Metagenome / Metatranscriptome Family F062968

Basic Information
Family ID	F062968
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	88 residues
Representative Sequence	MGSFKPPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF
Number of Associated Samples	119
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	50.39 %
% of genes near scaffold ends (potentially truncated)	54.62 %
% of genes from short scaffolds (< 2000 bps)	79.23 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (63.846 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.846 % of family members)
Environment Ontology (ENVO)	Unclassified (39.231 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.538 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.43% β-sheet: 2.13% Coil/Unstructured: 57.45%
Feature Viewer

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Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF13545	HTH_Crp_2	22.31
PF00027	cNMP_binding	10.77
PF00313	CSD	6.15
PF00487	FA_desaturase	2.31
PF07369	DUF1488	2.31
PF00072	Response_reg	1.54
PF12850	Metallophos_2	0.77
PF03358	FMN_red	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	2.31
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	2.31

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.85 %
All Organisms	root	All Organisms	36.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.85 %
cellular organisms	root	All Organisms → cellular organisms	36.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30.77 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14.62 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	1.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.85 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	5.38 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.31 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	1.54 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.85 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.38 %
Escherichia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	1.54 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.54 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.77 %
Variibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.85 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.38 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1.54 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.54 %
Variibacter gotjawalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	0.77 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001139\|JGI10220J13317_10280845	Not Available	513	Open in IMG/M
3300001989\|JGI24739J22299_10031777	All Organisms → cellular organisms → Bacteria → Proteobacteria	1822	Open in IMG/M
3300001989\|JGI24739J22299_10154594	Not Available	678	Open in IMG/M
3300001991\|JGI24743J22301_10137316	Not Available	542	Open in IMG/M
3300002239\|JGI24034J26672_10084793	Not Available	582	Open in IMG/M
3300004156\|Ga0062589_102773298	Not Available	511	Open in IMG/M
3300004798\|Ga0058859_11552286	Not Available	550	Open in IMG/M
3300004801\|Ga0058860_12135028	Not Available	731	Open in IMG/M
3300005327\|Ga0070658_10066889	All Organisms → cellular organisms → Bacteria	2936	Open in IMG/M
3300005327\|Ga0070658_10139408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2025	Open in IMG/M
3300005329\|Ga0070683_100156891	Not Available	2159	Open in IMG/M
3300005330\|Ga0070690_100016538	All Organisms → cellular organisms → Bacteria	4422	Open in IMG/M
3300005331\|Ga0070670_100009386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8352	Open in IMG/M
3300005340\|Ga0070689_100008864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7107	Open in IMG/M
3300005347\|Ga0070668_100023881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4629	Open in IMG/M
3300005353\|Ga0070669_100340780	Not Available	1215	Open in IMG/M
3300005354\|Ga0070675_100045314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3598	Open in IMG/M
3300005435\|Ga0070714_101616021	Not Available	633	Open in IMG/M
3300005436\|Ga0070713_101304251	Not Available	704	Open in IMG/M
3300005437\|Ga0070710_10016167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3791	Open in IMG/M
3300005440\|Ga0070705_100000866	All Organisms → cellular organisms → Bacteria → Proteobacteria	16940	Open in IMG/M
3300005535\|Ga0070684_100115683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2409	Open in IMG/M
3300005548\|Ga0070665_100302364	Not Available	1603	Open in IMG/M
3300005578\|Ga0068854_100375135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1171	Open in IMG/M
3300005614\|Ga0068856_100162940	Not Available	2241	Open in IMG/M
3300005617\|Ga0068859_101091500	Not Available	878	Open in IMG/M
3300005719\|Ga0068861_100085350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	2479	Open in IMG/M
3300005834\|Ga0068851_10110768	Not Available	1465	Open in IMG/M
3300005841\|Ga0068863_100657601	Not Available	1040	Open in IMG/M
3300006028\|Ga0070717_11279202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	667	Open in IMG/M
