Metagenome / Metatranscriptome Family F063245

Basic Information
Family ID	F063245
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	64 residues
Representative Sequence	MNSVELPKLDKLVKVSIYLLELASRLCPYIEDKDVACIVIPMENCVSYPDWVIQVGMNL
Number of Associated Samples	91
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Eukaryota
% of genes with valid RBS motifs	13.28 %
% of genes near scaffold ends (potentially truncated)	30.23 %
% of genes from short scaffolds (< 2000 bps)	94.57 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Eukaryota (62.016 % of family members)
NCBI Taxonomy ID	2759
Taxonomy	All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere (65.892 % of family members)
Environment Ontology (ENVO)	Unclassified (93.023 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (83.721 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.59% β-sheet: 0.00% Coil/Unstructured: 72.41%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00665	rve	3.10
PF13456	RVT_3	2.33
PF13960	DUF4218	1.55
PF13952	DUF4216	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	3.10
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	3.10
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	3.10
COG4584	Transposase	Mobilome: prophages, transposons [X]	3.10

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.79 %
Unclassified	root	N/A	37.21 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.02 %
Unclassified	root	N/A	37.21 %
Viruses	superkingdom	All Organisms → Viruses	0.78 %

Name	Rank	Taxonomy	Distribution
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	62.02 %
Unclassified	root	N/A	37.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	62.02 %
Unclassified	root	N/A	37.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	62.02 %
Unclassified	root	N/A	37.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	62.02 %
Unclassified	root	N/A	37.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	62.02 %
Unclassified	root	N/A	37.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	62.02 %
Unclassified	root	N/A	37.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	62.02 %
Unclassified	root	N/A	37.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	62.02 %
Unclassified	root	N/A	37.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	62.02 %
Unclassified	root	N/A	37.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	61.24 %
Unclassified	root	N/A	37.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	61.24 %
Unclassified	root	N/A	37.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	61.24 %
Unclassified	root	N/A	37.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	61.24 %
Unclassified	root	N/A	37.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	61.24 %
Unclassified	root	N/A	37.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	61.24 %
Unclassified	root	N/A	37.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	61.24 %
Unclassified	root	N/A	37.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	61.24 %
Unclassified	root	N/A	37.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Panicodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae	60.47 %
Unclassified	root	N/A	37.21 %
Andropogonodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Paniceae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae	60.47 %
Unclassified	root	N/A	37.21 %
Andropogoneae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Panicinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae	60.47 %
Unclassified	root	N/A	37.21 %
Tripsacinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Panicum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	60.47 %
Unclassified	root	N/A	37.21 %
Zea	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Panicum miliaceum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	47.29 %
Unclassified	root	N/A	37.21 %
Panicum sect. Hiantes	section	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes	3.10 %
Zea mays	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Panicum miliaceum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	47.29 %
Unclassified	root	N/A	37.21 %
Panicum virgatum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	3.10 %
Zea mays	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005466\|Ga0070685_11324144	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	551	Open in IMG/M
3300005544\|Ga0070686_101244803	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	620	Open in IMG/M
3300005844\|Ga0068862_102457669	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	533	Open in IMG/M
3300009973\|Ga0105136_111380	Not Available	549	Open in IMG/M
3300009973\|Ga0105136_114294	Not Available	500	Open in IMG/M
3300009980\|Ga0105135_107813	Not Available	768	Open in IMG/M
3300009981\|Ga0105133_119952	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	587	Open in IMG/M
3300009989\|Ga0105131_101527	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	1530	Open in IMG/M
3300009990\|Ga0105132_123664	Not Available	622	Open in IMG/M
3300009992\|Ga0105120_1043695	Not Available	557	Open in IMG/M
3300009992\|Ga0105120_1045559	Not Available	548	Open in IMG/M
3300009994\|Ga0105126_1054873	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	510	Open in IMG/M
3300009994\|Ga0105126_1056668	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	503	Open in IMG/M
3300009995\|Ga0105139_1068184	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	656	Open in IMG/M
3300009995\|Ga0105139_1094818	Not Available	571	Open in IMG/M
3300010401\|Ga0134121_12903661	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	526	Open in IMG/M
3300014325\|Ga0163163_11002439	Not Available	898	Open in IMG/M
3300014968\|Ga0157379_11750883	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	610	Open in IMG/M
3300015273\|Ga0182102_1017372	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	656	Open in IMG/M
3300015280\|Ga0182100_1074446	Not Available	558	Open in IMG/M
3300015284\|Ga0182101_1018281	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	866	Open in IMG/M
3300015284\|Ga0182101_1068889	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	574	Open in IMG/M
3300015284\|Ga0182101_1084819	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	534	Open in IMG/M
3300015290\|Ga0182105_1057893	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	628	Open in IMG/M
3300015293\|Ga0182103_1045510	Not Available	658	Open in IMG/M
3300015297\|Ga0182104_1044514	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	712	Open in IMG/M
3300015301\|Ga0182184_1027822	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	774	Open in IMG/M
3300015306\|Ga0182180_1025748	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	804	Open in IMG/M
3300015306\|Ga0182180_1048635	Not Available	638	Open in IMG/M
3300015306\|Ga0182180_1076565	Not Available	543	Open in IMG/M
3300015309\|Ga0182098_1103496	Not Available	543	Open in IMG/M
3300015309\|Ga0182098_1105089	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	541	Open in IMG/M
3300015310\|Ga0182162_1041989	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	753	Open in IMG/M
3300015310\|Ga0182162_1048390	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	718	Open in IMG/M
3300015311\|Ga0182182_1065978	Not Available	629	Open in IMG/M
3300015311\|Ga0182182_1111984	Not Available	520	Open in IMG/M
3300015312\|Ga0182168_1007960	All Organisms → Viruses → Predicted Viral	1284	Open in IMG/M
3300015312\|Ga0182168_1043470	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	769	Open in IMG/M
3300015312\|Ga0182168_1116661	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	536	Open in IMG/M
3300015313\|Ga0182164_1019822	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	987	Open in IMG/M
3300015313\|Ga0182164_1081467	Not Available	616	Open in IMG/M
3300015313\|Ga0182164_1095292	Not Available	581	Open in IMG/M
3300015313\|Ga0182164_1117597	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	535	Open in IMG/M
3300015317\|Ga0182136_1058358	Not Available	701	Open in IMG/M
3300015317\|Ga0182136_1082241	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	620	Open in IMG/M
3300015319\|Ga0182130_1084874	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	602	Open in IMG/M
3300015324\|Ga0182134_1132325	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	526	Open in IMG/M
3300015325\|Ga0182148_1083477	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	623	Open in IMG/M
3300015326\|Ga0182166_1039540	Not Available	801	Open in IMG/M
3300015326\|Ga0182166_1120374	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	541	Open in IMG/M
3300015327\|Ga0182114_1152244	Not Available	516	Open in IMG/M
3300015328\|Ga0182153_1097186	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	601	Open in IMG/M
3300015331\|Ga0182131_1144543	Not Available	519	Open in IMG/M
3300015331\|Ga0182131_1154215	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	505	Open in IMG/M
3300015332\|Ga0182117_1058199	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	779	Open in IMG/M
3300015332\|Ga0182117_1098504	Not Available	635	Open in IMG/M
3300015332\|Ga0182117_1148555	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	533	Open in IMG/M
3300015333\|Ga0182147_1097171	Not Available	633	Open in IMG/M
3300015334\|Ga0182132_1072820	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	709	Open in IMG/M
3300015334\|Ga0182132_1094718	Not Available	641	Open in IMG/M
3300015336\|Ga0182150_1074714	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	690	Open in IMG/M
3300015336\|Ga0182150_1136419	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	546	Open in IMG/M
3300015337\|Ga0182151_1062755	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	734	Open in IMG/M
3300015339\|Ga0182149_1076548	Not Available	703	Open in IMG/M
3300015339\|Ga0182149_1135600	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	559	Open in IMG/M
3300015339\|Ga0182149_1141629	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	549	Open in IMG/M
3300015340\|Ga0182133_1087951	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	699	Open in IMG/M
3300015348\|Ga0182115_1236204	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	583	Open in IMG/M
3300015349\|Ga0182185_1082393	Not Available	902	Open in IMG/M
3300015349\|Ga0182185_1261188	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	528	Open in IMG/M
3300015350\|Ga0182163_1077686	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	982	Open in IMG/M
3300015352\|Ga0182169_1227471	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	608	Open in IMG/M
3300015353\|Ga0182179_1144000	Not Available	740	Open in IMG/M
3300015353\|Ga0182179_1233363	Not Available	591	Open in IMG/M
3300015353\|Ga0182179_1292860	Not Available	529	Open in IMG/M
3300015354\|Ga0182167_1265126	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	617	Open in IMG/M
3300017408\|Ga0182197_1056078	Not Available	734	Open in IMG/M
3300017408\|Ga0182197_1075307	Not Available	656	Open in IMG/M
3300017412\|Ga0182199_1155105	Not Available	562	Open in IMG/M
3300017414\|Ga0182195_1049742	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	888	Open in IMG/M
3300017414\|Ga0182195_1130405	Not Available	624	Open in IMG/M
3300017414\|Ga0182195_1189292	Not Available	537	Open in IMG/M
3300017421\|Ga0182213_1248481	Not Available	510	Open in IMG/M
3300017422\|Ga0182201_1098780	Not Available	576	Open in IMG/M
3300017435\|Ga0182194_1125651	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	544	Open in IMG/M
3300017439\|Ga0182200_1056042	Not Available	730	Open in IMG/M
3300017439\|Ga0182200_1149326	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	520	Open in IMG/M
3300017445\|Ga0182198_1144293	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	576	Open in IMG/M
3300017693\|Ga0182216_1143377	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	602	Open in IMG/M
3300017694\|Ga0182211_1111812	Not Available	642	Open in IMG/M
3300025910\|Ga0207684_11581037	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	531	Open in IMG/M
3300025986\|Ga0207658_10920026	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	797	Open in IMG/M
3300028049\|Ga0268322_1021027	Not Available	699	Open in IMG/M
3300028050\|Ga0268328_1017185	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	820	Open in IMG/M
3300028050\|Ga0268328_1027837	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	705	Open in IMG/M
3300028050\|Ga0268328_1033641	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	661	Open in IMG/M
3300028053\|Ga0268346_1000527	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1809	Open in IMG/M
3300028054\|Ga0268306_1013917	Not Available	678	Open in IMG/M
3300028055\|Ga0268338_1032510	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	558	Open in IMG/M
3300028056\|Ga0268330_1061390	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	507	Open in IMG/M
3300028058\|Ga0268332_1005644	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	1159	Open in IMG/M
3300028058\|Ga0268332_1021337	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	794	Open in IMG/M
3300028061\|Ga0268314_1037611	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	575	Open in IMG/M
3300028139\|Ga0268355_1010042	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	614	Open in IMG/M
3300028143\|Ga0268348_1015921	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	587	Open in IMG/M
3300028144\|Ga0268345_1024201	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	536	Open in IMG/M
3300028151\|Ga0268308_1002297	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	1176	Open in IMG/M
3300028152\|Ga0268336_1023865	Not Available	547	Open in IMG/M
3300028246\|Ga0268351_1036420	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	505	Open in IMG/M
3300028248\|Ga0268312_1017595	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	645	Open in IMG/M
3300028248\|Ga0268312_1035449	Not Available	516	Open in IMG/M
3300028256\|Ga0268304_1010446	Not Available	572	Open in IMG/M
3300028262\|Ga0268310_1037493	Not Available	565	Open in IMG/M
3300028381\|Ga0268264_11007847	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	839	Open in IMG/M
3300028477\|Ga0268309_1006714	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	702	Open in IMG/M
3300028523\|Ga0268313_1008609	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays	646	Open in IMG/M
3300032464\|Ga0214492_1000024	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	8085	Open in IMG/M
3300032466\|Ga0214503_1273444	Not Available	521	Open in IMG/M
3300032466\|Ga0214503_1279771	Not Available	514	Open in IMG/M
3300032467\|Ga0214488_1000019	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	8229	Open in IMG/M
3300032502\|Ga0214490_1161911	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	503	Open in IMG/M
3300032550\|Ga0321340_1000352	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	3203	Open in IMG/M
3300032625\|Ga0214501_1004974	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	3185	Open in IMG/M
3300032875\|Ga0314737_1001000	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	2805	Open in IMG/M
3300032889\|Ga0314751_1015926	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	1399	Open in IMG/M
3300033525\|Ga0314758_1183779	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	568	Open in IMG/M
3300033526\|Ga0314761_1045873	Not Available	960	Open in IMG/M
3300033538\|Ga0314755_1008255	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	2130	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	96.90%
Environmental	Environmental	3.10%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	96.90%
Terrestrial	Environmental → Terrestrial	3.10%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	83.72%
Unclassified	Host-Associated → Plants → Unclassified	9.30%
Soil	Environmental → Terrestrial → Soil	3.10%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.55%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	83.72%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified	9.30%
Loam	Environmental → Terrestrial → Soil → Loam	2.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	83.72%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified → Unclassified	9.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	65.89%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	17.83%
Switchgrass Associated	Host-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated	9.30%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300009973	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_222 metaG	Host-Associated	Open in IMG/M
3300009980	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_219 metaG	Host-Associated	Open in IMG/M
3300009981	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_208 metaG	Host-Associated	Open in IMG/M
3300009989	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_197 metaG	Host-Associated	Open in IMG/M
3300009990	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_206 metaG	Host-Associated	Open in IMG/M
3300009992	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_108 metaG	Host-Associated	Open in IMG/M
3300009994	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_171 metaG	Host-Associated	Open in IMG/M
3300009995	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_227 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015273	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015280	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015284	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015290	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015293	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015297	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015301	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015306	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015309	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015310	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015311	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015312	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015313	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015317	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015319	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015324	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015325	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015326	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015327	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015328	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015331	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015332	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015333	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015334	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015336	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015337	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015339	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015340	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015348	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015349	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015350	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015352	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015353	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015354	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017408	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017412	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017414	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017421	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017422	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017435	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017439	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017445	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017693	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017694	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028049	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028050	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028053	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028054	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028055	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028056	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028058	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028061	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028139	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028143	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028144	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028151	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028152	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028246	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028248	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028256	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028262	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028477	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028523	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300032464	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032466	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_12SEP2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032467	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_31MAY2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032502	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032550	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_12SEP2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032625	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_12SEP2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032875	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_26JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032889	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_07AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033525	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_28AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033526	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_28AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033538	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_28AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063245

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070685_113241441	3300005466	Switchgrass Rhizosphere	KLDKLVKVSIYLLEPASRLCPYIKDKDVTCIVFLMENCVSYQEVVIQVGMNL*
Ga0070686_1012448031	3300005544	Switchgrass Rhizosphere	MNSVELPKMDKLVKVSIYLLELASRLCPYIEDKDVACIVIPTENCVSCPDQVIQVGMNLSRLP*
Ga0068862_1024576691	3300005844	Switchgrass Rhizosphere	DKLVKVSIYLLELASRLCPCIEEKDMACIVILTENYVSYPEQVIQVGMNLWRLPWLDEPFGE*
Ga0105136_1113801	3300009973	Switchgrass Associated	MNSVELPKMDKLVKVSIYLLELASRLCPYIKDKDVTCIVFLMEKCVSYPEGVTQVGMDL*
Ga0105136_1142941	3300009973	Switchgrass Associated	MDKLVKVSIYLLELASRLCPYIKDKDAACVVFLMENCVSYPGLVTLSDREIVFNVVDI
Ga0105135_1078131	3300009980	Switchgrass Associated	MNSVELPKLDKLVKVSIHLLEPASRLRPYIEDKDVACIVIPMENCVSYPDQVIQVGMNL*
Ga0105133_1199521	3300009981	Switchgrass Associated	MNSIELPKLDKLVKVSIFLIEPASRLCPYTKDKDVACIVIPMKNYVSYPEQVIQVGMNLWRLP*
Ga0105131_1015271	3300009989	Switchgrass Associated	MNSVELPKMDKLVKVSIYLLELASRLCPYIEDKDVTCIVIPMENCVSYPEQVIQVGMHLWRLSWLNEPFGE*
Ga0105132_1236641	3300009990	Switchgrass Associated	MLDKLVKVSIYHLEPASRLCPYIEDKDVACIVIPMENYVSYPGQVIQVGMNL*
Ga0105120_10436951	3300009992	Switchgrass Associated	MNSVELPKLDKLVKVSIYLLEPASRLCLYIEDKDVACIVIPMETCLSYP
Ga0105120_10455591	3300009992	Switchgrass Associated	MDKLVKVSIYLLELASRLCPYIKDKDVTCIVFLMEKCVSYPEGVTQVGMDL*
Ga0105126_10548731	3300009994	Switchgrass Associated	KMDKLGKISIYLLELASKLCLYIEDKDVTCIVIAMENCVSHPEQVIQVGMNMWRLSWLDEPFRE*
Ga0105126_10566682	3300009994	Switchgrass Associated	ELPKLDKLVKVSIYLLELASRLCPYIEDKDVACIVIPMENCVSYPDQVIQVGMNM*
Ga0105139_10681841	3300009995	Switchgrass Associated	MNSVELPKLDKLVKVSIHLLEPASRLRPYIEDKDVAYTVIPMGNCVSYPEQVTQVGMNLWRLSWLEKLFVE*
Ga0105139_10948181	3300009995	Switchgrass Associated	MDKLGKISIYLLELASKLCLYIEDKDVTCIVILMENCVSYHEEAIHVGMNLWRLPWFDEPFGE*
Ga0134121_129036612	3300010401	Terrestrial Soil	VGLPKLDKLVKVSIYLLEPASRLCPYIEDKDVACIIIPMENCVSYPDSVIQVGMNL*
Ga0163163_110024391	3300014325	Switchgrass Rhizosphere	MNSVAKLDKLVKVSIYLLKPASRLCPYIKDKDDACIVIPMESCVSYPDQVIQVSINLSRLPWV*
Ga0157379_117508831	3300014968	Switchgrass Rhizosphere	MNSVELSKLDKLVNVSIYLLELASRLCPYIKDKDVACIVILMENCVSYPEQVIQVGMNL*
Ga0182102_10173721	3300015273	Switchgrass Phyllosphere	MNSIELPKIDKLVNISIYLLELTSRLCPYIEDKDVTCIVIPMENCVSYPEEAIHVGMNLWRLPWLDEPFGE*
Ga0182100_10744461	3300015280	Switchgrass Phyllosphere	MDKLVKVSIYLLELTSRLCPYIEDKDVTCIVIPMENCVSYPEQVIQVSMNLWRLSWLKKSFGE*
Ga0182101_10182812	3300015284	Switchgrass Phyllosphere	MNSVELPKMDKQVKVSIYLLELASRLCSYIEDKDVTCIVILMENCVSYPEQVIQVGMNL*
Ga0182101_10688892	3300015284	Switchgrass Phyllosphere	LPKMAKLVKVSIYLLELASWLCPYIKDKDVTCIVFLMENCVSYPDGAIQIGMNL*
Ga0182101_10848191	3300015284	Switchgrass Phyllosphere	KAGVPYSPVRMNSVELPKLDKLVKVSIDLLEPASRLCPYIKDKDDACIVIPMENCVSYPDQVIQVGMNLWRLPWLEKPIRE
Ga0182105_10578931	3300015290	Switchgrass Phyllosphere	MDKQVKVSIYLLELASRLCPYIEDKDVTCIVIPMENCVSYPEQVIQVGMNLWRLSWLEEPIREKSNMMLPG*
Ga0182103_10455101	3300015293	Switchgrass Phyllosphere	MNSVELSKLDKLVTESIYLLELASRLCPYIKDKDVACIVILMENCVSYLERVIQSV*
Ga0182104_10445142	3300015297	Switchgrass Phyllosphere	MNSVELPKLDKLVKVSIDLLEPASRLCPYIEDKDVACIVIPMENCVSYPDQVIQVGMNL*
Ga0182184_10278221	3300015301	Switchgrass Phyllosphere	MNSIELPKMDKLVKVSIYLLELASRLCPYIKDKDVTCIVFLMENYVSYLEEVIQVGMNLWRLSWLDEPFEE*
Ga0182180_10257482	3300015306	Switchgrass Phyllosphere	MDKLVMVSIYLLELASRLCPYIKDKDVTCIVFLMENYVSYPEEVIQVGMNLWRLSWLDEPFEEYTEMMLSG*
Ga0182180_10486351	3300015306	Switchgrass Phyllosphere	MNSVELPKMDKLVKVSIYLLEVASRLCPYIEEKDVACTVTLMENCVSYPEQVIQSV*
Ga0182180_10765652	3300015306	Switchgrass Phyllosphere	MNSVELPKLDKLVKVSIDLLEPASRFCSYIEDKDVACIVVPMQNCVSYPDSVIQVGMNLILPWLEKPFEE
Ga0182098_11034961	3300015309	Switchgrass Phyllosphere	MNSVELPKLDKLVKVSVYHLELVSRFCPYTEDEDVACIVIPMGNYVSYPDQVIQVGINLSRLPWV*
Ga0182098_11050891	3300015309	Switchgrass Phyllosphere	MNSVELPKLDKLVKVSIYLLEPASRLCPCIEDKAVACIVIPMENYASYPGQVIQVGMNLLRLPWLEKLIRE*
Ga0182162_10419891	3300015310	Switchgrass Phyllosphere	MNSVELPKLDKLVKVYIYLLELAIRFCPYTEDEDVACIVILMENCVSYPDQVIQVGMNLRRLPWLEKPIR*
Ga0182162_10483902	3300015310	Switchgrass Phyllosphere	MNSIELPKLDKLVKVSIYLLGLASRLCPYIVDKDVTYILILTENCVSYPEQVIQVGMNLWRLSWLDEPFGE*
Ga0182182_10659781	3300015311	Switchgrass Phyllosphere	MNSVELPKLDKLVKVSIDLLEPASRLCPYIEDKDVACIVVPMENCVSYPDSVIQVGMNLILPWLEKTIRE
Ga0182182_11119841	3300015311	Switchgrass Phyllosphere	MNSVELTKLDKLVKVSIDLLEPARRLCPYIEDKDVACIVIPMENCVSYPDQVIQVGMNLWRLPWLEEPIRE*
Ga0182168_10079602	3300015312	Switchgrass Phyllosphere	MDKLVKVSIYLLELASRLCPCIEEKDMACIVILTENYVSYPEQVIQVGMNLWRLSWLEKPFGE*
Ga0182168_10434701	3300015312	Switchgrass Phyllosphere	MNSAELPKLDKLVKVSIYLLELASRLCPYIEDKDVACIVIPTENCVSCPDQVIQVGMNLSRLPWLEKPIRE*
Ga0182168_11166611	3300015312	Switchgrass Phyllosphere	ELPKLDKQVKVSIYLLELASRFCRYTEDEDVACIVILMENCVSYPDQVIQVGMNLRRLPWLEKPIR*
Ga0182164_10198222	3300015313	Switchgrass Phyllosphere	MDKLGKISIYLLELASKLCLYIEDKDVTCIVIAMENCVSHPEQVIQVGMNMWRLSWLDEPFRE*
Ga0182164_10575201	3300015313	Switchgrass Phyllosphere	MMNSVELPKLDNLVKVSIYLLEPASRLCLYIEDKDVACIVIPIENCLSNPD*
Ga0182164_10814671	3300015313	Switchgrass Phyllosphere	MNSVELPKLDKLVKVSIYLLEPASRLCPYIEDKDVACIVLPMENCVSYPDQVIQVGMNLWRLPCWKNLLENSPI*
Ga0182164_10952921	3300015313	Switchgrass Phyllosphere	VNPIELPKLDKLTKVSIDLLEPARRLCPYIEDKDVACIVIPMENCVSYPNQVIQVGMNLSRLPWLG
Ga0182164_11175972	3300015313	Switchgrass Phyllosphere	ELPKMDKLVKVSIYLLELVSRLCPYIKEKDVTCIVFLMENCVSYPEEVIQVGLNLWRLSWLDEPFEEYTEMMLSG*
Ga0182136_10583581	3300015317	Switchgrass Phyllosphere	MNFVELSKLDKLVKVSIFHFELASRLCPYIEDKDVACIVILMENCVSYLEQVIQVGMNL*
Ga0182136_10822411	3300015317	Switchgrass Phyllosphere	MNSVELSKLDKLVKVSIYLLELASRLCPYIKDKDVACIVILMENYVSYPEQVIQVSMNLWRLFWMEKPFGE*
Ga0182130_10848741	3300015319	Switchgrass Phyllosphere	MNSVELPKMDKLVKVSIYLLEPASRLCPYIKDKDVTCIVFLMENYVSYPEEVIQVGMNLWRLSWLDEPFEEYTEMMLSG*
Ga0182134_11323252	3300015324	Switchgrass Phyllosphere	MNSVELPKMDKLVKVSIYLLELAGRLCPYVEDKDVTCVVIPMESCVSYSEQVIQVGVNLWRLSWLDEPFRE*
Ga0182148_10834772	3300015325	Switchgrass Phyllosphere	MNSIELPKLDKLVKVSIDLLEPASRLCPYIEDKDVACIVIPMENCVSYSDRVIQVDMNLSRLPWLEKPIRE*
Ga0182166_10395401	3300015326	Switchgrass Phyllosphere	MNPVELPKLDKLVKVSIYLLEPASRLCPYIKDKDVACIVIPMENCVSYPDQVIQVGMNL*
Ga0182166_11203741	3300015326	Switchgrass Phyllosphere	SLVKMNSVELPKMDKLVKVSIYLLELVSRLCPYIKDKDVTCIVFLMENYVSYPEGAIQVGMNL
Ga0182114_11522441	3300015327	Switchgrass Phyllosphere	MNAVELPKMDKLVKVSIFLLELASRLCPYIEDEDVTCIVIPMEDCVSYPKQVILVGMNLWRLSWLKKSFGE*
Ga0182153_10971862	3300015328	Switchgrass Phyllosphere	RMNSVELPKMDKLVKVSIYLLELASRLCPYIEDKDVTCIVILMENCVSYPD*
Ga0182131_11445431	3300015331	Switchgrass Phyllosphere	MDKLGKISIYLLELASKLCLYIEDKDVTCIVITMENCVSHPEQVIQVGMNMWRLSWLDESFRE*
Ga0182131_11542151	3300015331	Switchgrass Phyllosphere	VELPKMDKLVKVSIYLLELASRLCPYIKDKDVTCIIFLMENYVSYPEGVIQVGMNL*
Ga0182117_10581991	3300015332	Switchgrass Phyllosphere	MDKLVKVSISLLELASRLCPYIEDKDVTCIVIPMENCVSYPEEAIHVGMNLWRLPCLDEPFGE*
Ga0182117_10985041	3300015332	Switchgrass Phyllosphere	MNSVELPKLDKLVKVSIHLLEPASRLRPYIEDKDVAYIVIPMGNCVSYPEQVTQVGMNLWRLSWLEKLFVE*
Ga0182117_11485552	3300015332	Switchgrass Phyllosphere	MNSVELPKLDKQVKVSIYLLELASRFCRYTEDEDVACIVIAMENCVSYPNQVIQVGMNL*
Ga0182147_10971711	3300015333	Switchgrass Phyllosphere	MNSVELPKLDKLVKVSIDLLEPASRLCPYIEDKDVACIVIPMENYVSYPDQVIQVGMNLRLPWLEKPIRE
Ga0182132_10728201	3300015334	Switchgrass Phyllosphere	NSVELPNMDKLVKVSIFLLELASRLCPYIEDKDVACIVILMENCVSYLERVIQSV*
Ga0182132_10947181	3300015334	Switchgrass Phyllosphere	MNSVELPNMDKLVKVSIFLLELASRLCPYIEDKDVTCIVILMESCVSYSEQVIQVGVNLWRLSWLDEPFRE*
Ga0182150_10747141	3300015336	Switchgrass Phyllosphere	MNSVELPKMDKLVMVSIYLLELASRLCPYIKDKDVNCIVFLMENCVSYLEGAIQVGMNL*
Ga0182150_11364191	3300015336	Switchgrass Phyllosphere	RMNSIELPKMDKLVKVSIYLLELASRLCPYIEDKDVTCIVILMGNCVSYPEQVIRVGMNLWRLSWLEKPFGE*
Ga0182151_10627551	3300015337	Switchgrass Phyllosphere	MNSVELPKLDKLVKVSIHLLEPASRLRPYVKDRDVACIVIPMGNCVSYPEQVIQAGMNLWRLSWLEKPFGR*
Ga0182149_10765481	3300015339	Switchgrass Phyllosphere	MNSVELPKLDKLVKVSIYLLELASRFCPYTENEDVACIVIPMENCVSYPDQVIQVGMNMRLPWLEKPIRE
Ga0182149_11356001	3300015339	Switchgrass Phyllosphere	MNSVELPKLDKLVKVSIYLLELASRLCPYIEDKDVACIVIPMENCVSYPDWVIQVGMNL*
Ga0182149_11416292	3300015339	Switchgrass Phyllosphere	RMNSVELPKLDKLVKVSIHLLGPASRLRPYVKDMDVACIVIPMGNYVSYPEQVIQAGMNLWRLS*
Ga0182133_10879511	3300015340	Switchgrass Phyllosphere	MNSVELHKMDKLVKVSIYLLKLASRLCPYIKDKDVTCIVFLMEKCVSYPEGVTQVGMDL*
Ga0182115_12362041	3300015348	Switchgrass Phyllosphere	MDKLVKVSIYLLELASRLCPYIKDKDVTCIVFLIENCVSYPEGVIQFGMNLYRLSWLDELFGE*
Ga0182185_10823931	3300015349	Switchgrass Phyllosphere	MNSVELPKLDKLVKVSIHLLEPASRLLPYIEDKDVAYTVIPMGNCVSYPEQVTQVGMNLWRLSWLEKLFVE*
Ga0182185_12611881	3300015349	Switchgrass Phyllosphere	MNSVELPKMDKLVKVSIYLLELASRLCPYIEDKDVACVVILMENCVSYPKQVTLSD*
Ga0182163_10776861	3300015350	Switchgrass Phyllosphere	LVKVSIYLLELASRLCPYIEDKDVTCIVIPMESCVSYSEQVIQVGVNLWRLSWLDEPFRE
Ga0182169_12274711	3300015352	Switchgrass Phyllosphere	MNSVELPKMDKLVKVSIYLLELASRLCPYIEDKDVTCIVIPMESYVSYSEQVIQVGVNLWRLSWLDEPFRE*
Ga0182179_11440001	3300015353	Switchgrass Phyllosphere	MNSVELPKMDKLVKVSIYLLELASRLCSYIEDKDVTCIVILMENCVSYPEQVIQVGMNL*
Ga0182179_12333631	3300015353	Switchgrass Phyllosphere	MMNFVELPKLDKLVKVSIYLLEPASRLGPYIEDKDVVCIVVPMENCVSYPD*
Ga0182179_12928601	3300015353	Switchgrass Phyllosphere	MDKLGKISIYLLELASKLCLYIEDKDVTCIVITMENCVSHPEQVIQVG
Ga0182167_12651261	3300015354	Switchgrass Phyllosphere	MNSVELPKLDKLVKVSIYLLELASRFCPYTEDEDVAFIVIPMKNCVSYPDQVIQVGMNLWRLPWLEKPIIELSNMMLPGNFL
Ga0182197_10560781	3300017408	Switchgrass Phyllosphere	MNPVELPKLDKLVKVSKGLLELARGLCPYIEDKDVACIVIPMENCISYPDQVIHVGMNLSRLPWLEKPIRE
Ga0182197_10753071	3300017408	Switchgrass Phyllosphere	MNSVELPMLDKLVKVSIYLLELASIFCPYTEDEDVACIVIPMQNCVSYPNQVIQVSMNLWRLSWLEYPIRE
Ga0182199_11551051	3300017412	Switchgrass Phyllosphere	MNSVELPKMDKLVKVSIYLLKLASRLCPYIKDKDVTCIVFLMENCVSYPEVVIQVGMNL
Ga0182195_10497421	3300017414	Switchgrass Phyllosphere	MNSVELPKMDKLIKVSIFLLELASRLCPYIEYKDVACIVIPMENYVSYPERVIQL
Ga0182195_11304051	3300017414	Switchgrass Phyllosphere	MNSVELPKMDKLVKVSIYLLELASRLCPYIKDKDVTCIVFLMENCVSYLEGAIQVGMNL
Ga0182195_11892921	3300017414	Switchgrass Phyllosphere	ELPKLDKLVKVSIHLLEPASRLRPYIEGKDVACIVIPMGNCVSYPE
Ga0182213_12484812	3300017421	Switchgrass Phyllosphere	RMNSVELPKLDKLVKVSIYLLEPASRLCPYIEDKDVACIVIPMESCISYPDQVIHVGMNLSRLPWLEKPIRE
Ga0182201_10987801	3300017422	Switchgrass Phyllosphere	MNSVELPKLDKLVKVSIYLLEPASRLCPCIEDKAVACIVIPMENYASYPGQVIQVGMNLWRLPWSKKPIGA
Ga0182194_11256511	3300017435	Switchgrass Phyllosphere	MNSVELPKLDKLVKISIYLLEPASRLCPYIKDKDVACIVIPMENCVSYPDRVIQVGMNL
Ga0182200_10560421	3300017439	Switchgrass Phyllosphere	MNSVELPKLDNLVKVSIYLLEPASRLCLYIEDKDVACIVVPMENCVSYPDSVIQVGMNLXILPWLEKTIRE
Ga0182200_11493261	3300017439	Switchgrass Phyllosphere	PKMDKLVKVSMYLLELASILCPYIKDKDVTCIVFLMENCVSYPEGAIQVSMNL
Ga0182198_11442931	3300017445	Switchgrass Phyllosphere	MNSVELPKLDKQVKVLIYLLELACRFCHYTEDEDVACIVIPMENCVSYPNQVIQVGMNLWRLSWL
Ga0182216_11433771	3300017693	Switchgrass Phyllosphere	MNSVELPKLEKLVKISIYLLELASRLCPYIEDKDVACIVIPMENCISYPDQVIHVGMNLSRLPWLEKPIRE
Ga0182211_11118122	3300017694	Switchgrass Phyllosphere	MNSVELPKMDKLVKVSIYLLEPASRLCPYIKDKDVTCIIFLMENCVRYPEEVI
Ga0207684_115810371	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	KMDKLVKVSIYLLELASRLCPYIEDKDVACIVIPMENCVSYPEGVIQVGMNL
Ga0207658_109200262	3300025986	Switchgrass Rhizosphere	MNSVELPKMDKLVKVSIYLLEPASRLCPYIEDKDVTCIVILMGNCVSYPEQVIRVGMNLWRLSWLEKPFGE
Ga0268322_10210271	3300028049	Phyllosphere	MTSVELPKLDKLVKVSIYLLEPASRLCPYIEDKDVACIVLPMENCVSYPNQVIQVG
Ga0268328_10171851	3300028050	Phyllosphere	MNSVELPKLDKLVKVSIYLLEPASRLCPCIEDKAVACIVIPMENYASYPGQVIQVGMNLLRLPWLEKLIRE
Ga0268328_10278371	3300028050	Phyllosphere	MNSVELPKMDKLVKVSIFLLELASRLCLYIDDKDVTCTVIPMENCVSYPEQVIQVGMNLWRLFWLDEPFVE
Ga0268328_10336411	3300028050	Phyllosphere	RMNSVELPKLDKLVKVSIHLLGAASRLRPYIEDSDVACIVILMENCVSYPKQVIQVCMNLWRLSWLEKPFGE
Ga0268346_10005272	3300028053	Phyllosphere	MNSVELPKMEKLVKVSIYLHELASRLCPYIKDKVMTCIVFLMENCVSYPEGVIQVGMNL
Ga0268306_10139171	3300028054	Phyllosphere	MNSVELPKMDKLVKVSISLLELASRLCPYIEDKDVTCIVIPMENCVTYPEQVIQVGINLW
Ga0268338_10325102	3300028055	Phyllosphere	MDKLVKVSIYLLEPASRLCPYIKDKDVTCIVFLMENYVSYPEEVIQVGMNLWRLSWLDEPFEEYTEMMLSG
Ga0268330_10613901	3300028056	Phyllosphere	SVELSKLDKLVKVSIYLLEPASRLCPYIEDKDVACIVIPMENCVSYSDRVIQVDMNLSRLPWLEKPIRE
Ga0268332_10056441	3300028058	Phyllosphere	MNSVELPKMDKLVKVSIYLLEPASRLCPYIKDKDVTCIVFLMENYVSYPEEVIQVGMNLWRLSWLDEPFEEYTEMMLSG
Ga0268332_10213372	3300028058	Phyllosphere	MNSVELPKLDKLVKVSIYLLELASRFCPYTENEDVACIVIPMENCVSYPDQVIQVGMNLWRLPWLEKPIRG
Ga0268314_10376111	3300028061	Phyllosphere	MNSVELPKMDKLVKVSIYLLEPASRLCPYIKDKDVTCIVFLMENCVSYPEEVIQVGMNL
Ga0268355_10100421	3300028139	Phyllosphere	MNSVELPKLDKLTKVSTDLLKPASRLCPYIEDKDVACIVIPMENCVSCPDQVIQVGMNLSRLPWLEKPIRE
Ga0268348_10159211	3300028143	Phyllosphere	KLPKMDKLVKVSIYLLKLASRLCPYIKDKDVTCIVFLMENCVSYPEVVIQVGMNL
Ga0268345_10242011	3300028144	Phyllosphere	MNSVAKLDKLVKVSIYLLEPASRLCPYIEDKDMACIVILLENYISYPDQVIQVGMNLLRLPWLKKTY
Ga0268308_10022972	3300028151	Phyllosphere	LVKVSIYLLEPASRLCPCIEDKAVACIVIPMENYASYPGQVIQVGMNLLRLPWLEKLIRE
Ga0268336_10238651	3300028152	Phyllosphere	MNSAELPKMDKLVKVYIYLFELASRLCPYIEDKDVACIVIPMENCVSYPKQVYLVCM
Ga0268351_10364201	3300028246	Phyllosphere	NSVELPKLDKLVKVSIYLLELASRLCPYIEDKDVAGIVIPTENCVSCPDQVIQVGMNLSRLPWLEKPIRE
Ga0268312_10175951	3300028248	Phyllosphere	SVELPKMEKLVKVSIYLLELASRLCPYIKNKDVTCIVFLIENCVSYPEGVIQVGMNL
Ga0268312_10354491	3300028248	Phyllosphere	MNFVELSKLDKLVKVSIFHFELASRLCPYIEDKDVACIVIPMENCVSYPDQVIQVGMNLCRLPWLEKPFRE
Ga0268304_10104462	3300028256	Phyllosphere	MNSVELPKMEKLVKVSIYLLELASRLCPYIKDKDVTCIVFLMENCVSYPEGAIQVGMNL
Ga0268310_10374932	3300028262	Phyllosphere	MNSIELPKLDKLVKVSIYLLGLASRLCPYIVDKDVTYILILTENCVSYPEQVIQVIMNLWRLSCLEKPLGE
Ga0268264_110078472	3300028381	Switchgrass Rhizosphere	MNSVVLPKLDKLVNVSIYLLELASRLCPYIEDKDVTCIVIPMENCVTYPEQVIQVGINLW
Ga0268309_10067141	3300028477	Phyllosphere	MDKLVKVSIYLLELASRLCPYIKDKDVTCIVFLMEKCVSYPEGVTQVGMDL
Ga0268313_10086091	3300028523	Phyllosphere	MNSVELPKMDKLVKVSIYLLELASRLCPYIKDKDVTCIVFLMENYVSYPEGAIQVGMNL
Ga0214492_10000241	3300032464	Switchgrass Phyllosphere	MNSVELSEMDKLVKVSIYLLETASRLCPYIKDKDVTCIVFLMENCVSYPEEVIQVGMNL
Ga0214503_12734441	3300032466	Switchgrass Phyllosphere	MNSVELPKLDKLVKVYIYLLELAIRFCPYTEDEDVACIVILMENCVSYPDQVIQVGMNLRRLPWLEKPIR
Ga0214503_12797711	3300032466	Switchgrass Phyllosphere	MNSVELPKMDKLVKVSIYLLELASRLCPYIKDKVVTCIVFLMEKCVSYPEGVTQVDMDL
Ga0214488_100001913	3300032467	Switchgrass Phyllosphere	MDKLVKVSIYLLETASRLCPYIKDKDVTCIVFLMENCVSYPEEVIQVGMNL
Ga0214490_11619111	3300032502	Switchgrass Phyllosphere	PVRIISVELPKMDKLVMVSIFLLELASRLCLYIDDKDVTCTVIPMENCVSYPEQVIQVGMNLWRLFWLEKPFGE
Ga0321340_10003521	3300032550	Switchgrass Phyllosphere	MNSVEIPKMDKLVKVSIYLLETASRLCPYIKDKDVTCIVFLMENCVSYPEEVIQVGMNL
Ga0214501_10049746	3300032625	Switchgrass Phyllosphere	MDKLVKVSIYLLETASRLCPYIKDKDVTCIVFLMDNCVSYPEEVIQVGMNL
Ga0314737_10010001	3300032875	Switchgrass Phyllosphere	MNSVELPKMDKLVKVSIYLLETASRLCPYIKDKDVTCIVFLMENCVSYPEEVIQVGMNL
Ga0314751_10159262	3300032889	Switchgrass Phyllosphere	MNSVELPKMDKLVKVSIYLLELASRLCPYIEDKDVTCIVILMENYISYPEQVIQVGMNLWRLSWLDEPFVE
Ga0314758_11837791	3300033525	Switchgrass Phyllosphere	SVELSEMDKLVKVSIYLLETASRLCPYIKDKDVTCIVFLMENCVSYPEEVIQVGMNL
Ga0314761_10458731	3300033526	Switchgrass Phyllosphere	MNSVELPKLDKLENVSIYLLEPASRLCPYTKDKDVACIVIPMEDCVSYPEQFIQVSMNLWRLSWLEKLFGE
Ga0314755_10082552	3300033538	Switchgrass Phyllosphere	VRMNSVELPKLDKLENVSIYLLEPASRLCPYTKDKDVACIVIPMEDCVSYPEQFIQVSMNLWRLSWLEKLFGE

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign