
3300026498\|Ga0257156_1085392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora → Catenulispora sp. 13_1_20CM_3_70_7	656	Open in IMG/M
3300027725\|Ga0209178_1394064	Not Available	525	Open in IMG/M
3300027787\|Ga0209074_10040679	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300028714\|Ga0307309_10013268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1514	Open in IMG/M
3300028720\|Ga0307317_10131336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	838	Open in IMG/M
3300028768\|Ga0307280_10096375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora → Catenulispora sp. 13_1_20CM_3_70_7	979	Open in IMG/M
3300028824\|Ga0307310_10447261	Not Available	646	Open in IMG/M
3300028885\|Ga0307304_10562900	Not Available	526	Open in IMG/M
3300031544\|Ga0318534_10517280	Not Available	681	Open in IMG/M
3300031544\|Ga0318534_10858698	Not Available	509	Open in IMG/M
3300031680\|Ga0318574_10604018	Not Available	643	Open in IMG/M
3300031708\|Ga0310686_112468363	Not Available	569	Open in IMG/M
3300031713\|Ga0318496_10367942	Not Available	794	Open in IMG/M
3300031778\|Ga0318498_10407888	Not Available	604	Open in IMG/M
3300031832\|Ga0318499_10412359	Not Available	516	Open in IMG/M
3300031860\|Ga0318495_10093975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1347	Open in IMG/M
3300031896\|Ga0318551_10536659	Not Available	672	Open in IMG/M
3300031910\|Ga0306923_12351023	Not Available	530	Open in IMG/M
3300031962\|Ga0307479_11762984	Not Available	572	Open in IMG/M
3300032076\|Ga0306924_12039972	Not Available	590	Open in IMG/M
3300032174\|Ga0307470_10409037	Not Available	962	Open in IMG/M
3300032261\|Ga0306920_104232321	Not Available	517	Open in IMG/M
3300032782\|Ga0335082_10847596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	776	Open in IMG/M
3300032828\|Ga0335080_11351852	Not Available	710	Open in IMG/M
3300032895\|Ga0335074_11219096	Not Available	632	Open in IMG/M
3300032955\|Ga0335076_10489313	Not Available	1113	Open in IMG/M
3300033289\|Ga0310914_11502365	Not Available	577	Open in IMG/M
3300033290\|Ga0318519_10543236	Not Available	703	Open in IMG/M
3300033290\|Ga0318519_10564796	Not Available	689	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.00%
Host-Associated	Host-Associated	20.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.23%
Plants	Host-Associated → Plants	20.00%
Aquatic	Environmental → Aquatic	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.92%
Sediment	Environmental → Aquatic → Sediment	0.77%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.77%
Roots	Host-Associated → Plants → Roots	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.92%
Loam	Environmental → Terrestrial → Soil → Loam	17.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.77%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.15%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.08%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.08%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.08%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.54%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.54%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.54%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.54%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.77%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.77%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.77%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.77%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.77%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573003	Grass soil microbial communities from Rothamsted Park, UK - FE2 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FE2_07933160	2189573003	Grass Soil	MPGQETCAPPVIVTLPAQINAATAEQAAEQISAAFTPGVTVVIADLTATACRDC
INPhiseqgaiiFebDRAFT_1017243581	3300000364	Soil	MPGQETCAPPVIVTLPAQVNAATAEQAAGQISAAFTPGVTVVIADLTATACRDCSAIRHLLRAHRKATXRGGQVRFA
Ga0063454_1003397151	3300004081	Soil	MPDQPLRPPVIVTLPAQLDAAAADQVTAAFTPGVSVIIADLTARR
Ga0062595_1014143172	3300004479	Soil	MPGQETCAPPVIVTLPAQINAATAEQAAGQISAAFTPGVTVVIADLT
Ga0066684_101124583	3300005179	Soil	MPGQEICAPPVIVTLPAQINAATAEQAAGQISAAFTPGVTIVIADLTATACRDRSAIRHLLRAHRQATVRG
Ga0066685_105210492	3300005180	Soil	MPDQQTCAPPVIVTLPAQLDAAAAEQAADQITAAFTPGVRVVIADLTAAACCD
Ga0070658_104714081	3300005327	Corn Rhizosphere	MLDQDTCARPVIVTFPAQVTTANAEQAADQIGAAFTPGVSVVIADLT
Ga0066388_1025172074	3300005332	Tropical Forest Soil	MTDREIHPPPVIVTLPSYINAANAEQATEQISTAFTPGVTIVIADLTSAAC
Ga0070682_1015774431	3300005337	Corn Rhizosphere	MHAQQTSAAPVIVTLPAQLDAAAAERAADRITAAFTPGVSVVIADLTATTCCDRSAIRNLLKAH
Ga0068868_1015473881	3300005338	Miscanthus Rhizosphere	MPGQQTCAAPVIVTLPARLDAAAAEQAAGQIIAAFTPGVRVVIADLTAA
Ga0068868_1017475931	3300005338	Miscanthus Rhizosphere	MPGQETGVPPVIVTLPAQINAATAEQAAGQISAAFTPGVTVVI
Ga0070667_1017410592	3300005367	Switchgrass Rhizosphere	MPGQETCAPPVIVTLPAQINAATAEQAAGQISAAFTPGVTVVIADLTATACCDRS
Ga0070714_1007771473	3300005435	Agricultural Soil	MPGQQTCAPPVVTLPAELDAAAAEQAVGQITAAFTPGVSVVIADLTAAACCDRSAIRNLLKAHRKA
Ga0070714_1016734021	3300005435	Agricultural Soil	MLDQDTCARPVIVTFPAQVTTANAEQAADQIGAAFTPGVSVVIADLTRTACRDRGAIRYLLKAHR
Ga0070714_1021739931	3300005435	Agricultural Soil	MLDQDTCARPVIVTLPDQITTANAEEAADQIGAAFTPGVSVVIADLTRTACRDRGAIRYLLKAHR
Ga0070713_1000990795	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MLGQDTCPPPVIVTLPGQITTANAEQAAGQISAAFTPGVSVVVADLTCAACRDRSAIRHLLKAHRTAAAGVGR*
Ga0070713_1002034373	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPDQPTCAPPVIVTLPAQLDAAAAEQAADQITAAFTPGVRVVIADLTAAACCDRSAIRNL
Ga0070710_103048421	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPGQQTCAPPVIVTFPAQLDAAAAEQAAGQITAAFTPGVSVVIADLTAAACCDR
Ga0070704_1010936131	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MPGQETCAPPVIVTLPAQINAATAEQAAGQISAAFTPGVTVVIADLTATACCDRSAIRHLLRAHR
Ga0068856_1007846941	3300005614	Corn Rhizosphere	MHSQQTCAAPVIVTFPAQLGATAAERAADQITAAFTPGVSVVIADLTGTAC
Ga0070717_119172601	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPDQPTCAPPVIVTLPAQLDAAAAEQAAGQITAAFTPGVSVVIADLT
Ga0079222_100838993	3300006755	Agricultural Soil	MPDQPTCAPPVIVTLPAQLDAAAAEQAAGRITAAFTPGVRVVIADLTAAACCDRSAIRNLLRA
Ga0079222_101528264	3300006755	Agricultural Soil	MHAQQTSVAPVIVTLPAQLDAAAAEQAADRITAAFTPGVSVVIADLTATTCCDRSAIRNLLKAHRK
Ga0079222_117342161	3300006755	Agricultural Soil	MHAQQTSAAPVIVTLPAQLDAAAAEQAADQITAAFTPRVSVVIADLTATTCCDRSAIRNLLKAHRK
Ga0079221_108500261	3300006804	Agricultural Soil	MPGQHTCAPPVIVTLPAQLDAAAAGQITAAFTPGVRVVIADLTAVACCDRSAIRNLLRAHRKATARG
Ga0075425_1023380391	3300006854	Populus Rhizosphere	MPGQQTCAAPVIVTLPARLDAAAAEQAADQITAAFTPGVRVVIADLTAAA
Ga0075434_1001694691	3300006871	Populus Rhizosphere	MPDQQTCAAPVIVTLPARLDAAAAEQAADRITAAFIPGVRVVIA
Ga0105247_112701371	3300009101	Switchgrass Rhizosphere	MHAQQTSAAPVIVTLPAQLDAAAAERAADRITAAFTPGVSVVIADLTATTCCDRSAIRNLLKAHRKATARGG
Ga0066709_1008108072	3300009137	Grasslands Soil	MPGQEICAPPVIVTLPAPINAATAEQAAGQISAAFTRGVTVVIADLTATACRDCP
Ga0105241_127003142	3300009174	Corn Rhizosphere	MPGQETGAPPVIVTLPAQINAAIAEQAARQISAAFTPGVTVVIADLTATACRDRSAIRHLLRAHRKATARG
Ga0105237_113537912	3300009545	Corn Rhizosphere	MHSQQTCAAPVIVTFPAQLGATAAERAADQITAAFTPGVSVVI
Ga0105249_127788771	3300009553	Switchgrass Rhizosphere	MSDQQTCTSPVIVTLPAQLDAAAAEQAADRITAAFTPGVSVVIADLTATTCCDRSAI
Ga0126374_104880921	3300009792	Tropical Forest Soil	MSGQQTCTPPVIVTLPAQLDAAAAERAADQITAALTPGVSVVIADLTAAACCDRSAIRNLLKAHRQVTARGRQ
Ga0099796_104370321	3300010159	Vadose Zone Soil	MLDQDTCVPPVIVTLPGQISTANAEQAAEQISAAFTRGVTTVIADLTSTACRDRAGVVRITACG*
Ga0126377_101598782	3300010362	Tropical Forest Soil	MSGQQTCTPPVIVTLPAQLDAAAAERAADQITAALTPGVSVVIAD
Ga0134125_125215291	3300010371	Terrestrial Soil	MPGQQTCTPPVIVTLPAHLDAAAAEQAVGQITAAFTPGVSVVIADLTAAACCDRS
Ga0134128_106382251	3300010373	Terrestrial Soil	MPGQQTCAAPVIVTLPARLDAAAAEQAAGQIIAAFTPGVRVVIADLTAAAR
Ga0134128_129695861	3300010373	Terrestrial Soil	MPGQQTCTPPVIVTLPAHLDAAAAEQAVGQITAAFTPGVSVV
Ga0126381_1030228761	3300010376	Tropical Forest Soil	MPGQQPCAPPVVTLPAQLDAAAAEQVAGQITAAFTPGVSVVIADLTAAACCDRSAIRNLLKAHRKATARGGQVR
Ga0134126_102562251	3300010396	Terrestrial Soil	MPGQQTCAPPVIVTLPAQLDAAAAEQAADQITAAFTPGVSVVIADLTAAAC
Ga0134126_116895031	3300010396	Terrestrial Soil	MPGQQTCAPPVIVTLPAQLDAAAAEQAAGQITAAFTPGVSVVIADLTA
Ga0134124_104597933	3300010397	Terrestrial Soil	MPGQETGVPPVIVTLPTQINAATAEQAAGQISAAFTPGVTVVIADLTATACRDR*
Ga0137383_104949952	3300012199	Vadose Zone Soil	MPGQETCAPPVIVTLPAHINAATAEQAAGQISAAFTPGVTTVIADLTSTACHDRSAVRHLLKA
Ga0150985_1211877902	3300012212	Avena Fatua Rhizosphere	MPGQETCAPPVIVTLPAQINAATAEQAAEQISAAFTPGVTVV
Ga0137387_110377902	3300012349	Vadose Zone Soil	MPGQETCAPRVIVTFPAQINAATAEQAAEQISAAFTPGVTIVVADLTSTACRDRSAIRHLLKAHRKATA
Ga0137372_104558531	3300012350	Vadose Zone Soil	MPSQQTCAQPVVVTLPAQITAATAEQAAGQVSAAFTPGVTVVIADLTATACRDCSAILSGSNTRSGR*
Ga0137386_103304391	3300012351	Vadose Zone Soil	MPDQETCAPPVIVTLPAQINTANVEQAAEQISAAFTPGVTIVVAD
Ga0137361_113295971	3300012362	Vadose Zone Soil	MPDQQTCAPPVIVTLPAQLDAAAADQAADQITAAFTPGVRVVIADLTAAACCDRSAIRNL
Ga0137373_102610812	3300012532	Vadose Zone Soil	MLDQETCARPVIVTLPAQISTATAEQAAEQISAAFTPGVSVVIADLTCTACRDRSAIRHL
Ga0137359_112978451	3300012923	Vadose Zone Soil	MPGQQTCAPPVIVTLPAQLDAAAAEQAADQITAAFTPGVRVVIADLTAAA
Ga0164299_104303331	3300012958	Soil	MPGQQTCAPPVIVTFPAQLDAAAAEQAAGQIIAAFTPGVRV
Ga0164308_103451902	3300012985	Soil	MPGQQTCAPPVIVTFPAQLDAAAAEQAAGQITAAFTPGVSV
Ga0157369_117184652	3300013105	Corn Rhizosphere	MPDQQTCASPVIVTLPARLDAAAAEQAADRITAAFIPGVRVVIAD
Ga0157369_119417251	3300013105	Corn Rhizosphere	MHAQQTSAAPVIVTLPAQLDAAAAEQAADRITAAFTPGVSVVIADLTATTCCDRSAIRNLLKAHRKAAVR
Ga0163162_102422681	3300013306	Switchgrass Rhizosphere	MPGQRTCAPPVIVTLPAQLDAAAAERAAGQITAAFTPGVSVVIADLTAAVCCDRSAIRN
Ga0157372_105309021	3300013307	Corn Rhizosphere	MPGQETCAPPVIVTLPAQINAATAEQAAGQISAAFTP
Ga0157372_129096111	3300013307	Corn Rhizosphere	MHAQQTSVAPVIVTLPAQLDAAAAEQAADRITAAFTPGVSVVIADLTATTCCDRS
Ga0182005_11117571	3300015265	Rhizosphere	MTDQETCAPPVIVTLPAQLNAATAEQAAGQISAAFTPGVTVVIADLTATACRDR
Ga0132255_1038007921	3300015374	Arabidopsis Rhizosphere	MPGQHTCAPPVIVTLPAQLDAAAAERAADQITAAFTPGVRVVIADLTAAACCDRSAIRNL
Ga0182035_109741801	3300016341	Soil	MADQETCPSPVIVTLPAQIDAATAEQISAAFTSGATD
Ga0187781_114276771	3300017972	Tropical Peatland	MPGQQTCAPPVIVTLPAQLDAAAAEQAAGQITAAFTPGVSVVIADL
Ga0184619_105015581	3300018061	Groundwater Sediment	MPGQETCAPPVIVTLPAQINAATAEQAAEQISAAFTPGVTVVIADLTATACRDCSAIRHL
Ga0066655_110646651	3300018431	Grasslands Soil	MVDQETHPLPVMVTLPARIDAATAEQAAEQISAAFTPGVTVVI
Ga0066662_127089891	3300018468	Grasslands Soil	MPGQQTCAPPVVTLPAELDAAAADPAAGQIPPALTPGAS
Ga0197907_106364551	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MHAQQTSAAPVIVTLPAQLDAAAAEQAADRITAAFTPGVSVVIADLTATTCCDRSAIRNLLK
Ga0179590_11165491	3300020140	Vadose Zone Soil	MPGQETCAPPVIVTLPAQIDAATAEQAAEQISAAFTPGVTVVIADLTC
Ga0210404_106299131	3300021088	Soil	MPDQPTCAPPVIVTLPAQLDAAAAEQAADQITAAFTPGVRVVIADLTAAAYCA
Ga0210408_105605381	3300021178	Soil	MPGQQTCAAPVIVTLPAQLDAAAAEQAAGQITAAFTPGVSVVIAD
Ga0210396_117688062	3300021180	Soil	MPGQETCVPPVIVTLPAQINAATAEQAAEQISAAFTPGVTVVIADLTCTACRDRSAIRHLLKVH
Ga0213881_102358442	3300021374	Exposed Rock	MLNQETSAPPVLMTFPARIDAATAEQVADQITAAFTPGVSVVIADLTSAARCDRSAIRH
Ga0213874_103634831	3300021377	Plant Roots	MIHQEICPPLAIVTFPARIDAAAADQAADQISAAFTSGARVVIADLASTGRCDRSAIRQLLKAHRKAT
Ga0210389_108096861	3300021404	Soil	MPDQQTCAPPVIVTLPAQLDAAAAEQAAGQITAAFTPGVRVVIADLTAAARCDRSAIRN
Ga0210392_102450172	3300021475	Soil	MPGQQTCTPPVIVTLPAQLDAAAAEQAAGQITAAFTPGVRVVIADLTAAARCDRSAI
Ga0210402_114747621	3300021478	Soil	MPDQPTCAPPVIVTLPAQLDAAAAEQAAGQITAAFTPGVRVV
Ga0126371_121400331	3300021560	Tropical Forest Soil	MTDQETHPPPVIVTFPSQINAVNAEQATAQISTAFTPGVTIVIADLSS
Ga0224712_101458081	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MPGQETCAPPVIVTLPAQINAATAEQAAGQISAAFTPGVT
Ga0179591_10679703	3300024347	Vadose Zone Soil	MPGQQTCAPPVIVTLPAQLDAAAAEQAADQITAAFTPGVRVVIADLTAAACCDRSAIRNLVG
Ga0207692_101508531	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MPDQPTCAPPVIVTLPAQLDAAAAEQAADQITAAFTPGVRVVIADLTAAAC
Ga0207692_102336452	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MLDQDTCARPVIVTLPDQITTANAEEAADQIGAAFTPGVSVVIADLTRTA
Ga0207692_109187321	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MPGQLTCAPPVVTLPAELDAAAAEQAAGQITAAFTPGVSVVIADLTAAACCDR
Ga0207710_105171191	3300025900	Switchgrass Rhizosphere	MPGQETCAPPVIVTLPAQINAATAEQAAGQISAAFTPGVTVVIADLTAT
Ga0207699_111262822	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MLDQDTCARPVIVTFPAQVTTANAEQAADQIGAAFTPGVSVVIADLTRTACRDRGAIRYLLKAHRKA
Ga0207699_111523631	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MHAQQTSVAPVIVTLPAQLDAAAAEQAADRLTAAFTPG
Ga0207684_1000554610	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLGQDTCPPPVIVTLPGQITTANAEQAAGQISAAFTPGVSVVVADLTCAACRDRSAIRHLLKAHRTAAAGVGR
Ga0207693_103917301	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MLDQDTCARPVIVTLPDQITTANAEEAADQIGAAFTPGVSVVIADLTRTACRDRGAIR
Ga0207693_105403251	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MLDQDTCARPVIVTFPAQVTTANAEQAADQIGAAFTPGVSVVIADLTRTACRDRGAIR
Ga0207663_100613001	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MLDQDTCARPVIVTFPAQVTTANAEQAADQIGAAFTPGVSVVIADLTRTACRDRGAIRYLLKAHRKAAVRGRQVRFA
Ga0207652_114250341	3300025921	Corn Rhizosphere	MHAQQTSVASVIVTLPAQLDAAAAEQAADRITAAFTPGVSVVIADLTATTCCDRS
Ga0207694_114435361	3300025924	Corn Rhizosphere	MPDQQTCASPVIVTLPAQLDAAAAEQAADRITAAFTPGVSVVIADLTRTACRDRGAIRYLLKAHRKAAVRGRQVRFAI
Ga0207664_100642011	3300025929	Agricultural Soil	MPDQQTCASPVIVTLPARLDAAAAEQAADRITAAFIPGVRVVIADLTAAACCDRSAIRNLLRAHRKA
Ga0207664_115973472	3300025929	Agricultural Soil	MPGQQTCAPPVVTLPAELDAAAAEQAVGQITAAFTPGVSVVIADLTAAACCDRSAIRNLLKAHRKATVRG
Ga0207667_111201081	3300025949	Corn Rhizosphere	MSDQQTCASPVIVTLPAQLDAAAAEQAAGQITAAFIPGVRVVIADLTAAARCDRSAIRNLLRAHRKATVRGRQVRFAIRPG
Ga0207712_114037391	3300025961	Switchgrass Rhizosphere	MSDQQTCASPVIVTLPAQLDAAAAEQAADRITAAFTPGVSVVIADLTATT
Ga0207640_108023431	3300025981	Corn Rhizosphere	MPDQQTCASPVIVTLPARLDAAAAEQAADRITAAFIPGVSVVIADLTAAACCDRSAIRNLLKAHRKATVRG
Ga0207641_108326972	3300026088	Switchgrass Rhizosphere	MLDQDTCARPVIVTLPDQITTANAEEAADQIGAAFTPGV
Ga0257146_10483951	3300026374	Soil	MPGQQTCAPPVIVTLPAQLDAAAAEQAADQITAAFTPGVSVVIADLTAAACCDRSAIRNLLKAHRKATARGRQV
Ga0257153_11021001	3300026490	Soil	MPGQETCTPPVIVTLPAQLDAGGAEQAADQITAAFTPGVRVVIADLTAAACCDRSAIRNLLKAH
Ga0257156_10853921	3300026498	Soil	MPDQQTCAPPVIVTLPAQLDAAAAEQAADQITAAFTPGVRVVIADLTAAACCDRSAIRNLLKA
Ga0209178_13940642	3300027725	Agricultural Soil	MPGQQTCAPPVIVTLPARLDAAAAGQAAGRITAAFTPGVRV
Ga0209074_100406794	3300027787	Agricultural Soil	MHAQQTSVAPVIVTLPAQLDAAAAEQAADRITAAFTPGVSVVIADLTATTCCDRSAIRKLLKAHRKTIA
Ga0307309_100132681	3300028714	Soil	MPGQETCAPPVIVTLPAQINAATAEQAAEQISAAFTPGVTVVIADLTAT
Ga0307317_101313361	3300028720	Soil	MPGQEACAPPVIVTLPAQINAATAEQAAEQISAAFTPGVTVVIADLTATACRDCSAI
Ga0307280_100963752	3300028768	Soil	MPDQQTCAPPVIVTLPAQLDAAAAEQAADQITAAFTPGVRVVIADLTAAACCDRSAIRNLLKAHRKDTV
Ga0307310_104472612	3300028824	Soil	MPGQETCAPPVIVTLPAQINAATAEQAAGQISAAFTPGVTVVIADLTATACRDCSAI
Ga0307304_105629001	3300028885	Soil	MSDQETCAPPVIVTLPAQINTANAERAAEQISAAFT
Ga0318534_105172802	3300031544	Soil	MADQETCPSPVIVTLPAQIDAATAEQISAAFTSGATVVIADLTATAYGDCSPI
Ga0318534_108586981	3300031544	Soil	MTGHRPCTPPVIVTFPAQVSAANAEQAAGQITASFTPGVTVVIADLTSTTCRDGSAVRYLLKAHRKAAVRAR
Ga0318515_102673121	3300031572	Soil	MTDREIHPPPVIVTLPSYINAANAEQATEQISTAFTPGATIVIADLTSAACRDRSA
Ga0318574_106040181	3300031680	Soil	MVDQEIHPLPVMVTLPAQIDAAIAEQAAEQIGAAFTPGVTVVIADLSS
Ga0318560_106225521	3300031682	Soil	MTDREIHPPPVIVTLPSYINAANAEQATEQISTAFTPGATIVIADLTSAACRDRSALRH
Ga0310686_1124683631	3300031708	Soil	MPGQETCVPPVIVTLPAQINAATAEQAAEQISAAFTPGVTV
Ga0318496_103679421	3300031713	Soil	MTGHRPCTPPVIVTFPAQVSAANAEQAAGQITASFTPGVTVVIADLTSTTCRDGSAVRYLLKAHRK
Ga0318543_104847411	3300031777	Soil	MTDREIHPPPVIVTLPSYINAANAEQATEQISTAFTPGATIVIADLTSAACRD
Ga0318498_104078882	3300031778	Soil	MPDQEVCTTPVIVTLPARIDAAAAEHAADYITAAFTPGVM
Ga0318499_104123591	3300031832	Soil	MADQETCPSPVIVTLPAQIDAATAEQISAAFTSGATVVIADLTA
Ga0318495_100939752	3300031860	Soil	MADQETCPSPVIVTLPAQIDAATAEQISAAFTSGATVVIADLTATAYGDCSPIRHLLKAHRQATARGGQV
Ga0318551_105366591	3300031896	Soil	MADQETCPSPVIVTLPAQIDATTAEQISAAFTSGATVVIADLTATAYGDCSPIRHLLKAHRQATARGGQV
Ga0306923_123510232	3300031910	Soil	MPGQQTCAPPVIVTLPAQLDAAAAERAADQITAAFTPGVSVVIADLTAAAGCDR
Ga0307479_117629841	3300031962	Hardwood Forest Soil	MPGQQTCAAPVIVTLPAQLDAAAAEQAADQITAAFTPGVSVVIADLTAA
Ga0318505_102095583	3300032060	Soil	MTDREIHPPPVIVTLPSYINAANAEQATEQISTAFTPGATIVIADLTSAACRDR
Ga0306924_120399722	3300032076	Soil	MPAQQTCVPAVVVTLPGQLDAAAAEQAAGQITAAFTPGVSVVI
Ga0307470_104090371	3300032174	Hardwood Forest Soil	MPGQQTCAPPVIVTLPAQLDAAAAEQAAGQITAAFTPGVRVVIADLTAA
Ga0306920_1042323211	3300032261	Soil	MAGQETCPSPVIVTLPAQIDAATAEQISAAFTSGATVVIADLTA
Ga0335082_108475961	3300032782	Soil	TGLPGQETCAPPVIVTLPAQIIAAADPAAGQVSGLRG
Ga0335080_113518522	3300032828	Soil	MPGQQPCAPPVVTLPAELDGAAAEQAAGQITAAFSPGVSVVIADLTAAVCC
Ga0335074_112190961	3300032895	Soil	MASHETRPQPVIVTFPAQVNAADAEQAAGRVTASFTPGVTVAIADLTSTTCHDDSAIRHLLEAHRKAAARGG
Ga0335076_104893133	3300032955	Soil	MADHEPCGPPVIVTCPAQINAANAEQAAGQISASFTPGVTVVIADLTSTTCRDGSAIRHLLKAHRKVAV
Ga0310914_115023651	3300033289	Soil	MADQETCPSPVIVTLPAQIDAATAEQISAAFTSGATVVIADLTATAYGDCSPIRHLL
Ga0318519_105432361	3300033290	Soil	MADQETCPSPVIVTLPAQIDAATAEQISAAFTSGATVVIADLTATAYGDCSPIRHLLKAHRQA
Ga0318519_105647961	3300033290	Soil	MTGHRPCTPPVIVTFPAQVSAANAEQAAGQITASFTPGVTVVIADLTSTTCRDGSAVRYLLK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062664

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences