Metagenome Family F063114

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063114
Family Type	Metagenome
Number of Sequences	130
Average Sequence Length	62 residues
Representative Sequence	MMDSSREALKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVARLSQQTE
Number of Associated Samples	112
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.53 %
% of genes near scaffold ends (potentially truncated)	97.69 %
% of genes from short scaffolds (< 2000 bps)	83.85 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.462 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.077 % of family members)
Environment Ontology (ENVO)	Unclassified (30.769 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.692 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.31% β-sheet: 0.00% Coil/Unstructured: 52.69%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF13620	CarboxypepD_reg	3.08
PF02517	Rce1-like	3.08
PF13561	adh_short_C2	2.31
PF00903	Glyoxalase	2.31
PF00072	Response_reg	1.54
PF13432	TPR_16	1.54
PF02065	Melibiase	1.54
PF07228	SpoIIE	1.54
PF12704	MacB_PCD	1.54
PF08240	ADH_N	1.54
PF00239	Resolvase	0.77
PF13787	HXXEE	0.77
PF01551	Peptidase_M23	0.77
PF00324	AA_permease	0.77
PF13428	TPR_14	0.77
PF02321	OEP	0.77
PF00691	OmpA	0.77
PF13964	Kelch_6	0.77
PF00881	Nitroreductase	0.77
PF04116	FA_hydroxylase	0.77
PF08734	GYD	0.77
PF11185	DUF2971	0.77
PF00326	Peptidase_S9	0.77
PF00515	TPR_1	0.77
PF11954	DUF3471	0.77
PF00106	adh_short	0.77
PF07617	DUF1579	0.77
PF14437	MafB19-deam	0.77
PF01177	Asp_Glu_race	0.77
PF03551	PadR	0.77
PF01979	Amidohydro_1	0.77
PF01569	PAP2	0.77
PF00155	Aminotran_1_2	0.77
PF03167	UDG	0.77
PF13602	ADH_zinc_N_2	0.77
PF02371	Transposase_20	0.77
PF00392	GntR	0.77
PF14559	TPR_19	0.77
PF02661	Fic	0.77
PF00589	Phage_integrase	0.77
PF13372	Alginate_exp	0.77
PF01011	PQQ	0.77
PF13460	NAD_binding_10	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	3.08
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	3.08
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.54
COG3345	Alpha-galactosidase	Carbohydrate transport and metabolism [G]	1.54
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.77
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.77
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	0.77
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	0.77
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	0.77
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.77
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.77
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.77
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.77
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.77
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.77
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.77
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.77
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.77
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.46 %
Unclassified	root	N/A	11.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.46 %
Unclassified	root	N/A	11.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.46 %
Unclassified	root	N/A	11.54 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	61.54 %
Unclassified	root	N/A	11.54 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.08 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.77 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.77 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	43.08 %
Unclassified	root	N/A	11.54 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.00 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.08 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.77 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.08 %
Unclassified	root	N/A	11.54 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	10.00 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	3.08 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.77 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.08 %
Unclassified	root	N/A	11.54 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10.00 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.08 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.08 %
Unclassified	root	N/A	11.54 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.08 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.31 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	1.54 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.08 %
Unclassified	root	N/A	11.54 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.08 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1.54 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.54 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.08 %
Unclassified	root	N/A	11.54 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.08 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1.54 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	0.77 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10723938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300002908\|JGI25382J43887_10476915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300003505\|JGIcombinedJ51221_10162231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	904	Open in IMG/M
3300004479\|Ga0062595_101978141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300005093\|Ga0062594_101980277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300005171\|Ga0066677_10247802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1010	Open in IMG/M
3300005171\|Ga0066677_10445165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	741	Open in IMG/M
3300005171\|Ga0066677_10677363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300005447\|Ga0066689_10129311	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1482	Open in IMG/M
3300005454\|Ga0066687_10754683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300005536\|Ga0070697_101648619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300005542\|Ga0070732_10385379	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	845	Open in IMG/M
3300005548\|Ga0070665_101047020	Not Available	828	Open in IMG/M
3300005554\|Ga0066661_10352313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	901	Open in IMG/M
3300005568\|Ga0066703_10550218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300005569\|Ga0066705_10454930	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	802	Open in IMG/M
3300005578\|Ga0068854_100287870	All Organisms → cellular organisms → Bacteria → Acidobacteria	1325	Open in IMG/M
3300005602\|Ga0070762_10295252	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300005718\|Ga0068866_10067042	All Organisms → cellular organisms → Bacteria	1883	Open in IMG/M
3300005764\|Ga0066903_107745664	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005841\|Ga0068863_100491684	Not Available	1207	Open in IMG/M
3300006028\|Ga0070717_11224981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300006032\|Ga0066696_10837241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300006050\|Ga0075028_100771785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300006163\|Ga0070715_10438492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300006175\|Ga0070712_101891211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300006358\|Ga0068871_100154437	All Organisms → cellular organisms → Bacteria → Acidobacteria	1959	Open in IMG/M
3300006954\|Ga0079219_12219175	Not Available	529	Open in IMG/M
3300009012\|Ga0066710_100461237	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1907	Open in IMG/M
3300009089\|Ga0099828_10927636	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300009089\|Ga0099828_11856809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300009090\|Ga0099827_10687853	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300009101\|Ga0105247_10560689	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300009177\|Ga0105248_11377423	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300009177\|Ga0105248_12572738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300009545\|Ga0105237_10449290	Not Available	1295	Open in IMG/M
3300009784\|Ga0123357_10908566	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300010358\|Ga0126370_11681087	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300010360\|Ga0126372_12562672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	561	Open in IMG/M
3300010371\|Ga0134125_10670282	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300010376\|Ga0126381_100656596	Not Available	1497	Open in IMG/M
3300010376\|Ga0126381_102744909	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	703	Open in IMG/M
3300010396\|Ga0134126_10662848	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300010397\|Ga0134124_10281214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1543	Open in IMG/M
3300011269\|Ga0137392_11540367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300012200\|Ga0137382_10049925	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2609	Open in IMG/M
3300012208\|Ga0137376_10267085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	1484	Open in IMG/M
3300012208\|Ga0137376_10297242	All Organisms → cellular organisms → Bacteria → Acidobacteria	1401	Open in IMG/M
3300012208\|Ga0137376_10428366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1149	Open in IMG/M
3300012285\|Ga0137370_10424528	Not Available	807	Open in IMG/M
3300012357\|Ga0137384_10325889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1275	Open in IMG/M
3300012917\|Ga0137395_10961288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300012925\|Ga0137419_10197259	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1488	Open in IMG/M
3300012929\|Ga0137404_10026675	All Organisms → cellular organisms → Bacteria	4232	Open in IMG/M
3300012960\|Ga0164301_10646910	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	788	Open in IMG/M
3300013102\|Ga0157371_11307877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300013306\|Ga0163162_12227466	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300013306\|Ga0163162_13111369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300013307\|Ga0157372_12538313	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300014501\|Ga0182024_10317718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2050	Open in IMG/M
3300015241\|Ga0137418_10246858	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1517	Open in IMG/M
3300015264\|Ga0137403_10052351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4204	Open in IMG/M
3300015264\|Ga0137403_10369112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1319	Open in IMG/M
3300015371\|Ga0132258_10975784	All Organisms → cellular organisms → Bacteria	2141	Open in IMG/M
3300015372\|Ga0132256_102181772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300016319\|Ga0182033_10549178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	998	Open in IMG/M
3300016422\|Ga0182039_10137853	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1869	Open in IMG/M
3300017928\|Ga0187806_1204192	Not Available	671	Open in IMG/M
3300017936\|Ga0187821_10377810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300017942\|Ga0187808_10045130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1855	Open in IMG/M
3300017943\|Ga0187819_10037777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2855	Open in IMG/M
3300017943\|Ga0187819_10184058	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300017959\|Ga0187779_10522101	Not Available	788	Open in IMG/M
3300018043\|Ga0187887_10007853	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7466	Open in IMG/M
3300018482\|Ga0066669_10585625	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300020006\|Ga0193735_1004719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4381	Open in IMG/M
3300020015\|Ga0193734_1017686	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300020150\|Ga0187768_1000011	All Organisms → cellular organisms → Bacteria	44430	Open in IMG/M
3300020581\|Ga0210399_10132257	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2054	Open in IMG/M
3300020582\|Ga0210395_10077846	All Organisms → cellular organisms → Bacteria → Acidobacteria	2442	Open in IMG/M
3300021170\|Ga0210400_10809657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300021178\|Ga0210408_10202143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1580	Open in IMG/M
3300021178\|Ga0210408_10600509	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300021344\|Ga0193719_10296074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300021403\|Ga0210397_10815803	Not Available	720	Open in IMG/M
3300021403\|Ga0210397_11379616	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300021407\|Ga0210383_10552752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	993	Open in IMG/M
3300021420\|Ga0210394_10130577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2177	Open in IMG/M
3300021420\|Ga0210394_11351157	Not Available	607	Open in IMG/M
3300021433\|Ga0210391_10266155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1345	Open in IMG/M
3300021478\|Ga0210402_11019722	Not Available	754	Open in IMG/M
3300021478\|Ga0210402_11691916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300021479\|Ga0210410_10280838	Not Available	1494	Open in IMG/M
3300021559\|Ga0210409_10027488	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5488	Open in IMG/M
3300025907\|Ga0207645_10064321	All Organisms → cellular organisms → Bacteria	2344	Open in IMG/M
3300025910\|Ga0207684_10993120	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300025913\|Ga0207695_11580580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300025933\|Ga0207706_10584874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	960	Open in IMG/M
3300025986\|Ga0207658_10339676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1305	Open in IMG/M
3300026023\|Ga0207677_11920303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300026538\|Ga0209056_10481720	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300027692\|Ga0209530_1035765	All Organisms → cellular organisms → Bacteria → Acidobacteria	1474	Open in IMG/M
3300027768\|Ga0209772_10084590	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	965	Open in IMG/M
3300027853\|Ga0209274_10339543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300027855\|Ga0209693_10422240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300027869\|Ga0209579_10270250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	914	Open in IMG/M
3300027889\|Ga0209380_10045802	All Organisms → cellular organisms → Bacteria	2480	Open in IMG/M
3300029943\|Ga0311340_11460651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300030520\|Ga0311372_11877913	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300030618\|Ga0311354_10147874	All Organisms → cellular organisms → Bacteria	2567	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10252579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300031231\|Ga0170824_104693921	All Organisms → cellular organisms → Bacteria → Acidobacteria	627	Open in IMG/M
3300031231\|Ga0170824_125248479	Not Available	784	Open in IMG/M
3300031708\|Ga0310686_109044255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300031708\|Ga0310686_114537904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1173	Open in IMG/M
3300031719\|Ga0306917_10141312	All Organisms → cellular organisms → Bacteria → Acidobacteria	1777	Open in IMG/M
3300031720\|Ga0307469_10198685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1563	Open in IMG/M
3300031740\|Ga0307468_101193113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300031740\|Ga0307468_102192135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300031744\|Ga0306918_10921200	Not Available	680	Open in IMG/M
3300031820\|Ga0307473_10259043	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300031823\|Ga0307478_10009953	All Organisms → cellular organisms → Bacteria → Acidobacteria	6520	Open in IMG/M
3300031941\|Ga0310912_11153189	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300031946\|Ga0310910_10652026	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300031954\|Ga0306926_10121382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3222	Open in IMG/M
3300031954\|Ga0306926_10309770	All Organisms → cellular organisms → Bacteria → Acidobacteria	1954	Open in IMG/M
3300031962\|Ga0307479_10011007	All Organisms → cellular organisms → Bacteria	8417	Open in IMG/M
3300032828\|Ga0335080_10035277	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5487	Open in IMG/M
3300033158\|Ga0335077_12070260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.08%
Host-Associated	Host-Associated	16.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.92%
Plants	Host-Associated → Plants	16.15%
Aquatic	Environmental → Aquatic	6.15%
Arthropoda	Host-Associated → Arthropoda	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.23%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.15%
Freshwater	Environmental → Aquatic → Freshwater	5.38%
Peat	Environmental → Terrestrial → Peat	2.31%
Sediment	Environmental → Aquatic → Sediment	0.77%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.77%
Roots	Host-Associated → Plants → Roots	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.69%
Loam	Environmental → Terrestrial → Soil → Loam	12.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.77%
Sand	Environmental → Terrestrial → Soil → Sand	0.77%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.77%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.62%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.08%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.31%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.31%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.77%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.77%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.77%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.08%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.62%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.62%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.08%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.08%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.31%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.31%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.31%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.54%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.54%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.77%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.77%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.77%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.77%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009784	Embiratermes neotenicus P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P4	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_107239381	3300001593	Forest Soil	MGSSREALKPDERGLGDPPAKSQGRLALALGVIAIALSLVLGFVYLTSVRRLEREVA
JGI25382J43887_104769151	3300002908	Grasslands Soil	MDSSREALKPDERGLGDAPAKSRGKLALALGVIAIALSLVLGFVYLISVRRLEREVARLS
JGIcombinedJ51221_101622312	3300003505	Forest Soil	MDSSREALKPDERGLGDAPAKSQGKLALVLGVIAIALSLVLGFVYLISVRRLEREVARLSQQ
Ga0062595_1019781411	3300004479	Soil	MDSSREAPKPDERGLEQAPAKSQEKLALALGVIAIALSLILGFVYLISVRRLEREVARL
Ga0062594_1019802772	3300005093	Soil	MDSSREALKPDEHGPGDAPTKSQGKLALALGMIAIALSLGLGFVYLISVRRLERDVARLNQQTESLSQ
Ga0066677_102478022	3300005171	Soil	MDSSREALKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVTR
Ga0066677_104451652	3300005171	Soil	MDSSREALKPDERGLGDARAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVTR
Ga0066677_106773632	3300005171	Soil	MDSSREALKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLERKVARL
Ga0065712_100953431	3300005290	Miscanthus Rhizosphere	MMDSSREALKPDERGLEDASAKSQVKFALALGVIAIALSLVLGLVSLMSERRL
Ga0066689_101293111	3300005447	Soil	MDSSREALKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVARL
Ga0066687_107546831	3300005454	Soil	MDSSSEALAPDERGLGDAPAKSHGKLALALGVIAIALSLTLGFVYLISVRRLEREVARLSQQTEG
Ga0070697_1016486192	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MDSSREAPKPDERGLEQAPPKSQEKLALALGVIAIALSLILGFVYLISVRRLEREVARLSQQTEGFS
Ga0070732_103853791	3300005542	Surface Soil	MMDSSRGPLKLDERGLGDAPGKSHGKLALALGVIAIALSLILGFVYLRSVRRLEREVA
Ga0070665_1010470201	3300005548	Switchgrass Rhizosphere	MDSSRESTPLDERGPDDLPAKSQGKFALALGVIAIALSLVFGIVYLMSVRRLEREVARLS
Ga0066661_103523132	3300005554	Soil	MMDSSHEALKPDERGLGDARAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVTR
Ga0066703_105502181	3300005568	Soil	MMDSSREALKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVTR
Ga0066705_104549301	3300005569	Soil	MMDSSREALKPDERGLGDARAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVTR
Ga0068854_1002878701	3300005578	Corn Rhizosphere	MIESSREALKPDERGPEDEPAKSQGKLALALGLIAIALSLVLGFVYLIPVRRLEREVA
Ga0070762_102952521	3300005602	Soil	MDSSREALKPDEPGLGDAPAKSQGKIALALGVIAIALSLVLGFVYLISVRRLEREVARLSQQTEGFSRL
Ga0068866_100670422	3300005718	Miscanthus Rhizosphere	MMDSSREALKPDERGLGDAPARSQGKLALALGAIAIALSLVLGFVHLISVHRLEREVARLSQ
Ga0066903_1077456641	3300005764	Tropical Forest Soil	MDSSQLNLDTRGLEDASAKSHGKLALALGVIAIALSLVLGFVYLKSVRRLEGELARLSQQ
Ga0068863_1004916842	3300005841	Switchgrass Rhizosphere	MDTSPEVLKPDERGLGNAPPKSQGKLALALGVIAIVLSLFLGFVYLISVRRLEREVARLSQQTEG
Ga0070717_112249812	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDLSREAPKPDERGLGDASAESQGKLALALGVIAIALSLVLGFVYLISVRRLEREVAQLSQQTEGLS
Ga0066696_108372411	3300006032	Soil	MMDSSREALKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLERKVARL
Ga0075028_1007717851	3300006050	Watersheds	MMDSSREALKPDERGLGDAPTKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVA
Ga0070715_104384923	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MMDSSREALKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVARLSQQTE
Ga0070712_1018912111	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MMDSSREALKPDERGLGDAPAKSQGKLALALGVIAIALSVVLGFVYLISVRRLEREVARLSQQTEGFS
Ga0068871_1001544371	3300006358	Miscanthus Rhizosphere	MIESSREALKPDERGPEDEPAKSQGKLALALGLIAIALSLVLGFVYLISVRRLEREVARLSQQTE
Ga0079219_122191751	3300006954	Agricultural Soil	MDPSRGRLQPDEQVLAAAAAKSQAKFALGLGVIAIALSLGLGIVYQISVRRMEREVSRLSQQTEDL
Ga0066710_1004612371	3300009012	Grasslands Soil	MMDSSREALKPDERGLGDARAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVTRL
Ga0099828_109276362	3300009089	Vadose Zone Soil	MMDSSREALKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVARLSQQTEGFS
Ga0099828_118568091	3300009089	Vadose Zone Soil	MMDSSRVPLKLDERGLGDAPGKSQGKLALALGVIAIALSLVLGFVYLRSVRRLEREVAQ
Ga0099827_106878531	3300009090	Vadose Zone Soil	MMDSSREALKSDERGLGDAPAKSQGKLALALGVIAIALSLVLGSVYLISVRHLEREV
Ga0105247_105606892	3300009101	Switchgrass Rhizosphere	MMDSSREAPKPDERGLEQAPAKSQEKLALALGVIAIALSLILGFVYLISVRRLEREVARLSQQ
Ga0105248_113774231	3300009177	Switchgrass Rhizosphere	MMDTSPEVLKPDERGLGNAPPKSQGKLALALGVIAIVLSLFLGFVYLISVRRLEREVARLSQQTEGLSRT
Ga0105248_125727381	3300009177	Switchgrass Rhizosphere	MMDSSREVPKPDERGLEQAPPKSQEKLALALGVIAIALSLILGFVYLISVRRLEREVARLSQQTEG
Ga0105237_104492901	3300009545	Corn Rhizosphere	MDFSSEARKPDEREPGDAPARSHGKLALALGVIAIALSLVLGAVYIVSVRRWERD
Ga0123357_109085662	3300009784	Termite Gut	MDSSRVPLNPEPLPEDASARSRRKLALALGVIAIALSFVLGFVYLISVRRLEGELA
Ga0126370_116810871	3300010358	Tropical Forest Soil	MMDCSRVQLNPDTRGPEDAAAKSQGKLALAVGVIAIALNLVLGFVYLISFRRLEGELARLSQQTEGLNR
Ga0126372_125626721	3300010360	Tropical Forest Soil	MMHSSREALKLDERGLRDAPAKSQGKLVALGVIAIALSLVLGFVYLISIRLLERDGARLS
Ga0134125_106702822	3300010371	Terrestrial Soil	MMDSSREALKPDERGPGDAPAKSQGKLALALGAIAIALSLVLGFVHLISVHRLEREVARL
Ga0126381_1006565961	3300010376	Tropical Forest Soil	MMEFSHEALPDERGSGGPPATSQEKFALALGVIAIALSLVLGFVYLISVRRLEREVARLSQQTEN
Ga0126381_1027449091	3300010376	Tropical Forest Soil	MDSSRVQLNPDTRGLEDAAAKSQGKLALAVGVIAIALSLVLGFVYLISFRRLEGELARLSQQTEGLNRMV
Ga0134126_106628482	3300010396	Terrestrial Soil	MMDSSREAPKPDERGLEQAPAKSQEKLALALGVIAIALSLILGFVYLISVRRLEREVARLSQ
Ga0134124_102812141	3300010397	Terrestrial Soil	MMDSSREALKPDERGLEDASAKSQVKFALALGVIAIALSLVLGLVSLMSERRLERKMTALSQQTEDFSR
Ga0137392_115403671	3300011269	Vadose Zone Soil	MMDSSREALKPDERGIGDTPAKSQGKLALALGVIAIALSLILGFVYLISVRRLEREVARLSQ
Ga0137382_100499253	3300012200	Vadose Zone Soil	MMDSSREALKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVTRLSQQTE
Ga0137376_102670851	3300012208	Vadose Zone Soil	MMDSSREALKRDERGLGDAPAKSQGKLALSLGVIAIALSLVSGFVYLNSVRRLER
Ga0137376_102972423	3300012208	Vadose Zone Soil	MMDSSREALKPDERRLGDAPAKSQGKLALSLGVIAIALSLVSGFVYLNSVRRLER
Ga0137376_104283662	3300012208	Vadose Zone Soil	MMDSSREALKPDKRGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVTRLSQ
Ga0137370_104245282	3300012285	Vadose Zone Soil	MMDSSREALKPDERGLGDEPAKSQWKLALALGVIAIALSLVLGFVYLISVRRLEREVTRL
Ga0137384_103258891	3300012357	Vadose Zone Soil	MMDSSHEALKPDERGLGDAHAKSQGKLALALGVIAIALSLVLGFVYLISVRRLE
Ga0137395_109612881	3300012917	Vadose Zone Soil	MMDSSREALKPDERGIGDTPAKSQGKLAPALGVVAIALSLVLGFVYLISVRRLEREVERLSPQT
Ga0137419_101972591	3300012925	Vadose Zone Soil	MMDSSSDAPMPHERGLGDAPAKPQGKLALALGVIAIALSLVLGLVYLISVRRLEREVAR
Ga0137404_100266751	3300012929	Vadose Zone Soil	MMDSSREAQKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVARLSQQTEGF
Ga0164301_106469101	3300012960	Soil	MMDSSSEAREPDERGFGDTPAKSQGKLALALGVTAIALCLVSGFVYLNSVRRLEREVARL
Ga0157371_113078771	3300013102	Corn Rhizosphere	MMDSSREALKPDERGLGDAPARSQGKLALALGAIAIALSLVLGFVHLISVHRLEREVARL
Ga0163162_122274662	3300013306	Switchgrass Rhizosphere	MMDTSPEVLKPDERGLGNAPPKSQGKLALALGVIAIVLSLFLGFVYLISVRRLEREVARLSQQTEGLSRTV
Ga0163162_131113691	3300013306	Switchgrass Rhizosphere	MMDSSPEALKPGERGLGDAPAKSQGKLALALGVIAIALSLFLGFVYLISVRRLEREVARLSQQTEGLSR
Ga0157372_125383131	3300013307	Corn Rhizosphere	MMDTSPEVLKPDERGLGNAPPKSQGKLALALGVIAIVLSLFLGFVYLISVRRLEREVARL
Ga0182024_103177182	3300014501	Permafrost	MMDSSREALKPDERGLGDAPVKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVARL
Ga0137418_102468581	3300015241	Vadose Zone Soil	MMDSSSEALRPDERGLGDAPAKPQGKLALALGVIAIALSLVLGFVYLISVRRLEREVARLSQQTEGFSR
Ga0137403_100523514	3300015264	Vadose Zone Soil	MMESSSEALRPDERGLGDAPAKPQGKLALALGVIAIALSLVLGLVYLISVRRLEREVARLSQQTEGFSR
Ga0137403_103691122	3300015264	Vadose Zone Soil	MMDSSREALKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVARLSQQTEGFSR
Ga0132258_109757844	3300015371	Arabidopsis Rhizosphere	MEFSRDALPDERGSGGPAATSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVTRLS
Ga0132256_1021817721	3300015372	Arabidopsis Rhizosphere	MMDSSPEALKPGERGLGDAPAKSQGKLALALGVIAIALSVFLGFVYLISVRRLEREVARLNQQTEDFSRL
Ga0182033_105491781	3300016319	Soil	MGSSREALRPDERGLGDALAKSQGKLALALGMIAIALSLVLGLVFLTSVRRLEREVARLSQRTEGLS
Ga0182039_101378532	3300016422	Soil	MGSSREALRPDERGLGDALAKSQGKLALALGMIAIALSLVLGLVFLTSVRRLEREV
Ga0187806_12041922	3300017928	Freshwater Sediment	MDSSTEVPGPDDRGLGDEPAKSSGTLALALGVIAILLSLVLGFVYLRSARRLERKVAQLSQQT
Ga0187821_103778102	3300017936	Freshwater Sediment	MMDSSREALKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLELEVAWLSQQTEGFSRLVV
Ga0187808_100451301	3300017942	Freshwater Sediment	MDYSTEVPGPDDRGLGDEPAKSSGTLALALGVIAILLSLVLGFVYLRSARRLERKVA
Ga0187819_100377771	3300017943	Freshwater Sediment	MDSSRDLPKPDEGGLGDAPAKSSGKLALALGVIAIALSLVLGFVYLRSVRRLEREVAQLSQQTESFNRLV
Ga0187819_101840581	3300017943	Freshwater Sediment	MMDSSREALKPDERGPGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVAWLSQQTEG
Ga0187779_105221012	3300017959	Tropical Peatland	MTDSSREALKRDERELGDAPAKSQAKLALALGVTAIALSLVLGCVYLMSVRRLEREVARLSRQTEDSSRLVV
Ga0187887_100078531	3300018043	Peatland	MMDSREALNPDERGLGDGPAKSQGKLALALGVIAIALSLVLGLIYLISARRLERE
Ga0066669_105856251	3300018482	Grasslands Soil	MDSSREALKPDERGLGDAPAKSRGKLALALGVIAIALSLVSGFVYLNSVRRLER
Ga0193735_10047191	3300020006	Soil	MIDSSSEALKPDERGLGDAPAKSQGKLALALGVIAITLSLVLGFVYLISVRRLEREVARLSQQTED
Ga0193734_10176862	3300020015	Soil	MIDSSSEALKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVARLSQQTEDFS
Ga0187768_100001150	3300020150	Tropical Peatland	VPLNPDKRALEDASAKSQAKLALALGVIAIALSLVLGFVYLISVRRVEGELARLS
Ga0210399_101322571	3300020581	Soil	MMDSSREALKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVARLSQQTEGLSRLV
Ga0210395_100778461	3300020582	Soil	MMDSSRGALDPDERGPGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLQREVARLSQQT
Ga0210400_108096572	3300021170	Soil	MMDPSREALKPDERGPGDASAKSQGKLALALGVIAIALSLVLGFVYLISVHRLEREVARL
Ga0210408_102021431	3300021178	Soil	MDSSREALKPDERGLGDAPAKSQGKLALVLGVIAIALSLVLGFVYLISVRRLEREVARL
Ga0210408_106005091	3300021178	Soil	MMDSSREALKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLE
Ga0193719_102960742	3300021344	Soil	MDSSREALKPDERGLGDAPAQSRGKLALALGVIAIALSLVLGFVYLISVRRLEREVARLSQHDGR
Ga0210397_108158031	3300021403	Soil	MDSSREALKPDERGLGDARAKSQGNLALALGVIAIALSLVLGFVYLISVRRLEREVARLSQQTVDFS
Ga0210397_113796162	3300021403	Soil	MMDSSREALNPDERGLGDPPARSHGKLALALGVIAIALSLILGVVYLTSVRRLEREVARLSQQTEDFSRVLVS
Ga0210383_105527521	3300021407	Soil	MVDFSREVMNPDERGLGDASAKSRGRLALALGVIAIALSSVLGSVYLISVRRLEREV
Ga0210394_101305771	3300021420	Soil	MDSSREPLTPDERASGDARAKSQGKLALALGAIAIALSLVLGFVYLISVRRLEREVARLSQQTE
Ga0210394_113511571	3300021420	Soil	MDSSREALKPDEHELGDAPSNPQAKLALALGVIAIALNVVLGFVYLVAVRRLEREV
Ga0210391_102661551	3300021433	Soil	MMESSREAPERDERGPGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVARLSQQTEGLSSQVV
Ga0210402_110197222	3300021478	Soil	MGFSPEAPGPDESGLAVAPAKSHGKLALALAAIAIGLSLVLGFLYLRSVRRLEREVTQLSQQTEAFRR
Ga0210402_116919161	3300021478	Soil	MMDSSRETLKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVARLSQ
Ga0210410_102808383	3300021479	Soil	MDSSREALKPDERGLGDARAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVARLS
Ga0210409_100274881	3300021559	Soil	MMDSSREALKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREV
Ga0207645_100643211	3300025907	Miscanthus Rhizosphere	MMDSSPEALKPGERGLGDAPAKSQGKLALALGVIAIALSLFLGFVYLISVRRLEREV
Ga0207684_109931201	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MDSSREALKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLE
Ga0207695_115805802	3300025913	Corn Rhizosphere	MIESSREALKPDERGPGDAPAKSQGKLALALGLIAIALSLVLGFVYLISVRRLEREVARLSQQTEDLS
Ga0207706_105848741	3300025933	Corn Rhizosphere	MDTSPEVLKPDERGLGNAPPKSQGKLALALGVIAIMLSLFLGFVYLISVRRLEREVARLSQQTE
Ga0207658_103396762	3300025986	Switchgrass Rhizosphere	MDSSPEALKPGERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLERE
Ga0207677_119203032	3300026023	Miscanthus Rhizosphere	MDSSRESMTPDESGLADAPAKSQGKFALALGMIAIALSLVFGIVYLVSVRRLDREVARLSEQTEGLSRT
Ga0209056_104817201	3300026538	Soil	MMDSSREALKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVTRLSQ
Ga0209530_10357651	3300027692	Forest Soil	MMDSSREALEPGERGFEGAPGKSQGKLALALGVIAIALSMALGFAYLISVRRLER
Ga0209772_100845901	3300027768	Bog Forest Soil	MMDSSREALKPDERELGAAPARSQGKLALALGVIAIALSMALGFAYLISVRRLERDVARL
Ga0209274_103395431	3300027853	Soil	MDSSREALEPGERGFEGAPGKSQGKLALALGVIAIALSLAPGFAYLISVRRLEREVARISQQTESFSQQL
Ga0209693_104222402	3300027855	Soil	MMDSSREAQKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVA
Ga0209579_102702502	3300027869	Surface Soil	VIDSSRDALKPDERGLGNAPAKSQGKLALALGVIAIALSLVLGLVYLISLRRLEREVTRLSQQTEDFNRV
Ga0209380_100458021	3300027889	Soil	MDSSREPLTPDERASGDARAKSQGKLALALGAIAIALSLVLGFVYLISVRRLEREVARLSQQTEGFSR
Ga0311340_114606511	3300029943	Palsa	MMDSSGQPLQPDERGLGDAPAKSHGKLALALGVIAIALSLVLGFVYLTSVRRLEREVARLSQQTEGFSRLIE
Ga0311372_118779131	3300030520	Palsa	MMDSSGQPLQPDERGLGDAPANSHGKLALALGVIAIALSLVLGFVYLTSVRRLEREVARLSQQT
Ga0311354_101478741	3300030618	Palsa	MMDSSPEALKPDERGLDDPPAKSQGKLALALGVIAIALSLVLGFVYLVSVRRLEREVARLSQQTE
(restricted) Ga0255310_102525792	3300031197	Sandy Soil	MTDSSREALKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEHEVAR
Ga0170824_1046939212	3300031231	Forest Soil	MDSSREALRPDERGFGDAPAKPQGKLALALGVIAIALSLALGSVYLVSVRRLEREVARLSQQTEDFGRQLGRA
Ga0170824_1252484791	3300031231	Forest Soil	MGFSPEAPGPDESGLAVAPAKSHGKLALALAVIAIGLSLVLGFVYLRSARRLEREVAQLSQQTEAFRRLV
Ga0310686_1090442553	3300031708	Soil	MVDSSREAMNPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVA
Ga0310686_1145379041	3300031708	Soil	MMDSSREPLTPDERASGDATAKSQGKLALALGAIAIALSLVPGFVYLISVRRLEREVARLSQQTEDFSRQ
Ga0306917_101413121	3300031719	Soil	MGFSPEAPDPDESGLAVAPGRSHGRLALALGIIAIGLSLVLGFLYLSSVRRLERQVAQLSQESEAFRQLV
Ga0307469_101986851	3300031720	Hardwood Forest Soil	MMDSSREVLKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGCVYLISARRLERE
Ga0307468_1011931132	3300031740	Hardwood Forest Soil	MMDSSREVLKPDERGLGDAPAKSQGKLALALGVIAIALSLVSGFVYLNSVRRLEREVARLSQQTEG
Ga0307468_1021921351	3300031740	Hardwood Forest Soil	MDSSREAPKPDERGLEQAPPKSQEKLALALGVIAIALSLILGFVYLISVRRLEREVARLSQQTEG
Ga0306918_109212002	3300031744	Soil	MDSSPVPLNPNERGLEDASAKSQRKIALALGVIAIALTLVLGFVYLISIRRLEGELARLSQQTEGLNRL
Ga0307473_102590432	3300031820	Hardwood Forest Soil	MDSSREALKPDERGLGGAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLEREVARLS
Ga0307478_1000995313	3300031823	Hardwood Forest Soil	MGFLPEAPEPDESGLAVAPAKSHGKLALALAVIAIGLSLVLAFLYLRSVRRLEREVAQLSQQTEAFRR
Ga0310912_111531892	3300031941	Soil	MGFSPEAPEPDESGLAVAPAKSHGKLALALGVIAIGLSLLLGSLYLRSVRRLEREVAQLSQQTEA
Ga0310910_106520261	3300031946	Soil	MGFSPEAPEPDESGLAVAPAKSHGKLALALGVIAIGLSLLLGSLYLRSVRRLEREVAQLSQQTEAFRR
Ga0306926_101213821	3300031954	Soil	MMDFSRVPLNPDERGLEDASAKSQGKLALALGVIAIALSLVLGCVYLISIRRLE
Ga0306926_103097702	3300031954	Soil	VDFPPEAMEPDESGIAVAPAKSHGKLALALGVIAISLSLLLGFLYLRSVRRLELEVAQLSQQTEAFRQLVER
Ga0307479_100110071	3300031962	Hardwood Forest Soil	MMDFPRVPLNPDERGLEDASAKSQLKLALALGVIAIALSLVLGFVYLISVRHLEGELARLSQQTEGL
Ga0335080_100352776	3300032828	Soil	MIDSSHAPLEPYERGHGDAPAKPQGKLALALGMTAIVLSLVLGAVYLISVRRLEREMAR
Ga0335077_120702601	3300033158	Soil	MDSSREALKPDERGLGDAPAKSQGKLALALGVIAIALSLVLGFVYLISVRRLERDVARLSQQTEGF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters