Metagenome / Metatranscriptome Family F063105

Basic Information
Family ID	F063105
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	58 residues
Representative Sequence	HEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGVNIHAHGD
Number of Associated Samples	114
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	77.69 %
% of genes from short scaffolds (< 2000 bps)	80.77 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (78.462 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (13.846 % of family members)
Environment Ontology (ENVO)	Unclassified (31.538 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.077 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.28% β-sheet: 0.00% Coil/Unstructured: 51.72%
Feature Viewer

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Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00436	SSB	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.77
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.77

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.46 %
Unclassified	root	N/A	21.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.46 %
Unclassified	root	N/A	21.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.46 %
Unclassified	root	N/A	21.54 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	75.38 %
Unclassified	root	N/A	21.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.54 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.00 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.00 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.00 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	2.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.00 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.00 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10097997	Not Available	2109	Open in IMG/M
3300001593\|JGI12635J15846_10470003	All Organisms → cellular organisms → Bacteria → Acidobacteria	746	Open in IMG/M
3300005434\|Ga0070709_10528728	All Organisms → cellular organisms → Bacteria → Acidobacteria	899	Open in IMG/M
3300005536\|Ga0070697_100598950	All Organisms → cellular organisms → Bacteria → Acidobacteria	969	Open in IMG/M
3300005538\|Ga0070731_10829027	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300005576\|Ga0066708_10620728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300005591\|Ga0070761_10659264	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300005712\|Ga0070764_10085287	All Organisms → cellular organisms → Bacteria	1668	Open in IMG/M
3300005764\|Ga0066903_103484970	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300005950\|Ga0066787_10164405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300006102\|Ga0075015_100161001	All Organisms → cellular organisms → Bacteria → Acidobacteria	1174	Open in IMG/M
3300006162\|Ga0075030_100847255	All Organisms → cellular organisms → Bacteria → Acidobacteria	721	Open in IMG/M
3300006162\|Ga0075030_101194467	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300006163\|Ga0070715_10825828	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300006174\|Ga0075014_100413946	All Organisms → cellular organisms → Bacteria → Acidobacteria	738	Open in IMG/M
3300006176\|Ga0070765_101079696	Not Available	758	Open in IMG/M
3300009012\|Ga0066710_101795240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300009137\|Ga0066709_103112483	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300009524\|Ga0116225_1056739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1872	Open in IMG/M
3300009525\|Ga0116220_10277349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300009623\|Ga0116133_1129460	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300009628\|Ga0116125_1045096	All Organisms → cellular organisms → Bacteria → Acidobacteria	1116	Open in IMG/M
3300009643\|Ga0116110_1099629	All Organisms → cellular organisms → Bacteria → Acidobacteria	989	Open in IMG/M
3300009700\|Ga0116217_10232674	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	1201	Open in IMG/M
3300009824\|Ga0116219_10668663	All Organisms → cellular organisms → Bacteria → Acidobacteria	569	Open in IMG/M
3300010401\|Ga0134121_13170073	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300011269\|Ga0137392_11587561	Not Available	513	Open in IMG/M
3300012004\|Ga0120134_1028962	All Organisms → cellular organisms → Bacteria → Acidobacteria	910	Open in IMG/M
3300012208\|Ga0137376_11729459	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300012211\|Ga0137377_10948135	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300012349\|Ga0137387_10283380	All Organisms → cellular organisms → Bacteria → Acidobacteria	1197	Open in IMG/M
3300012924\|Ga0137413_10814949	All Organisms → cellular organisms → Bacteria → Acidobacteria	718	Open in IMG/M
3300013503\|Ga0120127_10179512	Not Available	518	Open in IMG/M
3300014156\|Ga0181518_10239183	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	927	Open in IMG/M
3300014158\|Ga0181521_10572851	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300014159\|Ga0181530_10286995	All Organisms → cellular organisms → Bacteria → Acidobacteria	868	Open in IMG/M
3300014160\|Ga0181517_10529618	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
3300014160\|Ga0181517_10644004	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300014161\|Ga0181529_10032549	All Organisms → cellular organisms → Bacteria → Acidobacteria	3972	Open in IMG/M
3300014164\|Ga0181532_10182314	Not Available	1242	Open in IMG/M
3300014165\|Ga0181523_10535869	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	645	Open in IMG/M
3300014165\|Ga0181523_10824358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300014167\|Ga0181528_10528509	All Organisms → cellular organisms → Bacteria → Acidobacteria	650	Open in IMG/M
3300014169\|Ga0181531_10957746	Not Available	537	Open in IMG/M
3300014199\|Ga0181535_10093754	All Organisms → cellular organisms → Bacteria → Acidobacteria	1945	Open in IMG/M
3300014200\|Ga0181526_10172534	All Organisms → cellular organisms → Bacteria → Acidobacteria	1386	Open in IMG/M
3300014201\|Ga0181537_10677373	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300014492\|Ga0182013_10297451	All Organisms → cellular organisms → Bacteria → Acidobacteria	907	Open in IMG/M
3300014654\|Ga0181525_10507216	All Organisms → cellular organisms → Bacteria → Acidobacteria	668	Open in IMG/M
3300014838\|Ga0182030_11251080	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300015242\|Ga0137412_10285506	All Organisms → cellular organisms → Bacteria → Acidobacteria	1298	Open in IMG/M
3300016371\|Ga0182034_11134562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300017935\|Ga0187848_10406952	Not Available	560	Open in IMG/M
3300018012\|Ga0187810_10249413	All Organisms → cellular organisms → Bacteria → Acidobacteria	728	Open in IMG/M
3300018014\|Ga0187860_1280921	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300018033\|Ga0187867_10091733	All Organisms → cellular organisms → Bacteria → Acidobacteria	1776	Open in IMG/M
3300018038\|Ga0187855_10183234	All Organisms → cellular organisms → Bacteria → Acidobacteria	1240	Open in IMG/M
3300018043\|Ga0187887_10194699	All Organisms → cellular organisms → Bacteria → Acidobacteria	1206	Open in IMG/M
3300018047\|Ga0187859_10106621	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300018057\|Ga0187858_10876365	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300018085\|Ga0187772_10680896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300018088\|Ga0187771_11043018	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300020579\|Ga0210407_11146975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300020583\|Ga0210401_10762306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300021088\|Ga0210404_10471228	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300021171\|Ga0210405_11387628	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300021181\|Ga0210388_11286262	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300021403\|Ga0210397_11180408	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300021404\|Ga0210389_11167720	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300021420\|Ga0210394_11365678	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300021476\|Ga0187846_10337454	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300021559\|Ga0210409_11610405	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300021861\|Ga0213853_11585289	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300022557\|Ga0212123_10060629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3353	Open in IMG/M
3300024290\|Ga0247667_1070959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300025406\|Ga0208035_1065609	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300025916\|Ga0207663_10565407	All Organisms → cellular organisms → Bacteria → Acidobacteria	890	Open in IMG/M
3300025942\|Ga0207689_10959709	All Organisms → cellular organisms → Bacteria → Acidobacteria	721	Open in IMG/M
3300027173\|Ga0208097_1025767	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300027497\|Ga0208199_1022046	All Organisms → cellular organisms → Bacteria → Acidobacteria	1421	Open in IMG/M
3300027853\|Ga0209274_10431775	All Organisms → cellular organisms → Bacteria → Acidobacteria	681	Open in IMG/M
3300027879\|Ga0209169_10508044	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300027911\|Ga0209698_11155238	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300028798\|Ga0302222_10295977	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300029636\|Ga0222749_10160448	All Organisms → cellular organisms → Bacteria → Acidobacteria	1101	Open in IMG/M
3300029636\|Ga0222749_10169586	All Organisms → cellular organisms → Bacteria → Acidobacteria	1074	Open in IMG/M
3300029882\|Ga0311368_10089301	Not Available	2662	Open in IMG/M
3300029882\|Ga0311368_10357578	All Organisms → cellular organisms → Bacteria → Acidobacteria	1087	Open in IMG/M
3300029910\|Ga0311369_10421589	All Organisms → cellular organisms → Bacteria → Acidobacteria	1153	Open in IMG/M
3300029944\|Ga0311352_10359936	All Organisms → cellular organisms → Bacteria → Acidobacteria	1199	Open in IMG/M
3300029944\|Ga0311352_11520745	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300030007\|Ga0311338_10825465	All Organisms → cellular organisms → Bacteria → Acidobacteria	920	Open in IMG/M
3300030007\|Ga0311338_11703156	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300030020\|Ga0311344_11367040	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300030042\|Ga0302300_1200221	Not Available	559	Open in IMG/M
3300030054\|Ga0302182_10038812	All Organisms → cellular organisms → Bacteria → Acidobacteria	2170	Open in IMG/M
3300030399\|Ga0311353_10231141	All Organisms → cellular organisms → Bacteria → Acidobacteria	1723	Open in IMG/M
3300030617\|Ga0311356_10402109	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300030862\|Ga0265753_1125289	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300030879\|Ga0265765_1027370	All Organisms → cellular organisms → Bacteria → Acidobacteria	714	Open in IMG/M
3300031234\|Ga0302325_10266802	All Organisms → cellular organisms → Bacteria → Acidobacteria	2826	Open in IMG/M
3300031234\|Ga0302325_10639633	All Organisms → cellular organisms → Bacteria	1552	Open in IMG/M
3300031236\|Ga0302324_101605125	All Organisms → cellular organisms → Bacteria → Acidobacteria	838	Open in IMG/M
3300031242\|Ga0265329_10215193	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300031525\|Ga0302326_11419020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	936	Open in IMG/M
3300032261\|Ga0306920_101370583	All Organisms → cellular organisms → Bacteria → Acidobacteria	1015	Open in IMG/M
3300032805\|Ga0335078_11410296	All Organisms → cellular organisms → Bacteria → Acidobacteria	786	Open in IMG/M
3300032892\|Ga0335081_10892963	All Organisms → cellular organisms → Bacteria → Acidobacteria	1049	Open in IMG/M
3300032892\|Ga0335081_10996187	All Organisms → cellular organisms → Bacteria → Acidobacteria	977	Open in IMG/M
3300032892\|Ga0335081_11488053	All Organisms → cellular organisms → Bacteria → Acidobacteria	751	Open in IMG/M
3300033158\|Ga0335077_10451075	All Organisms → cellular organisms → Bacteria → Acidobacteria	1370	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.69%
Host-Associated	Host-Associated	2.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.15%
Aquatic	Environmental → Aquatic	31.54%
Plants	Host-Associated → Plants	2.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.69%
Freshwater	Environmental → Aquatic → Freshwater	26.92%
Peat	Environmental → Terrestrial → Peat	17.69%
Sediment	Environmental → Aquatic → Sediment	3.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.54%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.77%
Cave	Environmental → Terrestrial → Cave	0.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	26.15%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	17.69%
Loam	Environmental → Terrestrial → Soil → Loam	10.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.77%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.77%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.77%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	21.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	17.69%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.15%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.31%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.31%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.54%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.77%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.77%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.77%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	13.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	11.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.77%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	10.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.62%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.62%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.85%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.54%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.54%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.54%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.54%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.54%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.77%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.77%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.77%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300025406	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10 (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030042	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_1	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030879	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031242	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG	Host-Associated	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_100979974	3300001593	Forest Soil	EALEAGLGTNERMDLDGIRSTAEPVGVNIHAHGD*
JGI12635J15846_104700032	3300001593	Forest Soil	VGQVWRAEDHEALLRTMRAADELTLALVALARRKALEAGLGTNERMDLDGIRSTTEPVGVNIHAHGD*
Ga0070709_105287281	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	ALLRTMRAADELTLALVALARRKALEAGLGTNERVDLDGIRSTAEPVGVNIHAHGD*
Ga0070697_1005989501	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VSADRVGQVWRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGANIHAHGD*
Ga0070731_108290271	3300005538	Surface Soil	WRAEDHEALLRTMRAADELTLALVALARREALEAGLATNERMNLDGIRSTTEPVGANIHASGD*
Ga0066708_106207282	3300005576	Soil	AEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTESVGVNVHAHGD*
Ga0070761_106592642	3300005591	Soil	RVGQVWRAEDHEALLRTMRAADELTLALVALARREALEAGLATNERMNLDGIRSTTEPVGANIHASGD*
Ga0070764_100852873	3300005712	Soil	QVWRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTAEPVGVNIHAHGD*
Ga0066903_1034849702	3300005764	Tropical Forest Soil	VWRAEDHEALLRTMRAADELTLALVALARREALEAGLGANERMDLDGIRSTTEPVGASVRAHGD*
Ga0066787_101644052	3300005950	Soil	DELTLALVALARREALEAGLGTNERVDLDGIRSTAEPVGVNIHAHGD*
Ga0075015_1001610014	3300006102	Watersheds	VWRAEDHEALLRTMRAADELTLALVALARREALEAGLATNERMNLDGIRSTTEPVGANIHASGD*
Ga0075030_1008472551	3300006162	Watersheds	GDVSADRVGQVWRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGADIHAHGD*
Ga0075030_1011944671	3300006162	Watersheds	RVGQVWRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGVNIHAHCD*
Ga0070715_108258281	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	RVGQVWRAEDHEALLRTIRAADELTLALVALARRKALEAGLGTNERMDLDGIRSTTEPVGANIHAHGD*
Ga0075014_1004139462	3300006174	Watersheds	REALEAGLGTNERMDLDGIRSTTEPVGVNIHAHCD*
Ga0070765_1010796962	3300006176	Soil	GQVWRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTAEPVGVNIHAHGD*
Ga0070765_1011328951	3300006176	Soil	HEALLRTMRAADELSLALVALARRESLEAGVNEKERTDGHGVQSKTEPVGIDVSAGGD*
Ga0066710_1017952402	3300009012	Grasslands Soil	HEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGVNIHAHGD
Ga0066709_1031124831	3300009137	Grasslands Soil	EALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGVNIHAHGD*
Ga0116225_10567394	3300009524	Peatlands Soil	MRAADELTHALVALARREALEAGLGTNERVDLDGIRSTAEPVGVNIHAHGD*
Ga0116220_102773491	3300009525	Peatlands Soil	ADRVGQVWRAEDHEALLRTMRAADELTHALVALARREALEAGLGTNERVDLDGIRSTAEPVGVNIHAHGD*
Ga0116133_11294601	3300009623	Peatland	HEALLRTMRAADELTLALVALARRKALEAGLGTNERVDLDGIRSTAEPVGVNIHAHGD*
Ga0116125_10450961	3300009628	Peatland	ALLRTMRAADELTLALVALARREALEAGLGRNERMDLDGIRSTTEPVGVNIHAHGD*
Ga0116129_10376561	3300009633	Peatland	DHEALLRTMRAADELTLALVALARRESLETCVKDKERTDGHGVRSKTEPVGVDVHAGGD*
Ga0116110_10996292	3300009643	Peatland	MRAADELTLALVALARREALEAGLGTNERMDLDGIRSTAEPVGVNIHAHGD*
Ga0116217_102326744	3300009700	Peatlands Soil	MRAADELTLALVALARREALEAGLGTNERVDLDGIRSTAEPVGVNIHAHGD*
Ga0116219_106686632	3300009824	Peatlands Soil	AADELTLALVALARREALEAGLGTNERMDLDGIRPTTEPAGVNIHAHAD*
Ga0134121_131700731	3300010401	Terrestrial Soil	RAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGVSLHAHSD*
Ga0137392_115875612	3300011269	Vadose Zone Soil	MRAVDELTLALVALARREALEAGLGTNERMDPDGIRSTAEPVGVNI
Ga0120134_10289622	3300012004	Permafrost	VWRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTAEPVGVNIHAHGD*
Ga0137376_117294591	3300012208	Vadose Zone Soil	MRAADELTLALVALARREALEAGLETNERMDLDGIRSTTEPVGVNLHAHGD*
Ga0137377_109481351	3300012211	Vadose Zone Soil	EDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGVNLHAHGD
Ga0137387_102833801	3300012349	Vadose Zone Soil	MRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGVNIHAHGD*
Ga0137413_108149492	3300012924	Vadose Zone Soil	MRAADELTLALVALARREALEAGLGRNERMDLDGIRSTTEPVGVNIHAHGD*
Ga0120127_101795122	3300013503	Permafrost	ADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGVNIHAHGD*
Ga0181518_102391833	3300014156	Bog	MRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGVN
Ga0181521_105728512	3300014158	Bog	TLALVALARREALEAGLGTNERMDLDGIRSTTEPVGVNIHAHGD*
Ga0181530_102869951	3300014159	Bog	MRAADELTLALVALARRDALEAGLGTNERMDLDGIRSTAEPVGVNIHAHGD*
Ga0181517_105296181	3300014160	Bog	LTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGVNVHAHGD*
Ga0181517_106440042	3300014160	Bog	ALVALARREALEAGLGTNERMDLDGIRSTTEPVGVNLHAHGD*
Ga0181529_100325495	3300014161	Bog	MRAADELTLALIALARREALEAGLGTNGRMDLDGIRSTAEPVGVNIHAHGD*
Ga0181532_101823141	3300014164	Bog	ALVALARREALEAGLGTNERMDLDGIRSTAEPVGVNIHAHGD*
Ga0181523_105358692	3300014165	Bog	MRAADELTLALVAVARREALEAGLGTNERMDLDGIRSTAEPV
Ga0181523_108243582	3300014165	Bog	AADELTLALVALARREALEAGLGTNERVDLDGIRSTAEPVGVNIHAHGD*
Ga0181528_105285091	3300014167	Bog	VWRAEDHEALLRTMRAADELTLALVALARREALEACLGTNERIDLDGIRSTTEPVGANLHAHGD*
Ga0181531_109577462	3300014169	Bog	QVWRAEDHEALLRTMRAADELTLALVALARREALETGLGTNERMDLDGIRSTTEPVGVNIHAHGD*
Ga0181535_100937542	3300014199	Bog	MRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGVNVHAHGD*
Ga0181526_101725341	3300014200	Bog	HEALLRTMRAADELTLALVALARREALEAGLATNERMNLDGIRATTEPVGANIHASGD*
Ga0181537_106773731	3300014201	Bog	VSADRVGQVWRAEDHEALLRTMRAADELTLALVALARREALEVGLGTNERMDLDGIRSTTEPVGINIHAHGD*
Ga0182013_102974512	3300014492	Bog	MRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGVNIHAHCD*
Ga0181525_105072162	3300014654	Bog	WRAEDHEALLRTMRAADELTLALVALARRKALEAGLGTTERMDLDGMGSTTEPVGVDLHAHGD*
Ga0182030_112510801	3300014838	Bog	AEDHEALLRTMRAADELTLALVALARREALEAGLGTNERVDLDGIRSTAESVGVNIHAHGD*
Ga0137412_102855064	3300015242	Vadose Zone Soil	DVSADRVGQVWRAEDHEALLRTMRAADELTLALVALARREALEAGLGRNERMDLDGIRSTTEPVGVNIHAHGD*
Ga0182034_111345622	3300016371	Soil	IGKVWRAEDHEALLWTMRAADDLTLALVALARREALDTVPQMNERKDLDGIRSTTEPVGASVRAHGD
Ga0187848_104069521	3300017935	Peatland	RREALEAGLGTNERMDLDGIRSTTEPVGVNIHAHGD
Ga0187810_102494132	3300018012	Freshwater Sediment	VSADRVGQVWRAEDHEALLRTMRAADELTLALVALARRKALEAGLGTNERMDLDGIRSTTEPVGANIHAHGD
Ga0187860_10897153	3300018014	Peatland	GGVSAERVGQLWRAGDHEALLRTMHAADELTLALVALARRESLETAVNDKERTDGYGVRSKTEPMGVDVHAGGD
Ga0187860_12809212	3300018014	Peatland	GHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTAEPVGVNIHAHGD
Ga0187866_12688421	3300018015	Peatland	SAERVGQLWRSEDHEALLRTMNAADELTLALVALARRESLDTGVNDKERTDGHGVRSKTEPVGIDVHAGGD
Ga0187872_102423452	3300018017	Peatland	VSAARVGQLWRAEDHEALLRTMHAADELTLALVALARRESLEPGMNDKERTDGHGDRSKTEPMGVDVHAGGD
Ga0187869_106230662	3300018030	Peatland	EDHEALLRTMRAADELTLALVALARRESLEAMNDKERTDGYGVRSKTEPVGVDVHTSGD
Ga0187867_100917331	3300018033	Peatland	AEDHEALLRTMRAADELTLALVALARREALEAGLGTNERVDLDGIRSTAEPVGVNIHAHG
Ga0187867_107168172	3300018033	Peatland	VGQLWRAEDHEALLRTMRAADELTLALVALARRESLETGVNDKERTDGHGVRSKTEPVGVDVHAGGD
Ga0187855_101832341	3300018038	Peatland	IGDVSADRVGQVWRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGANIHAHGD
Ga0187887_101946991	3300018043	Peatland	DRVGQVWRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNDRMDLDGIRSTAEQVGVNIHAHGD
Ga0187890_104173301	3300018044	Peatland	TMQAADELTLALVALARRESLDAGVNDKERTDGHGVRSKTEPVGIDVHAGGD
Ga0187859_101066213	3300018047	Peatland	SADRVGRVWRAEDHEALLRTMRAADELTLALVALARRDALEAGLGTNERMDLDGIRSTTEPVGANLHAHSD
Ga0187858_108763651	3300018057	Peatland	MRAADELTLALVALARREALEAGLGTNERMDLDGIRSTAEPVGVNIHAHGD
Ga0187772_106808962	3300018085	Tropical Peatland	EDHEALLRTMRAADELTLALIAIARRECLEAGVNNKERTNDHGVRSTTEPVGVDVSAGGD
Ga0187771_110430182	3300018088	Tropical Peatland	EDHEALLWTMRAADDLTLALVALARREALDTVSQMNEREHLDGIRSTTEPVGPSVRAHGD
Ga0210407_111469751	3300020579	Soil	MRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGVNLHARGD
Ga0210401_107623062	3300020583	Soil	RVGQLWRAEDHEALLRTMRAADELTLALVALARRESLETRVNDKERTDDHGIRSTTEPVGVDVSAGGD
Ga0210404_104712281	3300021088	Soil	VSADRIEQVWRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERVDLDGIRSTAEPVGVNIHAHGD
Ga0210405_113876281	3300021171	Soil	QVWRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTAEPVGVNIHAHGD
Ga0210388_112862621	3300021181	Soil	LVALARREALEAGLGRNERTDLDGIRSTTEPVGVNIHAHGD
Ga0210397_111804081	3300021403	Soil	SADRVGQVWRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMNLDGIRSTAESLGVDIHAHAD
Ga0210389_111677202	3300021404	Soil	VALARREALEAGLGTDERMDLDGIRSTAEPVGVNIRAHGD
Ga0210394_113656781	3300021420	Soil	WIGDVSADRVGQVWRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGVNIHAHCD
Ga0210394_117535621	3300021420	Soil	EALLRTMCAADELTLALVALARRESLETRVNDKERTDDHGIRSTTEPVGVDVSAGGD
Ga0213871_102397952	3300021441	Rhizosphere	AELVGQLWRAEDHEALLRTMRAADELTLALIAIARRESLEAGVNNKERTDDHGVRSTTEPVGVDVSAGGD
Ga0187846_103374541	3300021476	Biofilm	VALARREALEAGLATNERMNLDGVRSTTEQVGANIHANGD
Ga0210398_102950291	3300021477	Soil	RTMRAADELTLALVALARREVLEARSQIDERKERHGIESTTEPVGVDVHTDGD
Ga0210409_116104052	3300021559	Soil	MRAADELTLALVALARREALEAGLGTNERMDPDGIRSTAEPVGVNIHAHGD
Ga0213853_115852891	3300021861	Watersheds	AEDHEALLRTMRAADELTLALVALARREALEAGLGTNERVDLDGIRSTTEPVGVNIHAHG
Ga0212123_1006062910	3300022557	Iron-Sulfur Acid Spring	RTMRAADELTLALVALARREALEAGLGKNERMDLDGIRSTTEPVGVNIHAHGD
Ga0247667_10709591	3300024290	Soil	RVGQVWRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGVNLHAHGD
Ga0208035_10656091	3300025406	Peatland	DVSADRVGQVWRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTAEPVGVNIHAHGD
Ga0207663_105654073	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	EALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGANIHAHGD
Ga0207689_109597091	3300025942	Miscanthus Rhizosphere	WRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGANIHAHGD
Ga0208097_10257672	3300027173	Forest Soil	GDVSADRVGQVWRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERVDLDGIRSTAEPVGVNIPAHGD
Ga0208199_10220463	3300027497	Peatlands Soil	LLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGVNIHAHGD
Ga0209274_104317751	3300027853	Soil	DELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGVNIHAHGD
Ga0209167_104936552	3300027867	Surface Soil	DVSAERVGHEWRTEDHEAILRAMRAADELTFALVARARGDASETSLNSRERNDLHGIRSKTEPVGADVHAGGD
Ga0209169_105080441	3300027879	Soil	AADELTLALVALARREALEAGLGTNERMDLDGIRSTAEPVGVNIHAHGD
Ga0209698_111552382	3300027911	Watersheds	WRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGVNIHAHCD
Ga0302144_101215622	3300028560	Bog	RAEDHEALLRTMHAADELTLALVALARREFLEPSMNDKERTDGHGVRSETEPLGVDVHAGGD
Ga0302202_104811612	3300028762	Bog	VSAERVGQLWRSEDHEALLRTMHAADELTLALVALARRESLETGMNDKERTDGHGIRSETEPLGVDVHAGGD
Ga0302198_102731322	3300028765	Bog	ERVGQEWRTEDHEALLRAMRAADELTFALVARARGDASETSLNSRERNDVHGIRSKTEPVGADVHAGGD
Ga0302222_102959771	3300028798	Palsa	VWRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERVDLDGIRSTAEPVGVNIHAHGD
Ga0302218_102561121	3300028863	Palsa	GDVSAERVGRLWRAEDHEALLRTMRAADELTLALVALARRESLETGVNDKERTDGHGVRSKTEPVGVDVHAVGD
Ga0222749_101604483	3300029636	Soil	WRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERVDLDGIRSTAEPVGVNIHAHGD
Ga0222749_101695863	3300029636	Soil	WRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTAEPVGVNIPAHGD
Ga0311368_100893015	3300029882	Palsa	TMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTAEPVGVNIHAHGD
Ga0311368_103575783	3300029882	Palsa	TMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGVNIHAHGD
Ga0311369_104215891	3300029910	Palsa	AEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTAEPVGVNIHAHG
Ga0311352_103599361	3300029944	Palsa	RREALEAGLGTNERMDLDGIRSTAEPVGVNIHAHGD
Ga0311352_115207452	3300029944	Palsa	VWRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGANVHASGD
Ga0311338_108254651	3300030007	Palsa	VGQVWRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGVNIHAHGD
Ga0311338_117031561	3300030007	Palsa	DVSADRVGQVWRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGINIHAHGD
Ga0311344_113670402	3300030020	Bog	LLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTAEPVGVNIHAHGD
Ga0302300_12002212	3300030042	Palsa	LTLALVALARREALEAGLGTNERMDLDGIRSTAEPVGVNIHAHGD
Ga0302182_100388123	3300030054	Palsa	VSADRVGQVWRAEDHEALLRTMRAADEFTLALVALARREALEAGLGTNERMDLDGIRSTAEPVGVNIHAHGD
Ga0311353_102311415	3300030399	Palsa	IGDVSADRVGQVWRAEDHEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGANVHASGD
Ga0311356_104021093	3300030617	Palsa	ALARREALEAGLGTNERMDLDGIRSTAEPVGVNIHAHGD
Ga0265753_11252891	3300030862	Soil	DELTLALVALARREALEAGLGTNERMDPDGIRSTAEPVGVNVHAHGD
Ga0265765_10273701	3300030879	Soil	ADRVGQVWRAEDHEALLRTMRAADELTLALIALARREALEAGLGTNERMDLDGIRSTTEPVGVNLHAHGD
Ga0302325_102668026	3300031234	Palsa	HEALLRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTAEPVGVNIHAHGD
Ga0302325_106396333	3300031234	Palsa	TLALVALARREALEAGLGRNERMDLDGIRSTTEPVGVNIPAHGD
Ga0302324_1016051252	3300031236	Palsa	EALLRAMRAADELTLALLALARREALETTLQIDERKARHGIGSTTEPVGADIHTHGG
Ga0302324_1022266361	3300031236	Palsa	VEDHEALLRTMRAADELTLALVAIARRESLETRVNDKERTDDHGIRSTTEPVGVDVSAGG
Ga0265329_102151932	3300031242	Rhizosphere	WRVEDHEALLRTMRAADELTLALVALARREALEAGLGTNERVDLDGIRSTAEPVGVNIHAHGD
Ga0302320_120591712	3300031524	Bog	QMWRAEDHEALLRAMRAADELTLALVALARRESLEGVNENERTDGHGFRTKAESVGVDFSAGGD
Ga0302326_114190203	3300031525	Palsa	AEDHEALLRTMRAADELTLALVALARREALEAGLATNERMNLDGIRSTTEPLGANIHASG
Ga0306920_1013705831	3300032261	Soil	LTLALVALARREALDTVPQMNERKDLDGIRSTTEPVGASVRAHGD
Ga0335078_114102961	3300032805	Soil	ALVALARREALEAGLATNERMNLDGIRSTTEPVGVNIHASGD
Ga0335081_108929632	3300032892	Soil	AADELTLALVALARREAREARLATNERTNLDGIRSTTEPVGANIHASGD
Ga0335081_109961871	3300032892	Soil	AEDHEALLRTMRAADELTLALVALARREALEAGLGTNERVDLDGIRSTTEPVGVNIRAHG
Ga0335081_114880531	3300032892	Soil	TLALVALARREGLEAGLGPNERMDLDGVRSTTEPVGVNVHAHGD
Ga0335071_121406062	3300032897	Soil	SAERVGQQWRAEDHEALLRTMRAADELTLALIAIARRESLEAGVNKKERTDDHGVRSTTEPVGVDVSAGGD
Ga0335077_104510751	3300033158	Soil	LRTMRAADELTLALVALARREALEAGLGTNERMDLDGIRSTTEPVGANLHAHSD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063105

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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