Metagenome / Metatranscriptome Family F062858

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062858
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	117 residues
Representative Sequence	MQYTIGADPEFLRVEVSGRDTDIPPSALCAQVLAESERLERPRILIELDQKFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPVAQMANQYIDMLAERRMLMVRNFRDVEQAKDWLRTR
Number of Associated Samples	105
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	57.36 %
% of genes near scaffold ends (potentially truncated)	48.46 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.84

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.308 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (10.769 % of family members)
Environment Ontology (ENVO)	Unclassified (35.385 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (35.385 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.14% β-sheet: 20.27% Coil/Unstructured: 44.59%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.84
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.84
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SCOP family	SCOP domain	Representative PDB	TM-score
c.13.2.1: Anti-sigma factor antagonist SpoIIaa	d1vc1a_	1vc1	0.64993
c.14.1.2: Tail specific protease, catalytic domain	d1j7xa_	1j7x	0.64785
c.13.2.1: Anti-sigma factor antagonist SpoIIaa	d1th8b_	1th8	0.6393
c.1.9.17: Imidazolonepropionase-like	d2puza2	2puz	0.63912
c.1.23.2: Proline dehydrohenase domain of bifunctional PutA protein	d1tj2a2	1tj2	0.63806

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF02219	MTHFR	39.23
PF00266	Aminotran_5	13.08
PF00563	EAL	9.23
PF04307	YdjM	6.15
PF08546	ApbA_C	3.85
PF02776	TPP_enzyme_N	1.54
PF11964	SpoIIAA-like	0.77
PF00990	GGDEF	0.77
PF02965	Met_synt_B12	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0685	5,10-methylenetetrahydrofolate reductase	Amino acid transport and metabolism [E]	39.23
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	9.23
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	9.23
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	9.23
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	9.23
COG1988	Membrane-bound metal-dependent hydrolase YbcI, DUF457 family	General function prediction only [R]	6.15
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	3.85
COG1410	Methionine synthase I, cobalamin-binding domain	Amino acid transport and metabolism [E]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.31 %
Unclassified	root	N/A	7.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.31 %
Unclassified	root	N/A	7.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.31 %
Unclassified	root	N/A	7.69 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	86.92 %
Unclassified	root	N/A	7.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.54 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	71.54 %
Unclassified	root	N/A	7.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.54 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.77 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.77 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.69 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.54 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.77 %
Usitatibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae	0.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.69 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.54 %
Usitatibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter	0.77 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.69 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1.54 %
Usitatibacter rugosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter rugosus	0.77 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.69 %
Nocardioides halotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides halotolerans	1.54 %
Usitatibacter rugosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter rugosus	0.77 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17375852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3992	Open in IMG/M
2088090015\|GPICI_8693165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1250	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101325525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	600	Open in IMG/M
3300000881\|JGI10215J12807_1021589	All Organisms → cellular organisms → Bacteria → Proteobacteria	1948	Open in IMG/M
3300000891\|JGI10214J12806_10885508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	579	Open in IMG/M
3300004022\|Ga0055432_10038019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1101	Open in IMG/M
3300004114\|Ga0062593_101542485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	718	Open in IMG/M
3300004156\|Ga0062589_102618658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	524	Open in IMG/M
3300004156\|Ga0062589_102850044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	505	Open in IMG/M
3300004157\|Ga0062590_101254217	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300004281\|Ga0066397_10042623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	788	Open in IMG/M
3300004463\|Ga0063356_100393952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1777	Open in IMG/M
3300004463\|Ga0063356_101460961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1010	Open in IMG/M
3300004479\|Ga0062595_102563369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides halotolerans	510	Open in IMG/M
3300005162\|Ga0066814_10079456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	587	Open in IMG/M
3300005168\|Ga0066809_10125474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	648	Open in IMG/M
3300005169\|Ga0066810_10085029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	678	Open in IMG/M
3300005183\|Ga0068993_10042779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1286	Open in IMG/M
3300005289\|Ga0065704_10461487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	697	Open in IMG/M
3300005294\|Ga0065705_10135835	All Organisms → cellular organisms → Bacteria	2288	Open in IMG/M
3300005294\|Ga0065705_11124621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides halotolerans	517	Open in IMG/M
3300005332\|Ga0066388_102376618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	961	Open in IMG/M
3300005332\|Ga0066388_103638410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	787	Open in IMG/M
3300005332\|Ga0066388_107799986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	536	Open in IMG/M
3300005336\|Ga0070680_101937795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	511	Open in IMG/M
3300005343\|Ga0070687_100476374	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300005364\|Ga0070673_101354729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	669	Open in IMG/M
3300005365\|Ga0070688_100646106	All Organisms → cellular organisms → Bacteria → Proteobacteria	814	Open in IMG/M
3300005445\|Ga0070708_101308908	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300005563\|Ga0068855_100563675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1232	Open in IMG/M
3300005577\|Ga0068857_101384018	All Organisms → cellular organisms → Bacteria → Proteobacteria	684	Open in IMG/M
3300005618\|Ga0068864_102176554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	561	Open in IMG/M
3300005713\|Ga0066905_100545474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	972	Open in IMG/M
3300005840\|Ga0068870_10209642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1186	Open in IMG/M
3300006237\|Ga0097621_100735198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	910	Open in IMG/M
3300006575\|Ga0074053_11907123	All Organisms → cellular organisms → Bacteria → Proteobacteria	971	Open in IMG/M
3300006578\|Ga0074059_11951449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	751	Open in IMG/M
3300006581\|Ga0074048_12626080	All Organisms → cellular organisms → Bacteria → Proteobacteria	731	Open in IMG/M
3300006605\|Ga0074057_10038651	All Organisms → cellular organisms → Bacteria → Proteobacteria	527	Open in IMG/M
3300006606\|Ga0074062_13023480	All Organisms → cellular organisms → Bacteria → Proteobacteria	1364	Open in IMG/M
3300006871\|Ga0075434_101345805	All Organisms → cellular organisms → Bacteria → Proteobacteria	725	Open in IMG/M
3300007255\|Ga0099791_10070236	All Organisms → cellular organisms → Bacteria → Proteobacteria	1587	Open in IMG/M
3300009094\|Ga0111539_13231904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	525	Open in IMG/M
3300009098\|Ga0105245_12936974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	528	Open in IMG/M
3300009148\|Ga0105243_11806873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	642	Open in IMG/M
3300009162\|Ga0075423_10487053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1297	Open in IMG/M
3300009162\|Ga0075423_11653405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	689	Open in IMG/M
3300010046\|Ga0126384_10190828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1614	Open in IMG/M
3300010047\|Ga0126382_10480241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	993	Open in IMG/M
3300010047\|Ga0126382_11453166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	628	Open in IMG/M
3300010400\|Ga0134122_12468152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	568	Open in IMG/M
3300011106\|Ga0151489_1237429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	597	Open in IMG/M
3300011107\|Ga0151490_1749477	Not Available	1244	Open in IMG/M
3300011437\|Ga0137429_1148853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	725	Open in IMG/M
3300011439\|Ga0137432_1017182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2067	Open in IMG/M
3300011445\|Ga0137427_10009808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3818	Open in IMG/M
3300012143\|Ga0137354_1083187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	509	Open in IMG/M
3300012167\|Ga0137319_1051914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	823	Open in IMG/M
3300012519\|Ga0157352_1043651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	643	Open in IMG/M
3300012913\|Ga0157298_10449124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	505	Open in IMG/M
3300012922\|Ga0137394_10100923	All Organisms → cellular organisms → Bacteria → Proteobacteria	2431	Open in IMG/M
3300012948\|Ga0126375_10673232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	801	Open in IMG/M
3300012957\|Ga0164303_10078308	Not Available	1568	Open in IMG/M
3300012960\|Ga0164301_10256650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1151	Open in IMG/M
3300012961\|Ga0164302_10266609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1098	Open in IMG/M
3300012989\|Ga0164305_11557576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	588	Open in IMG/M
3300014745\|Ga0157377_10089493	All Organisms → cellular organisms → Bacteria → Proteobacteria	1815	Open in IMG/M
3300014868\|Ga0180088_1038325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	804	Open in IMG/M
3300014968\|Ga0157379_12432370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	523	Open in IMG/M
3300015371\|Ga0132258_12244423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	1370	Open in IMG/M
3300015371\|Ga0132258_13832907	Not Available	1024	Open in IMG/M
3300015373\|Ga0132257_100925552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1094	Open in IMG/M
3300015373\|Ga0132257_101430046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	881	Open in IMG/M
3300015373\|Ga0132257_103100470	Not Available	605	Open in IMG/M
3300018083\|Ga0184628_10061783	Not Available	1897	Open in IMG/M
3300018422\|Ga0190265_10320669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1627	Open in IMG/M
3300018422\|Ga0190265_11597692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	764	Open in IMG/M
3300021082\|Ga0210380_10087472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1370	Open in IMG/M
3300024177\|Ga0247686_1001455	All Organisms → cellular organisms → Bacteria → Proteobacteria	2746	Open in IMG/M
3300024177\|Ga0247686_1026647	All Organisms → cellular organisms → Bacteria → Proteobacteria	669	Open in IMG/M
3300024317\|Ga0247660_1068160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	598	Open in IMG/M
3300024317\|Ga0247660_1071579	All Organisms → cellular organisms → Bacteria → Proteobacteria	585	Open in IMG/M
3300025535\|Ga0207423_1002062	All Organisms → cellular organisms → Bacteria → Proteobacteria	2861	Open in IMG/M
3300025918\|Ga0207662_11007275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	591	Open in IMG/M
3300025927\|Ga0207687_11461199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	587	Open in IMG/M
3300025931\|Ga0207644_11515106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	563	Open in IMG/M
3300025949\|Ga0207667_10565233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1149	Open in IMG/M
3300025960\|Ga0207651_11175535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	688	Open in IMG/M
3300026023\|Ga0207677_10518681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1033	Open in IMG/M
3300026078\|Ga0207702_10532404	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300026088\|Ga0207641_11032678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	819	Open in IMG/M
3300026088\|Ga0207641_12580301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	506	Open in IMG/M
3300026116\|Ga0207674_11205728	All Organisms → cellular organisms → Bacteria → Proteobacteria	726	Open in IMG/M
3300026118\|Ga0207675_102238922	Not Available	561	Open in IMG/M
3300027821\|Ga0209811_10036936	Not Available	1639	Open in IMG/M
3300027873\|Ga0209814_10148540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1005	Open in IMG/M
3300027880\|Ga0209481_10003075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6942	Open in IMG/M
3300028065\|Ga0247685_1004644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1785	Open in IMG/M
3300028293\|Ga0247662_1077051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	595	Open in IMG/M
3300028792\|Ga0307504_10008991	Not Available	2201	Open in IMG/M
3300028812\|Ga0247825_10038095	All Organisms → cellular organisms → Bacteria → Proteobacteria	3186	Open in IMG/M
3300028812\|Ga0247825_10108881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1879	Open in IMG/M
3300031184\|Ga0307499_10009457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1953	Open in IMG/M
3300031547\|Ga0310887_10554480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	699	Open in IMG/M
3300031562\|Ga0310886_10476668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	749	Open in IMG/M
3300031720\|Ga0307469_10049398	All Organisms → cellular organisms → Bacteria → Proteobacteria	2630	Open in IMG/M
3300031740\|Ga0307468_100029519	All Organisms → cellular organisms → Bacteria → Proteobacteria	2588	Open in IMG/M
3300031740\|Ga0307468_101036820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	725	Open in IMG/M
3300031740\|Ga0307468_101171460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	690	Open in IMG/M
3300031740\|Ga0307468_101179761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	688	Open in IMG/M
3300031820\|Ga0307473_10380384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	918	Open in IMG/M
3300031820\|Ga0307473_10612546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	753	Open in IMG/M
3300031847\|Ga0310907_10590681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	604	Open in IMG/M
3300031854\|Ga0310904_10680614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	710	Open in IMG/M
3300031908\|Ga0310900_11100850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	657	Open in IMG/M
3300031908\|Ga0310900_11449091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	578	Open in IMG/M
3300031943\|Ga0310885_10262027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	880	Open in IMG/M
3300032003\|Ga0310897_10125447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1051	Open in IMG/M
3300032174\|Ga0307470_10074464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter rugosus	1847	Open in IMG/M
3300032205\|Ga0307472_101437395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	670	Open in IMG/M
3300032205\|Ga0307472_101452344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	667	Open in IMG/M
3300032205\|Ga0307472_101604439	All Organisms → cellular organisms → Bacteria → Proteobacteria	639	Open in IMG/M
3300032211\|Ga0310896_10335898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	791	Open in IMG/M
3300033550\|Ga0247829_10318490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1266	Open in IMG/M
3300033550\|Ga0247829_11457407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	565	Open in IMG/M
3300034148\|Ga0364927_0027484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1392	Open in IMG/M
3300034149\|Ga0364929_0113937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	859	Open in IMG/M
3300034149\|Ga0364929_0252039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	594	Open in IMG/M
3300034818\|Ga0373950_0012950	Not Available	1385	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.08%
Host-Associated	Host-Associated	26.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.62%
Plants	Host-Associated → Plants	26.92%
Aquatic	Environmental → Aquatic	8.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.54%
Sediment	Environmental → Aquatic → Sediment	5.38%
Marine	Environmental → Aquatic → Marine	2.31%
Floodplain	Environmental → Terrestrial → Floodplain	2.31%
Freshwater	Environmental → Aquatic → Freshwater	0.77%
Roots	Host-Associated → Plants → Roots	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.46%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.08%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.31%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.31%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.77%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.08%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.08%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.31%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.31%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.77%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.92%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.08%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.08%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.31%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.31%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.54%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.54%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.54%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.77%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.77%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300004022	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012143	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT790_2	Environmental	Open in IMG/M
3300012167	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT333_2	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014868	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT830_16_10D	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300024177	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK27	Environmental	Open in IMG/M
3300024317	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01	Environmental	Open in IMG/M
3300025535	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028065	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26	Environmental	Open in IMG/M
3300028293	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK03	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_00732030	2088090014	Soil	MEYAIGADPEFLRVLVSGRDTDVPPSALCAQVFAESERLKRPRILIELDQKFPLSLASQQRLIDELPRLGFTPEHSIALVHRTPVAQMANQSIDMLAERRSLMVRNFRDVEQAKDWLRSR
GPICI_00688500	2088090015	Soil	MEYSFAVDAEFLRVKVSGRDTDRPPSEVCAAVLRESASSGRARILIELDQKFPLSPSSQYQLIENLPKLGFTPRHSIALVHRTPVAQMANQFIDLIAANRDLMVRNFPDVDVAKGWLRTRPG
INPhiseqgaiiFebDRAFT_1013255252	3300000364	Soil	EYAIGADPEFLRVLVSGRDTDVPPSALCAQVFAESERLKRPRILIELDQKFPLSLASQQRLIDELPRLGFTPEHSIALVHRTPVAQMANQSIDMLAERRSLMVRNFRDVEQAKDWLRSR*
JGI10215J12807_10215892	3300000881	Soil	MEYSIGADEEFLRVTCSGRDTDTPPSAVCAAVLGQSKRLGRMLILIELDQKFPLSPGSQQQLIEHLPTIGFTAEHSIALVHRTPVAQMANKFIDEIAAKRGLMVRNFADVEDAKAWLRTR
JGI10214J12806_108855081	3300000891	Soil	MEYEIGADPEFLRVAVSGRDTDVPPSALCAAVLAESERLDRSRILIELDQKFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPIAQMANQYIDMLAERRMLMVRNFRDVEQAKDWLRTR
Ga0055432_100380191	3300004022	Natural And Restored Wetlands	SGRDTDTPPSALCAAVLGESMKLGRMRILIELDQKFPLSLDSQVDLIENLPKIGFTARHSIALVHRTPVGQMANRFIDVIAAERDLEVRNFPDAESAMAWLRTR*
Ga0062593_1015424851	3300004114	Soil	MQYTIGADPEFLRVTVSGRDTDVAPSALCAQVLAESDRLERPRILIELDQKFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPVAHMANQYIDMLAERRSLMVRNFRDAEEAKDWLRTR
Ga0062589_1026186581	3300004156	Soil	MEYEIGADPEFLRVAVSGRDTDVPPSALCAQVLAESDRLERPRILIELDQKFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPVAHMANQYIDMLAERRSLMVRNFRDAEEAKDWLRTR
Ga0062589_1028500441	3300004156	Soil	RAAQEAGGVGMEYEIGADPEFLRVAVSGRDTDVPPSALCAAVLAESERLDRSRILIELDQKFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPIAQMANQYIDMLAERRMLMVRNFRDVEQAKDWLRTR*
Ga0062590_1012542172	3300004157	Soil	VQYTIGADEEFLRVSVSGRDTDIPPSAVCAQVLIESERLERPRILIELDQKFPLSLASQQQLIDQLPMIGFTPEYSIALVHRTPVAQMANQYIDMLAERRDLAVRNFRDVEQAKEWLRSR
Ga0066397_100426232	3300004281	Tropical Forest Soil	MEYTIGADAEFLRVTVSGRDTDTPPSALCAAILGESLKLGRMRILIELDQVFPLSLDSQVELIENLPKIGFTAQHSIALVHRTPVAQMANRFIDVIAAERDLEVRNFPDVESARGWLRTR
Ga0063356_1003939522	3300004463	Arabidopsis Thaliana Rhizosphere	MEYSFAVDAEFLRVKVSGRDTDRPPSEVCAAVLRESASSGRARILIELDQKFPLSPSSQYQLIENLPKLGFTPRHSIALVHRTPVAQMANQFIDLIAANRDLMVRNFPDVDVAKGWLRTRPG*
Ga0063356_1014609612	3300004463	Arabidopsis Thaliana Rhizosphere	MEYSIGADEEFLRVTCSGRDTDTPPSAVCAAVLGQSKRLGRMLILIELDQKFPLSPGSQQQLIEHLPTIGFTAEHSIALVHRTPVAQMANKFIDEIAAKRGLMVRNFADVEHAKAWLRTR
Ga0062595_1025633691	3300004479	Soil	DARQGRAAQEAGGVGVQYTIGADEEFLRVSVSGRDTDIPPSAVCAQVLIESERLERPRILIELDQKFPLSLASQQQLIDQLPMIGFTPEYSIALVHRTPVAQMANQYIDMLAERRDLAVRNFRDVEQAKEWLRSR*
Ga0066814_100794562	3300005162	Soil	VSGRDTDVAPSALCAQVLAESERLERPRILIELDQKFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPVAQMANQYIDMLAERRSLMVRNFRDAEEAKDWLRTRA*
Ga0066809_101254742	3300005168	Soil	EYEIGADPEFLRVTVSGRDTDVAPSALCAQVLAESERLERPRILIELDQKFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPVAQMANQYIDMLAERRMLMVRNFRDAEEAKDWLRTR*
Ga0066810_100850291	3300005169	Soil	VQYTIGADEEFLRVSVSGRDTDIPPSAVCAQVLIESERLERSRILIELDQKFPLSLRSQEQLIDQLPMIGFTPEHSIALVHRTPVAQMANQYIDMLAERRMLMVRNFRDAEEAKDWLRTR
Ga0068993_100427792	3300005183	Natural And Restored Wetlands	VEYTIGADAEFLRVTVSGRDTDTPPSALCAAVLGESMKLGRMRILIELDQKFPLSLDSQVDLIENLPKIGFTARHSIALVHRTPVGQMANRFIDVIAAERDLEVRNFPDAESAMAWLRTR
Ga0065704_104614872	3300005289	Switchgrass Rhizosphere	VEGRDTDVPPSALCAQVLAESERLERPRILIELNQKFPLSLASQQQLIDALPKIGFTSEHSIALVHKTPVAQMANQYIDMLAERRALAVRNFRDVEQAKEWLRSR*
Ga0065705_101358352	3300005294	Switchgrass Rhizosphere	MEYAIGADPEFLRVLVEGRDTDVPPSALCAQVLAESERLERPRILIELNQKFPLSLASQQQLIDALPKIGFTSEHSIALVHKTPVAQMANQYIDMLAERRALAVRNFRDVEQAKEWLRSR
Ga0065705_111246211	3300005294	Switchgrass Rhizosphere	RAAQEAGGLGMEYAIGADQEFLRVLVSGRDTDVPPSALCAQVFAESERLQRPRILIELDQKFPLSLASQQRLIDELPRIGFTPGHSIALVHRTPVAQMANQYIDMLAERRSLMVRNFRDAEEAKDWLRTR*
Ga0066388_1023766181	3300005332	Tropical Forest Soil	VEYVIGADEEFLRVTVSGRDTDTPPSALCAAVLSQSNRLQRTRILIELDQKFPLSPGSQAELVENLHRLGFTPEHSIAMVHRTPIAQMAYRLIDVLAAEQDLAVRSFPDVESAQAWLRRR
Ga0066388_1036384101	3300005332	Tropical Forest Soil	VEYAIGADPEFLRVLVQGRDTDVPPSALCAQVFAESERLERPRILIELDQKFPLSLASQQQLIEALPKIGFTAEHSIALVHRTPVAQMANQYIDMLAERRALAVRNFRDVEQAKEWLRSR
Ga0066388_1077999862	3300005332	Tropical Forest Soil	MEYTIGADPEFLRVSFSGRDTDVPPSAVCAQVLVESERLERPRILIELDQKFPLSLRSQQQLIDQLPLVGFTPDHSIALVHRTPVAQMANQYIDMLAARRSLAVRNFRDVEQAKNWLRTR
Ga0070680_1019377951	3300005336	Corn Rhizosphere	MEYTIGADPEFLRVSVSGRDTDVAPSALCAQVLVESERLERPRILIELDQKFPLSLASQQRLIDELPRIGFTAEHSIALVHRTPVAQMANQYIDMLSERRDLAVRNFRDVEQAKEWL
Ga0070687_1004763742	3300005343	Switchgrass Rhizosphere	VQYTIGADEEFLRVSVSGRDTDIPPSAVCAQVLIESERLERPRILIELDQKFPLSLASQQQLIDQLPMIGFTPEYSIALVHRTPVAQMANQYIDMLAERRDLAVRNFRDVEQAKEWL
Ga0070673_1013547291	3300005364	Switchgrass Rhizosphere	DEEFLRVSVSGRDTDIPPSAVCAQVLIESERLERPRILIELDQKFPLSLASQQQLIDQLPMIGFTPEYSIALVHRTPVAQMANQYIDMLAERRDLAVRNFRDVEQAKEWLRSR*
Ga0070688_1006461062	3300005365	Switchgrass Rhizosphere	RDTDVPPSAICAQVFAESERLERPRILIELDQKIPLSLASQQQLIEALPKIGFSAEHSIALVHRTPIAQMANQHIDMLAARRKLAVRNFRDVEQAKEWLRTR*
Ga0070708_1013089081	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VQYTIGADEEFLRVSVSGRDTDIPPSAVCAQVLIESERLERPRILIELDQKFPLSLASQQQLIDQLPMIGFTPEYSIALVHRTPVAQMANQYIDMLAERRDLA
Ga0068855_1005636751	3300005563	Corn Rhizosphere	RLRPDARQGRAAQEAGGLGMEYAIGADAEFLRVLMQGRDTDVPPSAICAQVFAESERLERPRILIELDQKIPLSLASQQQLIEALPKIGFSAEHSIALVHRTPIAQMANQHIDMLAARRKLAVRNFRDVEQAKEWLRTR*
Ga0068857_1013840182	3300005577	Corn Rhizosphere	VLVQGRDTDVPPSALCAQVFAESERLERPRILIELDQKIPLSLASQQQLIEALPKIGFSAEHSIALVHRTPIAQMANQHIDMLAARRKLAVRNFRDVEQAKEWLRTR*
Ga0068864_1021765541	3300005618	Switchgrass Rhizosphere	RADARQGRAAQEAGGLGMEYAIGADAEFLRVLMQGRDTDVPPSAICAQVFAESERLERPRILIELDQKIPLSLASQQQLIEALPKIGFSAEHSIALVHRTPIAQMANQHIDMLAARRKLAVRNFRDVEQAKEWLRTR*
Ga0066905_1005454742	3300005713	Tropical Forest Soil	VEYVIGADEEFLRVTVSGRDTDTPPSALCAAILSQSNRLQRTRILIELDQKFPLSPASQGELIENLHRLGFTPQHSIAMVHRTPVAQMAYRLIEVLAAEQDLAVRNFPDVESAQAWLRRR
Ga0068870_102096422	3300005840	Miscanthus Rhizosphere	DARQGRAAQEAGGLGMEYAIGADAEFLRVLMQGRDTDVPPSAICAQVFAESERLERPRILIELDQKIPLSLASQQQLIEALPKIGFSAEHSIALVHRTPIAQMANQHIDMLAARRKLAVRNFRDVEQAKEWLRTR*
Ga0097621_1007351981	3300006237	Miscanthus Rhizosphere	MEYTIGADPEFLRVSVSGRDTDVAPSALCAQVLVESERLERPRILIELDQKFPLSLASQQRLIDELPRIGFTAEHSIALVHRTPVAQMANQYIDMLSERRDLA
Ga0074053_119071232	3300006575	Soil	MQYTIGADPEFLRVEVSGRDTDIAPSALCAQVLAESDRLERRRILIELDQKFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPVAQMANQYINMLAERRSLMVRNFRDAEEAKDWLRTR
Ga0074059_119514491	3300006578	Soil	GMQYTIGADPEFLRVAVSGRDTDVPPSALCAAVLAESERLERPRILIELDQRFPLSLASQQRLVDELPRIGFTPGHSIALVHRTPVAQMANQYIDMLAERRMLMVRNFRDVEQAKDWLRTR*
Ga0074048_126260802	3300006581	Soil	MQYTIGADPEFLRVAVSGRDTDIAPSALCAQVLAESDRLRRRRILIELDQKFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPVAQMANQYIDMLAERRMLMVRNFRDAEEAKDWLRTR
Ga0074057_100386511	3300006605	Soil	MQYAIGADPEFLRVAVSGRDTDIAPSALCAQVLAESDRLRRRRILIELDQKFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPVAQMANQYIDMLAERRSLMVRNFRDAEEAKDWLRTR
Ga0074062_130234803	3300006606	Soil	GMQYTIGADPEFLRVAVSGRDTDIAPSALCAQVLAESDRLERRRILIELDQKFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPVAQMANQYIDMLAERRSLMVRNFRDAEEAKDWLRTR*
Ga0075434_1013458052	3300006871	Populus Rhizosphere	VEYAIGADPEFLRVLVTGRDTDVAPSALCAQVFAESERLERPLILIELDQKFPLSLKSQQELIDALPKIGFAPEHSIALVHKTPVAQMANQYIDMLAERRALAVRNFRDVEQAKEWLRSR
Ga0099791_100702363	3300007255	Vadose Zone Soil	MEYAIGADQEFLRVMVSGRDTDVPPSALCGQVFAESERLERPRILIELDQKFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPVAQMANQYIDMLAERRVLMVRNFRDVEQAKDWLRTR
Ga0111539_132319042	3300009094	Populus Rhizosphere	MEYAIGADPEFLRVLVEGRDTDVPPSALCAQVLAESERLERPRILIELNQKFPLSLASQQQLIDALPKIGFTSDHSIALVHKTPVAQMANQYIDMLAERRALAVRNFRDVEQAKEWLRSR
Ga0105245_129369742	3300009098	Miscanthus Rhizosphere	MEYTIGADPEFLRVSVSGRDTDVAPSALCAQVLVESERLERPRILIELDQKFPLSLASQQRLIDELPRIGFTAEHSIALVHRTPVAQMANQYIDMLSERRDLAVRNFRDVEQAKEWLRSR
Ga0105243_118068731	3300009148	Miscanthus Rhizosphere	MEYAIGADAEFLRVLMQGRDTDVPPSALCAQVFAESERLERPRILIELDQKIPLSLASQQQLIEALPKIGFSAEHSIALVHRTPIAQMANQHIDMLAAR
Ga0075423_104870532	3300009162	Populus Rhizosphere	MQYTIGADEEFLRVSVSGRDTDIPPSAVCAQVLIESERRERPRILIELDQKFPLSLASQQQLIDQLPMIGFTPEYSIALVHRTPVAQTANQYIDMLAERRDLAVRNFRAVEEAKDWLRTR
Ga0075423_116534051	3300009162	Populus Rhizosphere	GRDTDVAPSALCAQVFAESERLERPLILIELDQKFPLSLKSQQELIDALPKIGFAPEHSIALVHKTPVAQMANQYIDMLAERRALAVRNFRDVEQAKKWLRSR*
Ga0126384_101908282	3300010046	Tropical Forest Soil	MEYTIGADPEFLRVSVSGRDTDVPPSAVCAQVFVESERLERPRILIELDQKFPLSLRSQQQLIDQLPLVGFTPDHSIALVHRTQVAQMANQYIDMLAARRNLAVRNFRDVDQAKDWLRTR
Ga0126382_104802412	3300010047	Tropical Forest Soil	VEYVIGADEEFLRVTVSGRDTDTPPSALCAAVLSQSNRLQRTRILIELDQKFPLSPGSQAELVENLHRLGFTPEHRIAMVHRTPIAQMAYRLIDVLAAEQDLAVRNFPDLESAQAWLRTR
Ga0126382_114531661	3300010047	Tropical Forest Soil	ARQGRAAQEAGSLVDYAIGADEEFLRVLVTGRDTDVPPSALCAQVFTESERLQRPRILIELDQKFPLSLRSQQELIGQLPKIGFTPQHSIALVHSTPAAQLANQYIDAIAASRALAVRNFPDVEKAKEWLRSR*
Ga0134122_124681522	3300010400	Terrestrial Soil	MEYAIGADPEFLRVLMRGRDTDVPPSALCAQVFAESERLERPRILIELDQKFPLSLRSQQQLMEELPRIGFTAQHRIALVHRTPVAQMANQYIDMLAERRMLMVRNFRH
Ga0151489_12374291	3300011106	Soil	MQYTIGADPEFLRVAVSGRDTDVPPSALCAAVLAESERLERPRILIELDQKFPLSLASQQRLIDELPRIGFTPEHSIAPVHRTPVAQMANQYIDMLAERRSLMVRNFRDAEEAKDWLRTR
Ga0151490_17494772	3300011107	Soil	VQYTIGADEEFLRVSVSGRDTDIPPSAVCAQVLAESDRLERRRILIELDQKFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPVAQMANQYIDMLAERRMLMVRNFRDLEEARDWLRTR
Ga0137429_11488531	3300011437	Soil	MEYTIGADAEFLLVTASGRETDTPPSALCAAVLGESAKLGRMRILIELDQKFPLSPASQAQLIENLPKIGFTPLHSIALVHRTPVAQMANQFIDVLAGERGL
Ga0137432_10171823	3300011439	Soil	MEYTIGADAEFLLVTASGRDTDTPPSALCAAVLGESMKLGRMRILIELDQKFPLSLDSQVQLIENLPKLGFTAQHSIALVHRTPVGQMANRFIDVIAAERDLEVRNFPDVESARAWLRTR
Ga0137427_100098082	3300011445	Soil	MEYTIGADAEFLLVTASGRDTDTPPSALCAAVLGESAKLGRMRILIELDQKFPLSPASQAQLIENLPKIGFTPLHSIALVHRTPVAQMANQFIDVLAGERGLMVRNFPDPESARAWLRTR
Ga0137354_10831871	3300012143	Soil	MEYTIGADAEFLLVAVSGRDTDTPPSALCAAVLGESAKLGRMRILIELDQKFPLSPASQAQLIENLPKIGFTPLHSIALVHRTPVAQMANQFIDVLAGERGLM
Ga0137319_10519142	3300012167	Soil	WDTDTPPSALCAAVLGESMKLGRMRILIELDQKFPLSLDSQVQLIENLPKLGFTAQHSIALVHRTPVGQMANRFIDVIAAERDLEVRNFPDVESARAWLRTR*
Ga0157352_10436511	3300012519	Unplanted Soil	DQEFLRVLVSGRDTDVPPSALCAQVFAESERLQRPRILIELDQKFPLSLASQQRLVDELPRIGFTHGHSIALVHRTPVPQMANQYIDMLAERRSLMVRNFRDAEEAKDWLRTR*
Ga0157298_104491241	3300012913	Soil	MQYTIGADPEFLRVTVSGRDTDVAPSALCAQVLAESDRLERPRILIELDQKFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPVAHMANQYIDMLAERRSLMVRNFRDAEEAKDW
Ga0137394_101009234	3300012922	Vadose Zone Soil	DQEFLRVLVTGRDTDVPPSALCAQVFAESERLERPRILIELDQKFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPVAQMANQHIDMLAERRVLMVRNFRDVEQAKDWLRTR*
Ga0126375_106732322	3300012948	Tropical Forest Soil	VEYVIGADEEFLRVTVSGRDTDTPPSALCAAVLSQSNRLQRARILIELDQKFPLSPGSQAELVENLHRLGFTPQHSIAMVHRTPVAQMAYRLIEVLAAEQDLAVRNFPDVESAQAWLRRR
Ga0164303_100783082	3300012957	Soil	VQYTIGADEEFLRVSVSGRDTDIPPSAVCAQVLIESARLERPRILIELDQKFPLSLASQQQLIDQLPMIGFTPEYSIALVHRTPVAQMANQYIDMLAERRDLAVRNFRDVEQAKEWLRSR
Ga0164301_102566502	3300012960	Soil	VQYTIGADEEFLRVSVSGRDTDIPPSAVCAQVLIESERLERPRILIELDQKFPLSLASQQQLIDQLPMIGFTPEYSIALVHRTPVAQMANQYIDMLAERRMLMVRNFRDLEEAKDWLRTR
Ga0164302_102666091	3300012961	Soil	RLRADARQGRAAQEAGGVGVQYTIGADEEFLRVSVSGRDTDIPPSAVCAQVLIESERLERPRILIELDQKFPLSLASQQQLIDQLPMIGFTPEYSIALVHRTPVAQMANQYIDMLAERRDLAVRNFRDVEQAKEWLRSR*
Ga0164305_115575761	3300012989	Soil	RDTDIPPSAVCAQVLIESERLERPRILIELDQKFPLSLASQQQLIDQLPMIGFTPEYSIALVHRTPVAQMANQYIDMLAERRDLAVRNFRDVEQAKEWLRSR*
Ga0157377_100894933	3300014745	Miscanthus Rhizosphere	VQYTIGADEEFLRVSVSGRDTDIPPSAVCAQVLIESERLERPRILIELDQKFPLSLASQQQLIDQLTMIGFTPEYSIALVHRTPVAQMANQYIDMLAERRDLAVRNFRDVEQAKEWLRSR
Ga0180088_10383252	3300014868	Soil	MEYTIGADAEFLLVTASGRETDTPPSALCAAVLGESAKLGRMRILIELDQKFPLSPASQAQLIENLPKIGFTPLHSIALVHRTPVAQMANQFIDVLAGERGLMVRNFPDPESARAWLPTR
Ga0157379_124323701	3300014968	Switchgrass Rhizosphere	EFLRVSVSGRDSDIPPSAVCAQVLIESERLERPRILIELDQKFPLSLASQQQLIDQLPMIGFTPEYSIALVHRTPVAQMANQYIDMLSERRDLAVRNFRDVEQAKEWLRSR*
Ga0132258_122444232	3300015371	Arabidopsis Rhizosphere	MMEYAIGADREFLRVLVHGRDTDVPPSALCAQVFSESERLERPRILIELDQKFPLSLASQQRLIEALPKIGFTAEHSIALVHRTPVAQMANQYIDIFAEANELEVRNFRDVGEAEEWLRSR*
Ga0132258_138329072	3300015371	Arabidopsis Rhizosphere	EFLRVLVSGRDTDVPPSALCAQVFAESERLQRPRILIELDQKFPLSLASQQRLIDELPRIGFTPGHSIALVHRTPVAQMANQYIDMLAERRSLMVRNFRDAEEAKDWLRTR*
Ga0132257_1009255522	3300015373	Arabidopsis Rhizosphere	MEYAIGADQEFLRVLVSGRDTDVPPSALCAQVFAESERLQRTRILIELDQKFPLSLASQQRLIDELPRIGFTPGHSIALVHRTPVAQMANQYIDMLAERRSLMVRNFRDAEEAKDWLRTR
Ga0132257_1014300461	3300015373	Arabidopsis Rhizosphere	MEYAIGADPEFLRVLVEGRDTDVAPSALCAQVFAESERLERPRILIELDQKFPLSLRSQQQLMEELPRIGFTAQHSIALVHRTPVAQMANQYIDMFAAARE
Ga0132257_1031004701	3300015373	Arabidopsis Rhizosphere	LRVLVEGRDTDVPPSALCAQVLAESERLERPRILIELNQKFPLSLASQQLLIDALPKIGFTPEHSIALVHKTPVAQMANQYIDMLAERRALAVRNFRDVEQAKEWLRSR*
Ga0184628_100617832	3300018083	Groundwater Sediment	MQYTIGADPEFLRVAVSGRDTDIPPSALCAAVLAESGRLERPRILIELDQRFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPVAQMANQYIDMLAERRMLMVRNFRDVDAAKGWLRTR
Ga0190265_103206692	3300018422	Soil	MEYSIESDEEFLRVQVSGRDTDRPPSEVCAAVLSESARLGRLRILIELDQKFPLSPSSQHVLITNLPEIGFTPRHSIALVHRTPVAQMANQFIDVVAANRDLMVRNFPDIENAKAWLRTR
Ga0190265_115976922	3300018422	Soil	MEYTIAADAEFLRVRMSGRDTDAPPSDVCATVLGESARFGRMRILIELDQKFPLSLTSQYQLITKLPEIGFTPQHSIALVHLKPAAQKANEFIDVIAANRGLAVRNFPDVEDAKAWLRKRIA
Ga0210380_100874721	3300021082	Groundwater Sediment	VGMQYTIGADPEFLRVAVSGRDTDIPPSALCAAVLAESGRLERPRILIELDQRFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPVAQMANQYIDMLAERRMLMVRNFRDVDAAKGWLRTR
Ga0247686_10014551	3300024177	Soil	VQYTIGADEEFLRVSVSGRDTDIPPSAVCAQVLIESERLERPRILIELDQKFPLSLASQQQLIDQLPMIGFTPEYSIALVHRTPVAQMANQYIDMLAERRDLAVRNFR
Ga0247686_10266471	3300024177	Soil	TDVPPSAICAQVFAESERLERPRILIELDQKIPLSLASQQQLIEALPKIGFSAEHSIALVHRTPIAQMANQHIDMLAARRKLAVRNFRDVEQAKEWLRTR
Ga0247660_10681601	3300024317	Soil	VQYTIGADEEFLRVSVSGRDTDIPPSAVCAQVLIESERLERPRILIELDQKFPLSLASQQQLIDQLPMIGFTPEYSIALVHRTPVAQMANQYIDMLAERRDLAVRNFRDVEQAKE
Ga0247660_10715791	3300024317	Soil	PSAICAQVFAESERLERPRILIELDQKIPLSLASQQQLIEALPKIGFSAEHSIALVHRTPIAQMANQHIDMLAARRKLAVRNFRDVEQAKEWLRTR
Ga0207423_10020624	3300025535	Natural And Restored Wetlands	SGRDTDTPPSALCAAVLGESMKLGRMRILIELDQKFPLSLDSQVDLIENLPKIGFTARHSIALVHRTPVGQMANRFIDVIAAERDLEVRNFPDAESAMAWLRTR
Ga0207662_110072751	3300025918	Switchgrass Rhizosphere	DTDVAPSALCAQVLVESERLERPRILIELDQKFPLSLASQQRLIDELPRIGFTAEHSIALVHRTPVAQMANQYIDMLSERRDLAVRNFRDVEQAKEWLRTR
Ga0207687_114611992	3300025927	Miscanthus Rhizosphere	GRAAQEAGGVGMEYTIGADPEFLRVSVSGRDTDVAPSALCAQVLVESERLERPRILIELDQKFPLSLASQQRLIDELPRIGFTAEHSIALVHRTPVAQMANQYIDMLSERRDLAVRNFRDVEQAKEWLRTR
Ga0207644_115151061	3300025931	Switchgrass Rhizosphere	EFLRVSVSGRDTDIPPSAVCAQVLIESERLERPRILIELDQKFPLSLASQQQLIDQLPMIGFTPEYSIALVHRTPVAQMANQYIDMLAERRDLAVRNFRDVEQAKEWLRSR
Ga0207667_105652331	3300025949	Corn Rhizosphere	RRLRPDARQGRAAQEAGGLGMEYAIGADAEFLRVLMQGRDTDVPPSAICAQVFAESERLERPRILIELDQKIPLSLASQQQLIEALPKIGFSAEHSIALVHRTPIAQMANQHIDMLAARRKLAVRNFRDVEQAKEWLRTR
Ga0207651_111755352	3300025960	Switchgrass Rhizosphere	QYTIGADEEFLRVSVSGRDTDIPPSAVCAQVLIESERLERPRILIELDQKFPLSLASQQQLIDQLPMIGFTPEYSIALVHRTPVAQMANQYIDMLAERRDLAVRNFRDVEQAKEWLRSR
Ga0207677_105186812	3300026023	Miscanthus Rhizosphere	VQYTIGADEEFLRVSVSGRDTDIPPSAVCAQVLIESERLERPRILIELDQKFPLSLASQQQLIDQLPMIGFTPEYSIALVHRTPVAQMANQYIDMLSERRDLAVRNFRDVEQAKEWLRSR
Ga0207702_105324041	3300026078	Corn Rhizosphere	MAITPDGRFAYVTDNSDNTVHQYAIGADAEFLRVLMQGRDTDVPPSAICAQVFAESERLERPRILIELDQKIPLSLASQQQLIEALPKIGFSAEHSIALVHRTPIAQMANQHIDMLAARRKLAVRNFRDVEQ
Ga0207641_110326782	3300026088	Switchgrass Rhizosphere	MEYAIGADPEFLRVLVEGRDTDVPPSALCAQVLAESERLERPRILIELNQKFPLSLASQQLLIDALPKIGFTPEHSIALVHKTPVAQMANQYIDMLAERRALAVRNFRDVEQAKEWLRSR
Ga0207641_125803012	3300026088	Switchgrass Rhizosphere	ADEEFLRVSVSGRDTDIPPSAVCAQVLIESERLERPRILIELDQKFPLSLASQQQLIDQLPMIGFTPEYSIALVHRTPVAQMANQYIDMLAERRDLAVRNFRDVEQAKEWLRSR
Ga0207674_112057282	3300026116	Corn Rhizosphere	EFLRVLVQGRDTDVPPSALCAQVFAESERLERPRILIELDQKIPLSLASQQQLIEALPKIGFSAEHSIALVHRTPIAQMANQHIDMLAARRKLAVRNFRDVEQAKEWLRTR
Ga0207675_1022389222	3300026118	Switchgrass Rhizosphere	MEYAIGADAEFLRVLMQGRDTDVPPSAICAQVFAESERLERPRILIELDQNIPLSLASQQQLIEALPKIGFSAEHSIALVHRTPIARMANQHIDMLAARRKLAVRNF
Ga0209811_100369362	3300027821	Surface Soil	MEYTIGADPEFLRVAVSGRDTDIPPSALCAQVLAESERLERPRILIELDQKFPLSLASQQRLIEELPRIGFTPEHSIALVHRTPVAQMANQYIDMLAERRMLMVRNFRDLEEAKDWLRTR
Ga0209814_101485402	3300027873	Populus Rhizosphere	VEYAIGADPEFLRVLVTGRDTDVAPSALCAQVFAESERLERPRILIELDQKFPLSLKSQQELIDALPKIGFAPEHSIALVHKTPVAQMANQYIDMLAERRALAVRNFRDVEQAKKWLRSR
Ga0209481_100030753	3300027880	Populus Rhizosphere	VEYAIGADPEFLRVLVTGRDTDVAPSALCAQVFAESERLERPLILIELDQKFPLSLKSQQELIDALPKIGFAPEHSIALVHKTPVAQMANQYIDMLAERRALAVRNFRDVEQAKKWLRSR
Ga0247685_10046441	3300028065	Soil	EEFLRVSVSGRDTDIPPSAVCAQVLIESERLERPRILIELDQKFPLSLASQQQLIDQLPMIGFTPEYSIALVHRTPVAQMANQYIDMLAERRDLAVRNFRDVEQAKEWLRSR
Ga0247662_10770512	3300028293	Soil	AGGLGMEYAIGADAEFLRVLMQGRDTDVPPSAICAQVFAESERLERPRILIELDQKIPLSLASQQQLIEALPKIGFSAEHSIALVHRTPIAQMANQHIDMLAARRKLAVRNFRDVEQAKEWLRTR
Ga0307504_100089912	3300028792	Soil	VEYAIGADQEFLRVLVSGRDTDVAPSALCAQVFAESERLQRPRILIELDQKFPLSLASQQRLMDELPRIGFTPEHSIALVHRTPVAQMANQYIDMLAERRSLMVRNFRDVEQAKDWLRTR
Ga0247825_100380953	3300028812	Soil	VEYTIGADAEFLRVTVSGRDTDTPPSALCAAVLGESMKLGRMRILIELDQKFPLSLDSQVDLIDNLPKIGFTARHSIALVHRTPVGQMANRFIDVIAAERDLEVRNFPDVESARAWLRTR
Ga0247825_101088812	3300028812	Soil	MEYSFALDAEFLRVKAWGRDTDRPPLEFCAAVFRESVAGGRLRILIELDQLIPLSPSSQYELIENLPKAGFTSRHSIALVHRTPVAQMAYEFVNVVASNRDIMVRNFEDVEGAKGWLRTRPA
Ga0307499_100094572	3300031184	Soil	MEYEIGADPEFLRVAVSGRDTDIPPSALCAQVLAESERLERPRILIELDQKFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPVAQMANQYIDMLSERRMLMVRNFRDVEQAKDWLRTR
Ga0310887_105544801	3300031547	Soil	MEYTIGADEEFLLVTASGRDTDTPPSALCAAVLGESMKLGRMRILIELDQKFPLSLDRQVELIENLPRIGFTARHSIALVHRTPVAQMANRFIDVIAAERDLEVRNFPDVESARAWLRTR
Ga0310886_104766682	3300031562	Soil	MEYTIGADEEFLLVTASGRDTDTPPSALCAAVLGESMKLGRMRILIELDQKFPLSLDRQVELIENLPRIGFTARHSIALVHRTPVAQMANRFIDVIADERDLVVRNFPDVESARAWLRTR
Ga0307469_100493983	3300031720	Hardwood Forest Soil	VQYTIGADEEFLRVSVSGRDTDIPPSAVCAQVLIESGRLERPRILIELDQKFPLSLASQQQLIDQLPLIGFTPEHSIALVHSTPVAQMANQYIDMLAERRDLAVRNFRDVEQAKEWLRSR
Ga0307468_1000295193	3300031740	Hardwood Forest Soil	MQYTIGADPEFLRVEVSGRDTDIPPSALCAQVLAESERLERPRILIELDQKFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPVAQMANQYIDMLAERRMLMVRNFRDVEQAKDWLRTR
Ga0307468_1010368202	3300031740	Hardwood Forest Soil	IGADPEFLRVLVSGRDTDVPPSALCAQVFAESERLKRPRILIELDQKFPLSLTSQQRLIDELPRLGFTPEHSIALVHRTPVAQMANQYIDVFAERRSLMVRNFRDVEQAKDWLRSR
Ga0307468_1011714601	3300031740	Hardwood Forest Soil	VEYTIGADAEFLLVTASGRDTDTPPSAFCAAVLSQSARLDRMRILIELDQKFPLSPGSQAQLLENLPRLGFTPQHSIAMVHRTPVAQMANRLVDVLAAERELTVRTCPDVESARAWLRTR
Ga0307468_1011797611	3300031740	Hardwood Forest Soil	VQYTIGADEEFLRVSVSGRDTDIPPSAVCAQVLIESGRLERPRILIELDQKFPLSLASQQQLIEQLPLIGFTPEHSIALVHSTPVAQMANQYIDMLAERRDLAVRN
Ga0307473_103803842	3300031820	Hardwood Forest Soil	VEYTIGADAEFLLVTASGRDTDTPPSAFCAAVLAQSMKLGRMRILIELDQKFPLSPGSQAELMDNLSRLGFTPEHSIAMVHRTPVAQMANRLIDMLAAERELVVRTFPDVESAGAWLRTR
Ga0307473_106125462	3300031820	Hardwood Forest Soil	VQYTIGADEEFLRVSVSGRDTDIPPSAVCAQVLIESGRLERPRILIELDQKFPLSLASQQQLIDQLPLIGFTPEHSIALVHSTPVAQMANQYIDMLAERRDLAVRNFRDAEQAKEWLRSR
Ga0310907_105906812	3300031847	Soil	VEYTIGADAEFLRVTVSGRETDTPPSALCAAVLGESMKLGRMRILIELDQKFPLSLDSQVDLIDNLPKIGFTAQHSIALVHRTPVGQMANRFIDVIAAERDLEVRNFPDVESARAWLRTR
Ga0310904_106806141	3300031854	Soil	TDIAPSALCAQVRAESDRLERPRILIELDQKFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPVAQMANQYIDMLAERRMLMVRNFRDLEEAKDWLRTR
Ga0310904_107892702	3300031854	Soil	VEYTIGADAEFLRVTVSGRDTDTPPSALCAAVLGESMKLGRMRILIELDQKFPLSPASQYQLVTRLPELGLMAQHRIALVHRKPEAQKANEFIDVVAGNRGIQMRNFPSVEEAKAWLRTQAA
Ga0310900_111008501	3300031908	Soil	RDTDIPPSALCAQVLAESERLERPRILIELDQKFPLSLASQQRLIEELPRIGFTPEHSIALVHRTPVAQMANQYIDMLAERRMLMVRNFRDLEEAKDWLRTR
Ga0310900_114490912	3300031908	Soil	MEYTIGADEEFLLVTASGRDTDTPPSAFCAAVLGESMKLRRMRILIELDQKFPLSLDSQVDLIDNLPKIGFTARHSIALVHRTPVGQMANRFIDVIAAERDLEVRNFPDVESARGWLRTR
Ga0310885_102620272	3300031943	Soil	VEYTIGADAEFLRVTVSGRDTDTPPSALCAAVLGESMKLGRMRILIELDQKFPLSLDSQVDLIDNLPKIGFTARHSIALVHRTPVAQMANQYIDMLAERRDLAVRNFRDVEQAKEWLRSR
Ga0310897_101254472	3300032003	Soil	MEYAIGADPEFLRVLVEGRDTDVPPSALCAQVLAESERLERPRILIELNQKFPLSLASQQQLIDALPKIGFTSEHSIALVHKTPVAQMANQYIDMLAERRAL
Ga0307470_100744642	3300032174	Hardwood Forest Soil	VEYTIGADAEFLRVTASGRDTDTPPSAFCAAVLSQSARLGRMRILIELDQKFPLSPGSQAELMDNLSRLGFTPEHSIAMVHRTPVAQMANRLIDMLAAERELVVRTFPDVESAGAWLRTR
Ga0307472_1014373952	3300032205	Hardwood Forest Soil	ARQGRAAQEAGSVGVQYTIGADEEFLRVSVSGRDTDIPPSAVCAQVLIESGRLERPRILIELDQKFPLSLASQQQLIDQLPLIGFTPEHSIALVHSTPVAQMANQYIDMLAERRDLAVRNFRDVEQAKEWLRSR
Ga0307472_1014523442	3300032205	Hardwood Forest Soil	MEYAIGADPEFLRVLVEGRDTDVPPSALCAQVLAESERLERPRILIELNQKFPLSLASQQRLIDELPRIGFTPEHSIAMVHRTPVAQMANQHIDVLAERRSLAVRNFRDVEEAKGWLRSR
Ga0307472_1016044392	3300032205	Hardwood Forest Soil	VQYTIGADEEFLRVSVSGRDTDIPPSAVCAQVLIESERLERPRILIELDQKFPLSLASQQQLIEQLPMIGFTPEHSIALVHRTPVAQMANQYIDMLAGRRDLAVRNFRDVEQAEDWLRSR
Ga0310896_103358981	3300032211	Soil	MEYAIGADPEFLRVLVEGRDTDVPPSALCAQVLAESERLERPRILIELNQKFPLSLASQQLLIDALPKIGFTPEHSIALVHRTPVAQMANQYIDMLAERRMLMVRNFRD
Ga0247829_103184901	3300033550	Soil	VEYTIGADAEFLRVTVSGRDTDTPPSALCAAVLGESMKLGRMRILIELDQKFPLSLDSQVDLIDNLPKIGFTAQHSIALVHRTPVGQMANRFIDVIAAERDLEVRNFPDVESARAWLRTR
Ga0247829_114574071	3300033550	Soil	MEYEIGADPEFLRVTVSGRDTDVAPSALCAQVLAESERLERPRILIELDQKFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPVAQMANQYIDMLAERRMLMVRNFRHAEEAKGWLRTR
Ga0364927_0027484_822_1184	3300034148	Sediment	MEYTIGADAEFLLVTASGRETDTPPSALCAAVLGESAKLGRMRILIELDQKFPLSPASQAQLIENLPKIGFTPLHSIALVHRTPVAQMANQFIDVLAGERGLMVRNFPDPESARAWLRTR
Ga0364929_0113937_521_859	3300034149	Sediment	MQYTIGADPEFLRVAVSGRDTDIPPSALCAAVLAESGRLERPRILIELDQRFPLSLASQQRLIDELPRIGFTPEHSIALVHRTPVAQMANQYIDMLAERRMLMVRNFRDVDAA
Ga0364929_0252039_61_423	3300034149	Sediment	VEYTIGADAEFLLVTASGRDTDTPPSALCAAVLGQSMKLGRMRILIELDQKFPLSLDSQVDLIENLPKIGFTPQHSIALVHRTPVGQMANRFIDVIAAERDLEVRNFPDVESARAWLRTR
Ga0373950_0012950_3_308	3300034818	Rhizosphere Soil	DTDVPPSALCAQVLAESERLERPRILIELNQKFPLSLASQQQLIDALPKIGFTSEHSIALVHKTPVAQMANQYIDMLAERRALAVRNFRDVEQAKEWLRSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062858

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences