NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F062667

Metagenome / Metatranscriptome Family F062667

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F062667
Family Type Metagenome / Metatranscriptome
Number of Sequences 130
Average Sequence Length 85 residues
Representative Sequence VAWTIIEIETAAPGWRTRGAGGEDGAPVALWALVENEVGERLVVGLDPTAEGTSGPGGRLIDVNRLIAEIDDGEGGYTYRAPLS
Number of Associated Samples 102
Number of Associated Scaffolds 130

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 28.46 %
% of genes near scaffold ends (potentially truncated) 41.54 %
% of genes from short scaffolds (< 2000 bps) 93.08 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (51.538 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(21.538 % of family members)
Environment Ontology (ENVO) Unclassified
(35.385 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(57.692 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 8.04%    β-sheet: 23.21%    Coil/Unstructured: 68.75%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 130 Family Scaffolds
PF04978DUF664 34.62
PF12867DinB_2 23.08
PF02541Ppx-GppA 3.08
PF14417MEDS 3.08
PF04075F420H2_quin_red 3.08
PF11239DUF3040 3.08
PF13398Peptidase_M50B 1.54
PF13404HTH_AsnC-type 0.77
PF02353CMAS 0.77
PF00296Bac_luciferase 0.77

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 130 Family Scaffolds
COG0248Exopolyphosphatase/pppGpp-phosphohydrolaseSignal transduction mechanisms [T] 6.15
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.77
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 0.77
COG22272-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylaseCoenzyme transport and metabolism [H] 0.77
COG2230Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferasesLipid transport and metabolism [I] 0.77

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms51.54 %
UnclassifiedrootN/A48.46 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002568|C688J35102_119483520Not Available704Open in IMG/M
3300002568|C688J35102_120173954All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia911Open in IMG/M
3300004016|Ga0058689_10030991All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria920Open in IMG/M
3300004156|Ga0062589_101169195Not Available733Open in IMG/M
3300004463|Ga0063356_101911200All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales895Open in IMG/M
3300005093|Ga0062594_101578922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. XY006678Open in IMG/M
3300005328|Ga0070676_10663422Not Available758Open in IMG/M
3300005331|Ga0070670_101313583All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. XY006662Open in IMG/M
3300005334|Ga0068869_100256226All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1399Open in IMG/M
3300005337|Ga0070682_100027430All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae3417Open in IMG/M
3300005337|Ga0070682_101036847Not Available683Open in IMG/M
3300005338|Ga0068868_100182826Not Available1740Open in IMG/M
3300005354|Ga0070675_100468169All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae1132Open in IMG/M
3300005354|Ga0070675_101406274All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. XY006643Open in IMG/M
3300005356|Ga0070674_101316176All Organisms → cellular organisms → Bacteria → Terrabacteria group645Open in IMG/M
3300005441|Ga0070700_101192292Not Available635Open in IMG/M
3300005441|Ga0070700_101679066Not Available544Open in IMG/M
3300005530|Ga0070679_101924399All Organisms → cellular organisms → Bacteria → Terrabacteria group540Open in IMG/M
3300005548|Ga0070665_101475019Not Available689Open in IMG/M
3300005578|Ga0068854_100183460All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1636Open in IMG/M
3300005719|Ga0068861_102155007All Organisms → cellular organisms → Bacteria → Terrabacteria group558Open in IMG/M
3300005834|Ga0068851_10234088All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1036Open in IMG/M
3300006755|Ga0079222_10032369All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2248Open in IMG/M
3300006755|Ga0079222_12057372All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales563Open in IMG/M
3300007790|Ga0105679_10029004Not Available1259Open in IMG/M
3300009094|Ga0111539_13172807Not Available530Open in IMG/M
3300009098|Ga0105245_12304852Not Available592Open in IMG/M
3300009100|Ga0075418_12327263All Organisms → cellular organisms → Bacteria → Terrabacteria group584Open in IMG/M
3300009156|Ga0111538_10167620All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2789Open in IMG/M
3300009156|Ga0111538_12380559Not Available665Open in IMG/M
3300009553|Ga0105249_10597311Not Available1158Open in IMG/M
3300009789|Ga0126307_10030326All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae4155Open in IMG/M
3300010039|Ga0126309_10928545Not Available579Open in IMG/M
3300010166|Ga0126306_10546944Not Available919Open in IMG/M
3300010371|Ga0134125_10798749Not Available1038Open in IMG/M
3300010395|Ga0058701_10843914All Organisms → cellular organisms → Bacteria → Terrabacteria group500Open in IMG/M
3300010399|Ga0134127_12890808Not Available559Open in IMG/M
3300010403|Ga0134123_10443502All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides mesophilus1204Open in IMG/M
3300011107|Ga0151490_1815168Not Available890Open in IMG/M
3300011332|Ga0126317_10044185Not Available519Open in IMG/M
3300011333|Ga0127502_10825437Not Available609Open in IMG/M
3300011333|Ga0127502_11334813Not Available584Open in IMG/M
3300012212|Ga0150985_117302439Not Available516Open in IMG/M
3300012469|Ga0150984_108363515All Organisms → cellular organisms → Bacteria → Terrabacteria group594Open in IMG/M
3300012469|Ga0150984_108484709All Organisms → cellular organisms → Bacteria → Terrabacteria group573Open in IMG/M
3300012469|Ga0150984_110487104All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1654Open in IMG/M
3300012469|Ga0150984_111436299Not Available737Open in IMG/M
3300012469|Ga0150984_114076641All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora saliphila573Open in IMG/M
3300012482|Ga0157318_1029364All Organisms → cellular organisms → Bacteria → Terrabacteria group535Open in IMG/M
3300012487|Ga0157321_1006433Not Available800Open in IMG/M
3300012498|Ga0157345_1008987All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae845Open in IMG/M
3300012897|Ga0157285_10037553All Organisms → cellular organisms → Bacteria1124Open in IMG/M
3300012985|Ga0164308_12289146All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora saliphila502Open in IMG/M
3300012987|Ga0164307_11654091Not Available542Open in IMG/M
3300013296|Ga0157374_10356493All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1454Open in IMG/M
3300013306|Ga0163162_11369995All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. XY006804Open in IMG/M
3300014487|Ga0182000_10598021All Organisms → cellular organisms → Bacteria → Terrabacteria group532Open in IMG/M
3300014488|Ga0182001_10069276Not Available1009Open in IMG/M
3300014488|Ga0182001_10310006Not Available643Open in IMG/M
3300014745|Ga0157377_10409007Not Available926Open in IMG/M
3300017965|Ga0190266_11188724Not Available527Open in IMG/M
3300018083|Ga0184628_10214085Not Available1009Open in IMG/M
3300018422|Ga0190265_11842817Not Available712Open in IMG/M
3300018422|Ga0190265_12230703All Organisms → cellular organisms → Bacteria → Terrabacteria group650Open in IMG/M
3300018422|Ga0190265_12927218Not Available570Open in IMG/M
3300018465|Ga0190269_11054345All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria621Open in IMG/M
3300018465|Ga0190269_11784502All Organisms → cellular organisms → Bacteria → Terrabacteria group524Open in IMG/M
3300018466|Ga0190268_10013038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2431Open in IMG/M
3300018466|Ga0190268_10087065Not Available1401Open in IMG/M
3300018466|Ga0190268_10183089All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides mesophilus1119Open in IMG/M
3300018469|Ga0190270_10224055Not Available1612Open in IMG/M
3300018476|Ga0190274_10153164All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1950Open in IMG/M
3300018481|Ga0190271_12039888Not Available682Open in IMG/M
3300018920|Ga0190273_10061259Not Available1950Open in IMG/M
3300018920|Ga0190273_10071611All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1838Open in IMG/M
3300018920|Ga0190273_10085022Not Available1722Open in IMG/M
3300018920|Ga0190273_10575835Not Available844Open in IMG/M
3300019263|Ga0184647_1389342All Organisms → cellular organisms → Bacteria → Terrabacteria group585Open in IMG/M
3300019377|Ga0190264_11936383Not Available537Open in IMG/M
3300019767|Ga0190267_10494829All Organisms → cellular organisms → Bacteria → Terrabacteria group720Open in IMG/M
3300019767|Ga0190267_10818460All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora saliphila622Open in IMG/M
3300019767|Ga0190267_11589006All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia510Open in IMG/M
3300020080|Ga0206350_11404132Not Available1074Open in IMG/M
3300020081|Ga0206354_10573325Not Available712Open in IMG/M
3300020154|Ga0196965_1045539Not Available1147Open in IMG/M
3300025899|Ga0207642_11132722Not Available506Open in IMG/M
3300025908|Ga0207643_10339542Not Available941Open in IMG/M
3300025909|Ga0207705_11338006All Organisms → cellular organisms → Bacteria → Terrabacteria group546Open in IMG/M
3300025926|Ga0207659_10249066All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides halotolerans1441Open in IMG/M
3300025927|Ga0207687_11108563All Organisms → cellular organisms → Bacteria → Terrabacteria group680Open in IMG/M
3300025932|Ga0207690_10111524All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1971Open in IMG/M
3300025933|Ga0207706_10454010All Organisms → cellular organisms → Bacteria1108Open in IMG/M
3300025942|Ga0207689_10500044Not Available1019Open in IMG/M
3300025944|Ga0207661_11511365All Organisms → cellular organisms → Bacteria → Terrabacteria group615Open in IMG/M
3300025972|Ga0207668_11196519All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora saliphila683Open in IMG/M
3300025981|Ga0207640_10425147All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1088Open in IMG/M
3300026023|Ga0207677_10711194Not Available892Open in IMG/M
3300026023|Ga0207677_12160937All Organisms → cellular organisms → Bacteria → Terrabacteria group518Open in IMG/M
3300026067|Ga0207678_10067917All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3059Open in IMG/M
3300026088|Ga0207641_10702683All Organisms → cellular organisms → Bacteria996Open in IMG/M
3300026142|Ga0207698_10219897Not Available1715Open in IMG/M
3300027750|Ga0209461_10009242All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1656Open in IMG/M
3300028379|Ga0268266_11280855Not Available708Open in IMG/M
3300028379|Ga0268266_12312737Not Available509Open in IMG/M
3300028596|Ga0247821_10969071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. XY006568Open in IMG/M
3300028721|Ga0307315_10200118Not Available618Open in IMG/M
3300028755|Ga0307316_10220575All Organisms → cellular organisms → Bacteria → Terrabacteria group685Open in IMG/M
3300030336|Ga0247826_11025120All Organisms → cellular organisms → Bacteria → Terrabacteria group656Open in IMG/M
3300030336|Ga0247826_11055366All Organisms → cellular organisms → Bacteria → Terrabacteria group647Open in IMG/M
3300030514|Ga0268253_10269136Not Available580Open in IMG/M
3300031616|Ga0307508_10491967Not Available821Open in IMG/M
3300031852|Ga0307410_11035613Not Available709Open in IMG/M
3300031854|Ga0310904_10936909All Organisms → cellular organisms → Bacteria → Terrabacteria group614Open in IMG/M
3300031901|Ga0307406_10518265Not Available970Open in IMG/M
3300031908|Ga0310900_10076599Not Available2068Open in IMG/M
3300032002|Ga0307416_101332409All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora saliphila824Open in IMG/M
3300032080|Ga0326721_10020525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2548Open in IMG/M
3300032080|Ga0326721_10039346All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1980Open in IMG/M
3300032080|Ga0326721_11145692All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora saliphila503Open in IMG/M
3300032126|Ga0307415_102282144Not Available531Open in IMG/M
3300033551|Ga0247830_10084394All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2195Open in IMG/M
3300033989|Ga0334924_027791Not Available715Open in IMG/M
3300034004|Ga0334926_046067All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria701Open in IMG/M
3300034006|Ga0334934_055073Not Available577Open in IMG/M
3300034029|Ga0334951_066324Not Available928Open in IMG/M
3300034133|Ga0334916_002786All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1771Open in IMG/M
3300034139|Ga0334956_102612Not Available511Open in IMG/M
3300034173|Ga0334925_110854Not Available592Open in IMG/M
3300034221|Ga0334937_090312Not Available846Open in IMG/M
3300034221|Ga0334937_093948Not Available828Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil21.54%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere5.38%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.62%
BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust3.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.85%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere3.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.08%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.08%
Hypolithic BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust3.08%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.08%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.08%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere3.08%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.08%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil2.31%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.31%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.31%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere2.31%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.54%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.54%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.54%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.54%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil1.54%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.54%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.54%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.54%
AgaveHost-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave1.54%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave1.54%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.77%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.77%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.77%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.77%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.77%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004016Agave microbial communities from Guanajuato, Mexico - As.Ma.rzHost-AssociatedOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300007790Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projectsEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010395Agave microbial communities from Guanajuato, Mexico - Or.Ma.eHost-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011107Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300011332Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011333Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012482Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.130510Host-AssociatedOpen in IMG/M
3300012487Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.old.130510Host-AssociatedOpen in IMG/M
3300012498Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410Host-AssociatedOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300014488Bulk soil microbial communities from Mexico - San Felipe (SF) metaGEnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019263Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300020080Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020154Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_20EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027750Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300030514Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)Host-AssociatedOpen in IMG/M
3300031616Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EMHost-AssociatedOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032080Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300033989Biocrust microbial communities from Mojave Desert, California, United States - 20HNCEnvironmentalOpen in IMG/M
3300034004Biocrust microbial communities from Mojave Desert, California, United States - 22HNCEnvironmentalOpen in IMG/M
3300034006Biocrust microbial communities from Mojave Desert, California, United States - 30SMCEnvironmentalOpen in IMG/M
3300034029Biocrust microbial communities from Mojave Desert, California, United States - 47SNCEnvironmentalOpen in IMG/M
3300034133Biocrust microbial communities from Mojave Desert, California, United States - 12HMCEnvironmentalOpen in IMG/M
3300034139Biocrust microbial communities from Mojave Desert, California, United States - 52SNCEnvironmentalOpen in IMG/M
3300034173Biocrust microbial communities from Mojave Desert, California, United States - 21HNCEnvironmentalOpen in IMG/M
3300034221Biocrust microbial communities from Mojave Desert, California, United States - 33SMCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J35102_11948352023300002568SoilVAWTIVEIETAAPGWRTSGTGGEDGAPVAVWALVENEVGERFVLGLDPTAEGATGPGGRLMDVNRLIAEIDDGEGGYIYRAPLS*
C688J35102_12017395423300002568SoilVAWTIIEIETAAPGWRTSGAAGDDGAPVAVWALVEDEAGRRFVVGVDPTAEGTAGPGGRLIDVDRLIEGIDAAEGGYIYRAPLS*
Ga0058689_1003099123300004016AgaveVAWKIIEIETAAPGWRTRGSGPDEDGAPVAVWALVENDSGERLVVGLDPTADGADGPGGRLLDVNRVIAEVGQAVGGYTYRAPLS*
Ga0062589_10116919523300004156SoilTWHGSAVAWTIVEIETAAPGWRTSGGAGEDGAPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAEIDTDAGGYLYRAPLS*
Ga0063356_10191120023300004463Arabidopsis Thaliana RhizosphereVAWTIIEIETAAPGWRTSGGGHEDGAPVAVWALVEDDAGARFVVGLDPTAEGTAGPGGRLIDVNKLIAQVDRSEGGYIYRAPLS*
Ga0062594_10157892223300005093SoilARSPWHGGVVAWTIVEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAEGVGGRGARLIDVNRLIADIDDGPGAGYTYRAPLS*
Ga0070676_1066342213300005328Miscanthus RhizosphereVAWTIVEIETAAPGWRTSGGAGEDGAPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAEIDTDAGGYLYRAPLA*
Ga0070670_10131358313300005331Switchgrass RhizosphereVAWTIIEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAQGVGGPGARLIDVNRLIADLDDGPGAGYTYRAPLS*
Ga0068869_10025622623300005334Miscanthus RhizosphereVAWTIIEIETAAPGWRTQGAGGEDGAPVALWALVENEVGQRLVVGVDPTAEGVGGLGGRLIDVNRLIAGIDDGPGVGYIYRAPLS*
Ga0070682_10002743033300005337Corn RhizosphereVAWTIVEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAEGVGGRGARLIDVNRLIADIDDGPGAGYTYRAPLS*
Ga0070682_10103684723300005337Corn RhizosphereAVAWTIVEIETAAPGWRTSGTGGDDDAPVAVWALVENEVGERFVLGLDPTAEGATGPGGRLMDVNRLIAEIDDREGGYTYRAPLS*
Ga0068868_10018282633300005338Miscanthus RhizosphereVAWTIVEIETAAPGWRTSGGAGEDGAPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAEIDTDAGGYLYRAPLS*
Ga0070675_10046816933300005354Miscanthus RhizosphereVAWTIVEIETAAPGWRTSGGAGEDGAPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLSAEIDTDAGGYLYRAPLS*
Ga0070675_10140627423300005354Miscanthus RhizosphereTIIEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAQGVGGPGARLIDVNRLIADLDDGPGAGYTYRAPLS*
Ga0070674_10131617623300005356Miscanthus RhizosphereTDHRRPPLAAARSPWHGGVVAWTIVEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAEGVGGRGARLIDVNRLIADIDDGPGAGYTYRAPLS*
Ga0070700_10119229223300005441Corn, Switchgrass And Miscanthus RhizosphereVAWTIIGIETAAPGWRTSGGGHEDGAPVAVWALVEDDAGARFVVGLDPTAEGTAGPGGRLIDVNKLIAQVDRSEGGYIYRAPLS*
Ga0070700_10167906623300005441Corn, Switchgrass And Miscanthus RhizosphereVAWTIIEIETAAPGWRTSGAAGDDGAPVAVWALVEDEAGRRFVVGVDPTAEGTAGPGGRLIDVDRLIEGIDAAEGGYTYRAPL
Ga0070679_10192439923300005530Corn RhizosphereWTIVEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAEGVGGRGARLIDVNRLIADLDDGPGAGYTYRAPLS*
Ga0070665_10147501913300005548Switchgrass RhizosphereAAPGWRTSGTGGDDGAPVAVWALVENEVGERFVLGLDPTAEGATGPGGRLMDVNRLIAEIDDREGGYTYRAPLS*
Ga0068854_10018346013300005578Corn RhizosphereGSAVAWTIVEIETAAPGWRTSGGAGEDGAPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAEIDTDAGGYLYRAPLS*
Ga0068861_10215500713300005719Switchgrass RhizosphereETAAPGWRTSGGAGEDGAPVALWALVENDVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAEIDTDAGGYLYRAPLS*
Ga0068851_1023408813300005834Corn RhizosphereVAWTIVEIETAAPGWRTSGGAGEDGAPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAEIDTDAGGYL
Ga0079222_1003236933300006755Agricultural SoilVAWTIVEIETAAPGWRTRGAGDEDGAPVALWALVENEVGERLVVGVDPTAEGIGGLGGRLIDVNRLIAGIDDGPGVGYIYRAPLS*
Ga0079222_1205737223300006755Agricultural SoilVAWTIIEIETAAPGWRTSGPAQEDGAPVALWALVENESGERFVVGLDPTAEGTAGPGGRLIDVNKLITQVDATEGGYTYRAPLS*
Ga0105679_1002900423300007790SoilVAWTIVEIETAAPGWRTSGAAGDDGAPVAVWALVENEVGDRFVLGLDPTAEGTAGPGGRLIDVNRLIAEIDDGQGGYTYRAPLS*
Ga0111539_1317280713300009094Populus RhizosphereVAWTIIEIETAAPGWRTRGAGDEDGAPVALWALVENEVGERVVVGVDPTAEGTGGPGGRLIDANRLIAEIDDGEGGYTYRAPLS*
Ga0105245_1230485223300009098Miscanthus RhizosphereVAWTIIEIETAAPGWRTRGAGGEDGAPVALWALVENEVGERVVVGVDPTAEGTSGPGGRLIDANRLIAEIDDREGGYTYRAPLS*
Ga0075418_1232726313300009100Populus RhizosphereRPDPRGTVTLVAWRIVEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERVVIGLDPTAEGTSGPGGRLIDVNRLIAEIDTGEGGYTYRAPLS*
Ga0111538_1016762053300009156Populus RhizosphereVAWTIIEIETAAPGWRTRGAGGEDGAPVALWALVENEVGERVVVGVDPTAEGTSGPGGRLIDANRLIAEIDDSDGGYTYRAPLS*
Ga0111538_1238055923300009156Populus RhizosphereVAWTIVEIETAAPGWRTRGAGDEDGAPVALWALVENEVGERLVVGVDPTAEGVGGLGGRLIDVNRLIAGIDDGPGVGYIYRAPLS*
Ga0105249_1059731123300009553Switchgrass RhizosphereVAWTIVEIETAAPGWRTSGGAGEDGAPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAEIDIDAGGYLYRAPLS*
Ga0126307_1003032633300009789Serpentine SoilVAWTIVEIETAAPGWRTSGTGGEDGAPVAVWALVENEVGERFVLGLDPTAEGATGPGGRLMDVNRLIAEIDDGEGGYTYRAPLS*
Ga0126309_1092854523300010039Serpentine SoilVAWTVIEIETAAPGWRTSGAAGEDGSPVAVWALVENEEGERFVVGLDPTAEGAAGPGGRLIDVNRLIAQIDATEGGYIYRAPLS*
Ga0126306_1054694413300010166Serpentine SoilVAWTIVEIETAAPGWRTSGTGGEDGAPVAVWALVENEVGERFVLGLDPTAEGATGPGGRLMDVNRLIAELDDGEGGHTYRAPLS*
Ga0134125_1079874913300010371Terrestrial SoilPGSHVPTDHRRPPLARARSPWHGGVVAWTIVEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAEGVGGRGARLIDVNRLIADIDDGPGAGYTYRAPLS*
Ga0058701_1084391423300010395AgaveRTSGAAGEDGSPVAVWALVENEAGERFVVGLDPTAEGAAGRGGRLIDVNRLIAQIDATEGGYIYRAPLS*
Ga0134127_1289080813300010399Terrestrial SoilVAWTIIEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAEGVGGRGARLIDVNRLIADLDDGPGAGYTYRAPLS*
Ga0134123_1044350213300010403Terrestrial SoilARSPWHGGVVAWTIVEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAQGVGGPGARLIDVNRLIADLDDGPGAGYTYRAPLS*
Ga0151490_181516823300011107SoilVAWTIVEIETAAPGWRTSGGAGEDGAPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAEIDTDSGGYLYRAPLS*
Ga0126317_1004418523300011332SoilVAWTIVEIETAAPGWRTSGGAGEDGAPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAEIDTD
Ga0127502_1082543723300011333SoilVAWTIIEIETAAPGWRTRGAGGEDGAPVALWALVENEVGERLVVGLDPTAEGTSGPGGRLIDVNRLIAEIDDGEGGYTYRAPLS*
Ga0127502_1133481313300011333SoilVAWTIVEIETAAPGWRTSGTGGEDGAPVAVWALVENEVGERFVLGLDPTAEGATGPGGRLMDVNRLIAEIDDGEG
Ga0150985_11730243923300012212Avena Fatua RhizospherePLAAVRSTWHGGAVAWTIVEIETAAPGWRTSGTGGDDGAPVAVWALVENEVGERFVLGLDPTAEGATGPGGRLMDVNRLIAEIDDREGGYTYRAPLS*
Ga0150984_10836351513300012469Avena Fatua RhizosphereRAWHRTAVAWTIIEIETAAPGWRTSGAAGDDGAPVAVWALVEDEAGRRFVVGVDPTAEGMAGPGGRLIDVDRLIEGIDATEGGYTYRAPLS*
Ga0150984_10848470923300012469Avena Fatua RhizosphereWTIIEIETAAPGWRTSGGAQEDGAPVAVWALVENEAGERFVVGLDPTAEGTAGPGGRLLDVNRLIAQIDKTEGGYIYRAPLS*
Ga0150984_11048710413300012469Avena Fatua RhizosphereVAWTIIEIETAAPGWRTSGAGGDDGAPVAVWALVENEVGERYVVGVDPTAEGTGGPGGRLIDVNRLIAGIDEAEGGYTYRAPLS*
Ga0150984_11143629913300012469Avena Fatua RhizosphereVAWTIIEIETAAPGWRTSGGPHEDGAPVAVWALVENESGERYIVGIDPTGEGDNGPNGRLIDVNRLIDEVRASKSGYTYRAPLS*
Ga0150984_11407664113300012469Avena Fatua RhizosphereVAWTIVEIETAAPGWRTSGTGGDDGAPVAVWALVENEVGERFVLGLDPTAEGATGPGGRLMDVNRLIAEIDDREGGYTYRAPLS*
Ga0157318_102936423300012482Arabidopsis RhizosphereVAGTIVEIETAAPGWRTSGGAGDDGAPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAELDTDAGGYLYRAPLS*
Ga0157321_100643323300012487Arabidopsis RhizosphereVAWTIVEIETAAPGWRTSGAAGDDGAPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAELDTDAGGYLYRAPLS*
Ga0157345_100898723300012498Arabidopsis RhizosphereVAWTIVEIETAAPGWRTSGGAGDDGAPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAEIDTDAGGYLYRAPLS*
Ga0157285_1003755323300012897SoilVAWTIVEIETAAPGWRTSGGAGEDGAPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAEIHTDAGGYLYRAPLS*
Ga0164308_1228914623300012985SoilVAWTIVEIETATPGWRTSGGAGEDGAPVALWALVENEVGDRYVLGLDPTAEGMTGPGGRLIDVNRLIAEIDTGAGGYLYRAPLS*
Ga0164307_1165409123300012987SoilVAWTIVEIETATPGWRTSGGAGEDGAPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAEIDTDAGGYLYRAPLS*
Ga0157374_1035649333300013296Miscanthus RhizosphereWTIIEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAQGVGGPGARLIDVNRLIADLDDGPGAGYTYRAPLS*
Ga0163162_1136999523300013306Switchgrass RhizospherePTDHRRPPLASARSPWHGGVVAWTIIEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAQGVGGPGARLIDVNRLIADLDDGPGAGYTYRAPLS*
Ga0182000_1059802113300014487SoilTWHGTAVAWKIIEIETAAPGWRTRGSGPDEDGAPVAVWALVENDSGERLVVGLDPTADGADGPGGRLLDVNRVIAEVGQAVGGYTYRAPLS*
Ga0182001_1006927613300014488SoilVWHGTPVAWTIIEIESASPGWRTSGARGEDGFPVALWALVENESGERFVVGLDPTAEGQSGPGGRLIDVNRLIAEIDRAEGGYIYRAPLS*
Ga0182001_1031000613300014488SoilVAWTIVEIETAAQGWRTSGAGGDDGAPVAVWALVENEVGDRFVLGLDPTAEGTAGPGGRLIDVNRLIAEIDDRQGGYTYRAPLS*
Ga0157377_1040900713300014745Miscanthus RhizosphereHGSPVAWTIVEIETAAPGWRTSGGAGEDGAPVALWALVENELGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAELDTDAGGYLYRAPLS*
Ga0190266_1118872423300017965SoilVAWTIVEIETAAPGWRTSGGAGEDGVPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAEIDTDAGGYLYRAPLS
Ga0184628_1021408523300018083Groundwater SedimentVAWTIVEIETAAPGWRTSGGAGEDGAPVALWALVENEVGDRFVLGLDPTAEGMTGPGGRLIDVNRLIAEIDTDTDAGGYVYRAPLS
Ga0190265_1184281713300018422SoilGWRTSGTGGDDGAPVAVWALVENEVGERFVLGLDPTAEGATGPGGRLMDVNRLIAEIDDREGGYTYRAPLS
Ga0190265_1223070323300018422SoilAAVRSTWHGGAVAWTIVEIETAAPGWRTSGTGGEDGAPVAVWALVENEVGDRFVLGLDPTAEGATGPGGRLMDVNRLIAEIDDGEGGYTYRAPLS
Ga0190265_1292721813300018422SoilVAWTIVEIETAAPGWRTSGTGGDDGAPVAVWALVENEVGERFVLGLDPTAEGATGPGGRLMDVNRLIAEIDDGEGGYTYRAPLS
Ga0190269_1105434513300018465SoilLALAVGVRTWHGTAVTWKIIEIETAAPGWRTRGGSPDQDGAPVAVWALVENDSGERLVVGLDPTADGAEGPGGRLIDANRVIEEVGGTVGGYTYRAPLS
Ga0190269_1178450223300018465SoilAPGWRTRGAGDEDGAPVALWALVENEVGERVVVGLDPTAEGTGGPGGRLIDANRLIAELDDGEGGYTYRAPLS
Ga0190268_1001303823300018466SoilVAWTIIEIETAAPGWRTQSGADGDGAPVAVWALVENEAGERFVVGLDPTAEEADGPGGRLIDVNRIVEEARSVAGGYVYRAPLS
Ga0190268_1008706533300018466SoilVAWTIVEIETAAPGWRTSGTGGDDGAPVAVWALVENEVGERFVLGLDPTAEGATGPGGRLMDVNRLIAEIDDGEGGYIYRAPLS
Ga0190268_1018308923300018466SoilVAWTVIEIETAAPGWRTSGVAGEDGSPVAVWALVENEAGERFVVGLDPTAEGAGGPGGRLIDVNRLIAQIDATEGGYIYRAPLS
Ga0190270_1022405533300018469SoilVAWTIVEIETAAPGWRTSGTGGDDGAPFSVWALVENEVGERFVLGLDPTAEGATGPGGRLMDVNRLIAEIDDGEGGYTYRAPLS
Ga0190274_1015316423300018476SoilVAWTIVEIETAAPGWRTSGTGGEDGAPVAVWALVENEVGERFVLGLDPTAEGATGPGGRLMDVNRLIAEIDDGEGGYTYRAPLS
Ga0190271_1203988823300018481SoilVAWTIIEIETAAPGWRTQGGADGEGAPVAVWALVENEVGERFVVGLDPTAEGANGPGGRLIDVNRVVEEARGIAGGYAYRAPLS
Ga0190273_1006125923300018920SoilVAWTIIEIETASPGWRTSGAAGEDGSPVALWALVENESGERFVVGLDPTAEGMAGPGGRLIDANRLIAQIDTTEGGYIYRAPLS
Ga0190273_1007161133300018920SoilSTWHGGAVAWTIVEIETAAPGWRTSGTGGDDGAPVAVWALVENEVGERFVLGLDPTAEGATGPGGRLMDVNRLIAEIDDREGGYTYRAPLS
Ga0190273_1008502233300018920SoilVAWTIVEIETAAPGWRTSGTGGEDGAPVAVWALVENEVGDRFVLGLDPTAEGATGPGGRLMDVNRLIAEIDDGEGGYTYRAPLS
Ga0190273_1057583523300018920SoilVAWTVIEIETAAPGWRTSGAAGEDGSPVAVWALVENEAGERFVVGLDPTAEGAAGPGGRLIDVNRLIAQIDATEGGYIYRAPLS
Ga0184647_138934213300019263Groundwater SedimentVAWTIVEIETAAPGWRTSGGAGEDGAPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAELDTDAGGYLYRAPLS
Ga0190264_1193638323300019377SoilVAWTVIEIETAAPGWRTSGVAGEDGSPVAVWALVENEAGERFVVGLDPTAGGTTGPGGRLMDVNRLISEIDD
Ga0190267_1049482923300019767SoilVAWKIVEIETAAPGWRTRGAGNEDGAPVAVWALVENEAGERVVVGLDPTAEGTAGPGGRLIDVNRLISEIDTAEGGYIYRAPLS
Ga0190267_1081846013300019767SoilVAWTIVEIETAAPGWRTSGAGGEDGAPVALWALVQNEVGERVVVGLDPTAEGAGGPGGRLIDVNRLIAGIDSGEGGYIYRAPLS
Ga0190267_1158900613300019767SoilVAWTIIEIETASPGWRTSGAAGEDGSPVALWALVENESGERFVVGLDPTAEGMAGPGGRLIDANRLIAQIDTAEGGYIYRAPLS
Ga0206350_1140413213300020080Corn, Switchgrass And Miscanthus RhizospherePGSRVPTDHRRPPLAAARSPWHGGVVAWTIIEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAQGVGGPGARLIDVNRLIADLDDGPGAGYTYRAPLS
Ga0206354_1057332523300020081Corn, Switchgrass And Miscanthus RhizosphereVAWTIVEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAEGVGGRGARLIDVNRLIADIDDGPGAGYTYRAPLS
Ga0196965_104553923300020154SoilMAWKIIEIETAAPGWRTRGSRDEDGAPVAVWALVENADGARFVVGLDPTAEGNGGPGGRLIDVDALLAQVGDDEGGYLYRAPLS
Ga0207642_1113272213300025899Miscanthus RhizosphereVAWTIIEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAEGVGGRGARLIDVNRLIADIDDGPGAGYTYRAPLS
Ga0207643_1033954213300025908Miscanthus RhizosphereSPWHGGAVAWTIIEIETAAPGWRTRGAGDEDGAPVALWALVENEVGERLVVGVDPTAEGVGGRGARLIDVNRLIADLDDGPGAGYTYRAPLS
Ga0207705_1133800613300025909Corn RhizospherePGLATARSPWHGGAVAWTIIEIETAAPGWRTRGAGDEDGAPVALWALVENEVGERVVVGVDPTAEGTGGPGGRLIDANRLIAEIDDGEGGYTYRAPLS
Ga0207659_1024906613300025926Miscanthus RhizosphereWTIIEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAQGVGGPGARLIDVNRLIADLDDGPGAGYTYRAPLS
Ga0207687_1110856313300025927Miscanthus RhizospherePPLASARSPWHGGVVAWTIIEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAQGVGGPGARLIDVNRLIADLDDGPGAGYTYRAPLS
Ga0207690_1011152433300025932Corn RhizosphereVAWTIIEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAQGVGGPGARLIDVNRLIADLDDGPGAGYTYRAPLS
Ga0207706_1045401013300025933Corn RhizosphereAARCGPAVPCGSPGSRVPTDHRRPPLASARSPWHGGVVAWTIIEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAQGVGGPGARLIDVNRLIADLDDGPGAGYTYRAPLS
Ga0207689_1050004423300025942Miscanthus RhizosphereVAWTIIEIETAAPGWRTQGAGGEDGAPVALWALVENEVGQRLVVGVDPTAEGVGGLGGRLIDVNRLIAGIDDGPGVGYIYRAPLS
Ga0207661_1151136513300025944Corn RhizosphereRSTWHGSAVAWTIVEIETAAPGWRTSGGAGEDGAPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAEIDTDAGGYLYRAPLS
Ga0207668_1119651923300025972Switchgrass RhizosphereVAWTIVEIETAAPGWRTSGTGGDDGAPVAVWALVENEVGERFVLGLDPTAEGATGPGGRLMDVNRLIAEIDDREGGYTYRAPLS
Ga0207640_1042514733300025981Corn RhizosphereVAWTIIEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAEGVGGRGARLIDVNRLIADLDDGPGAGYTYRAPLS
Ga0207677_1071119433300026023Miscanthus RhizosphereVAWTIVEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAQGVGGPGARLIDVNRLIADLDDGPGAGYTYRAPLS
Ga0207677_1216093713300026023Miscanthus RhizospherePGWRTQGAGGEDGAPVALWALVENEVGQRLVVGVDPTAEGVGGLGGRLIDVNRLIAGIDDGPGVGYIYRAPLS
Ga0207678_1006791753300026067Corn RhizosphereARSPWHGGVVAWTIIEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAQGVGGPGARLIDVNRLIADLYDGPGAGYTYRAPLS
Ga0207641_1070268323300026088Switchgrass RhizosphereVAWTIIEIETAAPGWRTSGAAGDDGAPVAVWALVEDEAGRRFVVGVDPTAEGTAGPGGRLIDVDRLIEGIDAAEGGYIYRAPLS
Ga0207698_1021989733300026142Corn RhizosphereVAWTIVEIETAAPGWRTQGAGGEDGAPVALWALVENEVGERLVVGVDPTAEGVGGRGARLIDVNRLIADLDDGPGAGYTYRAPLS
Ga0209461_1000924233300027750AgaveVAWKIIEIETAAPGWRTRGSGPDEDGAPVAVWALVENDSGERLVVGLDPTADGADGPGGRLLDVNRVIAEVGQAVGGYTYRAPLS
Ga0268266_1128085523300028379Switchgrass RhizosphereAAPGWRTSGTGGDDGAPVAVWALVENEVGERFVLGLDPTAEGATGPGGRLMDVNRLIAEIDDREGGYTYRAPLS
Ga0268266_1231273713300028379Switchgrass RhizosphereVAWTIVEIETAAPGWRTSGGAGEDGAPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAEIDTDAGGYLYRAPLS
Ga0247821_1096907123300028596SoilPGWRTRGAGDDDGAPVALWALVENEVGERVVVGVDPTAEGTGGPGGRLIDANRLIAEIDDGEGGYTYRAPLS
Ga0307315_1020011823300028721SoilVAWTIVEIEAAAPGWRTSGGAGEDGAPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAEIDTDAGGYLY
Ga0307316_1022057523300028755SoilVAWTIVEIEAAAPGWRTSGGAGEDGAPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAEIDTDAGGYLYRAPLS
Ga0247826_1102512023300030336SoilARPRSSWHGSAVAWTIIEIETAAPGWRTRGAGDEDGAPVALWALVENEVGERVVVGVDPTAEGTGGPGGRLIDANRLIAEIDDGEGGYTYRAPLS
Ga0247826_1105536613300030336SoilGLATARSPWHGGAVAWTIIEIETAAPGWRTRGAGGEDGAPVALWALVENEVGERVVVGVDPTAEGTGGPGGRLIDANRLIAEIDDGEGGYTYRAPLS
Ga0268253_1026913623300030514AgaveVAWTIVEIETAAPGWRTSGAAGDDGAPVAMWALVENEVGDRFVLGLDPTAEGTAGPGGRLIDVNRLIAEIDDGQGGYTYRAPLS
Ga0307508_1049196713300031616EctomycorrhizaHGGAVAWTIVEIETAAPGWRTSGGAGEDGAPVALWALVENEVGDRFVLGLDPTAEGTMGPGGRLIDVNRLITEIDTDAGGYLYRAPLS
Ga0307410_1103561323300031852RhizosphereVAWKIIEIETATPGWRTRGGPEEDGAPVAVWALVENDVGERLVVGIDPTADGANGPGGRLIDVNRVIEEVRGIVGGYTYRAPLS
Ga0310904_1093690923300031854SoilVAWTIVEIETAAPGWRTSGGADDDGAPVALWALVENEVGDRYVLGLDPTAEGMVGPGGRLIDVNRLIAELDTDAGGYLYRAPLS
Ga0307406_1051826533300031901RhizosphereVAWTIVEIETAAPGWRTSGTGGEDGAPVAVWALVENEVGERFVLGLDPTAEGATGPGGRLMDVNRLIAEIDDGEGGYIYRAPL
Ga0310900_1007659933300031908SoilVAWTIVEIETAAPGWRTSGGAGDDGAPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAELDTDAGGYLYRAPLS
Ga0307416_10133240923300032002RhizosphereVAWTIVEIETAAPGWRTSGTGGEDGAPVAVWALVENEVGERFVLGLDPTAEGATGPGGRLMDVNRLIAEIDDGEGGYIYRAPLS
Ga0326721_1002052543300032080SoilVAWTIIEIETAAPGWRTRGAGGDDGAPVALWALVENEVGERVVLGLDPTAEGTGGPGGRLIDVNRLIAEIDDGEGGYTYRAPLS
Ga0326721_1003934623300032080SoilVAWTIIEIETAAPGWRTRGAGDEDGAPVALWALVENEVGERVVVGVDPTAEGTGGPGGRLIDANRLIAEIDDGEGGYTYRAPLS
Ga0326721_1114569213300032080SoilVAWTIVEIETAAPGWRTSGAGGDDGAPVALWALVENEVGERVVVGIDPTAEGMGGPGGRLIDVNRLIAGIDSGEGGYIYRAPLS
Ga0307415_10228214423300032126RhizosphereVAWKIIEIETATPGWRTRGGPEEDGAPVAVWALVENDVGERLVVGIDPTADGANGPGGRLIDVNRVIEEVRGIVGGYTYR
Ga0247830_1008439413300033551SoilHGSAVAWTIVEIETAAPGWRTSGGAGEDGAPVALWALVENEVGDRFVLGLDPTAEGMVGPGGRLIDVNRLIAEIDTDAGGYLYRAPLS
Ga0334924_027791_54_3023300033989Hypolithic BiocrustVTWKIIEIETAAPGWRTRGGPHEDGAPIALWALVENDAGERLVVGLDPTTEDGPGGRLIDVDRLVGRVADVDDGYTYRAPIS
Ga0334926_046067_3_2423300034004Hypolithic BiocrustIEIETAAPGWRTSGAKGEDGSPVAVWALVENEDGERFVVGLDPTAEGAAGPGGRLIDVNRLIAQIDATEGGYIYRAPLS
Ga0334934_055073_39_2933300034006BiocrustVAWTVIEIETAAPGWRTSGVAGEDGSPVAVWALVENEAGERFVVGLDPTAEGVGGPGGRLIDVNRLIAQIDATEGGYIYRAPLS
Ga0334951_066324_2_2503300034029BiocrustWTVIEIETAAPGWRTSGAAGDDGSPVAVWALVENEAGERFVVGLDPTAEGAAGPGGRLIDVNRLIAQIDATEGGYIYRAPLS
Ga0334916_002786_1526_17713300034133Hypolithic BiocrustTWKIIEIETAAPGWRTRGGPHEDGAPIALWALVENDAGERLVVGLDPTTEDGPGGRLIDVDRLVGRVADVDDGYTYRAPIS
Ga0334956_102612_100_3543300034139BiocrustVAWTIVEIETAAPGWRTSGTGGDDGAPVAVWALVENEVGERFVLGLDPTAEGATGPGGRLMDVNRLIAEIDDCEGGYTYRAPLS
Ga0334925_110854_51_3053300034173Hypolithic BiocrustVAWTIIEIETAAPGWRTQGGPNEDGAPVAVWALVENEAGERVVVGLDPTAEGSVGPGGRLIDVNRLVAGVAATEGGYVYRAPLS
Ga0334937_090312_550_8043300034221BiocrustVAWTVIEIETAAPGWRTSGVAGEDGSPVAVWALVENEAGERFVVGLDPTAEGAAGPGGRLIDVNRLIAQIDATEGGYIYRAPLS
Ga0334937_093948_1_2433300034221BiocrustVTWKIIEIETAAPGWRTRGGPHEDGAPIALWALVENDAGERLVVGLDPTTEDGPGGRLIDVDRLVGRVADVDDGYTYRAPI

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Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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