3300006175\|Ga0070712_100243775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1433	Open in IMG/M
3300006755\|Ga0079222_10086899	Not Available	1598	Open in IMG/M
3300006844\|Ga0075428_100508516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1289	Open in IMG/M
3300006854\|Ga0075425_100370878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1648	Open in IMG/M
3300009036\|Ga0105244_10479333	Not Available	572	Open in IMG/M
3300009093\|Ga0105240_10852511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	983	Open in IMG/M
3300009094\|Ga0111539_10115891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3141	Open in IMG/M
3300009156\|Ga0111538_10337826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1907	Open in IMG/M
3300009162\|Ga0075423_10442826	Not Available	1365	Open in IMG/M
3300009174\|Ga0105241_10041415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3480	Open in IMG/M
3300009176\|Ga0105242_10073615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2841	Open in IMG/M
3300009545\|Ga0105237_10021120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6698	Open in IMG/M
3300009553\|Ga0105249_10069674	All Organisms → cellular organisms → Bacteria	3246	Open in IMG/M
3300010371\|Ga0134125_10036280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5498	Open in IMG/M
3300010375\|Ga0105239_12261790	Not Available	632	Open in IMG/M
3300010401\|Ga0134121_10422380	Not Available	1210	Open in IMG/M
3300012882\|Ga0157304_1038410	Not Available	692	Open in IMG/M
3300012884\|Ga0157300_1007699	Not Available	1222	Open in IMG/M
3300012892\|Ga0157294_10086056	Not Available	783	Open in IMG/M
3300012893\|Ga0157284_10223285	Not Available	580	Open in IMG/M
3300012895\|Ga0157309_10266773	Not Available	565	Open in IMG/M
3300012897\|Ga0157285_10027148	Not Available	1263	Open in IMG/M
3300012897\|Ga0157285_10059651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	955	Open in IMG/M
3300012899\|Ga0157299_10324793	Not Available	519	Open in IMG/M
3300012900\|Ga0157292_10431993	Not Available	506	Open in IMG/M
3300012902\|Ga0157291_10048975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	992	Open in IMG/M
3300012905\|Ga0157296_10269484	Not Available	581	Open in IMG/M
3300012907\|Ga0157283_10091164	Not Available	798	Open in IMG/M
3300012911\|Ga0157301_10012425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1730	Open in IMG/M
3300012911\|Ga0157301_10012980	Not Available	1704	Open in IMG/M
3300012912\|Ga0157306_10076726	Not Available	913	Open in IMG/M
3300012914\|Ga0157297_10080848	Not Available	932	Open in IMG/M
3300012915\|Ga0157302_10020867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1650	Open in IMG/M
3300012915\|Ga0157302_10371967	Not Available	580	Open in IMG/M
3300012960\|Ga0164301_10599734	Not Available	813	Open in IMG/M
3300012961\|Ga0164302_10125267	Not Available	1469	Open in IMG/M
3300012986\|Ga0164304_11504308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	557	Open in IMG/M
3300013096\|Ga0157307_1169428	Not Available	521	Open in IMG/M
3300013296\|Ga0157374_11675762	Not Available	660	Open in IMG/M
3300013297\|Ga0157378_10122516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	2399	Open in IMG/M
3300013306\|Ga0163162_10807811	Not Available	1055	Open in IMG/M
3300013307\|Ga0157372_10144951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	2739	Open in IMG/M
3300014325\|Ga0163163_10013176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7556	Open in IMG/M
3300014326\|Ga0157380_10041689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3584	Open in IMG/M
3300014745\|Ga0157377_10122122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1580	Open in IMG/M
3300015200\|Ga0173480_10851072	Not Available	587	Open in IMG/M
3300015201\|Ga0173478_10077882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1165	Open in IMG/M
3300015372\|Ga0132256_101390923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	813	Open in IMG/M
3300015374\|Ga0132255_102465867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	794	Open in IMG/M
3300019356\|Ga0173481_10026251	Not Available	1825	Open in IMG/M
3300019356\|Ga0173481_10777178	Not Available	527	Open in IMG/M
3300019361\|Ga0173482_10024482	Not Available	1754	Open in IMG/M
3300019361\|Ga0173482_10088131	Not Available	1101	Open in IMG/M
3300019362\|Ga0173479_10190614	Not Available	856	Open in IMG/M
3300019362\|Ga0173479_10311839	Not Available	722	Open in IMG/M
3300020081\|Ga0206354_10362753	Not Available	623	Open in IMG/M
3300023064\|Ga0247801_1063974	Not Available	580	Open in IMG/M
3300023067\|Ga0247743_1033561	Not Available	706	Open in IMG/M
3300023261\|Ga0247796_1019895	Not Available	1035	Open in IMG/M
3300025315\|Ga0207697_10021176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	2663	Open in IMG/M
3300025321\|Ga0207656_10168217	Not Available	1047	Open in IMG/M
3300025711\|Ga0207696_1202013	Not Available	522	Open in IMG/M
3300025901\|Ga0207688_10218325	Not Available	1148	Open in IMG/M
3300025904\|Ga0207647_10067806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2161	Open in IMG/M
3300025909\|Ga0207705_10596393	Not Available	859	Open in IMG/M
3300025918\|Ga0207662_10184706	Not Available	1343	Open in IMG/M
3300025921\|Ga0207652_10421532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1204	Open in IMG/M
3300025922\|Ga0207646_11580794	Not Available	566	Open in IMG/M
3300025923\|Ga0207681_10739435	Not Available	819	Open in IMG/M
3300025928\|Ga0207700_10327382	Not Available	1329	Open in IMG/M
3300025929\|Ga0207664_11711102	Not Available	551	Open in IMG/M
3300025934\|Ga0207686_10190227	Not Available	1462	Open in IMG/M
3300025936\|Ga0207670_10837056	Not Available	768	Open in IMG/M
3300025937\|Ga0207669_10068160	Not Available	2221	Open in IMG/M
3300025938\|Ga0207704_10372576	Not Available	1118	Open in IMG/M
3300025940\|Ga0207691_11405794	Not Available	573	Open in IMG/M
3300025942\|Ga0207689_10145967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1949	Open in IMG/M
3300025961\|Ga0207712_10173908	Not Available	1686	Open in IMG/M
3300025981\|Ga0207640_10686486	Not Available	876	Open in IMG/M
3300026023\|Ga0207677_11948069	Not Available	546	Open in IMG/M
3300026035\|Ga0207703_11570497	Not Available	633	Open in IMG/M
3300026041\|Ga0207639_10294925	Not Available	1431	Open in IMG/M
3300026078\|Ga0207702_11588340	Not Available	647	Open in IMG/M
3300026078\|Ga0207702_12385764	Not Available	516	Open in IMG/M
3300026116\|Ga0207674_10352621	Not Available	1422	Open in IMG/M
3300026142\|Ga0207698_10321441	Not Available	1449	Open in IMG/M
3300027787\|Ga0209074_10256657	Not Available	681	Open in IMG/M
3300028379\|Ga0268266_10291368	Not Available	1520	Open in IMG/M
3300028379\|Ga0268266_12137171	Not Available	532	Open in IMG/M
3300031740\|Ga0307468_100457922	Not Available	996	Open in IMG/M
3300031847\|Ga0310907_10151953	Not Available	1064	Open in IMG/M
3300031854\|Ga0310904_10055944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1992	Open in IMG/M
3300031908\|Ga0310900_10163681	Not Available	1522	Open in IMG/M
3300032012\|Ga0310902_10059025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1909	Open in IMG/M
3300032017\|Ga0310899_10267974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	782	Open in IMG/M
3300032179\|Ga0310889_10123451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1131	Open in IMG/M
3300032179\|Ga0310889_10511795	Not Available	610	Open in IMG/M
3300032211\|Ga0310896_10294637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	837	Open in IMG/M
3300033551\|Ga0247830_11492721	Not Available	541	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	51.54%
Host-Associated	Host-Associated	48.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.54%
Plants	Host-Associated → Plants	46.92%
Human	Host-Associated → Human	1.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.00%
Digestive System	Host-Associated → Human → Digestive System	1.54%
Roots	Host-Associated → Plants → Roots	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.23%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	19.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.38%
Loam	Environmental → Terrestrial → Soil → Loam	12.31%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.77%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.77%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	19.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.77%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.62%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.77%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.08%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	3.08%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.31%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.31%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.54%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300001989	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5	Host-Associated	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300023067	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10220J13317_102808451	3300001139	Soil	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMP
JGI24739J22299_100317774	3300001989	Corn Rhizosphere	MDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPH
JGI24739J22299_101545941	3300001989	Corn Rhizosphere	RPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
JGI24743J22301_101373161	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDXQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSG
JGI24034J26672_100847931	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	MDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVS
Ga0062589_1027732981	3300004156	Soil	MGSFKRPRVFHPLDLEIMDRVFDAAWAHLEAREPFRDRQKDGELRQVLGKLVFDSAGSDKINFDTLCDRVLASMPDT
Ga0058859_115522861	3300004798	Host-Associated	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0058860_121350281	3300004801	Host-Associated	MGSFKRPRVFHPLDLEILDCVYETAWAHLEAREPFCDRQKDGELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0070658_100668894	3300005327	Corn Rhizosphere	VYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0070658_101394082	3300005327	Corn Rhizosphere	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVSF*
Ga0070683_1001568913	3300005329	Corn Rhizosphere	MGSFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0070690_1000165383	3300005330	Switchgrass Rhizosphere	MDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0070670_1000093862	3300005331	Switchgrass Rhizosphere	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF*
Ga0070689_1000088644	3300005340	Switchgrass Rhizosphere	MGSFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF*
Ga0070668_1000238815	3300005347	Switchgrass Rhizosphere	MDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVSF*
Ga0070669_1003407803	3300005353	Switchgrass Rhizosphere	TAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0070675_1000453141	3300005354	Miscanthus Rhizosphere	DRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0070714_1016160212	3300005435	Agricultural Soil	LEIMDRVYETVWVHLEACEPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPNTWMVFTSGEPHRSPKVST*
Ga0070713_1013042511	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGSFKPPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0070710_100161672	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF*
Ga0070705_1000008663	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLVSMPDTWMVFTSGEPHRSPKVSF*
Ga0070684_1001156832	3300005535	Corn Rhizosphere	MDRVYETAWAHLEAREPFCDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVSF*
Ga0070665_1003023641	3300005548	Switchgrass Rhizosphere	YETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0068854_1003751352	3300005578	Corn Rhizosphere	FHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF*
Ga0068856_1001629401	3300005614	Corn Rhizosphere	DLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0068859_1010915002	3300005617	Switchgrass Rhizosphere	LGFTIHAGVEGEGGPLVCNREVPMGSFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0068861_1000853501	3300005719	Switchgrass Rhizosphere	AHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0068851_101107681	3300005834	Corn Rhizosphere	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0068863_1006576013	3300005841	Switchgrass Rhizosphere	FTIHAGVEGEGGPLVCNREVPMGSFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0070717_112792022	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLVSMPDTWMVFTSGEPHRSPKVST*
Ga0070712_1002437751	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MGSFKRPRVFQPLDLEIMDRVYETVWVHLEACEPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPNTWMVFTSGEPHRSPKVST*
Ga0079222_100868992	3300006755	Agricultural Soil	MDRVFDAAWAHLEAREPFRDRQKDGELQQVLGKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGGPHRSPKVST*
Ga0075428_1005085162	3300006844	Populus Rhizosphere	VYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVSF*
Ga0075425_1003708783	3300006854	Populus Rhizosphere	MDRVFDAAWAHLEAREPFRERQKDGELQQVLGKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGGPHRSPKVST*
Ga0105244_104793331	3300009036	Miscanthus Rhizosphere	LKERGSRRQCNREVPMGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVSF*
Ga0105240_108525112	3300009093	Corn Rhizosphere	MGSFKRPRVFHPLDLEIMDRVFDAAWAHLEAREPFRDRQKDGELQDALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVSF*
Ga0111539_101158914	3300009094	Populus Rhizosphere	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDGQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVSF*
Ga0111538_103378264	3300009156	Populus Rhizosphere	MGSFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRRLVFDSAGSDKINFDTLCDASMPDTWMVFTS
Ga0075423_104428261	3300009162	Populus Rhizosphere	PRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0105241_100414152	3300009174	Corn Rhizosphere	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEARELFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVSF*
Ga0105242_100736153	3300009176	Miscanthus Rhizosphere	SFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0105237_100211204	3300009545	Corn Rhizosphere	MGSFKRPRVFHPLDLAIMDRVYETAWAHLEAREPFGDRQQDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0105249_100696741	3300009553	Switchgrass Rhizosphere	CNREVPMGSFKRPRVFHPLDLEIKDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0134125_100362804	3300010371	Terrestrial Soil	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKSASEPAQAC*
Ga0105239_122617901	3300010375	Corn Rhizosphere	LDLEIMDRVYEAAWAHLEAREPFRDRQNDDELQNALRKLVFDSAGSDKINFDTLCDRVLASMPHTWMVFTSGGLIGRQKSASEPH*
Ga0134121_104223801	3300010401	Terrestrial Soil	KRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0157304_10384101	3300012882	Soil	MGSFKRPRVFHPLDLEIMDRVFDAAWAHLEAREPFRDRQKDGELQQVLGKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGGPHRSPKVST*
Ga0157300_10076991	3300012884	Soil	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFSSGGSHRSPKVST*
Ga0157294_100860561	3300012892	Soil	MGSFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSKGSDKINFDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF*
Ga0157284_102232851	3300012893	Soil	MGSFKPPRVFHPLDLEIMDRVYETAWAHFEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGGPHRSPKVST*
Ga0157309_102667731	3300012895	Soil	RQCNREVPMGYFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF*
Ga0157303_101637972	3300012896	Soil	REPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF*
Ga0157285_100271481	3300012897	Soil	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQIDGELQNALRKLVFDRAGSDKINFDTLCDRVLASMPHTWMVFTSG
Ga0157285_100596511	3300012897	Soil	MGSFKPPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF*
Ga0157299_103247931	3300012899	Soil	MDRVYEAAWAHLEAREPFRDRQNDDELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF*
Ga0157292_104319931	3300012900	Soil	MLALKERGPAGCNREVPMGSFKRPRVFHPLDLEIMDRVYEAAWAHLEAREPFRDRQNDDELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSREPHRSPKGF*
Ga0157291_100489751	3300012902	Soil	MLALKERGPAGCNREVPMGSFKRPRVFHPLDLEILDCVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVSF*
Ga0157296_102694841	3300012905	Soil	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGGPHRSPKVST*
Ga0157283_100911641	3300012907	Soil	LLGFHDPALALKERGSRRQCNREVPMGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDRAGSDKINFDTLCDRVLASMPHTWMVFTSGGLIGRQKSASEPH*
Ga0157301_100124253	3300012911	Soil	VFDAAWAHLEAREPFRDRQKDGELQQVLGKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGGPHRSPKVST*
Ga0157301_100129802	3300012911	Soil	MDCVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF*
Ga0157306_100767262	3300012912	Soil	MDRVFDAAWAHLEAREPFRDRQKDGELQQVLGKLVFDSARSDKINFDTLCDRVLASMPDTWMVFTSGGPHRSPKVST*
Ga0157297_100808481	3300012914	Soil	MDRVYETGWAHLEAREPFRDRQKDGELQQVLGKLVFDSAGSDKINFDTLCDRVLASIPDTWMVFTSGGPHRSPKVST*
Ga0157302_100208673	3300012915	Soil	PRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGGPHRSPKVST*
Ga0157302_103719671	3300012915	Soil	PRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQNDDELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF*
Ga0164301_105997341	3300012960	Soil	MGSFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVSF*
Ga0164302_101252671	3300012961	Soil	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINVDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF*
Ga0164304_115043081	3300012986	Soil	YETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVSF*
Ga0157307_11694281	3300013096	Soil	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVF
Ga0157374_116757621	3300013296	Miscanthus Rhizosphere	SMGSFKRPRVFHPLDLEIMDRVFDAAWAHLEAREPFRDRQKDGELQQVLGKLVFDSAGSDKINFDTLCDRVLASMPHTWMVFTSGGLIGRQKSASEPH*
Ga0157378_101225163	3300013297	Miscanthus Rhizosphere	MLALKERGPAGCNREVPMGSFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0163162_108078112	3300013306	Switchgrass Rhizosphere	VFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0157372_101449511	3300013307	Corn Rhizosphere	VGIGFWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF*
Ga0163163_100131764	3300014325	Switchgrass Rhizosphere	MGSFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSSEPHRSPKVSF*
Ga0157380_100416892	3300014326	Switchgrass Rhizosphere	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQDALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF*
Ga0157377_101221223	3300014745	Miscanthus Rhizosphere	LALKERGSRRQCNREVPMGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF*
Ga0173480_108510721	3300015200	Soil	MGSYKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPHT
Ga0173478_100778822	3300015201	Soil	MGSFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQNDDELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF*
Ga0132256_1013909231	3300015372	Arabidopsis Rhizosphere	RAFHPLDLEIMDRVYEIAWAHIDKGETFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVSF*
Ga0132255_1024658671	3300015374	Arabidopsis Rhizosphere	HSLDLDIMDRVYETAWAHLEPREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF*
Ga0173481_100262512	3300019356	Soil	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVSF
Ga0173481_107771781	3300019356	Soil	MGSFKPPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTW
Ga0173482_100244822	3300019361	Soil	MGSFKRPRVFHPLDLEIMDRVFDAAWANLEAREPFRDRQKDGELQQVLGKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGGPHRSPKVST
Ga0173482_100881311	3300019361	Soil	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF
Ga0173479_101906142	3300019362	Soil	MGSFKRPRVFHPLDLEILDCVYETAWAHLEAREPFCDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF
Ga0173479_103118391	3300019362	Soil	MGSFKPPRAFHPLDLEIMDRVYEAAWAHLEAREPFRDRQNDDELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTW
Ga0206354_103627532	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	KPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0247801_10639741	3300023064	Soil	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSREPHRSPKGF
Ga0247743_10335611	3300023067	Soil	MGSFKRPRVFHPLDLEILDCVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPNTWMVFTSGEPHRSPKVSF
Ga0247796_10198951	3300023261	Soil	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPNTWMVFTSGEPHRSPKVST
Ga0207697_100211761	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0207656_101682171	3300025321	Corn Rhizosphere	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSSEPHRSPKVSF
Ga0207696_12020131	3300025711	Switchgrass Rhizosphere	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0207688_102183252	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	ETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0207647_100678061	3300025904	Corn Rhizosphere	FHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0207705_105963933	3300025909	Corn Rhizosphere	AHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0207662_101847061	3300025918	Switchgrass Rhizosphere	LLGFTIHAGVEGEGGPLVCNREVPMGSFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0207652_104215321	3300025921	Corn Rhizosphere	TAGAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF
Ga0207646_115807941	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	PPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVSF
Ga0207681_107394351	3300025923	Switchgrass Rhizosphere	PRVFHPLDLEIMDRVYVTAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0207700_103273823	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEP
Ga0207664_117111021	3300025929	Agricultural Soil	LEIMDRVYETVWVHLEACEPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPNTWMVFTSGEPHRSPKVST
Ga0207686_101902271	3300025934	Miscanthus Rhizosphere	SFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0207670_108370562	3300025936	Switchgrass Rhizosphere	AHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF
Ga0207669_100681602	3300025937	Miscanthus Rhizosphere	MGSFKRPRVFHPLDLEIKDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0207704_103725761	3300025938	Miscanthus Rhizosphere	LGFTIHAGVEGEGGPLVCNREVPMGSFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0207691_114057942	3300025940	Miscanthus Rhizosphere	KRPRVFHPLDLEIKDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0207689_101459673	3300025942	Miscanthus Rhizosphere	MGSFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVSF
Ga0207712_101739083	3300025961	Switchgrass Rhizosphere	WAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0207640_106864862	3300025981	Corn Rhizosphere	VEGEGGPLVCNREVPMGSFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0207677_119480691	3300026023	Miscanthus Rhizosphere	MGSFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDT
Ga0207703_115704971	3300026035	Switchgrass Rhizosphere	MGSFKRPRVFHHLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0207639_102949252	3300026041	Corn Rhizosphere	GSFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0207702_115883401	3300026078	Corn Rhizosphere	PMGSFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0207702_123857641	3300026078	Corn Rhizosphere	LHREVPMGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVSF
Ga0207674_103526211	3300026116	Corn Rhizosphere	VYVTAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0207698_103214412	3300026142	Corn Rhizosphere	MGSFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0209074_102566571	3300027787	Agricultural Soil	MDRVFDAAWAHLEAREPFRDRQKDGELQQVLGKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGGPHRSPKVST
Ga0268266_102913681	3300028379	Switchgrass Rhizosphere	YETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0268266_121371711	3300028379	Switchgrass Rhizosphere	GSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVSF
Ga0307468_1004579221	3300031740	Hardwood Forest Soil	SLLGFTIHAGVEGEGGPLVCNREVPMGSFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0310907_101519531	3300031847	Soil	PRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0310904_100559443	3300031854	Soil	MGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKSASEPAQAC
Ga0310900_101636813	3300031908	Soil	MGSFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKSQLLSLRSVATVGVRLGAIR
Ga0310902_100590253	3300032012	Soil	MGSFKRPRVFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVSF
Ga0310899_102679741	3300032017	Soil	PLVCNREVPMGSFKRPRVFHPLDLEIMYRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVSF
Ga0310889_101234511	3300032179	Soil	RAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVSF
Ga0310889_105117952	3300032179	Soil	LEIMDRVYETAWAHLEAREPFRDRQKDDELQNALRKLVFDSAGSDKINFDTLCDASMPDTWMVFTSGEPHRSPKVSF
Ga0310896_102946372	3300032211	Soil	FHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMLDTWMVFTSGEPHRSPKVSF
Ga0247830_114927211	3300033551	Soil	ALKERGSRRQCNREVPMGSFKPPRAFHPLDLEIMDRVYETAWAHLEAREPFRDRQKDGELQNALRKLVFDSAGSDKINFDTLCDRVLASMPDTWMVFTSGEPHRSPKVSF

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062968

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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