Metagenome / Metatranscriptome Family F063420

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063420
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	69 residues
Representative Sequence	VAENNNHSDSATDKDTLYMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIKLRSM
Number of Associated Samples	102
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.64 %
% of genes near scaffold ends (potentially truncated)	37.21 %
% of genes from short scaffolds (< 2000 bps)	73.64 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.225 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.558 % of family members)
Environment Ontology (ENVO)	Unclassified (36.434 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.140 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.29% β-sheet: 0.00% Coil/Unstructured: 42.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF01750	HycI	36.43
PF04264	YceI	28.68
PF01455	HupF_HypC	3.88
PF01106	NifU	2.33
PF00374	NiFeSe_Hases	1.55
PF01924	HypD	1.55
PF14714	KH_dom-like	0.78
PF02844	GARS_N	0.78
PF07503	zf-HYPF	0.78
PF00483	NTP_transferase	0.78
PF08447	PAS_3	0.78
PF14720	NiFe_hyd_SSU_C	0.78
PF02548	Pantoate_transf	0.78
PF12681	Glyoxalase_2	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0680	Ni,Fe-hydrogenase maturation factor	Energy production and conversion [C]	36.43
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	28.68
COG0298	Hydrogenase maturation factor HybG, HypC/HupF family	Posttranslational modification, protein turnover, chaperones [O]	3.88
COG0694	Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain	Posttranslational modification, protein turnover, chaperones [O]	2.33
COG0374	Ni,Fe-hydrogenase I large subunit	Energy production and conversion [C]	1.55
COG0409	Hydrogenase maturation factor HypD	Posttranslational modification, protein turnover, chaperones [O]	1.55
COG3259	Coenzyme F420-reducing hydrogenase, alpha subunit	Energy production and conversion [C]	1.55
COG0068	Hydrogenase maturation factor HypF (carbamoyltransferase)	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG0151	Phosphoribosylamine-glycine ligase	Nucleotide transport and metabolism [F]	0.78
COG0413	Ketopantoate hydroxymethyltransferase	Coenzyme transport and metabolism [H]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	71.32 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	37.21 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	19.38 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	37.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.38 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	37.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.38 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.38 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	13.18 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	11.63 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.38 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	12.40 %
unclassified Acidipila	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila	11.63 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.38 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	12.40 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	11.63 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.78 %
Unclassified	root	N/A	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001151\|JGI12713J13577_1019005	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300002245\|JGIcombinedJ26739_101433195	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	584	Open in IMG/M
3300003505\|JGIcombinedJ51221_10008913	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	3202	Open in IMG/M
3300003551\|Ga0005498J51100_110353	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	524	Open in IMG/M
3300004080\|Ga0062385_10067890	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300004091\|Ga0062387_100940515	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300005332\|Ga0066388_100380819	All Organisms → cellular organisms → Bacteria	2057	Open in IMG/M
3300005434\|Ga0070709_10009556	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5353	Open in IMG/M
