NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F063221

Metagenome Family F063221

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F063221
Family Type Metagenome
Number of Sequences 129
Average Sequence Length 43 residues
Representative Sequence MAGAWVSSYCLNVEGFPRILHATLQKLGVKDRPEYEGHEYE
Number of Associated Samples 63
Number of Associated Scaffolds 129

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 96.12 %
% of genes from short scaffolds (< 2000 bps) 97.67 %
Associated GOLD sequencing projects 63
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (93.023 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere
(93.798 % of family members)
Environment Ontology (ENVO) Unclassified
(96.124 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(94.574 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 36.23%    β-sheet: 0.00%    Coil/Unstructured: 63.77%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A93.02 %
All OrganismsrootAll Organisms6.98 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005543|Ga0070672_101922218Not Available533Open in IMG/M
3300005840|Ga0068870_11397447Not Available513Open in IMG/M
3300014745|Ga0157377_11299836All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum568Open in IMG/M
3300015267|Ga0182122_1049696Not Available560Open in IMG/M
3300015274|Ga0182188_1049286Not Available536Open in IMG/M
3300015275|Ga0182172_1004339Not Available1106Open in IMG/M
3300015279|Ga0182174_1047539Not Available601Open in IMG/M
3300015281|Ga0182160_1029034Not Available680Open in IMG/M
3300015282|Ga0182124_1027766Not Available684Open in IMG/M
3300015282|Ga0182124_1046783Not Available594Open in IMG/M
3300015283|Ga0182156_1010177Not Available924Open in IMG/M
3300015283|Ga0182156_1052398Not Available588Open in IMG/M
3300015289|Ga0182138_1010803Not Available909Open in IMG/M
3300015289|Ga0182138_1026300Not Available714Open in IMG/M
3300015289|Ga0182138_1089014Not Available503Open in IMG/M
3300015291|Ga0182125_1089698Not Available511Open in IMG/M
3300015292|Ga0182141_1005324All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius1119Open in IMG/M
3300015292|Ga0182141_1042786Not Available635Open in IMG/M
3300015294|Ga0182126_1023853Not Available753Open in IMG/M
3300015294|Ga0182126_1035907Not Available672Open in IMG/M
3300015294|Ga0182126_1067132Not Available560Open in IMG/M
3300015295|Ga0182175_1069651Not Available560Open in IMG/M
3300015296|Ga0182157_1033958Not Available699Open in IMG/M
3300015298|Ga0182106_1016546Not Available860Open in IMG/M
3300015298|Ga0182106_1033179Not Available705Open in IMG/M
3300015298|Ga0182106_1051084Not Available623Open in IMG/M
3300015300|Ga0182108_1062292Not Available594Open in IMG/M
3300015300|Ga0182108_1092910Not Available525Open in IMG/M
3300015302|Ga0182143_1032956Not Available708Open in IMG/M
3300015304|Ga0182112_1038634Not Available679Open in IMG/M
3300015305|Ga0182158_1049429Not Available630Open in IMG/M
3300015307|Ga0182144_1061086Not Available600Open in IMG/M
3300015307|Ga0182144_1068963Not Available579Open in IMG/M
3300015307|Ga0182144_1079990Not Available553Open in IMG/M
3300015308|Ga0182142_1038767Not Available699Open in IMG/M
3300015317|Ga0182136_1043989Not Available772Open in IMG/M
3300015322|Ga0182110_1083508Not Available571Open in IMG/M
3300015323|Ga0182129_1031868Not Available738Open in IMG/M
3300015341|Ga0182187_1182841Not Available520Open in IMG/M
3300015342|Ga0182109_1168663Not Available560Open in IMG/M
3300015343|Ga0182155_1055627Not Available827Open in IMG/M
3300015344|Ga0182189_1134620Not Available616Open in IMG/M
3300015345|Ga0182111_1157545Not Available597Open in IMG/M
3300015346|Ga0182139_1163973Not Available589Open in IMG/M
3300015346|Ga0182139_1230064Not Available515Open in IMG/M
3300015346|Ga0182139_1243772Not Available503Open in IMG/M
3300015347|Ga0182177_1168707Not Available585Open in IMG/M
3300015351|Ga0182161_1074251Not Available830Open in IMG/M
3300015351|Ga0182161_1128405Not Available673Open in IMG/M
3300015351|Ga0182161_1138912Not Available653Open in IMG/M
3300015355|Ga0182159_1184701Not Available665Open in IMG/M
3300015355|Ga0182159_1205873Not Available635Open in IMG/M
3300015361|Ga0182145_1054379All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae768Open in IMG/M
3300015361|Ga0182145_1129936Not Available576Open in IMG/M
3300015361|Ga0182145_1165533Not Available531Open in IMG/M
3300017404|Ga0182203_1030824Not Available851Open in IMG/M
3300017404|Ga0182203_1054454Not Available717Open in IMG/M
3300017404|Ga0182203_1068943Not Available666Open in IMG/M
3300017404|Ga0182203_1083152All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii628Open in IMG/M
3300017407|Ga0182220_1037360Not Available676Open in IMG/M
3300017407|Ga0182220_1074451Not Available560Open in IMG/M
3300017409|Ga0182204_1044029All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum680Open in IMG/M
3300017409|Ga0182204_1046556Not Available669Open in IMG/M
3300017409|Ga0182204_1062802Not Available613Open in IMG/M
3300017410|Ga0182207_1082041Not Available651Open in IMG/M
3300017410|Ga0182207_1110550Not Available590Open in IMG/M
3300017410|Ga0182207_1124286Not Available567Open in IMG/M
3300017410|Ga0182207_1159509Not Available520Open in IMG/M
3300017410|Ga0182207_1173602Not Available505Open in IMG/M
3300017411|Ga0182208_1031715Not Available770Open in IMG/M
3300017411|Ga0182208_1129537Not Available502Open in IMG/M
3300017413|Ga0182222_1050628Not Available614Open in IMG/M
3300017413|Ga0182222_1094433Not Available521Open in IMG/M
3300017415|Ga0182202_1090137Not Available579Open in IMG/M
3300017415|Ga0182202_1129156Not Available515Open in IMG/M
3300017415|Ga0182202_1135444Not Available507Open in IMG/M
3300017420|Ga0182228_1036586Not Available807Open in IMG/M
3300017424|Ga0182219_1140703Not Available502Open in IMG/M
3300017425|Ga0182224_1044294Not Available762Open in IMG/M
3300017425|Ga0182224_1047155Not Available747Open in IMG/M
3300017425|Ga0182224_1077060All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii643Open in IMG/M
3300017425|Ga0182224_1162391Not Available505Open in IMG/M
3300017425|Ga0182224_1166299Not Available501Open in IMG/M
3300017427|Ga0182190_1041123Not Available804Open in IMG/M
3300017427|Ga0182190_1055757Not Available727Open in IMG/M
3300017427|Ga0182190_1060354All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii708Open in IMG/M
3300017427|Ga0182190_1097607Not Available603Open in IMG/M
3300017427|Ga0182190_1115042Not Available570Open in IMG/M
3300017427|Ga0182190_1127177Not Available551Open in IMG/M
3300017430|Ga0182192_1080723Not Available655Open in IMG/M
3300017433|Ga0182206_1050970Not Available721Open in IMG/M
3300017433|Ga0182206_1057842Not Available694Open in IMG/M
3300017433|Ga0182206_1135222Not Available530Open in IMG/M
3300017436|Ga0182209_1072481Not Available667Open in IMG/M
3300017436|Ga0182209_1128914Not Available555Open in IMG/M
3300017436|Ga0182209_1141983Not Available537Open in IMG/M
3300017436|Ga0182209_1173511Not Available502Open in IMG/M
3300017438|Ga0182191_1052137Not Available763Open in IMG/M
3300017438|Ga0182191_1055874Not Available746Open in IMG/M
3300017438|Ga0182191_1086103Not Available648Open in IMG/M
3300017438|Ga0182191_1154103Not Available533Open in IMG/M
3300017438|Ga0182191_1169118Not Available516Open in IMG/M
3300017442|Ga0182221_1078594Not Available640Open in IMG/M
3300017442|Ga0182221_1148310Not Available525Open in IMG/M
3300017443|Ga0182193_1060444Not Available750Open in IMG/M
3300017443|Ga0182193_1143049Not Available563Open in IMG/M
3300017443|Ga0182193_1170816Not Available529Open in IMG/M
3300017681|Ga0182226_1100370Not Available546Open in IMG/M
3300017682|Ga0182229_1054046Not Available682Open in IMG/M
3300017682|Ga0182229_1087886Not Available544Open in IMG/M
3300017683|Ga0182218_1046431All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum724Open in IMG/M
3300017683|Ga0182218_1107078Not Available563Open in IMG/M
3300017683|Ga0182218_1109081Not Available560Open in IMG/M
3300017683|Ga0182218_1126322Not Available534Open in IMG/M
3300017683|Ga0182218_1147558Not Available509Open in IMG/M
3300017684|Ga0182225_1093698All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum576Open in IMG/M
3300017684|Ga0182225_1108288Not Available551Open in IMG/M
3300017684|Ga0182225_1141055Not Available506Open in IMG/M
3300017685|Ga0182227_1056644Not Available704Open in IMG/M
3300017685|Ga0182227_1081829Not Available609Open in IMG/M
3300017686|Ga0182205_1036095Not Available840Open in IMG/M
3300017686|Ga0182205_1091686Not Available622Open in IMG/M
3300017689|Ga0182231_1108828Not Available538Open in IMG/M
3300017689|Ga0182231_1125174Not Available504Open in IMG/M
3300025899|Ga0207642_10871445Not Available576Open in IMG/M
3300025942|Ga0207689_11300232Not Available611Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Miscanthus PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere93.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.33%
RootHost-Associated → Plants → Roots → Unclassified → Unclassified → Root1.55%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.78%
Switchgrass PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere0.78%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300014486Endophyte microbial communities from Sorghum bicolor roots, Mead, Nebraska, USA - 072115-40_1 MetaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015267Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015274Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015275Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015279Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015281Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015282Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015283Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015289Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015291Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015292Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015294Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015295Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015296Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015298Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015300Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015302Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015304Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015305Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015307Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015308Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015317Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015322Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015323Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015341Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015342Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015343Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015344Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015345Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015346Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015347Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015351Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015355Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015361Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017404Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017407Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017409Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017410Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017411Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017413Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017415Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017420Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017424Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017425Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017427Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017430Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017433Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017436Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017438Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017442Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017443Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017681Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017682Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017683Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017684Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017685Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017686Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017689Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0070672_10192221813300005543Miscanthus RhizosphereMAGAWVSSYCLNTEGFPKILYATLQKLRVKDRPKYEGREY
Ga0068870_1139744713300005840Miscanthus RhizosphereMAGAWVSSYCLNIEGFSRILHATLQKLGVKDCPEYEGREYEKHGTDRCE
Ga0182004_1023019913300014486RootMAEGAWTSSYCLSVEGFPKLLYATMQKLGIKDRPEYEGREYEEHE
Ga0182004_1029595423300014486RootMVEGVWTSSYCLSVEGFPKLLYATMQKLGIKDRPEYEGREYE
Ga0157377_1129983613300014745Miscanthus RhizosphereMAGAWVSTYCLNVEGFPKILHATLQKLGVKDHPEYEGREYEEYGTE
Ga0182122_104969613300015267Miscanthus PhyllosphereMAGAWVSSYCLNVEDFSRILHATLQKLRVKDRPEYEGR
Ga0182188_104928613300015274Miscanthus PhyllosphereMAGAWVSTYCLNVEGFPRILHATLQKLGVKDRPEYEGRE
Ga0182172_100433913300015275Miscanthus PhyllosphereMAGAWVSSYCLNVEGFPRILHATLQKLGVKDRPEYEGREYEKHGT
Ga0182174_104753923300015279Miscanthus PhyllosphereMAGAWVSSYCLNTEGFPKILYATLQKLGVKDRPEYEGCEY
Ga0182160_102903413300015281Miscanthus PhyllosphereMVGAWVSSYCLNPKGFPKILYATLQKLGVKDRPEYEGREYEKHGTE
Ga0182124_102776613300015282Miscanthus PhyllosphereMAGAWVSSYYVNVEGFLRILHAILQKLRVKDRPKYEGCEYEKHGTERCEV
Ga0182124_104678313300015282Miscanthus PhyllosphereMAGAWVSSYCLNTESFPKILYANLQKLRVNDRPEYEGSEYEK
Ga0182156_101017713300015283Miscanthus PhyllosphereMAGAWVSSYCLNTESFPNILYATLQKLGVKDHPEYEGREYEK
Ga0182156_105239813300015283Miscanthus PhyllosphereMARTWVSSYCLNIEGFPRILHATLQKLGVNDRPKYDGREYEEHDTE
Ga0182138_101080313300015289Miscanthus PhyllosphereMVGAWVSSYCLNVEGFPRILHATLQKLEVKDRLEYEG
Ga0182138_102630013300015289Miscanthus PhyllosphereMAGAWVSSYCLNIEGFPRILHATLQKLGVNDRPKYDGRE
Ga0182138_108901413300015289Miscanthus PhyllosphereMAGAWVSSYYLNVEGFPKILHATLQKLRVKDHPEYEGHEYE*
Ga0182125_108969813300015291Miscanthus PhyllosphereMAGAWVSSYCLNVEGFPRVLHATLQKLRVKDRPEY
Ga0182141_100532423300015292Miscanthus PhyllosphereMAGAWVSSYCLNVEGFPRILHATLQKLGVKDHPEYEGHEYEKHG
Ga0182141_104278613300015292Miscanthus PhyllosphereMAGAWVSSYCLNVEGFPRILHATLQKLGVKDRPEY
Ga0182126_102385313300015294Miscanthus PhyllosphereMARAWVSSYCLNTKGFPKILYATLQKLEVKDHPKYEGREYEKHGT
Ga0182126_103590713300015294Miscanthus PhyllosphereMAGAWVSSYCLNTKGFPKILYATLQMLGVKHRPEYEGREYEKHGTE
Ga0182126_106713213300015294Miscanthus PhyllosphereMAGAWISSYCLNVEGFPRILYATVQKLGVKDRPEYEGHEYE
Ga0182175_106965113300015295Miscanthus PhyllosphereMAGAWVSSYCLNVEVFPRIQHATLQKLRVKDHPEYEGREYEKHGTE
Ga0182157_103395823300015296Miscanthus PhyllosphereMVGAWVSSYYLNTEGFPKILYATLQKLGVKDRPEYECREYEKHGTV*
Ga0182106_101654613300015298Miscanthus PhyllosphereMVGAWVSSYCLNTEGFPKILYATLQKLRVKDCPKYEGCEYEKHGTER
Ga0182106_103317913300015298Miscanthus PhyllosphereMAGAWVNSYCLNTEGFPKILYTTLQKLKVKDHPKYEGR
Ga0182106_105108413300015298Miscanthus PhyllosphereMARAWVSSYCLNTKGFPKILYATLQMLGVKHRPEYEGREYEKHGTER
Ga0182108_106229213300015300Miscanthus PhyllosphereMVGAWVSTYCLNIKGFPRILHATVQKLRVRDRPEY
Ga0182108_109291023300015300Miscanthus PhyllosphereMTGARVSTYCLNVEGFPRILHATLQKLGVKDRPEYEGREYQKYGTD
Ga0182143_103295613300015302Miscanthus PhyllosphereMVGAWVSSYCLNTEGFPKIMYATLQKLRVKDRPEYEGHENEKHG
Ga0182112_103863413300015304Miscanthus PhyllosphereMAGAWVSGYCLNTEGFPKILYTTLQKLEVKDHPEYDGHEYEKHG
Ga0182158_104942913300015305Miscanthus PhyllosphereMAGAWVSTYCLNIEGFPRILHATLQKLGVNDRPEYEGRE
Ga0182144_106108613300015307Miscanthus PhyllosphereMAGAWVSSYFLNVEGFPRILHATLQKFGVRDHPEY
Ga0182144_106896313300015307Miscanthus PhyllosphereMAGAWVSSYCLNTKGFPKILYATLQKLKVKDRPEYEGL
Ga0182144_107999013300015307Miscanthus PhyllosphereMAGAWVSSYCLNTEGFPKILYATLQKLRVKDCPEYEGHE
Ga0182142_103876713300015308Miscanthus PhyllosphereMAVAWVSSYCLNTEGFPKILYATLQKLGVKDHPEYEGRVYEKHGTEQCEV
Ga0182136_104398913300015317Switchgrass PhyllosphereMAGHWVSSRCLNTEGFPKVLHATLQQLGVQDRPEYEGREYE
Ga0182110_108350813300015322Miscanthus PhyllosphereMAGAWVSSYCLIVEGFPRILHATLQKFRVKDRPEYEGRE
Ga0182129_103186813300015323Miscanthus PhyllosphereMAGAWVSSYCLNTEGFSKILYTTLQKVGVKDRPKYE
Ga0182187_118284113300015341Miscanthus PhyllosphereMAGAWVSSYCLNVEGFPRILHATLQKLRVKDRPEYEGHKYEKHGT
Ga0182109_116866323300015342Miscanthus PhyllosphereMVGACVSSYCLNAEGFPNILNATLQKIGVKDHPEHEGREYEK
Ga0182155_105562713300015343Miscanthus PhyllosphereMTGACVSTYCLNVEGFPRILHATLQKLGVKDRPEYEGREY
Ga0182189_113462013300015344Miscanthus PhyllosphereMAGAWVSSYCLNTEGFPRILYATLQKLEVKDRLEYEGHEYEK
Ga0182111_115754513300015345Miscanthus PhyllosphereMAGAWVSSYCLNIEGFPRILHATLQKLGVKHRPEYEGHEYEEHGTQ
Ga0182139_116397323300015346Miscanthus PhyllosphereMVGACVSSYCLNAEGFPNILNATLQKIGVKDHPEY
Ga0182139_123006413300015346Miscanthus PhyllosphereMAGAWVSTYCLNVEGFPKILHATLQKVGVRDRLEYEEHG
Ga0182139_124377213300015346Miscanthus PhyllosphereMAGAWVSSYCLNVEGFPRILHATLQKLRVKDRPEYEGR
Ga0182177_113532913300015347Miscanthus PhyllosphereMAEGVWTSSYLLNAEGFPKLLYATMQRFRIKDRPEYE
Ga0182177_116870713300015347Miscanthus PhyllosphereMAGAWVSSYCLNVEGFPRILHATLQKLGVKDHPEYEGREYE
Ga0182161_107425113300015351Miscanthus PhyllosphereMAGAWVSSYCLNTEGFPKILYATLQKVGVKDRPEYEG
Ga0182161_112840513300015351Miscanthus PhyllosphereMAGTWVSSYCLNVEGFPQMLHATFQKLEVRDRPEYEGH
Ga0182161_113891213300015351Miscanthus PhyllosphereMAGAWVSSYCLNTEGFPKILYATLQKPGVKDRPEYEGHEYDKHG
Ga0182159_118470113300015355Miscanthus PhyllosphereMAGAWVSTYCLNVEGFPKILHTTLQKLGVKDRPEYEG
Ga0182159_120587313300015355Miscanthus PhyllosphereMAGAWVSSYCLNIEGFPRILHATLQKLRVKDHPEYEGHEYEEHGTER
Ga0182145_105437913300015361Miscanthus PhyllosphereMAGACVSTYCLNVEGFLRILHATVQKLGVRDRPEYEGREYEEHGTERCEVTVYI
Ga0182145_112993613300015361Miscanthus PhyllosphereMAGAWVSSYCLNVKGFPRILHATLQKLRVKDHPEYEGHEYEKHGTERCEVTV
Ga0182145_116553313300015361Miscanthus PhyllosphereMARSWVSSYCLNVEGFPRILHATLQKLRVKDRPEYEE
Ga0182203_103082413300017404Miscanthus PhyllosphereMAGAWVSTYCLNVEGFPKILHATLQKLGVNDRPEY
Ga0182203_105445413300017404Miscanthus PhyllosphereMIGALVSSYCLNIDGFPKILYATLQKLEVKDRPKYEGH
Ga0182203_106894313300017404Miscanthus PhyllosphereMVGAWVSSYCLNVGGFPRILHVTLQKLGVKDRPEHEGHEY
Ga0182203_108315213300017404Miscanthus PhyllosphereMAGAWVSTYCLNIEGFPRILHATLQKLGVNDRPEYEGREYEEHGTERCEV
Ga0182220_103736013300017407Miscanthus PhyllosphereMAGTWVSTYCLNVEGFPKILHATLQKLRVKDHPEYEGCEYEEHGTERCKVT
Ga0182220_107445113300017407Miscanthus PhyllosphereMAGAWVSSYCLSTEGFSKILYATLQKLGVKDRLEYEGREYEKHGTER
Ga0182204_104402913300017409Miscanthus PhyllosphereMTGACVSTYCLNVEGFPRILHATLQKLGVKDRPEYEGREYQKYGTDRCEVTIY
Ga0182204_104655613300017409Miscanthus PhyllosphereMAGAWVSSYCLNVEGFPRILHTTLQKLRVKDRPEYEGREYEKH
Ga0182204_106280213300017409Miscanthus PhyllosphereMEGSWVSSYCLNTKGFPKILYDTLQKLRVKDCPEYEGREYE
Ga0182207_108204123300017410Miscanthus PhyllosphereMAGAWVSSYCLNVEGFPRILHATLQKLGVKDRPEYEGHEYE
Ga0182207_111055013300017410Miscanthus PhyllosphereMSRAWVSSYCLNIEGFPKILHAILQKLRVKDHPEYEG
Ga0182207_112428613300017410Miscanthus PhyllosphereMVGTWVSSYCLNVEGFTRILHATLQKLRVKDRPEYEG
Ga0182207_115950913300017410Miscanthus PhyllosphereMAGALVHSYCLNVDGFPRILHATLQKLEVKDRPEYE
Ga0182207_117360213300017410Miscanthus PhyllosphereMARARVSNYCLNVEGFPRILLATLQKLRVKDHPEYEGREYEERGIEWCEVT
Ga0182208_103171513300017411Miscanthus PhyllosphereMAGAWVSSYCLNVEGFPRIMHATLQKLGVKDHPKYEGHEYEKHGTKRCEVTIY
Ga0182208_112953713300017411Miscanthus PhyllosphereMVGAWVSSYCLNIEGFPRILHATLQKLGVKDHLEY
Ga0182222_105062813300017413Miscanthus PhyllosphereMAGAWVSSYCLNTEGFPKILYATLQKLGVKDRPEYESR
Ga0182222_109443313300017413Miscanthus PhyllosphereMAGAWVSSYCLNVEGFPRILHATLQKLRVKDRLEYEGHEYEKLG
Ga0182202_109013713300017415Miscanthus PhyllosphereMAGAWVSSYYLNVEGFLRILHATLQKLRVKDHPEYEGREYEKLGTKRYEVTI
Ga0182202_112915613300017415Miscanthus PhyllosphereMVGAWVSSYYLNVEGFPRILHATLQKLGVKDHPEYE
Ga0182202_113544413300017415Miscanthus PhyllosphereMVGAWVSSYCLNVEGFPRILHATLQKLGVKDHPEYEGHEYEKHGTDRCEVTVY
Ga0182228_103658613300017420Miscanthus PhyllosphereMVGAWVSTNCLNVEGFPKILHATLQKLGVKDRPEYEG
Ga0182219_114070313300017424Miscanthus PhyllosphereMAGAWVSSYCLNTKGFPKILYATLQKLVVKDCLKYEGREYEKLGTMRCEVTVTH
Ga0182224_104429413300017425Miscanthus PhyllosphereMAGACVSTYCLSFEGFPRILHATLQKLRVKDRPEYEGRE
Ga0182224_104715513300017425Miscanthus PhyllosphereMARAWVSSYCLNIEGFPRILHATLQKLEVKDHPEYEGC
Ga0182224_107706013300017425Miscanthus PhyllosphereMAGAWVGSYCLNTEGFPKILYATLQKLRVKDRPEYEGREYEKHGTERC
Ga0182224_116239113300017425Miscanthus PhyllosphereMAGAWVSSYCLNTEGFPRILYVTLQKLGVKDRPEYEGREYEM
Ga0182224_116629913300017425Miscanthus PhyllosphereMAGAWVSSFHLNVEGFPRILHATLQKLGVKDHPEYKGREYEKMAPSGVRLSS
Ga0182190_104112313300017427Miscanthus PhyllosphereMAGAWVSSYCLNVEGFPRILHATLQKLGVKDRPEYEGRE
Ga0182190_105575713300017427Miscanthus PhyllosphereMAGAWVSSYCLNVEGFPRILHATQQKLRVKDRPQYEGREYEKHGT
Ga0182190_106035413300017427Miscanthus PhyllosphereMAGAWVSSYCLNVEGFPRILHAILQKLGVKDRPEYEGREYEEHGTKRCEVT
Ga0182190_109760713300017427Miscanthus PhyllosphereMVGAWVSSYCLNANGFPRILHATLQKLGVKDHPEYEGHEYGK
Ga0182190_111504213300017427Miscanthus PhyllosphereMAGAWVSSYCLNVEGFLRILHATLQKLGVKDCPEYKGPEYEKHGTERCEVTVYIRK
Ga0182190_112717713300017427Miscanthus PhyllosphereMAGAWVSNCCLNTEGFPKILYATLQKLRDKDRPEYEGHEYEKHGTEQC
Ga0182192_108072313300017430Miscanthus PhyllosphereMAGAWVSSYCLNTEGFPKILYATLQKLKVKDRPEYEGCEYEEHGAKR
Ga0182206_105097013300017433Miscanthus PhyllosphereMAGAWVSSYCLNVEGFPRILHATLQKLGVKDRPEYESHEYEKHGTERCEVTI
Ga0182206_105784223300017433Miscanthus PhyllosphereMAGAWVSSYCLNIEGFPRILHATLQKLGVKDRPEYEGHEYEEQGTEQCEVIV
Ga0182206_113522213300017433Miscanthus PhyllosphereMAGAWVSSYCLNVEDFPRIRHATLQKLRVKNCPKYEGHDYEKHSTEWCEV
Ga0182209_107248113300017436Miscanthus PhyllosphereMAGAWVSSYCLNTEGFPRILYVILQKLGVKDRPEY
Ga0182209_112891413300017436Miscanthus PhyllosphereMVGAWVSSYCLNTKGFSKILYATLQKLRVKDRPEYEGHE
Ga0182209_114198313300017436Miscanthus PhyllosphereMAGAWVSSYCLNVEGFLRILYATLQKFGVKDRSKYE
Ga0182209_117351113300017436Miscanthus PhyllosphereMAGTWVSSYCLNVQGFPRILHATLQKLGVKYRPEYEG
Ga0182191_105213713300017438Miscanthus PhyllosphereMVGAWVSNYCLNVEGFPRILQATLQKLRVKDHPEYEGHEYEEHGT
Ga0182191_105587413300017438Miscanthus PhyllosphereMAGAWVSSYCLNVEGFPRILLATLQKLRVKDHPEYEGREYEERGIEWCEVT
Ga0182191_108610313300017438Miscanthus PhyllosphereMAGAWVNSYCLNVEGFLRILHATLQKLGVKDRPEYEGLEYEK
Ga0182191_115410313300017438Miscanthus PhyllosphereMAGAWVSTYCLNSEGFPRILHATVQKLGVRDHPEYEGHEYEEHGTERCEVT
Ga0182191_116911813300017438Miscanthus PhyllosphereMVGARISSYCLNTEGFSKILYATLQKLKVKDRSEYEGHENE
Ga0182221_107859413300017442Miscanthus PhyllosphereMVGAWVSSYYLNIEGFPRILYAALQKLKVKDHPEYEG
Ga0182221_114831013300017442Miscanthus PhyllosphereMAGAWVSSYCLNIEGFPRILHATLQKLGVKDRPEYEG
Ga0182193_106044413300017443Miscanthus PhyllosphereMAGAWVSSYYLNIEGFPRILHATLQNLGVKDRPKYEGH
Ga0182193_114304913300017443Miscanthus PhyllosphereMAGAWVSTYCLNIEGFPRILYATLQKLGVKDRPEYEGREYEEH
Ga0182193_117081613300017443Miscanthus PhyllosphereMVGAWVSSYCLNVEGFPRILHATLQKLGVKDRLEYEVHEYENHG
Ga0182226_110037013300017681Miscanthus PhyllosphereMAGAWVSSYCLNIEGFPRSLHATLQNLGVKDRPEYEGREYEEHGTER
Ga0182229_105404613300017682Miscanthus PhyllosphereMARAWVSTYCLNIEGFPRILHATLQKLGVKDRPEYEGREY
Ga0182229_108788613300017682Miscanthus PhyllosphereMAGTWVSTYCLNVEGFPRILHATLQKLKVKDHPKYEGHEYEEHGTERCE
Ga0182218_104643113300017683Miscanthus PhyllosphereMAGAWVSSYCLNTEGFPRILYVILQKLGVKDHPEYEGREYEKH
Ga0182218_110707813300017683Miscanthus PhyllosphereMSRAWVSSYCLNIEGFPKILHAILQKLRVKDHPEYEGCEYEEHGTER
Ga0182218_110908113300017683Miscanthus PhyllosphereMAGAWVSSYCLNIEGFPKIMYATLQKLIVKDHPEYEGCEYEKHG
Ga0182218_112632213300017683Miscanthus PhyllosphereMAGAWVSSYCLNIEGFSRILYATLQKLGVKDCPEYKGPEYEKHGTERCEVTVYI
Ga0182218_114755813300017683Miscanthus PhyllosphereMVGAWVSSYCLNVEGFPKILHTTLQKLGVKARPEYE
Ga0182225_109369813300017684Miscanthus PhyllosphereMAGAWVSSYYLNIEVFPRILYAALQKLKVKDHPEYEGREYEKHGTERCEVTV
Ga0182225_110828813300017684Miscanthus PhyllosphereMAGAWVSSYCLNIEGFPIILHATLQKVRVKDRPKYEGHEYEKHGTDRC
Ga0182225_114105513300017684Miscanthus PhyllosphereMAGAWVSSYCLNTEGFPKILCATLQKLGVKDCPEYEGCEYEKHGTE
Ga0182227_105664413300017685Miscanthus PhyllosphereMAGAWVSSYCLSNEGFPKILYATLQKLRVKDRPEYEGREYEKH
Ga0182227_108182913300017685Miscanthus PhyllosphereMPGAWVSSYCLNTEGFPKILCATLQKLGVKDCPEYEGCEYEKHGTERCEVTVY
Ga0182205_103609523300017686Miscanthus PhyllosphereMAGAWVSTYCLNVEGFPRILHATLQKLGVNDRPEYEGRE
Ga0182205_109168613300017686Miscanthus PhyllosphereMARVWVSSYCPNIEGFPRILHATQQKLRVKDRPEYEGREYEKHGTDWCEVTIY
Ga0182231_110882813300017689Miscanthus PhyllosphereMAGAWVSTYCLNVEGFPRILHDTLQKLEVKDRPEFEGREYEE
Ga0182231_112517413300017689Miscanthus PhyllosphereMTGAWVSSYCLNSEGFPKILYATLQKLGVKGHPKYEGHEYEKHCTEWCEVTV
Ga0207642_1087144513300025899Miscanthus RhizosphereMAGAWVSSYCLNTEGFPKILYATLQKLRVKDRPKY
Ga0207689_1130023213300025942Miscanthus RhizosphereMAGAWVSTYCLNVEGFPKILHATLQKLGVNDRPKYEGREYEEHGTER

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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