NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F062848

Metagenome Family F062848

Go to section:
Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F062848
Family Type Metagenome
Number of Sequences 130
Average Sequence Length 39 residues
Representative Sequence MWNLTSFSLEIVLVSVQDRCTVCAKRTIGSEIILDAPF
Number of Associated Samples 65
Number of Associated Scaffolds 130

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 60.00 %
% of genes near scaffold ends (potentially truncated) 6.15 %
% of genes from short scaffolds (< 2000 bps) 7.69 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere
(88.462 % of family members)
Environment Ontology (ENVO) Unclassified
(89.231 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(89.231 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.00%    β-sheet: 0.00%    Coil/Unstructured: 50.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005338|Ga0068868_100509076Not Available1055Open in IMG/M
3300005718|Ga0068866_10675771Not Available706Open in IMG/M
3300015299|Ga0182107_1027151Not Available750Open in IMG/M
3300015300|Ga0182108_1103675Not Available507Open in IMG/M
3300015342|Ga0182109_1196310Not Available528Open in IMG/M
3300015355|Ga0182159_1174744Not Available681Open in IMG/M
3300015361|Ga0182145_1094978Not Available640Open in IMG/M
3300017404|Ga0182203_1027670Not Available878Open in IMG/M
3300017424|Ga0182219_1003712Not Available1764Open in IMG/M
3300017443|Ga0182193_1170700Not Available529Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Miscanthus PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere88.46%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere6.15%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.31%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.54%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.77%
PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere0.77%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300009036Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015268Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015269Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015274Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015276Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015279Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015281Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015282Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015286Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015288Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015289Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015292Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015294Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015295Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015296Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015298Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015299Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015300Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015303Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015304Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015307Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015308Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015322Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015323Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015341Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015342Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015343Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015344Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015345Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015346Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015347Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015351Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015355Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015361Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017404Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017407Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017409Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017410Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017411Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017413Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017415Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017417Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017420Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017424Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017425Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017427Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017438Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017442Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017443Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017680Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017683Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017684Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017685Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017686Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017690Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300021060Phyllosphere microbial comminities from miscanthus, Michigan, USA - G6R3_NF_07NOV2016_LD2 MGHost-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0068868_10050907623300005338Miscanthus RhizosphereVTWVMWDLTSFSLETVLVSVQDRSTVCAKRTIGSEIILDAPDGTPR*
Ga0068868_10135394513300005338Miscanthus RhizosphereVTWVVWNLVLVHLEVVLASVEDRCTVCTNCTIGSEIILDA
Ga0068866_1067577113300005718Miscanthus RhizosphereMTWVMLNLVLIRLETVLVSVQDRCTVCAKHTIGSEIILDAPD
Ga0068866_1143392723300005718Miscanthus RhizosphereMWNLVLVRLETVLVSVQDRCTVCTKCTIGSEIILNAP
Ga0068870_1017924513300005840Miscanthus RhizosphereMWNLTYFSLEIVLVSVQDWCTVSAKRTIDSEIILDAPNGTPR*
Ga0068870_1115671213300005840Miscanthus RhizosphereMWDLTSFSLETVSVLVQDRCTVCAKRTIGSEIFLDTPDIT
Ga0097621_10207310613300006237Miscanthus RhizosphereMTWVMLNLVLIRLETVLVSVQDRCTVCAKHTIGSEIILDA
Ga0068865_10063275313300006881Miscanthus RhizosphereMWNLTSFSLEIVLVSVQDRCTVCAKRTIGSEIILDAPF
Ga0105244_1025304813300009036Miscanthus RhizosphereMWNLFSVHLEAVLVSVQDRCTICAECTIGSEIILDAPN
Ga0105244_1031674613300009036Miscanthus RhizosphereMWNLVSVRLEKVLVSVQDRCTVCTKCIIGSKIFSDAPDG
Ga0105245_1294880813300009098Miscanthus RhizosphereVTWVIWNLVSVRLQTVLVSVQDRCTVCAKCTKGIEIISDAP
Ga0157378_1243263113300013297Miscanthus RhizosphereMWNLSSFSLEIVLVSVQDRCTVCAKRTIDSEIILD
Ga0157377_1107369113300014745Miscanthus RhizosphereMWNLTSFSLEIVLVSVQDRCTVCAKRTIGLEIVWDAPDGTP
Ga0182154_106051813300015268Miscanthus PhyllosphereMWNLVLVCLEIGLVLVQDRCTVCAKRTIGSEIALEAPDG
Ga0182154_107410813300015268Miscanthus PhyllosphereVTWVRWNLVLVHLETVLVSVQDRYTVCTKCTLDSEI
Ga0182113_109528513300015269Miscanthus PhyllosphereKFVLVLFEIVLILKQDRSTVCTERTIGLKIISDAPDGTPR*
Ga0182188_100591013300015274Miscanthus PhyllosphereVTWDMWNLVSVRLETVLVSVQDRCTVCTERTTGSGV
Ga0182188_103530113300015274Miscanthus PhyllosphereMWNLTYFSLERVLVSVQDRCMVCAKHTIDSEIILDEPDGTTR*
Ga0182188_104664713300015274Miscanthus PhyllosphereMWNLLSVRLETVLVSVQDRCMVCAKCTIGSEIILD
Ga0182170_103303723300015276Miscanthus PhyllosphereMWNLTSFSLETVLVSVPDRCAVCAKRTIGSEIILNALYGT
Ga0182174_101731223300015279Miscanthus PhyllosphereWNLTSFSLETVLVSVPDRCAVCAKRTIGLEIVLNGLYGTTR*
Ga0182160_107125523300015281Miscanthus PhyllosphereVTGVKWNLLSVHLETVLVSVQDRCTVCAKCTIGSEIVSDAPDG
Ga0182124_101944713300015282Miscanthus PhyllosphereMWNLVLVHLETVLVSVQDRCTVCAKHTIGSKIVLD
Ga0182124_103283213300015282Miscanthus PhyllosphereMWNLVLFRSETVLVSVQDRCTVCAKRTIGSEIILDAPDG
Ga0182176_104362913300015286Miscanthus PhyllosphereSFSLEIVLVSVQDRCTVCAKRTIDSEIILDEPDSTTR*
Ga0182176_104927413300015286Miscanthus PhyllosphereMWNLVSVRLEIVFVWVQDRCTVCTKHAIGSEIILDA
Ga0182173_105210613300015288Miscanthus PhyllosphereMWDLTSFSSETVLLSVQDRSTVCAKRTIGSEIILDAPDGTP
Ga0182138_104535113300015289Miscanthus PhyllosphereLEIVLVSVQDRCTVCAKRTIDSEIILDEPDSTTR*
Ga0182138_107114213300015289Miscanthus PhyllosphereMWNVTYFSLEIVLVLVQDRCTVSAKRTIDLEIILD
Ga0182141_101951013300015292Miscanthus PhyllosphereMWNLDLVRLETVLVSVQDRCTVCTKRTIGSEIVLDTPNGTSR
Ga0182141_102079113300015292Miscanthus PhyllosphereWNLVLVRLETVLVSVQDRCTVCTKCTVGSEIILDAPNGTPR*
Ga0182141_105620013300015292Miscanthus PhyllosphereMWNFNSVCLKTVLVSVQDRCTVCAKRTIGSEIVLDTPD
Ga0182126_109281413300015294Miscanthus PhyllosphereMWNIVSVRLETVLVSVQDRCTVCAKRTISSEFILD
Ga0182175_100179913300015295Miscanthus PhyllosphereMWNLSSFSLEIVLVSVQDRCTVCAKRTIDSEIILDEP
Ga0182157_105354913300015296Miscanthus PhyllosphereMWNLLSVRLETVLVSVQDRCMVCTKCIIGSKSFQTHP
Ga0182106_107599913300015298Miscanthus PhyllosphereMWNLTSFALEIVLVSVQDRCTVCAKRTIGLEIVWDAPD
Ga0182106_109832913300015298Miscanthus PhyllosphereVTWVRWNLVLVRLETVLVSVQDRCTVCTKCTIGSEIILDAPDGTP
Ga0182106_110277913300015298Miscanthus PhyllosphereMMWVKWNLTSFHLETVLVSVQDRCTVCAKRTIGSEIILDAPD
Ga0182107_102715123300015299Miscanthus PhyllosphereWVMWNLTSFSLETVLVSVLDRCAVCAKHTIGSEIILNALDGTTR*
Ga0182107_106972913300015299Miscanthus PhyllosphereMWNVVPVRLETVLVLVQGRCTVCTKCIIGSKIISDTPD
Ga0182108_105536613300015300Miscanthus PhyllosphereMWNLTSFHLEIVLGSVQDRCTVCAKRTIGSEIILDAPDRTTR
Ga0182108_110367513300015300Miscanthus PhyllosphereLVIVFVSGQDRCTVCAKRTIDSEIILDAPDRTTR*
Ga0182123_104576413300015303Miscanthus PhyllosphereMWVMWNLTSFSLEIVLVSVQDRCTVCAKRTIGLEIV
Ga0182112_106864713300015304Miscanthus PhyllosphereVMWDLTSFSLETVSVLVQDRFMVYARRTIGLEIILDAPDGTPR*
Ga0182112_108715323300015304Miscanthus PhyllosphereMWDLTSFLVETVLVSVQDSCTVCAKCTIRSEIILDAPD
Ga0182144_100874313300015307Miscanthus PhyllosphereMWNLDSVHLETVLVSVQDRCTVCTKRTIGSEIILDT
Ga0182144_102723113300015307Miscanthus PhyllosphereVTWVRWNLVLVRLETVLVSVQDRCTVCTKCIVGSEIVLDAPDA
Ga0182144_107288713300015307Miscanthus PhyllosphereMWVMWNFTSFYLEIVLVSVQDRCTVCAKRTIGLEIVWDAPDYTHR
Ga0182142_101745313300015308Miscanthus PhyllosphereVTWVVWNLISVRVETVLVSVQDRCTVCTKRTIGSEIALD
Ga0182142_110027113300015308Miscanthus PhyllosphereMWNVDSVRLEAVLVSVQDRCTVCAKRTIGSETFWTH
Ga0182110_100153413300015322Miscanthus PhyllosphereMWNLSSFSLEIVLVSVQDRCTVCAKRTIDSEIILDEPDSTTR*
Ga0182110_109161813300015322Miscanthus PhyllosphereVTWVRWNLVLLRLETVLVSVQDRCTVCTKCTIGSEIVLDAPDG
Ga0182129_110378223300015323Miscanthus PhyllosphereMWNLTSFSLETVSVLVQDRCMVCAKRTIGSEIFLDKPD
Ga0182187_103790313300015341Miscanthus PhyllosphereMWNLTSFSLETLLLSVQDRCTVCAKRTIGSEIVLDAPDGTTRY
Ga0182187_114935613300015341Miscanthus PhyllosphereMWNLTYFLLEIVLVSVQDRCTVCAKRTIDSEIILDALDGTTR*
Ga0182187_115257823300015341Miscanthus PhyllosphereMWNLTSLSVEIVLVSVQDRCTVSAKRTIDSDIILD
Ga0182187_118287713300015341Miscanthus PhyllosphereMWNLISICLEIVLVSVQDRCTVCAKRTIGSEIILDATD
Ga0182109_109058613300015342Miscanthus PhyllosphereMWVLWNLNSVRLETVLVSVQDRCTVCAKRTIGSETILDS
Ga0182109_119631023300015342Miscanthus PhyllosphereWAMWNLVSVRLEIVFVWVQDRCTVCTKHAIGSEIILDALDGTPR*
Ga0182155_117764013300015343Miscanthus PhyllosphereVTRVMWNVCSFHLEVVLASVQDRCMVCTRHTIGSEIVLV
Ga0182155_118910213300015343Miscanthus PhyllosphereMWNLLSVRLEIVLVSVQDRCTVCAKCTIGSEIVLDAPDGT
Ga0182189_117819413300015344Miscanthus PhyllosphereVTWVKWNLLSVCLEIVLVSVQDRCTVCAKCTIGSEIVSDAPDG
Ga0182189_120616513300015344Miscanthus PhyllosphereMWDLISFSLEIVLASVQDRCTVCAKRTIGSEIILDAP
Ga0182189_122249013300015344Miscanthus PhyllosphereMWNLTYFSLEIVLVSVQDRCTVCAKRTIDSEIILDALDVTTR*
Ga0182111_100959913300015345Miscanthus PhyllosphereMWNLVLVRVETVLVSVQDRCTVCTKRTIGSEIALDAS
Ga0182111_117318913300015345Miscanthus PhyllosphereVTWIKLKLVLVRLEIVLILVQNRCTVCAKHTIGSAI
Ga0182111_121885813300015345Miscanthus PhyllosphereGDVGHVDLTSFSLEIVLVSVHDRCTVCANCTIGLEIILDAHDCTPR*
Ga0182139_105731613300015346Miscanthus PhyllosphereMTWVMLNLVLIRLETVLVSVQDRCTVCAKHTIGSEI
Ga0182139_112188613300015346Miscanthus PhyllosphereMWNLISVRLEIVLVSVQDRCTVCTKHTIGLEIILDA
Ga0182139_116798323300015346Miscanthus PhyllosphereMWNLISLSLEIVLVSVQDRCTVSAKRTIDSDIILD
Ga0182139_118850213300015346Miscanthus PhyllosphereVTWVGWNLVLVRLETVLVSVQDRCTVCTKCIVGSEIVLDAPDATLR*
Ga0182139_121704013300015346Miscanthus PhyllosphereVTWVRWNLVLVHLEMVLVSVQDRCTVCTKCTIGSEIVLD
Ga0182139_123554923300015346Miscanthus PhyllosphereWVMWDLTSFSLETVLVLVQDRSTVCAKRTIALGIAYDAPDGTPR*
Ga0182177_113521813300015347Miscanthus PhyllosphereMWNLDSVRLETVLVSVQDRCTVCTKRTIGSEIILD
Ga0182177_122046513300015347Miscanthus PhyllosphereMWSRVSVRLETVLVSVQDRCTVCAKRSISSEIVLDA
Ga0182161_117353313300015351Miscanthus PhyllosphereMWNLTSFSLDILLVSVQDRCTVYAKRTIGSEIILDA
Ga0182161_117749313300015351Miscanthus PhyllosphereMWVTWNLTSFSLEIVLVSVQDRCTVCAKRTIGLEI
Ga0182161_120940013300015351Miscanthus PhyllosphereMWNLAFICLEMVLASVQDRCTVSAKCTIGSEILLDAPDGTPRQCG
Ga0182161_121485513300015351Miscanthus PhyllosphereVTWVMWDLTSFSLETVLVSVQDRSTVCAKRTIGSEIGLDAPVGTPR*
Ga0182159_114717713300015355Miscanthus PhyllosphereSFSLEIVLVSVQDRCTVCANRTIDSEIILDAPDGTPR*
Ga0182159_117474423300015355Miscanthus PhyllosphereMVTWVMWNLTPFSLDIVLVSVQDRCTVCAKCTIGSEIILDAPVGTP
Ga0182159_122247823300015355Miscanthus PhyllosphereLEIVLVLVQDRCTVCAKRTIDSEIILDAPDGTTR*
Ga0182159_123612013300015355Miscanthus PhyllosphereNLTYFSLEIVLVSVQDRCTVSAKRTIDSEIILDALDVTTR*
Ga0182145_105282913300015361Miscanthus PhyllosphereWNLTSFSLEIVLVSVQDRCTVCAKRTIDSEIILDAPDGTTR*
Ga0182145_108800113300015361Miscanthus PhyllosphereMWNLTSLSLEIVLVLVQDRCTVSAKRTIVSDIILDAPDG
Ga0182145_109497813300015361Miscanthus PhyllosphereVTWVMWNLISVCLETVLVSVQDRCMVCTKRTIDSEIILDAP
Ga0182145_111762323300015361Miscanthus PhyllosphereMWNLTSLSLEIVLVSVQDRCTVSAKRTINSDIILDAPDGTTR
Ga0182145_119593413300015361Miscanthus PhyllosphereVTWVVWNLVSVRLETVLVSVQDRCTVCAKRTIGSEIV
Ga0182203_102767023300017404Miscanthus PhyllosphereMWNLTSFSLETVLVSVQDRCTVCAKRTIGSEIVLD
Ga0182203_109004913300017404Miscanthus PhyllosphereMWNLVLVPLETVLVSVRDRWTVCAKCTIGSEIISDAPDGTP
Ga0182220_110982413300017407Miscanthus PhyllosphereMWNLDLVRLETVLVSVQDRCTVCTKRTIGSEIVLDTPN
Ga0182204_101800913300017409Miscanthus PhyllosphereVTWVRWNLVLVHLETVLVSVQDRCTVYTKCPVGSE
Ga0182207_106909713300017410Miscanthus PhyllosphereVTWVRWNLVLVHLETVLVSVQDRCTVCTKCPVGSEIILDAPN
Ga0182208_106726313300017411Miscanthus PhyllosphereNSSVTWVMWNLVLVYLEVVLVFVQDRCTVYAKCTIAS
Ga0182222_100093113300017413Miscanthus PhyllosphereMWNLSSFSLEIVLVSVQDRCTVCAKRTIDSEIILDEPGSTTR
Ga0182202_101093623300017415Miscanthus PhyllosphereVMWNLTSFSLETVLVSVQDRCTVCAKRTIGSEIVLDALDGTTR
Ga0182202_112883813300017415Miscanthus PhyllosphereVTWVRWNLVLVRLETVLVSVQDRCTVCTKCIVGSEIVLD
Ga0182230_104621323300017417Miscanthus PhyllosphereMWNLVLFRSETVLVSVQDRCTVCAKRTIGSEIILDA
Ga0182230_111376713300017417Miscanthus PhyllosphereMWDLTSFSLETVLVSVQDRSTICVKRTIGSEIILDGPDGTPR
Ga0182228_111192313300017420Miscanthus PhyllosphereTSFSLETVSVLVQDRCMVCAKCTIGSEIFLDTPDITPR
Ga0182219_100371223300017424Miscanthus PhyllosphereMWNLSSFSLEIVLVSVQDRCTVCAKRTIDSEIILDEPDSTTR
Ga0182219_104987613300017424Miscanthus PhyllosphereMWILWNLVSLCLETVLVSVQDRCTVCAKRTIGLEI
Ga0182224_104318723300017425Miscanthus PhyllosphereMWNLVSVRLEIVFVWVQDRCTVCTKHAIGSEIILDALDG
Ga0182224_106657013300017425Miscanthus PhyllosphereWIMWNLVLLRLERVLVSMQDRCTDCAERTIGLEIILDALDDSPR
Ga0182224_114277113300017425Miscanthus PhyllosphereMSNLVSVRSETVLVSVQDRCMVCTKCTIGSEIILDAPDGT
Ga0182190_104881313300017427Miscanthus PhyllosphereMWNLVLVRLETVLVSVQDRCTVCTKCTIGSEIILNAPDG
Ga0182191_108843623300017438Miscanthus PhyllosphereWNLTSFSLEIVLVSVQDRCTVCAKRTIGLEIVWDTPDGTPR
Ga0182221_101545613300017442Miscanthus PhyllosphereMWNLVLVRLEIKLVSVQDRSTVCTKCIIGSKIILDAPH
Ga0182221_101567413300017442Miscanthus PhyllosphereVTWVMWNLTSFSLEIVLVSVQDRCTVCAKRTIDSEIILDAPDGTTR
Ga0182221_112954123300017442Miscanthus PhyllosphereMWNLTSFSLETVLVSVPDRCAVCAKRTIGSEIILNA
Ga0182193_104236813300017443Miscanthus PhyllosphereMWNLTSLSLEIVLVSVQDRCMDCAKRTIDSKIIFNA
Ga0182193_110360213300017443Miscanthus PhyllosphereVTWVMWNLTSFSLEIVLVSVQDRCTVCAKRTIGSEIILDAPF
Ga0182193_112466713300017443Miscanthus PhyllosphereMWVTWNFVSIRLEIVFVSVQDRCTVFAKRTIGSEIILD
Ga0182193_117070023300017443Miscanthus PhyllosphereMWDLTSFSLETVLVSVQDRCMVCAKRTIGLEIILDA
Ga0182233_105487213300017680Miscanthus PhyllosphereVTWVTWNLASVRSETVLVSVQDRCTVCAKRTIGSRIVLDAPDG
Ga0182233_106582313300017680Miscanthus PhyllosphereVRLEIVLVSVQDMCTVCTKCIIGSKIISDAPDGTPR
Ga0182218_102032513300017683Miscanthus PhyllosphereTSFSLEIVLVSVQDRCTVCAKRTIDSEIILDAPDGTTS
Ga0182218_103657913300017683Miscanthus PhyllosphereMWNVVSVHLEIVLVSVQDRCMVCTKCIIGSKIISDAP
Ga0182218_105713813300017683Miscanthus PhyllosphereMVTWVMWNLTSFSLDIVLVSMQDRCTVCAKRTISLEII
Ga0182218_107129713300017683Miscanthus PhyllosphereSLEIVLVSVQDWCTVSAKRTIDSEIILDAPDGTPR
Ga0182225_103279513300017684Miscanthus PhyllosphereVTWVGWNLVSVRLETVLVSVQDRCTVCAKRTIGSEII
Ga0182225_104689613300017684Miscanthus PhyllosphereTWVMWNLTYFSLETVLVSVQDRCMVCAKHTIDSEIILDEPDGTTR
Ga0182225_107151913300017684Miscanthus PhyllosphereVTWVRWNLVLVHLETVLVSVQDRCTVCAKRTIGSGIILDA
Ga0182225_107229713300017684Miscanthus PhyllosphereMWNLTSFHLETVLLSVQDRCTVCAKRTIGSEIVLDAPDGTT
Ga0182227_103943323300017685Miscanthus PhyllosphereMLDLTSFSLETLLVSVQNRCMVCAKRTIGSEIILDAPD
Ga0182227_112641613300017685Miscanthus PhyllosphereMWNVVSVCLEIVLGSVQDRCTVCTKCIIGSKIISDTPDG
Ga0182205_116856913300017686Miscanthus PhyllosphereVTWVGWNLVFVCLETVLVSVQDRCTVCTKCIVGSEIVLDAPDATL
Ga0182223_105501313300017690Miscanthus PhyllosphereVTWVRWNLVLLRLETVLVSVQDRCTVCTKCTIGSEIVLDA
Ga0182232_106686013300021060PhyllosphereMWNLTSFGLEEVLVSVQDRCTLCAKRTISSEIVLDA
Ga0207677_1117412123300026023Miscanthus RhizosphereMWNLTSFSLETVLVLVPDSCAVCAKRTIGSEIILNALD

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.