3300005435\|Ga0070714_100041504	All Organisms → cellular organisms → Bacteria	3883	Open in IMG/M
3300005534\|Ga0070735_10245424	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300005538\|Ga0070731_10008078	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	8101	Open in IMG/M
3300005541\|Ga0070733_10076875	All Organisms → cellular organisms → Bacteria	2109	Open in IMG/M
3300005541\|Ga0070733_10126355	All Organisms → cellular organisms → Bacteria	1647	Open in IMG/M
3300005542\|Ga0070732_10810052	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005591\|Ga0070761_10002599	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	11028	Open in IMG/M
3300005591\|Ga0070761_10964686	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300005602\|Ga0070762_10011940	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	4387	Open in IMG/M
3300005602\|Ga0070762_11274458	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005610\|Ga0070763_10000469	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11142	Open in IMG/M
3300005841\|Ga0068863_100446268	All Organisms → cellular organisms → Bacteria → Acidobacteria	1269	Open in IMG/M
3300005921\|Ga0070766_10302557	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300006052\|Ga0075029_100886883	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300006162\|Ga0075030_100985026	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	664	Open in IMG/M
3300006893\|Ga0073928_10045518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	4008	Open in IMG/M
3300007982\|Ga0102924_1215149	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300009552\|Ga0116138_1191900	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	564	Open in IMG/M
3300009624\|Ga0116105_1024181	All Organisms → cellular organisms → Bacteria → Acidobacteria	1291	Open in IMG/M
3300010341\|Ga0074045_10171447	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1464	Open in IMG/M
3300010360\|Ga0126372_10814135	All Organisms → cellular organisms → Bacteria → Acidobacteria	927	Open in IMG/M
3300011120\|Ga0150983_12860213	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300011120\|Ga0150983_14193221	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	6918	Open in IMG/M
3300012285\|Ga0137370_10223315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1110	Open in IMG/M
3300012361\|Ga0137360_11793230	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300012929\|Ga0137404_11436825	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	637	Open in IMG/M
3300012930\|Ga0137407_11859265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300012958\|Ga0164299_10589049	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300012984\|Ga0164309_10557086	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300013297\|Ga0157378_10432783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1302	Open in IMG/M
3300013306\|Ga0163162_11328756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	817	Open in IMG/M
3300014501\|Ga0182024_10173531	All Organisms → cellular organisms → Bacteria → Acidobacteria	2988	Open in IMG/M
3300015374\|Ga0132255_103193275	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300016294\|Ga0182041_10050991	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2800	Open in IMG/M
3300017822\|Ga0187802_10228840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300017936\|Ga0187821_10412981	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	554	Open in IMG/M
3300018017\|Ga0187872_10482328	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	516	Open in IMG/M
3300018019\|Ga0187874_10133432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1059	Open in IMG/M
3300018034\|Ga0187863_10123629	All Organisms → cellular organisms → Bacteria → Acidobacteria	1446	Open in IMG/M
3300018040\|Ga0187862_10424934	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	811	Open in IMG/M
3300018047\|Ga0187859_10523933	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300020021\|Ga0193726_1377898	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300020579\|Ga0210407_10211728	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	1507	Open in IMG/M
3300020580\|Ga0210403_10057140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3125	Open in IMG/M
3300020580\|Ga0210403_10904309	All Organisms → cellular organisms → Bacteria → Acidobacteria	696	Open in IMG/M
3300020582\|Ga0210395_10000003	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	446828	Open in IMG/M
3300020582\|Ga0210395_10003069	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12857	Open in IMG/M
3300020582\|Ga0210395_10073818	All Organisms → cellular organisms → Bacteria → Acidobacteria	2511	Open in IMG/M
3300020582\|Ga0210395_10102842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2114	Open in IMG/M
3300020583\|Ga0210401_10038822	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	4520	Open in IMG/M
3300020583\|Ga0210401_10100407	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2719	Open in IMG/M
3300021171\|Ga0210405_10228964	All Organisms → cellular organisms → Bacteria	1472	Open in IMG/M
3300021171\|Ga0210405_10245582	All Organisms → cellular organisms → Bacteria → Acidobacteria	1417	Open in IMG/M
3300021171\|Ga0210405_10872604	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300021181\|Ga0210388_10728295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300021181\|Ga0210388_11057227	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300021401\|Ga0210393_10540423	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	952	Open in IMG/M
3300021401\|Ga0210393_10557263	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	936	Open in IMG/M
3300021404\|Ga0210389_10311314	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	1235	Open in IMG/M
3300021406\|Ga0210386_10038172	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	3787	Open in IMG/M
3300021407\|Ga0210383_10000068	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	115506	Open in IMG/M
3300021407\|Ga0210383_10000262	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	51228	Open in IMG/M
3300021407\|Ga0210383_10525804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1021	Open in IMG/M
3300021420\|Ga0210394_10245937	All Organisms → cellular organisms → Bacteria → Acidobacteria	1565	Open in IMG/M
3300021432\|Ga0210384_10488176	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300021475\|Ga0210392_10080479	All Organisms → cellular organisms → Bacteria → Acidobacteria	2095	Open in IMG/M
3300021477\|Ga0210398_10409767	Not Available	1105	Open in IMG/M
3300021477\|Ga0210398_10502224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	987	Open in IMG/M
3300021478\|Ga0210402_10012837	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7196	Open in IMG/M
3300022530\|Ga0242658_1042289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	932	Open in IMG/M
3300022557\|Ga0212123_10445007	All Organisms → cellular organisms → Bacteria → Acidobacteria	856	Open in IMG/M
3300022716\|Ga0242673_1028248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300022716\|Ga0242673_1040553	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	752	Open in IMG/M
3300022717\|Ga0242661_1009610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1366	Open in IMG/M
3300022730\|Ga0224570_108100	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	650	Open in IMG/M
3300025931\|Ga0207644_10929531	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	729	Open in IMG/M
3300027109\|Ga0208603_1008115	All Organisms → cellular organisms → Bacteria	1739	Open in IMG/M
3300027729\|Ga0209248_10135598	All Organisms → cellular organisms → Bacteria → Acidobacteria	737	Open in IMG/M
3300027783\|Ga0209448_10165599	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300027842\|Ga0209580_10578350	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300027853\|Ga0209274_10001221	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	13414	Open in IMG/M
3300027853\|Ga0209274_10528751	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300027855\|Ga0209693_10382856	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	680	Open in IMG/M
3300027867\|Ga0209167_10220672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1013	Open in IMG/M
3300027867\|Ga0209167_10264481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300027869\|Ga0209579_10031727	All Organisms → cellular organisms → Bacteria → Acidobacteria	2880	Open in IMG/M
3300027884\|Ga0209275_10123576	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300027895\|Ga0209624_10129667	All Organisms → cellular organisms → Bacteria	1660	Open in IMG/M
3300027905\|Ga0209415_10037177	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	6743	Open in IMG/M
3300027905\|Ga0209415_11074625	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	526	Open in IMG/M
3300029943\|Ga0311340_10125564	All Organisms → cellular organisms → Bacteria → Acidobacteria	2755	Open in IMG/M
3300029943\|Ga0311340_10524732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1053	Open in IMG/M
3300029944\|Ga0311352_10997657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300030053\|Ga0302177_10322708	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300030503\|Ga0311370_10282306	All Organisms → cellular organisms → Bacteria	2163	Open in IMG/M
3300030548\|Ga0210252_11045434	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	576	Open in IMG/M
3300030577\|Ga0210260_10342866	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	539	Open in IMG/M
3300030596\|Ga0210278_1059910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300030596\|Ga0210278_1101549	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300030597\|Ga0210286_1105825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300030730\|Ga0307482_1032638	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300030730\|Ga0307482_1090583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300030738\|Ga0265462_10429654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	916	Open in IMG/M
3300030743\|Ga0265461_10330543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1099	Open in IMG/M
3300030743\|Ga0265461_11855761	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	678	Open in IMG/M
3300031057\|Ga0170834_107869713	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	599	Open in IMG/M
3300031231\|Ga0170824_100314391	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300031231\|Ga0170824_116084687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	536	Open in IMG/M
3300031231\|Ga0170824_116461742	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	4296	Open in IMG/M
3300031231\|Ga0170824_126199033	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300031715\|Ga0307476_10438758	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300031720\|Ga0307469_12171601	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300031754\|Ga0307475_10599210	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	882	Open in IMG/M
3300031890\|Ga0306925_10025920	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	5925	Open in IMG/M
3300031896\|Ga0318551_10328774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	863	Open in IMG/M
3300031897\|Ga0318520_10256135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1046	Open in IMG/M
3300031947\|Ga0310909_10303242	All Organisms → cellular organisms → Bacteria → Acidobacteria	1339	Open in IMG/M
3300032515\|Ga0348332_14004480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300032770\|Ga0335085_10077293	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	4382	Open in IMG/M
3300032829\|Ga0335070_10067422	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	3856	Open in IMG/M
3300033433\|Ga0326726_11025198	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.35%
Host-Associated	Host-Associated	4.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.40%
Aquatic	Environmental → Aquatic	13.95%
Plants	Host-Associated → Plants	4.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.97%
Freshwater	Environmental → Aquatic → Freshwater	10.08%
Peat	Environmental → Terrestrial → Peat	4.65%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.33%
Sediment	Environmental → Aquatic → Sediment	1.55%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.59%
Loam	Environmental → Terrestrial → Soil → Loam	16.28%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.08%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.10%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.65%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.55%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.20%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.10%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.10%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.88%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.88%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.55%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.55%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.78%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.78%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.78%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001151	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300003551	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF147 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022730	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU2	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030548	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR016SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030577	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO131-ARE010SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030596	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO085SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030597	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE046SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12713J13577_10190051	3300001151	Forest Soil	MAMELYKDGNPVGTDKETLYMLGGAALILFGTGLILSNPTVRRYLGQLGVGSLLTAALPDLDRYL
JGIcombinedJ26739_1014331952	3300002245	Forest Soil	VAIFSEDXDFGSNKDTLYMLGGAALILFGTGMILSNPVVRRYLGQLGVGNLLLAALPDVDRYMKLRAM*
JGIcombinedJ51221_100089131	3300003505	Forest Soil	MEFSEGTNNIGSDKDTLYMLGGAALILFGTGLILSNPIVRRYLGQLGVGNLVLAALPDVDRYMKLRAM*
Ga0005498J51100_1103532	3300003551	Forest Soil	VAENNNHSDSATDKDTLYMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM*
Ga0062385_100678903	3300004080	Bog Forest Soil	MQQNSNDSARDDRDTLLMLSGVALIVFGAGLILSNPIARRYLGQFGIGNLAQSALPDLDRYLKMRSM*
Ga0062387_1009405152	3300004091	Bog Forest Soil	VAENNNHSDAGTDKDTLFMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIKLRSM*
Ga0066388_1003808192	3300005332	Tropical Forest Soil	VAMNLAGNGKDNSFSDKDTLYMLSGVALIVFGAGLILSNPVVRRYMGQLGIGNLAAAALPDVDRYFRLRQM*
Ga0070709_100095562	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VAENNNHFEPGTDKDTLFMLGGVACIVFGAGLILSNPIIRRYLGQMGVGSLIHGALPDLDRYIKLRSM*
Ga0070714_1000415041	3300005435	Agricultural Soil	VAENNNHFEPGTDKDTLFMLGGVACIVFGAGLILSNPIIRRYLGQVGVGSLIQGALPDLDRYIKLRSM*
Ga0070735_102454242	3300005534	Surface Soil	VAIFSEDAEFGSNKDTLYMLGGAALILFGTGMILSNPVVRRYLGQLGVGNLLLAALPDVDRYMKLRAM*
Ga0070731_100080787	3300005538	Surface Soil	VSENNNHSDSGTDKDNLYMLGGLACIVFGAGLILSNPIVRKYLGQMGVGSLVQGALPDLDRYIKLRSM*
Ga0070733_100768755	3300005541	Surface Soil	MRGDTAVAMELSETTNHNGTDKDTLYMLGGAALILFGTGLILSNPLIRRYLSQLGVGNVMQAALPDIDRYLKMRSM*
Ga0070733_101263552	3300005541	Surface Soil	VAENNNHSDSGTDKDTLYMLGGVAFIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM*
Ga0070732_108100522	3300005542	Surface Soil	MGFSEAANHNGSDKDTLYMLGGAALILFGTGLILSNPIVRRYLGQLGVGNLLLAALPDVDRYMKLRAM*
Ga0070761_100025999	3300005591	Soil	VAENNNHSDSGTDKDTLYMLGGVACIVFGAGLILSNPIIRRYLGQIGVGSLVQGALPDLDRYIKLRSM*
Ga0070761_109646861	3300005591	Soil	MQENSNGSARDDRDTLFMLSGVALIVFGAGLILSNPIARRYLGQFGIGNLAQSALPDLDRYLKMRSM*
Ga0070762_100119405	3300005602	Soil	VTENNNHSDSATDKDTLYMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM*
Ga0070762_112744582	3300005602	Soil	VAENNNHSDAGTDKDTLFMLGGVAFIVFGAGLILSNPIVRRYMGQIGVGNLVQAALPDLDRYIKLRSM*
Ga0070763_1000046911	3300005610	Soil	VAMEFSEGTNNIGNDKDTLYMLGGAALILFGTGLILSNPIVRRYLGQLGVGNLVLAALPDVDRYMKLRAM*
Ga0068863_1004462682	3300005841	Switchgrass Rhizosphere	MAMEFSESANNSGTDKDTLYMLGGAALIMFGTGLILSNPMVRRYLGQLGVGNLMQAALPDVDRYLKSRNM*
Ga0070766_103025572	3300005921	Soil	VAIFEDAEFGSNKDTLYMLGGAALILFGTGMILSNPVVRRYLGQIGVGNLLLAALPDVDRYMKLRAM*
Ga0075029_1008868831	3300006052	Watersheds	VAENGRHTGDMNGSTDKDTLYMLSGVALIVFGAGLILSNPLVRKYLGQVGVGNLVQNALPDLDRYLR
Ga0075030_1009850261	3300006162	Watersheds	VAMEFSDTNHNGNGTDKDTLYMLSGAALILFGAGLILSNPVVRKYLGQMGVGNLVGAALPDVD
Ga0073928_100455182	3300006893	Iron-Sulfur Acid Spring	VAIFSEDADFGSNKDTLYMLGGAALILFGTGMILSNPVVRRYLGQLGVGNLLLAALPDVDRYMKLRAM*
Ga0102924_12151492	3300007982	Iron-Sulfur Acid Spring	MREETAVAIFEDAEFGSNKDTLYMLGGAALILFGTGMILSNPVVRRYLGQIGVGNLLLAALPDVDRYMKLRAM*
Ga0116138_11919001	3300009552	Peatland	HSDSSTDKDTLYMLGGVAFIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM*
Ga0116105_10241812	3300009624	Peatland	VAENNNHSDSSTDKDTLYMLGGVAFIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM*
Ga0074045_101714471	3300010341	Bog Forest Soil	VVENNNHSDSVTDKDTLFMLSGVAFIVFGAGLILSNPLVRRYLGQVGVGNLVQGALPDLDRYIKLRSM*
Ga0126372_108141352	3300010360	Tropical Forest Soil	MDLAQHTNGNSSMTDKDTLYMLSGVALIVFGAGLILSNPLIRRYLGQVGVGSLAQAALPDIDRYLK
Ga0150983_128602132	3300011120	Forest Soil	MRGDCVAMEFSEGTNNIGNDKDTLYMLGGAALILFGTGLILSNPIVRRYLGQLGVGNLVLAALPDVDRYMKLRAM*
Ga0150983_141932217	3300011120	Forest Soil	VAENNNHSDSATDKDTLYMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIKLRSM*
Ga0137370_102233152	3300012285	Vadose Zone Soil	VAENNNHFDTGTDKDTLFMLGGVACIVFGAGLILSNPIIRRYLGQMGVGNMVQNALPDLDRYIKLRSM*
Ga0137360_117932302	3300012361	Vadose Zone Soil	MEFSEGTNNIGSDKDTLYMLGGAALILVGTGLILSNPIVRRYLGQLGVGNLVLAALPDVDRYMKLRAM*
Ga0137404_114368251	3300012929	Vadose Zone Soil	VSENNNHSDSGTDKDTLYMLGGVACIVFGAGLILSNPIVRKYLGQMGVGSLVQGALPDLDRYIKLRSM*
Ga0137407_118592651	3300012930	Vadose Zone Soil	TPTDKDTLMLLSGAAFIVFRAGLILSNPVVRHYLGQIGVGSLVQGALPDLDRYIKLRSM*
Ga0164299_105890491	3300012958	Soil	MENGNGSFNDKDTLFMLGGVALIVFGAGLILTNPIARRYMGQLGVGDLASLALPDLDHYLKLRAM*
Ga0164309_105570862	3300012984	Soil	GTDKDTLYMLGGAALIMFGTGLILSNPMVRRYLGQLGVGNLMQAALPDGIHYLKLRNM*
Ga0157378_104327831	3300013297	Miscanthus Rhizosphere	NNNHFEAGTDKDTLFMLGGVACIVFGAGLILSNPIIRRYLGQMGVGSLIQGALPDLDRYIKLRSM*
Ga0163162_113287561	3300013306	Switchgrass Rhizosphere	NGSFNDKDTLFMLGGVALIVFGAGLILTNPIARRYLGQLGVGDLASLALPDLDGYLKLRAM*
Ga0182024_101735313	3300014501	Permafrost	VAIFSEDAEFGSNKDTLYMLGGAALILFGTGMILSNPVVRRYLGQIGVGNLLLAALPDVDRYMKLRAM*
Ga0132255_1031932751	3300015374	Arabidopsis Rhizosphere	VAENNNHFEPGTDKDTLFMLGGVACIVFGAGLILSNPIIRRYLGQMGVGSLIQGALPDLDRYINLRSM*
Ga0182041_100509911	3300016294	Soil	NNHSDSATDRDTLFLLSGVAFIVFGAGLILSNPLVRRYMGQVGIGNLAMNALPDLDRYMKLRSM
Ga0187802_102288402	3300017822	Freshwater Sediment	MAFSESVDFGNDKETLYMLGGAALILFGTGLILSNPTVRRYLGQLGVGNLLLAALPDVDRYMKLRAM
Ga0187821_104129811	3300017936	Freshwater Sediment	ENNNHFEPWTDKDTLFMLGGVACIVFGAGLILSNPIIRRYLGQMGVGSLIQGALPDLDRYIKLRSM
Ga0187872_104823281	3300018017	Peatland	HSDSSTDKDTLYMLGGVAFIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM
Ga0187874_101334321	3300018019	Peatland	NNNHSDSSTDKDTLYMLGGVAFIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM
Ga0187863_101236293	3300018034	Peatland	VAENNNHSDSSTDKDTLYMLGGVAFIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM
Ga0187862_104249341	3300018040	Peatland	WCSRWSTQFCRNSSKKSESSFRKEIIVAENNNHSDSSTDKDTLYMLGGVAFIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM
Ga0187859_105239332	3300018047	Peatland	VAENGQHTNGDLTTDRDTLFMLSGVAFIVFGAGLILSNPLVRRYMGQAGIGSLVQAALPDLDRYIRLRAM
Ga0193726_13778982	3300020021	Soil	VAENNNHSDIGTDKDTLFMLGGVAFIVFGAGLILSNPIVRRYMGQIGVGNLVQAALPDLDRYIKLR
Ga0210407_102117283	3300020579	Soil	VAENNNHSDAGTDKDTLFMLGGVAFIVFGAGLILSNPIVRRYMGQIGVGNLVQAALPDLDRYIKLRSM
Ga0210403_100571405	3300020580	Soil	VTENNNHSDSATDKDTLYMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM
Ga0210403_109043091	3300020580	Soil	CSPWSKRFCRNSSKKSETSFRKEILVAENNNHSDAGTDKDTLFMLGGVAFIVFGAGLILSNPIVRRYMGQIGVGNLVQAALPDLDRYIKLRSM
Ga0210395_1000000391	3300020582	Soil	VAENNNHSDSATDKDTLYMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIKLRSM
Ga0210395_100030692	3300020582	Soil	VAENNNHSDSATDKDTLYMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM
Ga0210395_100738183	3300020582	Soil	VAENNNHSDAGTDKDTLFMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIKLRSM
Ga0210395_101028422	3300020582	Soil	VSENNNHSDSGTDKDTLYMLGGLACIVFGAGLILSNPIVRKYLGQMGVGSLVQGALPDLDRYIKLRSM
Ga0210401_100388222	3300020583	Soil	VAMEFSEGTNNIGSDKDTLYMLGGAALILFGTGLILSNPIVRRYLGQLGVGNLVLAALPDVDRYMKLRAM
Ga0210401_101004072	3300020583	Soil	VAIFSEDAEFGSNKDTLYMLGGAALILFGTGMILSNPVVRRYLGQLGVGNLLLAALPDVDRYMKLRAM
Ga0210405_102289643	3300021171	Soil	MGFSEAANHNGSDKDTLYMLGGAALILFGTGLILSNPLVRRYLGQLGVGNLLLAALPDVDRYMKLRAM
Ga0210405_102455822	3300021171	Soil	MAVDISEYRNDPGSDKDTLFLLSGAALILFGAGLILSNPLVRRYLGRLGVGNLVQAALPDLDKYLKLRAM
Ga0210405_108726041	3300021171	Soil	VAIFEDAEFGSNKDTLYMLGGAALILFGTGMILSNPVVRRYLGQIGVGNLLLAALPDVDRYMKLRAM
Ga0210388_107282951	3300021181	Soil	AIAATISASFSKETNVAENVNNSDSGMDKDTLFMLGGVAFMVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIKLRSM
Ga0210388_110572271	3300021181	Soil	VAMDLSEDTNHSGTDKDTLYMLGGAALILFGTGLILSNPIVRRYLGQLGVGNILTAAIPDVDRYLKL
Ga0210393_105404232	3300021401	Soil	VAENVNNSDSGMDKDTLFMLGGVAFMVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDL
Ga0210393_105572632	3300021401	Soil	VAENNNHSDSSTDKDTLYMLGGVACIVFGAGLILSNPIVRRYLGQMGVGNLVQGALPDLDRYIRLRSM
Ga0210389_103113141	3300021404	Soil	VAENHNHSDSATDRDTLFMLSGVAFMVFGAGLILSNPLVRRYLGGVGIGSLAQAALPDLD
Ga0210386_100381723	3300021406	Soil	MEFSEGTNNIGSDKDTLYMLGGAALILFGTGLILSNPIVRRYLGQLGVGNLVLAALPDVDRYMKLRAM
Ga0210383_100000681	3300021407	Soil	VTENNNHSDSATDKDTLYMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALP
Ga0210383_100002621	3300021407	Soil	EIIVTENNNHSDSATDKDTLYMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM
Ga0210383_105258041	3300021407	Soil	AATISASFSKETNVAENVNNSDSGMDKDTLFMLGGVAFMVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIKLRSM
Ga0210394_102459372	3300021420	Soil	VAMEFSEGTNNIGNDKDTLYMLGGAALILFGTGLILSNPIVRRYLGQLGVGNLVLAALPDVDRYMKLRAM
Ga0210384_104881762	3300021432	Soil	MAVDISECRNDLGSDKDTLFMLSGAALILFGTGLILSNPLVRRYLGRLGVGNLVQAALPDLDKYLKLRAM
Ga0210392_100804791	3300021475	Soil	SGTDKDTLYMLGGLACIVFGAGLILSNPIVRKYLGQMGVGSLVQGALPDLDRYIKLRSM
Ga0210398_104097671	3300021477	Soil	VENGNHVNGGTDKDTLMMLSGVAFIVFGAGLILSNPLVRKYLGQVGIGNLAQAALPD
Ga0210398_105022242	3300021477	Soil	NSKKSERSFRKETIVAENNNHSDAGTDKDTLFMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIKLRSM
Ga0210402_100128376	3300021478	Soil	VAENDNHFDAGTDKDTLFMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM
Ga0242658_10422892	3300022530	Soil	GTSRKETIVSENNNHSDSGTDKDTLYMLGGVACIVFGAGLILSNPIVRKYLGQMGVGSLVQGALPDLDRYIKLRSM
Ga0212123_104450072	3300022557	Iron-Sulfur Acid Spring	VAIFSEDADFGSNKDTLYMLGGAALILFGTGMILSNPVVRRYLGQLGVGNLLLAALPDVDRYMKLRAM
Ga0242673_10282481	3300022716	Soil	KSESSFRKESIVAENNNHSDSATDKDTLYMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM
Ga0242673_10405532	3300022716	Soil	VTENNNHSDSATDKDTLYMLAGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGVLPDLDRYIRLRSM
Ga0242661_10096103	3300022717	Soil	VTENNNHSDSATDKDTLYMLGGVACIVIGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM
Ga0224570_1081002	3300022730	Rhizosphere	VAENNNHSDSGTDKDTLYMLGGLAFIVFGAGLILSNPIVRKYLGQMGVGSLVQGALPDLDRYIKLRSM
Ga0207644_109295311	3300025931	Switchgrass Rhizosphere	MAMEFSESANNSGTDKDTLYMLGGAALIMFGTGLILSNPMVRRYLGQLGVGNLMQAALPDVD
Ga0208603_10081153	3300027109	Forest Soil	MEFSEGTNNIGNDKDTLYMLGGAALILFGTGLILSNPIVRRYLGQLGVGNLVLAALPDVDRYMKLRAM
Ga0209248_101355982	3300027729	Bog Forest Soil	MQQNSNDSARDDRDTLLMLSGVALIVFGAGLILSNPIARRYLGQFGIGNLAQSALPDLDRYLKMRSM
Ga0209448_101655991	3300027783	Bog Forest Soil	VAENNNHSDAGTDKDTLFMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLD
Ga0209580_105783502	3300027842	Surface Soil	MGFSEAANHNGSDKDTLYMLGGAALILFGTGLILSNPIVRRYLGQLGVGNLLLAALPDVDRYMKLRAM
Ga0209274_100012214	3300027853	Soil	VAENNNHSDSGTDKDTLYMLGGVACIVFGAGLILSNPIIRRYLGQIGVGSLVQGALPDLDRYIKLRSM
Ga0209274_105287512	3300027853	Soil	MQENSNGSARDDRDTLFMLSGVALIVFGAGLILSNPIARRYLGQFGIGNLAQSALPDLDRYLKMRSM
Ga0209693_103828562	3300027855	Soil	KGFCRNSSKKSESSFRKEIIVTENNNHSDSATDKDTLYMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM
Ga0209167_102206722	3300027867	Surface Soil	MADKTLRTSMRGETAVAMELSETTNHNGTDKDTLYMLGGAALILFGTGLILSNPLIRRYLSQLGVGNVMQAALPDIDRYLKMRSM
Ga0209167_102644812	3300027867	Surface Soil	VAENNNHSDSGTDKDTLYMLGGVAFIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM
Ga0209579_100317275	3300027869	Surface Soil	VSENNNHSDSGTDKDNLYMLGGLACIVFGAGLILSNPIVRKYLGQMGVGSLVQGALPDLDRYIKLRSM
Ga0209275_101235762	3300027884	Soil	MRGDCVAMEFSEGTNNIGNDKDTLYMLGGAALILFGTGLILSNPIVRRYLGQLGVGNLVLAALPDVDRYMKLRAM
Ga0209624_101296673	3300027895	Forest Soil	VAIFEDVEFGSNKDTLYMLGGAALILFGTGMILSNPVVRRYLGQIGVGNLLLAALPDVDRYMKLRAM
Ga0209415_100371777	3300027905	Peatlands Soil	VAENNNHSDSGTDKDTLYMLGGVACIVFGAGLILSNPIIRRYLGQIGVGSLVQGALPDLDRYIRLRSM
Ga0209415_110746252	3300027905	Peatlands Soil	VAENNNYSDSATDKDTLFMLSGVAFIVFGAGLILSNPLVRRYLGQVGIGNLVQGALPDLDRYIKLRSM
Ga0311340_101255644	3300029943	Palsa	MQENSNDSARDDRDTLFMLSGVALIVFGAGLILSNPIARRYLSKFGIGNLAQSTLPDLDRYLKMRSM
Ga0311340_105247322	3300029943	Palsa	MELSVNTDHVGSDKDTLYMLSGAALILFGTGLILSNPVVRRYLGQLGVGNLVQAALPDFDRYLKMRTM
Ga0311352_109976572	3300029944	Palsa	NDSARDDRDTLFMLSGVALIVFGAGLILSNPIARRYLSKFGIGNLAQSTLPDLDRYLKMRSM
Ga0302177_103227081	3300030053	Palsa	MELSEHTNGVGTDKDTLYMLGGAALILFGAGLILSNPHVRRYLGQLGVGNLIGAALPDVDRYLRL
Ga0311370_102823061	3300030503	Palsa	VDETNHSNNHPGTDKDTLYMLGGVALIVFGAGLILSNPLIRRYLGQVGIGNLAQAALPDLDRYLK
Ga0210252_110454341	3300030548	Soil	SESSFRKEIIVAENNNHSDSATDKDTLYMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM
Ga0210260_103428661	3300030577	Soil	ENNNHSDSATDKDTLYMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM
Ga0210278_10599102	3300030596	Soil	HLERRFIVAENDNHSDSSTDKDTLYMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM
Ga0210278_11015492	3300030596	Soil	MQGNGDGSSRDDRDTFFMLSGVALIVFGAGLILSNPIARRYMGQFGIGNLAQSALPDLDRYLKIRSM
Ga0210286_11058252	3300030597	Soil	IRGHLERRFIVAENDNHSDSSTDKDTLYMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM
Ga0307482_10326382	3300030730	Hardwood Forest Soil	VAIFSESADFGSNKDTLYMLGGAALILFGTGMILSNPVVRRYLGQLGVGNLLLAALPDVDRYMKLRAM
Ga0307482_10905832	3300030730	Hardwood Forest Soil	FRKESIVAENNNHSDSATDKDTLYMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM
Ga0265462_104296542	3300030738	Soil	VAENDNHSDSSTDKDTLYMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM
Ga0265461_103305433	3300030743	Soil	SSFRKEIIVAENNNHSDSATDKDTLYMLGGVACIVFGAGLILSNPIVRRYLGQMGVGSLVQGALPDLDRYIRLRSM
Ga0265461_118557612	3300030743	Soil	RDEQNSAGTRINNQADHFRKETNVAENNNHSDSGTDKDTLYMLGGLAFIVFGAGLILSNPIVRKYLGQMGVGSLVQGALPDLDRYIKLRSM
Ga0170834_1078697132	3300031057	Forest Soil	ENNNQNDSGTDKDTLYMLGGVACIVFGAGLILSNPIVRRYLGQMGVGNLVQGALPDLDRYIKLRSM
Ga0170824_1003143911	3300031231	Forest Soil	VAENNNHSDAGTDKDTLFMLGGVAFIVFGAGLILSNPIVRRYMGQLGVGNLVQAALPDLDRYIKLRAM
Ga0170824_1160846872	3300031231	Forest Soil	VSENNNHSDSGTDKDTLYMLGGVACIVFGAGLILANPIVRKYLGQMGVGSLVQGALPDLDRYIKLRSM
Ga0170824_1164617424	3300031231	Forest Soil	VQENNNQSDSGTDKDTLYMLGGVACIVFGAGLILSNPIVRRYLGQMGVGNLVQGALPDLDRYIKLRSM
Ga0170824_1261990332	3300031231	Forest Soil	VSENNNHSDSGTDKDTLYMLGGVACIVFGAGLILSNPIVRKYLGQMGVGSLVQGALPDLDRYIKLRSM
Ga0307476_104387582	3300031715	Hardwood Forest Soil	VAIFSEDAEFGSNKDTLFMLGGAALILFGTGMILSNPVVRRYLGQLGVGNLLLAALPDVDRYMKLRAM
Ga0307469_121716011	3300031720	Hardwood Forest Soil	VSGNNNHSDSATDRDTLFMLSGVAFMVFGAGLILSNPLVRKYLGGVGIGNLAQAALPDLD
Ga0307475_105992101	3300031754	Hardwood Forest Soil	MQSHEENNHSGADKDTLYMLGGAALILFGAGLILSNPMVRRYLGQMGVGNLVGAALPDIDRYL
Ga0306925_100259207	3300031890	Soil	VAESNNHSDSATDRDTLFLLSGVAFIVFGAGLILSNPLVRRYMGQVGIGNLAMNALPDLDRYMKLRSM
Ga0318551_103287741	3300031896	Soil	VAESNNHSDSATDRDTLFLLSGVAFIVFGAGLILSNPLVRRYMGQVGIGNLAMNALPDLDRYMK
Ga0318520_102561351	3300031897	Soil	KEIAVAESNNHSDSATDRDTLFLLSGVAFIVFGAGLILSNPLVRRYMGQVGIGNLAMNALPDLDRYMKLRSM
Ga0310909_103032423	3300031947	Soil	KYKEIAVAESNNHSDSATDRDTLFLLSGVAFIVFGAGLILSNPLVRRYMGQVGIGNLAMNALPDLDRYMKLRSM
Ga0348332_140044802	3300032515	Plant Litter	VAENDNHSDSSTDKDTLYMLGGVACIVFGAGLILSNPIVRRDLGQMGVGSLVQGALPDLDRYIRLRSM
Ga0335085_100772936	3300032770	Soil	VAENNNHSDAGTDKDTLFMLGGVAFIVFGAGLILSNPIIRRYLGQMGVGSLVQGALPDLDRYIKLRSM
Ga0335070_100674222	3300032829	Soil	VAENNNHSESTDRDTLFMLSGVAFIVFGAGLILSNPLVRRYMGQMGLGNIAQAALPDLDRYMRLRAM
Ga0326726_110251982	3300033433	Peat Soil	VAENNNHFEPGTDKDTLFMLGGVACIVFGAGLILSNPIIRRYLGQMGVGSLVQGALPDLDRYIKLRSM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063420

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences