Metagenome / Metatranscriptome Family F063097

Basic Information
Family ID	F063097
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	103 residues
Representative Sequence	LSVQPGKAADGKSKVVDPANVAANLRDLTVHLHRGNAAEAKTIATQAAEQLQEIIQAGVEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK
Number of Associated Samples	104
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	79.23 %
% of genes near scaffold ends (potentially truncated)	30.77 %
% of genes from short scaffolds (< 2000 bps)	82.31 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Most Common Taxonomy
Group	Unclassified (51.538 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (10.000 % of family members)
Environment Ontology (ENVO)	Unclassified (41.538 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.692 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.64% β-sheet: 0.00% Coil/Unstructured: 44.36%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.24.25.1: TrmE connector domain	d1xzpa1	1xzp	0.85951
f.25.1.1: Cytochrome c oxidase subunit III-like	d7cohc_	7coh	0.83987
a.24.12.0: automated matches	d7bmla_	7bml	0.80466
a.24.18.1: Oxygen-evolving enhancer protein 3,	d1nzea_	1nze	0.80136
a.24.10.4: Sensor-like histidine kinase YojN, C-terminal domain	d1sr2a_	1sr2	0.79747

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF05036	SPOR	26.92
PF12704	MacB_PCD	8.46
PF00313	CSD	7.69
PF00588	SpoU_methylase	1.54
PF09752	ABHD18	1.54
PF12002	MgsA_C	1.54
PF01138	RNase_PH	0.77
PF01011	PQQ	0.77
PF08734	GYD	0.77
PF07238	PilZ	0.77
PF13749	HATPase_c_4	0.77
PF01933	CofD	0.77
PF02452	PemK_toxin	0.77
PF12695	Abhydrolase_5	0.77
PF12867	DinB_2	0.77
PF07676	PD40	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	1.54
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	1.54
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	1.54
COG0391	Archaeal 2-phospho-L-lactate transferase/Bacterial gluconeogenesis factor, CofD/UPF0052 family	Carbohydrate transport and metabolism [G]	0.77
COG0689	Ribonuclease PH	Translation, ribosomal structure and biogenesis [J]	0.77
COG1185	Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	Translation, ribosomal structure and biogenesis [J]	0.77
COG2123	Exosome complex RNA-binding protein Rrp42, RNase PH superfamily	Intracellular trafficking, secretion, and vesicular transport [U]	0.77
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.77
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.77

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.54 %
All Organisms	root	All Organisms	48.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.54 %
cellular organisms	root	All Organisms → cellular organisms	48.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.54 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.54 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	38.46 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.54 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	23.85 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.77 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.54 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	9.23 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	7.69 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.54 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	7.69 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	4.62 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.08 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.77 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.54 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	7.69 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	4.62 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.08 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.77 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.54 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	7.69 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	4.62 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.08 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.77 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y02GML0Q	Not Available	543	Open in IMG/M
2170459018\|G1P06HT01B2UBO	Not Available	693	Open in IMG/M
2170459018\|G1P06HT02JCWRY	Not Available	518	Open in IMG/M
3300000567\|JGI12270J11330_10199700	Not Available	684	Open in IMG/M
3300003995\|Ga0055438_10076612	Not Available	911	Open in IMG/M
3300004019\|Ga0055439_10029741	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1378	Open in IMG/M
3300004100\|Ga0058904_1394575	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	622	Open in IMG/M
3300004104\|Ga0058891_1457132	Not Available	846	Open in IMG/M
3300005093\|Ga0062594_103214546	Not Available	512	Open in IMG/M
3300005329\|Ga0070683_100014857	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6826	Open in IMG/M
3300005329\|Ga0070683_100019509	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6024	Open in IMG/M
3300005329\|Ga0070683_100277139	All Organisms → cellular organisms → Bacteria → Acidobacteria	1595	Open in IMG/M
3300005331\|Ga0070670_102101176	Not Available	520	Open in IMG/M
3300005332\|Ga0066388_103069430	All Organisms → cellular organisms → Bacteria → Acidobacteria	853	Open in IMG/M
3300005333\|Ga0070677_10429584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	702	Open in IMG/M
3300005338\|Ga0068868_100896642	Not Available	806	Open in IMG/M
3300005364\|Ga0070673_100263972	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1505	Open in IMG/M
3300005434\|Ga0070709_10011570	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4921	Open in IMG/M
3300005434\|Ga0070709_10508663	Not Available	916	Open in IMG/M
3300005439\|Ga0070711_100117346	All Organisms → cellular organisms → Bacteria	1963	Open in IMG/M
3300005439\|Ga0070711_101016248	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300005440\|Ga0070705_101286978	Not Available	606	Open in IMG/M
3300005444\|Ga0070694_101633245	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300005518\|Ga0070699_100680846	Not Available	939	Open in IMG/M
3300005534\|Ga0070735_10101332	All Organisms → cellular organisms → Bacteria	1813	Open in IMG/M
3300005535\|Ga0070684_100290649	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1498	Open in IMG/M
3300005535\|Ga0070684_100353784	All Organisms → cellular organisms → Bacteria → Acidobacteria	1351	Open in IMG/M
3300005536\|Ga0070697_100856717	All Organisms → cellular organisms → Bacteria → Acidobacteria	805	Open in IMG/M
3300005539\|Ga0068853_100554208	All Organisms → cellular organisms → Bacteria → Acidobacteria	1089	Open in IMG/M
3300005542\|Ga0070732_10423507	Not Available	804	Open in IMG/M
3300005546\|Ga0070696_100587868	Not Available	896	Open in IMG/M
3300005546\|Ga0070696_101286023	Not Available	620	Open in IMG/M
3300005547\|Ga0070693_100991477	Not Available	635	Open in IMG/M
3300005564\|Ga0070664_100255227	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300005577\|Ga0068857_100003138	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13678	Open in IMG/M
3300005614\|Ga0068856_100618691	Not Available	1104	Open in IMG/M
3300005614\|Ga0068856_102681473	Not Available	504	Open in IMG/M
3300005616\|Ga0068852_100251943	All Organisms → cellular organisms → Bacteria	1692	Open in IMG/M
3300005616\|Ga0068852_101893637	Not Available	619	Open in IMG/M
3300005618\|Ga0068864_101052666	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	808	Open in IMG/M
3300005618\|Ga0068864_102151644	Not Available	564	Open in IMG/M
3300005836\|Ga0074470_10558658	Not Available	545	Open in IMG/M
3300005842\|Ga0068858_100090293	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2851	Open in IMG/M
3300005842\|Ga0068858_100238228	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1726	Open in IMG/M
3300006059\|Ga0075017_100015416	All Organisms → cellular organisms → Bacteria	4908	Open in IMG/M
3300006163\|Ga0070715_11076097	Not Available	505	Open in IMG/M
3300006237\|Ga0097621_100070926	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2878	Open in IMG/M
3300006237\|Ga0097621_100159501	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1938	Open in IMG/M
3300006358\|Ga0068871_101564136	Not Available	624	Open in IMG/M
3300006638\|Ga0075522_10000824	All Organisms → cellular organisms → Bacteria	22955	Open in IMG/M
3300006903\|Ga0075426_11492075	Not Available	514	Open in IMG/M
3300006904\|Ga0075424_102189066	Not Available	582	Open in IMG/M
3300009093\|Ga0105240_10087241	All Organisms → cellular organisms → Bacteria	3821	Open in IMG/M
3300009093\|Ga0105240_10531892	All Organisms → cellular organisms → Bacteria → Acidobacteria	1303	Open in IMG/M
3300009093\|Ga0105240_12326096	Not Available	555	Open in IMG/M
3300009098\|Ga0105245_11076261	Not Available	850	Open in IMG/M
3300009098\|Ga0105245_12995789	Not Available	523	Open in IMG/M
3300009100\|Ga0075418_10834125	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	996	Open in IMG/M
3300009101\|Ga0105247_10852635	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300009148\|Ga0105243_10498625	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300009148\|Ga0105243_10972909	Not Available	849	Open in IMG/M
3300009174\|Ga0105241_11316180	Not Available	689	Open in IMG/M
3300009824\|Ga0116219_10174039	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300010371\|Ga0134125_10272865	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1879	Open in IMG/M
3300010373\|Ga0134128_10027942	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6649	Open in IMG/M
3300010373\|Ga0134128_10033326	All Organisms → cellular organisms → Bacteria → Acidobacteria	6043	Open in IMG/M
3300010379\|Ga0136449_100000745	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	94553	Open in IMG/M
3300010379\|Ga0136449_100091010	All Organisms → cellular organisms → Bacteria → Acidobacteria	6347	Open in IMG/M
3300010397\|Ga0134124_11686813	Not Available	666	Open in IMG/M
3300010399\|Ga0134127_11419642	Not Available	765	Open in IMG/M
3300011119\|Ga0105246_10070373	Not Available	2460	Open in IMG/M
3300011120\|Ga0150983_10501454	Not Available	521	Open in IMG/M
3300011120\|Ga0150983_10539570	Not Available	554	Open in IMG/M
3300011120\|Ga0150983_10695342	Not Available	516	Open in IMG/M
3300012212\|Ga0150985_101418635	Not Available	525	Open in IMG/M
3300012931\|Ga0153915_12977917	Not Available	552	Open in IMG/M
3300012982\|Ga0168317_1004585	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	5475	Open in IMG/M
3300013306\|Ga0163162_10256679	Not Available	1880	Open in IMG/M
3300013307\|Ga0157372_12296972	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300013307\|Ga0157372_13125522	Not Available	528	Open in IMG/M
3300013308\|Ga0157375_10667371	All Organisms → cellular organisms → Bacteria → Acidobacteria	1195	Open in IMG/M
3300014325\|Ga0163163_11808429	Not Available	671	Open in IMG/M
3300014501\|Ga0182024_10432517	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1693	Open in IMG/M
3300014745\|Ga0157377_10166748	All Organisms → cellular organisms → Bacteria → Acidobacteria	1374	Open in IMG/M
3300014968\|Ga0157379_10029700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	4860	Open in IMG/M
3300014969\|Ga0157376_10441379	Not Available	1267	Open in IMG/M
3300017927\|Ga0187824_10302785	Not Available	566	Open in IMG/M
3300020580\|Ga0210403_10265696	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1407	Open in IMG/M
3300020610\|Ga0154015_1450881	Not Available	534	Open in IMG/M
3300021168\|Ga0210406_11237771	Not Available	541	Open in IMG/M
3300021170\|Ga0210400_10246936	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1459	Open in IMG/M
3300021407\|Ga0210383_10075591	All Organisms → cellular organisms → Bacteria → Acidobacteria	2817	Open in IMG/M
3300021432\|Ga0210384_11289805	Not Available	635	Open in IMG/M
3300021478\|Ga0210402_11323727	Not Available	648	Open in IMG/M
3300021478\|Ga0210402_11503493	Not Available	601	Open in IMG/M
3300021559\|Ga0210409_10951171	Not Available	733	Open in IMG/M
3300021559\|Ga0210409_11444809	Not Available	564	Open in IMG/M
3300025862\|Ga0209483_1001357	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	18640	Open in IMG/M
3300025909\|Ga0207705_10851078	Not Available	707	Open in IMG/M
3300025914\|Ga0207671_10209633	All Organisms → cellular organisms → Bacteria → Acidobacteria	1524	Open in IMG/M
3300025916\|Ga0207663_11718171	Not Available	505	Open in IMG/M
3300025920\|Ga0207649_10096133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1951	Open in IMG/M
3300025924\|Ga0207694_10014751	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5892	Open in IMG/M
3300025927\|Ga0207687_11323707	Not Available	619	Open in IMG/M
3300025934\|Ga0207686_10455863	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	984	Open in IMG/M
3300025935\|Ga0207709_10368005	All Organisms → cellular organisms → Bacteria → Acidobacteria	1090	Open in IMG/M
3300025935\|Ga0207709_10456291	Not Available	989	Open in IMG/M
3300025938\|Ga0207704_10109746	Not Available	1862	Open in IMG/M
3300025938\|Ga0207704_11943223	Not Available	506	Open in IMG/M
3300025944\|Ga0207661_10174643	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1872	Open in IMG/M
3300026023\|Ga0207677_10056955	All Organisms → cellular organisms → Bacteria	2681	Open in IMG/M
3300026041\|Ga0207639_10409324	All Organisms → cellular organisms → Bacteria → Acidobacteria	1224	Open in IMG/M
3300027842\|Ga0209580_10456358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300027854\|Ga0209517_10006546	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	14358	Open in IMG/M
3300027986\|Ga0209168_10074817	All Organisms → cellular organisms → Bacteria	1772	Open in IMG/M
3300028380\|Ga0268265_12049431	Not Available	579	Open in IMG/M
3300028381\|Ga0268264_10887431	Not Available	894	Open in IMG/M
3300028792\|Ga0307504_10459024	Not Available	512	Open in IMG/M
3300028800\|Ga0265338_10140755	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1890	Open in IMG/M
3300031231\|Ga0170824_105891236	Not Available	500	Open in IMG/M
3300031232\|Ga0302323_102720110	Not Available	565	Open in IMG/M
3300031247\|Ga0265340_10063464	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1763	Open in IMG/M
3300031726\|Ga0302321_102842465	Not Available	566	Open in IMG/M
3300031938\|Ga0308175_100067544	All Organisms → cellular organisms → Bacteria	3169	Open in IMG/M
3300031996\|Ga0308176_10572174	Not Available	1157	Open in IMG/M
3300032160\|Ga0311301_13001113	Not Available	507	Open in IMG/M
3300032205\|Ga0307472_101392703	Not Available	680	Open in IMG/M
3300033412\|Ga0310810_10012683	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	9908	Open in IMG/M
3300033412\|Ga0310810_10370533	Not Available	1495	Open in IMG/M
3300034090\|Ga0326723_0359716	Not Available	658	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	54.62%
Host-Associated	Host-Associated	43.08%
Engineered	Engineered	2.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.00%
Plants	Host-Associated → Plants	43.08%
Aquatic	Environmental → Aquatic	4.62%
Solid Waste	Engineered → Solid Waste	2.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.62%
Roots	Host-Associated → Plants → Roots	3.08%
Peat	Environmental → Terrestrial → Peat	2.31%
Grass	Engineered → Solid Waste → Grass	2.31%
Freshwater	Environmental → Aquatic → Freshwater	1.54%
Marine	Environmental → Aquatic → Marine	1.54%
Sediment	Environmental → Aquatic → Sediment	1.54%
Geologic	Environmental → Terrestrial → Geologic	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.92%
Loam	Environmental → Terrestrial → Soil → Loam	19.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.23%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.15%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.08%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.31%
Composting	Engineered → Solid Waste → Grass → Composting	2.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.54%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.77%
Mine	Environmental → Terrestrial → Geologic → Mine	0.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.62%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.08%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.31%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	2.31%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.54%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.54%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.54%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.77%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.77%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.38%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.62%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.62%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.31%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	2.31%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.54%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.54%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.54%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.77%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.77%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.77%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.77%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.77%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	0.77%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
2170459018	Litter degradation MG2	Engineered	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004100	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF244 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012982	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_02349030	2170459017	Switchgrass, Maize And Mischanthus Litter	LSVQPGKAGDGKSKVVDPANVAANLRDLTVHLHRNNAAEAKNIAAQAAEQLREIIDSGGEPGGVTTARAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK
2MG_01775310	2170459018	Switchgrass, Maize And Mischanthus Litter	LSVQPGKAADGKSKVVDPANVAANLRDLTVHLHRNNAAEAKTIAARAAEQLQEIIQAGGEPEGILMGRAQQTMFAIEEVRIMLSQDDVDGALAAARAPPKEWRVK
2MG_02248800	2170459018	Switchgrass, Maize And Mischanthus Litter	LSVQPGKAGDGKSKLVDPANVAANLRDLTVHLHRNNAAEAKTIAAQAAAQLREIIESGDEPGGVTVTRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK
JGI12270J11330_101997002	3300000567	Peatlands Soil	LSVQPGKAAAGKSKVVDPANVAANLRDLTVHLHRGNAAEAKTIAKQAAEQLQEIIQAGDEAEGVLIARAQQTMFAIEEVGIMLSQDDVNGALAAARDAAKEWRIK*
Ga0055438_100766122	3300003995	Natural And Restored Wetlands	LSSQAGKAGESKSKLADTANVVANLRDLTVHLHRGNTAEARIIVAQAAEQLQEIIVSGDEPGSLLIGKAQQTLFAIEEVRILLAQDDVNGALAAARDATKEWRVK*
Ga0055439_100297411	3300004019	Natural And Restored Wetlands	LSSQPGKAGESKPKLVDTANVVANLRDLTVHLHRGNTAEARTIVAQAAEQLQEIIVSGDEPGSVLIGKAQQTLFAIEEVKILLAQDDVNGALAAARDATKEWRVK*
Ga0058904_13945752	3300004100	Forest Soil	LSSQPGKAGEGKPKLVDFSNVVANLRDLSVHLHRGNAAEAKTIAAQAAETLQEIILAGDEPGSFVIGRAQQTLFAIEEVRILLSQDDVNGALAAARDASKEWRQQLAPSAKSK*
Ga0058891_14571321	3300004104	Forest Soil	LSSQPGKAGEGKPKVVDLANVVANLRDLTVHLHRGNAAEATTIAAEAAERLQEIIVAGDEPGSFLIGRAQQTLFAIEEVRIMLSQDDVNGALAAARDAAKEWRQQLAPAKSK*
Ga0062594_1032145461	3300005093	Soil	LSLQPGKAADGKPKVVDPANVAANLRDLTVHLHRGNAAEAKTIATHAAEQLQEILQADSEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRLK*
Ga0070683_1000148574	3300005329	Corn Rhizosphere	LSAQPDKAADGKAKVADPATVAANLRDLTVHLHRGNAAEAKKIAALAAEQLQEIIQAGVEPEGILMGKAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0070683_1000195094	3300005329	Corn Rhizosphere	LSGQPGKAADGKPKVADPANVAANLRDLTVHLHRGNAAEAKTIAAQAAEQLQEIIQAGDESESVLIARAQQTMFAIEEVRIMLAQDDVNGALAAARDAAKEWRQQLAKSK*
Ga0070683_1002771393	3300005329	Corn Rhizosphere	LSVQPGKAADGKSKVVDPANVAANLRDLTVHLHRNNAAEAKTIAARAAEQLQEIIQAGGEPEGILMGRAQQTMFAIEEVRIMLSQDDVDGALAAARDAAKEWRVK*
Ga0070670_1021011761	3300005331	Switchgrass Rhizosphere	FQNRRSPSLSLQPGKAADGKPKVVDPANVAANLRDLTVHLHRGNAAEAKTIATHAAEQLQEILQADSEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRIK*
Ga0066388_1030694302	3300005332	Tropical Forest Soil	MSEPKPADPANVVANLRDLTVHLHRGNAAEANTLAAQAADQLKEIILAGDQPGSSVTGRAQQTLFAIEEVRILLAEDDVNGALAAARDAAKEWRQQLAPGANTK*
Ga0070677_104295842	3300005333	Miscanthus Rhizosphere	LSSQPGKAGESKAKLADTANVVANLRDLTVHLHRGNTAEARTIVAQAAEQLQEIIVSGDEPGSVGKAQQTLFAIEEVRILLAQDDVNGALAAARDATKEWRVK*
Ga0068868_1008966421	3300005338	Miscanthus Rhizosphere	LSLQPGKAADGKPKVVDPANVAANLRDLTVHLHRGNAAEAKTIATHAAEQLQEILQADSEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEW
Ga0070673_1002639724	3300005364	Switchgrass Rhizosphere	LSLQPGKAADGKPKVVDPANVAANLRDLTVHLHRGNAAEAKTIATQAAEQLQEILQADSEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRLK*
Ga0070709_100115703	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LSLQAGKAGEGKPKLADTSNLVANLRDLSVHLHRGNAAEAKTIAAEAAERLKEIIVAGDEPGSLLIGRAQQTLFAIEEVRILLAEDDVNGALAAARDASKEWRQQLAPNAKSK*
Ga0070709_105086632	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LSVQPGKAADGKAKVVDPANVAANLRDLTVHLHRGNAAEAKTIATQAAEQLQEILQAGDAPAGILVERAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0070711_1001173462	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LSVQPGKAGDGKSKLVDPANVAANLRDLTVHLHRNNAAEAKTIAAQAAEQLREIIESGGEPGGVIAARAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0070711_1010162482	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LSVQPGKAADGKSKIVDPANVAANLRDLTVHLHRGNAAEAKTIASQAAEQLQEIIQAGVEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0070705_1012869781	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LSVQPGKAADGKPKVVDPANVAANLRDLTVHLHRGNAAEAKTIATQAAEQLQEILQADSEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRLK*
Ga0070694_1016332452	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	DGKPKVVDPANVAANLRDLTVHLHRGNAAEAKTIATQAAEQLQEILQADSEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRLK*
Ga0070699_1006808462	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LSSQPGKAGESKPKLADTANVVANLRDLTVHLHRGNTAEARTIVAQAAEQLQEIIVSGDEPGSVLIGKAQQTLFAIEEVKILLAQDDVNGALAAARDATKEWRVK*
Ga0070735_101013322	3300005534	Surface Soil	LSVQPGKAGDGKSKVADPANVAANLRDLTVHLHRNNAAEAKTIAAQAAEQLREIIESGEEPGGVTVARAQQTMFAIEEVRIMLSQDDVNGALAAARDASKEWRVK*
Ga0070684_1002906492	3300005535	Corn Rhizosphere	VQPGKAADGKSKVVDPANVAANLRDLTVHLHRNNAAEAKTIAARAAEQLQEIIQAGGEPEGILMGRAQQTMFAIEEVRIMLSQDDVDGALAAARDAAKEWRVK*
Ga0070684_1003537841	3300005535	Corn Rhizosphere	LSIQPGKAGDGKSKVVDPANVAANLRDLTVHLHRNNAAEAKTIAAQAAEQLQEIIESGDEPGGVTIARAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0070697_1008567172	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VANLRDLTVHLHRGNAAEAKTIAAEAAERLQEIILAGDEPGSFVIGRAQQTLFAIEEVRILLAQDDVNGALAAARDAAKEWRQQLAPAKSK*
Ga0068853_1005542081	3300005539	Corn Rhizosphere	QPGKAADGKSKVVDPANVAANLRDLTVHLHRNNAAEAKTIAARAAEQLQEIIQAGGEPEGILMGRAQQTMFAIEEVRIMLSQDDVDGALAAARDAAKEWRVK*
Ga0070732_104235072	3300005542	Surface Soil	LSLQPGKAAEGKSKLADTSTLVANLRDLTVHLHRGNAAAAKTIAAEAAERLQEIIVSGDEPGSFLIGRAQQTLFAIEEVRIMLAEDDVNGALAAARDAAKEWRQQLTTPGAKSK*
Ga0070696_1005878682	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VQPGKAADGKPKVVDPANVAANLRDLTVHLHRGNAAEAKTIATQAAEQLQEILHAGSEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRLK*
Ga0070696_1012860231	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	SGQPGKAADGKPKVADPANVAANLRDLTVHLHRGNAAEAKTIAAQAAEQLQEIIQAGDESESVLIARAQQTMFAIEEVRIMLAQDDVNGALAAARDAAKEWRQQLAKSK*
Ga0070693_1009914771	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	LSVQPGKAADGKSKVVDPANVAANLRDLTVHLHRGNAAEAKTIAGQAAEQLQEIIQAGVEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRAK*
Ga0070664_1002552273	3300005564	Corn Rhizosphere	SLSVQPGKAADGKSKVVDPANVAANLRDLTVHLHRGNAAEAKTIAGQAAEQLQEIIQAGVEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0068857_1000031381	3300005577	Corn Rhizosphere	LCLSGQPGKAADGKPKVADPANVAANLRDLTVHLHRGNAAEAKTIAAQAAEQLQEIIQAGDESESVLIARAQQTMFAIEEVRIMLAQDDVNGALAAARDAAKEWRQQLAKSK*
Ga0068856_1006186912	3300005614	Corn Rhizosphere	VQPGKAADGKSKVVDPANVAANLRDLTVHLHRGNAAEAKTIATQAAEQLQEIIQAGVEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0068856_1026814731	3300005614	Corn Rhizosphere	SRSLSVQPGKAADGKSKVVDPANVAANLRDLTVHLHRNNAAEAKTIAARAAEQLQEIIQAGGEPEGILMGRAQQTMFAIEEVRIMLSQDDVDGALAAARDAAKEWRVK*
Ga0068852_1002519435	3300005616	Corn Rhizosphere	LSVQPGKAADGKSKVVDPANVAANLRDLTVHLHRGNAAEAKTIATHAAEQLQEILQADSEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRIK*
Ga0068852_1018936372	3300005616	Corn Rhizosphere	PANVAANLRDLTVHLHRGNAAEAKTIATQAAEQLQEIIQAGDEPESVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0068864_1010526662	3300005618	Switchgrass Rhizosphere	GESKAKLADTANVVANLRDLTVHLHRGNTAEARTIVAQAAEQLQEIIVSGDEPGSVGKAQQTLFAIEEVRILLAQDDVNGALAAARDATKEWRVK*
Ga0068864_1021516441	3300005618	Switchgrass Rhizosphere	LSVQPGKAADGKAKVVDPATVAANLRDLTVHLHRGNAAEAKTIAAQAAEQLQEIIQAGVEPEGILMGKAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0074470_105586581	3300005836	Sediment (Intertidal)	LSVQPGKAADGKPKVVDPANVAANLRDLSVHLHRGNAAEAKTIAAQAAEQLQEIISSGDEPESFIIARAQQTLFAIEEVRIMLSQDDVNGALAAARDASKEWRQQLAPAAKSK*
Ga0068858_1000902934	3300005842	Switchgrass Rhizosphere	LSVQPGKAADGKSKVVDPANVAANLRDLTVHLHRGNAAEAKTIAGQAAEQLQEIIQAGVEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0068858_1002382282	3300005842	Switchgrass Rhizosphere	LSLQPGKAADGKPKVVDPANVAANLRDLTVHLHRGNAAEAKTIATHAAEQLQEILQADSEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRIK*
Ga0075017_1000154161	3300006059	Watersheds	LSVQPGEGKSSPVDVATVVANLRDLTVHLHRGNAEAASKIAAQAADQLQLIIVSGGEPESARAQQTLFAIEEVRIMLAQDDVNGALAASRDASKEWRTAVR*
Ga0070715_110760972	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LSVQPGKAADSKPKAVDPANVAANLRDLTVHLHRGNAAEAKNIAAQAAEQLQELIQAGVEPEGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWR
Ga0097621_1000709264	3300006237	Miscanthus Rhizosphere	LSSQPGKAGEGKPKLADTANVVANLRDLTVHLHRGNTAEARTIVAQAAEQLQEIIVSGDEPGSVLIGKAQQTLFAIEEVKILLAQDDVNGALAAARDATKEWRVK*
Ga0097621_1001595014	3300006237	Miscanthus Rhizosphere	LSVQPGKAGEGKPKLVDPANVVANLRDLTVHLHRGNTTEATTIAAQAAEQLQEIILAGDEPGSFVIGRAQQTLFAIEEVRILLSQDDVN
Ga0068871_1015641362	3300006358	Miscanthus Rhizosphere	LSVQPGKAADGKSKVVDPANVAANLRDLTVHLHRGNAAEARNIVAQAAEQLQEIIQAGADSEGVLTGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAK
Ga0075522_1000082424	3300006638	Arctic Peat Soil	LSVQPGKAAAGKPKVVDPANVAANLRDLTVHLHRGNAAEAKTIAAQAAEQLQEIIQADDPESVLIARAQQTMFAIEEVRIMLSQDDVNGALAAARDATKEWRIK*
Ga0075426_114920751	3300006903	Populus Rhizosphere	LSVQPGKAADSKPKAVDPANVAANLRDLTVHLHRGNAAEAKTIAAQAAEQLQELIQAGVEPEGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRLK*
Ga0075424_1021890661	3300006904	Populus Rhizosphere	VSSQPGTTGTGKPKLDSSNVVANLRDLTVHLHRGNAAEAKTIAAEAAERLQEIILAGDEPGSFVIGRAQQTLFAIEEVRILLAQDDVNGALAAARDAAKEWRQ
Ga0105240_100872412	3300009093	Corn Rhizosphere	LSVQPGKAADGKSKVVDPANVAANLRDLTVHLHRGNAAEAKTIATQAAEQLQEIIQAGVEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0105240_105318922	3300009093	Corn Rhizosphere	LSVQPGKAGDGKSKVVDPANVAANLRDLTVHLHRNNAAEAKTIAAQAAEQLQEIIESGDEPGGVTIARAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0105240_123260961	3300009093	Corn Rhizosphere	LSVQPGKAADGKPKVVDPANVAANLRDLTVHLHRGNAAEARTIATQAAEQLQEILQADSEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEW
Ga0105245_110762612	3300009098	Miscanthus Rhizosphere	VQPGKAADGKAKVVDPATVAANLRDLTVHLHRGNAAEAKTIAAQAAEQLQEIIQAGVEPEGILMGKAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0105245_129957892	3300009098	Miscanthus Rhizosphere	LSAQPDKAADGKAKVADPATVAANLRDLTVHLHRGNTVEAKNIAALAAEQLQEIIKSGVEPEGILMGKAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0075418_108341252	3300009100	Populus Rhizosphere	LQPGKAGEGKPKLVDPANVVANLRDLTVHLHRGNAAAATTIASQAAEQLQEIIASGDDGRAQQTLFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0105247_108526352	3300009101	Switchgrass Rhizosphere	LSSQPGKAGESKPKLADTANVVANLRDLTVHLHRGNTAEARTIVAQAAEQLQEIIVSGDEPGSVGKAQQTLFAIEEVRILLAQDDVNGALAAARDATKEWRVK*
Ga0105243_104986251	3300009148	Miscanthus Rhizosphere	DGKPKVVDPANVAANLRDLTVHLHRGNAAEAKTIATQAAEQLQEILHAGSEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRLK*
Ga0105243_109729091	3300009148	Miscanthus Rhizosphere	TANVVANLRDLTVHLHRGNTAEARTIVAQAAEQLQEIIVSGDEPGSVLIGKAQQTLFAIEEVKILLAQDDVNGALAAARDATKEWRVK*
Ga0105241_113161801	3300009174	Corn Rhizosphere	INCEDLRLSAQPDKAADGKAKVADPATVAANLRDLTVHLHRGNAAEAKKIAALAAEQLQEIIQAGVEPEGILMGKAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0116219_101740393	3300009824	Peatlands Soil	LQIDHRSPSLSVQPGKAAAGKSKVVDPANVAANLRDLTVHLHRGNAAEAKTIAKQAAEQLQEIIQAGDEAEGVLIARAQQTMFAIEEVGIMLSQDDVNGALAAARDAAKEWRIK*
Ga0134125_102728653	3300010371	Terrestrial Soil	VQPGKAADGKPKVVDPANVAANLRDLTVHLHRGNAAEAKTIATQAAEQLQEIIQAGDEPESVLVGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRIK*
Ga0134128_100279424	3300010373	Terrestrial Soil	LSGQPGKAADGKPKVADPANVAANLRDLTVHLHRGNAAEAKTIAAQAAEQLQEIIQAGDESESVLIARAQQTMFAIEEFRIMLAQDDVNGALAAARDAAKEWRQHLAKSK*
Ga0134128_100333263	3300010373	Terrestrial Soil	LSLQAGKAGEGKPKLADTSNLVANLRDLSVHLHRGNAAEAKTIAAEAAERLKEIIVAADEPGSLLIGRAQQTLFAIEEVRILLAEDDVNGALAAARDASKEWRQQLAPNAKSK*
Ga0136449_1000007458	3300010379	Peatlands Soil	VDPANVAANLRDLTVHLHRGNAAEAKTIAKQAAEQLQEIIQAGDEAEGVLIARAQQTMFAIEEVGIMLSQDDVNGALAAARDAAKEWRIK*
Ga0136449_1000910108	3300010379	Peatlands Soil	LSVQPGKAGDGKSKVVDPANVAANLRDLTVHLHRNNAAEAKIIAAQAAEQLREIIESGDEPGGVTTARAQQTMFAIEEVRIMLSQDDLNGALAAARDAAKEWRVK*
Ga0134124_116868132	3300010397	Terrestrial Soil	VQPGKAADGKAKVVDPATVAANLRDLTVHLHRGNAAEAKTIAAQAAEQLQEIIQAGVEPEGILMGKAQQTMFAIEEVRIMLSQDDVNGALAAARDAAK
Ga0134127_114196422	3300010399	Terrestrial Soil	LSVQPGKAADGKPKVVDPANVAANLRDLTVHLHRGNAAEAKTIATHAAEQLQEILQADSEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRIK*
Ga0105246_100703734	3300011119	Miscanthus Rhizosphere	VQPGKAADGKPKVVDPANVAANLRDLTVHLHRGNAAEAKTIATQAAEQLQEILQADSEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRIK*
Ga0150983_105014542	3300011120	Forest Soil	VGDGKPKLADSSNLVANLRDLTVHLHRGNAAEAKTIAAQAAERLQEIIVSGDESGSRAQQTLFAIEEVRIMLAEDDVNGALAAARDAAKEWRQQLAPSAKSK*
Ga0150983_105395702	3300011120	Forest Soil	LSVQPGKAGDGKSKVVDPANVAANLRDLTVHLHRNNAAEAKTIAAQAAEQLREIIDSGDEPGGVTIARAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0150983_106953422	3300011120	Forest Soil	LSVQPGKAADGKSKLVDPANVVANLRDLTVHLHRGNAAEAKTIAAQAAGQLQEIIEAGDEPGGVIAARAQQTLFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0150985_1014186351	3300012212	Avena Fatua Rhizosphere	VAENLRDLTVQLHRGNAVAAKTIAAQAAEQLQEIIQAGVEPEGVLMGKAQQTMFAIEEVRIMLSEDDVSGALAAARDAAKEWRVK*
Ga0153915_129779172	3300012931	Freshwater Wetlands	GKAADGKAKVADPANVAANLRDLTVHLHWGNTAEAKTIAAQAAEQLQEIIQSDEPESVLIARAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRIK*
Ga0168317_10045855	3300012982	Weathered Mine Tailings	LSVQPGKAADGKAKVVDPANVAANLRDLTVHLHRGNAAEAKTIATQAAEQLQEILQAGGAPAGILAERAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0163162_102566794	3300013306	Switchgrass Rhizosphere	LSLQPGKAADGKPKVVDPANVAANLRDLTVHLHRGNAAEAKTIATHAAEQLQEILQADSEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGAIAAARDAAKEWRLK*
Ga0157372_122969721	3300013307	Corn Rhizosphere	DGKSKVVDPANVAANLRDLTVHLHRNNAAEAKTIAARAAEQLQEIIQAGGEPEGILMGRAQQTMFAIEEVRIMLSQDDVDGALAAARDAAKEWRVK*
Ga0157372_131255221	3300013307	Corn Rhizosphere	LSAQPDKAADGKAKVADPATVAANLRDLTVHLHRGNAAEAKKIAALAAEQLQEIIQAGVEPEGILMGKAQQTMFAIEEVRIMLSQDDVNGALAAARDA
Ga0157375_106673712	3300013308	Miscanthus Rhizosphere	VDPANVAANLRDLTVHLHRGNAAEAKTIAGQAAEQLQEIIQAGVEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0163163_118084291	3300014325	Switchgrass Rhizosphere	VATVVANLRDLTVHLHRGNAAEATKIAAQAAGQLQEIIGAGGEPETARAQQTLFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0182024_104325173	3300014501	Permafrost	LSVQPGKAGDGKSKLVDPANVAANLRDLTVHLHRNNAAEAKTIAAQAAEQLREIIESGDEPGGVTIARAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0157377_101667483	3300014745	Miscanthus Rhizosphere	LSVQPGKAADGKSKIVDPANVAANLRDLTVHLHRGNAAEAKTIAGQAAEQLQEIIQAGVEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0157379_100297002	3300014968	Switchgrass Rhizosphere	LSVQPGKAADGKSKVVDPANVAANLRDLTVHLHRGNAAEARNIVAQAAEQLQEIIQAGADSEGVLTGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK*
Ga0157376_104413792	3300014969	Miscanthus Rhizosphere	VQPGKAGEGKPKLVDPANVVANLRDLTVHLHRGNTTEATTIAAQAAEQLQEIILAGDEPGSFVIGRAQQTLFAIEEVRILLSQDDVNGALAAARDAAKEWRQQLAPSSAKAK*
Ga0187824_103027851	3300017927	Freshwater Sediment	LSLQPGKAAAGKPKLVDSSNLVANLRDLTVHLHRGNAAEAKTIAAEATECLQEIIRSGDESGSFLAGRAQQTLFAIEEVSIMLAEDDVNGALAAARDAAKEWRQQLAPGA
Ga0210403_102656961	3300020580	Soil	LSSQPGKAGEGKPKLVDFSNVVANLRDLSVHLHRGNAAEAKTIAAQAAETLQEIILAGDEPGSFVIGRAQQTLFAIEEVRILLSQDDVNGALAAARDASKEWRQQLAPSAKSK
Ga0154015_14508811	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	LSGQPGKAADGKPKVADPANVAANLRDLTVHLHRGNAAEAKTIAAQAAEQLQEIIQAGDESESVLIARAQQTMFAIEEVRIMLAQDDVNGALAAARDAAKEWRQQLAKSK
Ga0210406_112377712	3300021168	Soil	LSSQPGKAGEGKPKVVDLANVVANLRDLTVHLHRGNAAEATTIAAEAAERLQEIIVAGDEPGSFLIGRAQQTLFAIEEVRIMLSQDDVNGALAAARDAAKEWRQQLAPAKSK
Ga0210400_102469364	3300021170	Soil	LSVQPGKAADGKSKVVDPANVAANLRDLTVHLHRGNAAEAKTIASQAAEQLQEIIQAGVEPEGVLIGRAQQTMFAIEEVRIMLSQDD
Ga0210383_100755914	3300021407	Soil	LSVQPGKAGDGKSKVADPANVAANLRDLTVHLHRNNAAEAKTIAAQAAEQLREIIDSGDEPGGVTAARAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK
Ga0210384_112898051	3300021432	Soil	LSSQPGKAGDGRTKLADSSNLVANLRDLTVHLHRGNAAEAKTIAAQAAERLQEIIVSGDESGSRAQQTLFAIEEVRIMLAEDDVNGALAAARDAAKEWRQQLAPSAKSK
Ga0210402_113237272	3300021478	Soil	LSSQPSKAGEGKPKLVDVSNVVANLRDLTVHLHRGNAAAAKTIAAQAAEQLQEIIVSGEEPGSSLIGRAQQTLFAIEEVRIMLSQDDVNGALAAARDAGKEWRVKSK
Ga0210402_115034931	3300021478	Soil	LSVQPGKAGDGKSKVVDPANVAANLRDLTVHLHRNNAAEAKTIAAQAAEQLREIIDSGDEPGGVTIARAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK
Ga0210409_109511711	3300021559	Soil	LSSQPSKAGEGKPKLVDFSNVVANLRDLTVHLHRGNAAAAKTIAAQAAVQLQEIIGSGEEPGSFLIGRAQQTLFAIEEVRIMLAQDDVNGALAAARDAGKEWRQQPAPAKS
Ga0210409_114448092	3300021559	Soil	LSSQPGKAGDGRTKLADSSNLVANLRDLTVHLHRGNAAEARTIAAQAAERLQEIIVSGDESGSRAQQTLFAIEEVRIMLAEDDVNGALAAA
Ga0209483_100135717	3300025862	Arctic Peat Soil	LSVQPGKAAAGKPKVVDPANVAANLRDLTVHLHRGNAAEAKTIAAQAAEQLQEIIQADDPESVLIARAQQTMFAIEEVRIMLSQDDVNGALAAARDATKEWRIK
Ga0207705_108510782	3300025909	Corn Rhizosphere	LSVQPGKAADGKSKVVDPANVAANLRDLTVHLHRGNAAEAKTIATQAAEQLQEIIQAGVEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK
Ga0207671_102096332	3300025914	Corn Rhizosphere	LSVQPGKAADGKSKVVDPANVAANLRDLTVHLHRNNAAEAKTIAARAAEQLQEIIQAGGEPEGILMGRAQQTMFAIEEVRIMLSQDDVDGALAAARDAAKEWRVK
Ga0207663_117181711	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	NTRSFCLSVQPGKAADGKAKVVDPANVAANLRDLTVHLHRGNAAEAKTIATQAAEQLQEILQAGDAPAGILVERAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK
Ga0207649_100961333	3300025920	Corn Rhizosphere	ILQNDHWSLCLSGQPGKAADGKPKVADPANVAANLRDLTVHLHRGNAAEAKTIAAQAAEQLQEIIQAGDESESVLIARAQQTMFAIEEVRIMLAQDDVNGALAAARDAAKEWRQQLAKSK
Ga0207694_100147515	3300025924	Corn Rhizosphere	LSVQPGKAADGKSKVVDPANVAANLRDLTVHLHRGNAAEAKTIAGQAAEQLQEIIQAGVEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK
Ga0207687_113237071	3300025927	Miscanthus Rhizosphere	LSVQPGKAADGKSKVVDPANVAANLRDLTVHLHRGNAAEARNIVAQAAEQLQEIIQAGADSEGVLTGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK
Ga0207686_104558632	3300025934	Miscanthus Rhizosphere	LSSQPGKAGEGKPKLADTANVVANLRDLTVHLHRGNTAEARTIVAQAAEQLQEIIVSGDEPGSVGKAQQTLFAIEEVRILLAQDDVNGALAAARDATKEWRVK
Ga0207709_103680051	3300025935	Miscanthus Rhizosphere	KPKLADTANVVANLRDLTVHLHRGNTAEARTIVAQAAEQLQEIIVSGDEPGSVGKAQQTLFAIEEVRILLAQDDVNGALAAARDATKEWRVK
Ga0207709_104562912	3300025935	Miscanthus Rhizosphere	LSSQPGKAGEGKPKLADTANVVANLRDLTVHLHRGNTAEARTIVAQAAEQLQEIIVSGDEPGSVLIGKAQQTLFAIEEVKILLAQDDVNGALAAARDATKEWRVK
Ga0207704_101097462	3300025938	Miscanthus Rhizosphere	LSSQPGKAGESKAKLADTANVVANLRDLTVHLHRGNTAEARTIVAQAAEQLQEIIVSGDEPGSVGKAQQTLFAIEEVRILLAQDDVNGALAAARDATKEWRVK
Ga0207704_119432231	3300025938	Miscanthus Rhizosphere	AANLRDLTVHLHRGNAAEAKTIATQAAEQLQEILHAGSEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRLK
Ga0207661_101746433	3300025944	Corn Rhizosphere	LSAQPDKAADGKAKVADPATVAANLRDLTVHLHRGNAAEAKKIAALAAEQLQEIIQAGVEPEGILMGKAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK
Ga0207677_100569554	3300026023	Miscanthus Rhizosphere	LSLQPGKAADGKPKVVDPANVAANLRDLTVHLHRGNAAEAKTIATHAAEQLQEILQADSEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRIK
Ga0207639_104093243	3300026041	Corn Rhizosphere	RSLSVQPGKGADGKSKVVDPANVAANLRDLTVHLHRNNAAEAKTIAARAAEQLQEIIQAGGEPEGILMGRAQQTMFAIEEVRIMLSQDDVDGALAAARDAAKEWRVK
Ga0209580_104563582	3300027842	Surface Soil	LSLQPGKAAEGKSKLADTSTLVANLRDLTVHLHRGNAAAAKTIAAEAAERLQEIIVSGDEPGSFLIGRAQQTLFAIEEVRIMLAEDDVNGALAAARDAAKEWRQQLTTPGAKSK
Ga0209517_100065469	3300027854	Peatlands Soil	LSVQPGKAAAGKSKVVDPANVAANLRDLTVHLHRGNAAEAKTIAKQAAEQLQEIIQAGDEAEGVLIARAQQTMFAIEEVGIMLSQDDVNGALAAARDAAKEWRIK
Ga0209168_100748173	3300027986	Surface Soil	LSVQPGKAGDGKSKVADPANVAANLRDLTVHLHRNNAAEAKTIAAQAAEQLREIIESGEEPGGVTVARAQQTMFAIEEVRIMLSQDDVNGALAAARDASKEWRVK
Ga0268265_120494311	3300028380	Switchgrass Rhizosphere	LSSQPGKAGESKAKLADTANVVANLRDLTVHLHRGNTAEARTIVAQAAEQLQEIIVSGDEPGSVGKAQQTLFAIEEVRILLAQDDVNG
Ga0268264_108874311	3300028381	Switchgrass Rhizosphere	LSLQPGKAADGKPKVVDPANVAANLRDLTVHLHRGNAAEAKTIATQAAEQLQEILQADSEPEGVLIGRAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRLK
Ga0307504_104590241	3300028792	Soil	LSLQPGKAGAGKPKLDDTSTLVANLRDLTVHLHRGNAAEAKTIAAQATERLQEIIRSGDEPGSFLAGRAQQTLFAIEEVRIMLAEDDVNGALAAARDAAKEWRQQLVPTTKSK
Ga0265338_101407552	3300028800	Rhizosphere	LSVQPGKAGDGKSKVVDPANVAANLRDLTVHLHRNNAAEAKTIAAQAAEQLREIIESGDEPGGVTTARAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK
Ga0170824_1058912362	3300031231	Forest Soil	LSSQPIKAGEGKPKLVDTSNVVANLRDLTVHLHRGNAAAAKTIAAQAAEQLQEIIVSGEEPGSVLIGRAQQTLFAIEEVRIMLAQDDVNGALAAARDAGKEWRVK
Ga0302323_1027201102	3300031232	Fen	LSVQPGKAADGKPKVVDPATVAANLRDLTVHLHRNNAAEAKIIAAQAAEQLREIIESGDEAVGVIAARAQQTMFAIEEVRIMLSQDD
Ga0265340_100634644	3300031247	Rhizosphere	LSVQPGKAADGKAKVVDPATVAENLRDLTVHLHRGNADAAKTIAAQAAEQLQTIIQAGVEPEGILMGKAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK
Ga0302321_1028424651	3300031726	Fen	LSVQPGKAGDGKSKLVDPATVAANLRDLTVHLHRNNAAEAKTIAAQAAEQLREIIESGEEPGGVTIARAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK
Ga0308175_1000675442	3300031938	Soil	LSVPPSKASEGKSKVVDPATIAANLRDLTVHLHRGNATEAKTIATQAAEQLQGILQAGDAPEGVLVERAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK
Ga0308176_105721742	3300031996	Soil	KASEGKSKVVDPATIAANLRDLTVHLHRGNATEAKTIATQAAEQLQGILQAGDAPEGVLVERAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRVK
Ga0311301_130011131	3300032160	Peatlands Soil	LSVQPGKAGDGKSKVVDPANVAANLRDLTVHLHRNNAAEAKIIAAQAAEQLREIIESGDEPGGVTTARAQQTMFAIEEVRIMLSQDDLNGALAAARDAAKEWRVK
Ga0307472_1013927032	3300032205	Hardwood Forest Soil	KSKVVDPANVAANLRDLTVHLHRNNAAEAKTIAALAAEQLREIIDSGDEPGGVTAARAQQTMFAIEEVRIMLSQDDVNGALAAARDAAKEWRLK
Ga0310810_100126838	3300033412	Soil	LSSQPGKAGESKPKLTDTANVVANLRDLTVHLHRGNTAEARTIVAQAAEQLQEIIVSGDEPGSVLIGKAQQTLFAIEEVRILLAQDDVNGALAAARDATKEWRVK
Ga0310810_103705332	3300033412	Soil	VVANLRDLTVHLHRGNAAEAKTIAAQAAAQLQEIIVSGEEPGSFLIGRAQQTLFAIEEVRIMLAQDDVNGALAAARDAGKEWRQQPGAKPR
Ga0326723_0359716_362_658	3300034090	Peat Soil	VQPGKAADGKPKVADPATVTANLRDLTVHLHRGNAAEAKTIATQAAAQLQEIIQSGDESEGVLIGRAQQTMFAVEEVRIMLSQDDVNGALAAARDAAKE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063097

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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