Metagenome / Metatranscriptome Family F063424

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063424
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	44 residues
Representative Sequence	MAKGKGGAPAPKKTGDNSDRKNGKANKKRPKIFDAIKRRLVTK
Number of Associated Samples	78
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	81.20 %
% of genes near scaffold ends (potentially truncated)	6.20 %
% of genes from short scaffolds (< 2000 bps)	47.29 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Duplodnaviria (50.388 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (34.108 % of family members)
Environment Ontology (ENVO)	Unclassified (61.240 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 11.27% Coil/Unstructured: 88.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF02467	Whib	13.18
PF00271	Helicase_C	8.53
PF01551	Peptidase_M23	6.20
PF00877	NLPC_P60	3.10
PF07691	PA14	2.33
PF09723	Zn-ribbon_8	2.33
PF08282	Hydrolase_3	2.33
PF02867	Ribonuc_red_lgC	2.33
PF01050	MannoseP_isomer	1.55
PF00011	HSP20	1.55
PF00462	Glutaredoxin	1.55
PF07508	Recombinase	1.55
PF05063	MT-A70	1.55
PF01844	HNH	1.55
PF02511	Thy1	0.78
PF04984	Phage_sheath_1	0.78
PF11238	DUF3039	0.78
PF13392	HNH_3	0.78
PF05305	DUF732	0.78
PF09834	DUF2061	0.78
PF04138	GtrA	0.78
PF01478	Peptidase_A24	0.78
PF02709	Glyco_transf_7C	0.78
PF03332	PMM	0.78
PF00145	DNA_methylase	0.78
PF05050	Methyltransf_21	0.78
PF03237	Terminase_6N	0.78
PF01471	PG_binding_1	0.78
PF01467	CTP_transf_like	0.78
PF07659	DUF1599	0.78
PF13692	Glyco_trans_1_4	0.78
PF00154	RecA	0.78
PF13640	2OG-FeII_Oxy_3	0.78
PF00166	Cpn10	0.78
PF05869	Dam	0.78
PF13649	Methyltransf_25	0.78
PF04865	Baseplate_J	0.78
PF05257	CHAP	0.78
PF09250	Prim-Pol	0.78
PF14359	DUF4406	0.78
PF00141	peroxidase	0.78
PF06114	Peptidase_M78	0.78
PF04232	SpoVS	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	3.10
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	3.10
COG4725	N6-adenosine-specific RNA methylase IME4	Translation, ribosomal structure and biogenesis [J]	3.10
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	2.33
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	2.33
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	2.33
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	2.33
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	2.33
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	1.55
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.55
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.78
COG0376	Catalase (peroxidase I)	Inorganic ion transport and metabolism [P]	0.78
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.78
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	0.78
COG2359	Stage V sporulation protein SpoVS, predicted DNA-binding, AlbA superfamily	Function unknown [S]	0.78
COG3497	Phage tail sheath protein FI	Mobilome: prophages, transposons [X]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.99 %
Unclassified	root	N/A	31.01 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	57.36 %
Unclassified	root	N/A	31.01 %
cellular organisms	root	All Organisms → cellular organisms	11.63 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	50.39 %
Unclassified	root	N/A	31.01 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	11.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.98 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	50.39 %
Unclassified	root	N/A	31.01 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.98 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.10 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.78 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	50.39 %
Unclassified	root	N/A	31.01 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.98 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.55 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.55 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.78 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	50.39 %
Unclassified	root	N/A	31.01 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.98 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.55 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.78 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	37.21 %
Unclassified	root	N/A	31.01 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.98 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2.33 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1.55 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.78 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	37.21 %
Unclassified	root	N/A	31.01 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.98 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2.33 %
Aphanizomenonaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae	1.55 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	37.21 %
Unclassified	root	N/A	31.01 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.98 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2.33 %
Aphanizomenon	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon	1.55 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	37.21 %
Unclassified	root	N/A	31.01 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.98 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2.33 %
Aphanizomenon flos-aquae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae	1.55 %
unclassified Cytophagaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → unclassified Cytophagaceae	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	37.21 %
Unclassified	root	N/A	31.01 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.98 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2.33 %
Aphanizomenon flos-aquae WA102	isolate	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1.55 %
Cytophagaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → unclassified Cytophagaceae → Cytophagaceae bacterium	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000385\|PR_CR_10_Liq_1_inCRDRAFT_1008525	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → unclassified Cytophagaceae → Cytophagaceae bacterium	3575	Open in IMG/M
3300002294\|B570J29584_1006082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	798	Open in IMG/M
3300002408\|B570J29032_109144224	Not Available	610	Open in IMG/M
3300002835\|B570J40625_101736525	Not Available	507	Open in IMG/M
3300003430\|JGI25921J50272_10032445	All Organisms → Viruses → Predicted Viral	1286	Open in IMG/M
3300005527\|Ga0068876_10114525	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1602	Open in IMG/M
3300005527\|Ga0068876_10162691	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1308	Open in IMG/M
3300005662\|Ga0078894_10351651	All Organisms → Viruses → Predicted Viral	1334	Open in IMG/M
3300005662\|Ga0078894_10371193	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300005662\|Ga0078894_10522630	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1064	Open in IMG/M
3300005662\|Ga0078894_11078705	Not Available	687	Open in IMG/M
3300005662\|Ga0078894_11188408	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300005662\|Ga0078894_11635658	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	530	Open in IMG/M
3300005662\|Ga0078894_11789768	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	501	Open in IMG/M
3300006030\|Ga0075470_10180076	Not Available	610	Open in IMG/M
3300006875\|Ga0075473_10068624	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300007609\|Ga0102945_1021950	Not Available	1397	Open in IMG/M
3300008107\|Ga0114340_1000014	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	142186	Open in IMG/M
3300008448\|Ga0114876_1126839	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	968	Open in IMG/M
3300008962\|Ga0104242_1019001	Not Available	1193	Open in IMG/M
3300009068\|Ga0114973_10000009	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	137503	Open in IMG/M
3300009151\|Ga0114962_10000053	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	87236	Open in IMG/M
3300009151\|Ga0114962_10000075	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	76956	Open in IMG/M
3300009151\|Ga0114962_10000923	Not Available	25472	Open in IMG/M
3300009151\|Ga0114962_10001218	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	22443	Open in IMG/M
3300009152\|Ga0114980_10002021	Not Available	14485	Open in IMG/M
3300009154\|Ga0114963_10063554	All Organisms → cellular organisms → Bacteria	2325	Open in IMG/M
3300009155\|Ga0114968_10002861	Not Available	13058	Open in IMG/M
3300009158\|Ga0114977_10088036	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1892	Open in IMG/M
3300009182\|Ga0114959_10058234	All Organisms → Viruses → Predicted Viral	2214	Open in IMG/M
3300009182\|Ga0114959_10074232	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1909	Open in IMG/M
3300009182\|Ga0114959_10313765	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	780	Open in IMG/M
3300009184\|Ga0114976_10085801	All Organisms → Viruses → Predicted Viral	1811	Open in IMG/M
3300009184\|Ga0114976_10090556	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1754	Open in IMG/M
3300009194\|Ga0114983_1042906	All Organisms → Viruses → Predicted Viral	1092	Open in IMG/M
3300009419\|Ga0114982_1001626	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	10577	Open in IMG/M
3300009419\|Ga0114982_1013015	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2892	Open in IMG/M
3300009419\|Ga0114982_1135366	Not Available	761	Open in IMG/M
3300010157\|Ga0114964_10029985	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3005	Open in IMG/M
3300010157\|Ga0114964_10183965	All Organisms → Viruses → Predicted Viral	1008	Open in IMG/M
3300010157\|Ga0114964_10251585	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	841	Open in IMG/M
3300010157\|Ga0114964_10358921	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	689	Open in IMG/M
3300010158\|Ga0114960_10421561	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	649	Open in IMG/M
3300010160\|Ga0114967_10014292	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5795	Open in IMG/M
3300010160\|Ga0114967_10015176	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5586	Open in IMG/M
3300010160\|Ga0114967_10050099	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2641	Open in IMG/M
3300010388\|Ga0136551_1000983	Not Available	7479	Open in IMG/M
3300010389\|Ga0136549_10276021	Not Available	705	Open in IMG/M
3300010885\|Ga0133913_11272176	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1881	Open in IMG/M
3300010885\|Ga0133913_13232063	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1076	Open in IMG/M
3300012347\|Ga0157142_1005494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2269	Open in IMG/M
3300012352\|Ga0157138_1000852	Not Available	5715	Open in IMG/M
3300012352\|Ga0157138_1005093	Not Available	2211	Open in IMG/M
3300012665\|Ga0157210_1000006	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	127623	Open in IMG/M
3300013004\|Ga0164293_10061515	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2986	Open in IMG/M
3300013004\|Ga0164293_10130726	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1889	Open in IMG/M
3300013285\|Ga0136642_1003479	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5826	Open in IMG/M
3300017766\|Ga0181343_1017292	All Organisms → cellular organisms → Bacteria	2255	Open in IMG/M
3300019784\|Ga0181359_1121230	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	935	Open in IMG/M
3300020157\|Ga0194049_1006295	All Organisms → cellular organisms → Bacteria	3176	Open in IMG/M
3300020533\|Ga0208364_1013342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1215	Open in IMG/M
3300021438\|Ga0213920_1029585	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1256	Open in IMG/M
3300021962\|Ga0222713_10074699	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2494	Open in IMG/M
3300021963\|Ga0222712_10058469	Not Available	2839	Open in IMG/M
3300021963\|Ga0222712_10732260	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	553	Open in IMG/M
3300022591\|Ga0236341_1099592	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	636	Open in IMG/M
3300022746\|Ga0228701_1085396	Not Available	674	Open in IMG/M
3300022747\|Ga0228703_1058570	All Organisms → Viruses → Predicted Viral	1006	Open in IMG/M
3300022752\|Ga0214917_10000621	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	46146	Open in IMG/M
3300022752\|Ga0214917_10075188	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2097	Open in IMG/M
3300023174\|Ga0214921_10031560	Not Available	5166	Open in IMG/M
3300023311\|Ga0256681_11627991	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	613	Open in IMG/M
3300027365\|Ga0209300_1057069	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	638	Open in IMG/M
3300027708\|Ga0209188_1000063	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	127237	Open in IMG/M
3300027708\|Ga0209188_1000120	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	90217	Open in IMG/M
3300027708\|Ga0209188_1000424	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	41040	Open in IMG/M
3300027708\|Ga0209188_1009294	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5695	Open in IMG/M
3300027708\|Ga0209188_1039985	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2159	Open in IMG/M
3300027708\|Ga0209188_1281667	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	561	Open in IMG/M
3300027710\|Ga0209599_10001453	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	11230	Open in IMG/M
3300027710\|Ga0209599_10004542	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5013	Open in IMG/M
3300027734\|Ga0209087_1194086	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	783	Open in IMG/M
3300027741\|Ga0209085_1107198	All Organisms → Viruses → Predicted Viral	1222	Open in IMG/M
3300027764\|Ga0209134_10159946	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	776	Open in IMG/M
3300027777\|Ga0209829_10015429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	4651	Open in IMG/M
3300027963\|Ga0209400_1034962	All Organisms → cellular organisms → Bacteria	2752	Open in IMG/M
3300027973\|Ga0209298_10000577	Not Available	24507	Open in IMG/M
3300028025\|Ga0247723_1005614	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5620	Open in IMG/M
3300028025\|Ga0247723_1015090	Not Available	2785	Open in IMG/M
3300028025\|Ga0247723_1038075	Not Available	1454	Open in IMG/M
3300028025\|Ga0247723_1142032	Not Available	569	Open in IMG/M
3300028027\|Ga0247722_10124191	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	942	Open in IMG/M
3300028392\|Ga0304729_1057539	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1434	Open in IMG/M
3300028392\|Ga0304729_1062550	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1357	Open in IMG/M
3300028394\|Ga0304730_1001092	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	21343	Open in IMG/M
3300028394\|Ga0304730_1011054	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5273	Open in IMG/M
3300028394\|Ga0304730_1168091	Not Available	863	Open in IMG/M
3300031758\|Ga0315907_10008420	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10596	Open in IMG/M
3300031758\|Ga0315907_10028975	Not Available	5021	Open in IMG/M
3300031857\|Ga0315909_10708528	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	652	Open in IMG/M
3300031951\|Ga0315904_10133492	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2546	Open in IMG/M
3300032092\|Ga0315905_10198492	Not Available	1976	Open in IMG/M
3300032092\|Ga0315905_10351771	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300032092\|Ga0315905_10870777	Not Available	774	Open in IMG/M
3300032093\|Ga0315902_10197081	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2027	Open in IMG/M
3300032116\|Ga0315903_10891699	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	637	Open in IMG/M
3300033993\|Ga0334994_0295982	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	824	Open in IMG/M
3300033994\|Ga0334996_0000007	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	123830	Open in IMG/M
3300033994\|Ga0334996_0001179	Not Available	17431	Open in IMG/M
3300033994\|Ga0334996_0056995	All Organisms → cellular organisms → Bacteria	2400	Open in IMG/M
3300034061\|Ga0334987_0384739	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300034062\|Ga0334995_0013052	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7701	Open in IMG/M
3300034101\|Ga0335027_0002408	Not Available	16341	Open in IMG/M
3300034102\|Ga0335029_0037557	All Organisms → Viruses → Predicted Viral	3616	Open in IMG/M
3300034104\|Ga0335031_0024950	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4376	Open in IMG/M
3300034110\|Ga0335055_0120352	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1195	Open in IMG/M
3300034117\|Ga0335033_0103608	Not Available	1640	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	90.70%
Terrestrial	Environmental → Terrestrial	9.30%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	82.95%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	9.30%
Marine	Environmental → Aquatic → Marine	6.20%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.78%
Sediment	Environmental → Aquatic → Sediment	0.78%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	54.26%
Lentic	Environmental → Aquatic → Freshwater → Lentic	13.18%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	9.30%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	6.98%
Lotic	Environmental → Aquatic → Freshwater → Lotic	4.65%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.65%
Creek	Environmental → Aquatic → Freshwater → Creek	3.10%
Coastal	Environmental → Aquatic → Marine → Coastal	1.55%
Pond	Environmental → Aquatic → Freshwater → Pond	0.78%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	54.26%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	11.63%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	9.30%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	6.98%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	4.65%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.65%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	3.10%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	1.55%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	34.11%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	14.73%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	10.08%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	6.98%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	5.43%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	4.65%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.10%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	3.10%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	3.88%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	3.88%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	1.55%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.55%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.55%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.78%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.78%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.78%
Pond Fresh Water	Environmental → Aquatic → Freshwater → Pond → Unclassified → Pond Fresh Water	0.78%
Enviromental	Environmental → Aquatic → Marine → Unclassified → Unclassified → Enviromental	0.78%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.78%
Marine Methane Seep Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000385	Marine microbial community from Cabo Rojo, Puerto Rico - PR CR 10% Liquid 1	Environmental	Open in IMG/M
3300002294	Freshwater microbial communities from Lake Mendota, WI - 17MAY2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003430	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006030	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA	Environmental	Open in IMG/M
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental	Open in IMG/M
3300007609	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300008962	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300009194	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 RT	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010388	Freshwater microbial communities from the surface of the forest pond in Jussy, Geneva, Switzerland - JEBV, may 2015	Environmental	Open in IMG/M
3300010389	Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsf	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012347	Freshwater microbial communities from Fish Creek, Ontario, Canada - S48	Environmental	Open in IMG/M
3300012352	Freshwater microbial communities from Baxter Creek, Ontario, Canada - S37	Environmental	Open in IMG/M
3300012663	Freshwater microbial communities from Indian River, Ontario, Canada - S50	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013285	Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020157	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L224-25m	Environmental	Open in IMG/M
3300020533	Freshwater microbial communities from Lake Mendota, WI - 08JUN2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021438	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17 MG	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022591	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Summer S2	Environmental	Open in IMG/M
3300022746	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17_Aug_MG	Environmental	Open in IMG/M
3300022747	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17_Aug_MG	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023311	Combined Assembly of Gp0281739, Gp0281740, Gp0281741	Environmental	Open in IMG/M
3300027365	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 RT (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027764	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027973	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300028027	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 3H_FC	Environmental	Open in IMG/M
3300028392	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG (v2)	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034110	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Jun2009D10-rr0171	Environmental	Open in IMG/M
3300034117	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jun2014-rr0124	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
PR_CR_10_Liq_1_inCRDRAFT_10085254	3300000385	Enviromental	MAKGKGKPSSAPKIDNSDRKSGKAYKKAPKVFDPVKRRLVRK*
B570J29584_10060822	3300002294	Freshwater	MGKNKKAAPAAVKTTTDRKNGKASKKRPKVFDAVKRRLVTLKK*
B570J29032_1091442242	3300002408	Freshwater	MAKGKGGAPAPKKTGDNSDRKNGKAFKKHPKVFDAVKRRLVNK*
B570J40625_1017365252	3300002835	Freshwater	MAKGKGGAPAPKKTGDNSDRKNGKANKKRPKIFDAIKRRLVTK*
JGI25921J50272_100324452	3300003430	Freshwater Lake	MAKGRGGAPAPVKSSSERKNGKASKKRPLVXDAVKRRXVRA*
Ga0068876_101145252	3300005527	Freshwater Lake	MAKGSSGGGKPPAKGSNADRNNGKAFKKRPKIFDPVKRKLVNKQ*
Ga0068876_101626913	3300005527	Freshwater Lake	MAKGKGKGGAPAPKKSNEGDRKNGKAFKKRPKIFDAIKRRLVRK*
Ga0078894_103516513	3300005662	Freshwater Lake	MAKGKGGAPAPQKSSTDRQNGKASKKRPKVFDTEKRRLVVSK*
Ga0078894_103711935	3300005662	Freshwater Lake	MAKGKGGGPKPPQKGDNSDRKNGKANKKTPKVFDPVKRRLVTKTK*
Ga0078894_105226302	3300005662	Freshwater Lake	MAKGKGGGVKTAKGSNDSRPSGKANKKYPKIFDAIKRRLVTK*
Ga0078894_110787052	3300005662	Freshwater Lake	MAKGKGGGGKPPVKGSNSDRKSGKANKKRPKIFDAIKRRLVTKKD*
Ga0078894_111884082	3300005662	Freshwater Lake	MAKGRGAAPAPVKSGSDRKNGKASKKKPKVFDPAKRRLVTK*
Ga0078894_116356581	3300005662	Freshwater Lake	MAKGKGGGPKPPQKGANSDRKNGKASKKTPKVFDAAKRRLVTKTK*
Ga0078894_117897682	3300005662	Freshwater Lake	MAKGRGGAPAPVKSSSERKNGKASKKRPLVFDAVKRRLVRA*
Ga0075470_101800762	3300006030	Aqueous	MAKGKGGGAKPPVKGANDDRVSSKKKAYKKRPKIFDAIKRRLVTKKD*
Ga0075473_100686242	3300006875	Aqueous	MLLLYTETGAIMAKGKGGGAKPPVKGANDDRVSSKKKAYKKRPKIFDAIKRRLVTKKD*
Ga0102945_10219504	3300007609	Pond Water	VAKGKGGKKPESQKSSADRRSGKAFKKRPKVFDSVNRRLVTVES*
Ga0114340_100001462	3300008107	Freshwater, Plankton	MAKGKGGGKPTTPVKDNSGADRNNGKARKKHPKMFDPVKRRLVAVK*
Ga0114876_11268391	3300008448	Freshwater Lake	KKVAPPPPKPSDDSKRNNGKAWKKRPKIFDKIKRRLVTKEK*
Ga0104242_10190012	3300008962	Freshwater	MAKGKGGGSKPAAKGANDDRVSMKKKAYKKRPKIFDAIKRRLVTKKD*
Ga0114973_1000000910	3300009068	Freshwater Lake	MAKGKPGGKPVPEVKSSGRQNGKAFKKRPKIFDKIKRKLVNITK*
Ga0114962_1000005316	3300009151	Freshwater Lake	MAKGKSAPAPVTKASDGRNNGKAFKKHPKIFDAIKRKLVRKK*
Ga0114962_1000007556	3300009151	Freshwater Lake	MAKGRGGAPAAPVRKGPDRNNGKAFKKHPKKFDAEKRRLVNA*
Ga0114962_1000092319	3300009151	Freshwater Lake	MAKGKGGKPAPVVVKRTGDGRPSGKATKKRPKVFDAIKRRLVTKKD*
Ga0114962_1000121823	3300009151	Freshwater Lake	MAIKKGGGPKPPVKGGNSDRKNGKANKKYPKVFDAIKRRLVTKTK*
Ga0114980_1000202113	3300009152	Freshwater Lake	MAKGNGGGNKPAAKGANDDRVSMKKKAYKKRPKVFDAIKRRLVTKKD*
Ga0114963_100635545	3300009154	Freshwater Lake	MAKGKSAPAPVTKSGDGRNNGKTPKKYPKIFDAIKRKLVRKK*
Ga0114968_100028612	3300009155	Freshwater Lake	MAQGKGGGGQKSGPARNDDRVSSKKKAYKKRPKIWDPEKRRLVVGPPLGK*
Ga0114977_100880362	3300009158	Freshwater Lake	MAKGKGGAPAPVKSTTTRNNGKASKKRPKFFDAIKRKLTTKKD*
Ga0114978_105141931	3300009159	Freshwater Lake	VMIYIPKESRFMAKGSGGGKPAAKGSNADRNNGKASKKSPKVFDKEKRKLVNKN*
Ga0114959_100582341	3300009182	Freshwater Lake	MAKGKGGKPAPVVTKRSGDDRPNGKAKKQRPKVWDAEKRRLVTKSE*
Ga0114959_100742323	3300009182	Freshwater Lake	MALKKGGGPKPPVKGDNSDRKNGKANKKYPKVFDAIKRRLVTKSK*
Ga0114959_103137653	3300009182	Freshwater Lake	MAIKKGGGPKPPVKGGNSDRKNGKANKKYPKVFDAIKRRLV
Ga0114976_100383685	3300009184	Freshwater Lake	MAKGKGGGAKSAKGSNDSRPNGKANKKYPKIFDAVKRKLVNKN*
Ga0114976_100858013	3300009184	Freshwater Lake	MAKGKPQAAPVKKNASERPNGKAVKKSPKIFDAIKRKLVRKK*
Ga0114976_100905562	3300009184	Freshwater Lake	MAQGKGGGQKPAKGSNSDRKSGKGNKKNPKVFDPVKRRLVTKTS*
Ga0114983_10429063	3300009194	Deep Subsurface	MAKGKGGGSAPAKGSNSDRNNKKAFKKRPKMFDAIKRRLVTKN*
Ga0114982_100162616	3300009419	Deep Subsurface	MTMAKGKGGGSSIKRESNSDRNNKKAFKKRPKMFDAIKRRLVTKA*
Ga0114982_10130154	3300009419	Deep Subsurface	MAKGSGGGKPAAKGANDDRLSSKKKAYKKRPKVWDPEKRRLVTKTN*
Ga0114982_11353662	3300009419	Deep Subsurface	GSKPTAKDANDDRVSMKKKAYKKRPKIFDAIKRRLVTKKD*
Ga0114964_100299854	3300010157	Freshwater Lake	MAIKKGGGGKPPVKGSNSDRKNGKAEKKYPKVFDAIKRKLVVKGK*
Ga0114964_101839653	3300010157	Freshwater Lake	MAKGKPAPAPVKKAGDGRNNGKAPKKRPKIFDAIKRKLVRKK*
Ga0114964_102515852	3300010157	Freshwater Lake	MAKGKPAPAPVKKAGDGRNNGKAFKKRPKIWDAIKRKLVVKK*
Ga0114964_103589213	3300010157	Freshwater Lake	MAKGKGGAPAPAKSTTTRNNGKAFKKRPKVWDAIKRRLVTKKD*
Ga0114960_104215611	3300010158	Freshwater Lake	MAKGKPQAAPVKKSGDGRNNGKALKKRPKIFDAIKRKLVRKK*
Ga0114967_100142923	3300010160	Freshwater Lake	MAKGKPQAAPVKKNASERPNGKAVKKRPKIFDAIKRKLVRKK*
Ga0114967_100151762	3300010160	Freshwater Lake	MAKGKPQAAPVKKSEGERPNGKAVKKRPKIFDAIKRKLVRKK*
Ga0114967_100500997	3300010160	Freshwater Lake	MAKGKGGGGKPPVKGANDDRLSSKKKAYKKRPKVWDPEKRRLVTGPSQGK*
Ga0136551_100098310	3300010388	Pond Fresh Water	MAKGKGGGGQKSGPARNDERTNGKATKKRPKIFDAIKRRLVTRD*
Ga0136549_102760211	3300010389	Marine Methane Seep Sediment	PAPVKDTSGADRKNGKARKKRPKIFDAAKRRLVTNK*
Ga0133913_104030099	3300010885	Freshwater Lake	MAKSKGGGKPVPEIKSAGRQNGKAPKKRPKVWDPEKRRLVTKV*
Ga0133913_112721765	3300010885	Freshwater Lake	MAVKKGGGPKPPVKGANSDRKNGKANKKYPKVFDAIKRRLVTKSK*
Ga0133913_132320632	3300010885	Freshwater Lake	MAKGKSAPAPVTKSGDGRNNGKAPKKYPKIFDAIKRKLVRKK*
Ga0157142_10054941	3300012347	Freshwater	MAQKKSGGPVAKGSNSDRKNGKAAKKHPKVFDREKRRLVRAK*
Ga0157138_10008524	3300012352	Freshwater	MAKGKGGAQAPQKTTTDRKNGKASKKRPKVWDSEKRRLVTAK*
Ga0157138_10050934	3300012352	Freshwater	MAKGKGGAPAPQKTTTDRKNGKASKKRPKIFDAVKRRLVTKK*
Ga0157203_100011828	3300012663	Freshwater	MAKNKGGGKPAPEVKSSGRQNGKASKKHPKVWDPIKRRLVTGEPNKG*
Ga0157210_100000690	3300012665	Freshwater	MAKGKGGGGQTPQKTTTDRKNGKAEKKRPKFFDAIKRRLVTKKN*
Ga0157210_10032027	3300012665	Freshwater	MAKNKGGGKPAPEVKSSGRQNGKAWKKHPKVWDPTKRRLVAGEPNKG*
Ga0164293_100615153	3300013004	Freshwater	MAKGKGGAPAPQKTTTDRKNGKASKKRPKVFDAVKRRLVTKK*
Ga0164293_101307263	3300013004	Freshwater	MAKGKGGAPAAKGGNSDRKNEKAFKKRPKIFDAIKRRLVTKQ*
Ga0136642_10034799	3300013285	Freshwater	MAQAKGAPAPKKQGDNSNRKNGKASKKRPKIFDAIKRKLVTKKD*
Ga0181343_10172924	3300017766	Freshwater Lake	MAKGKGGGPKPPQKGDNSDRKNGKANKKTPKVFDPVKRRLVTKTK
Ga0181359_11212303	3300019784	Freshwater Lake	MAKGKGGGSKPAKGSNDSRPNGKANKKYPKIFDAVKRKLVNKN
Ga0194049_10062953	3300020157	Anoxic Zone Freshwater	MAKGKPQAAPVKKAGDGRNNGKALKKRPKIFDAIKRKLVRKK
Ga0208364_10133422	3300020533	Freshwater	MGKNKKAAPAAVKTTTDRKNGKASKKRPKVFDAVKRRLVTLKK
Ga0213920_100015426	3300021438	Freshwater	MAKGKGGAKPAAPTKGSTDRPNQKAFKKHPKKFDPIKRRLVADN
Ga0213920_10295853	3300021438	Freshwater	MAKGNGGGKPPVKSGNSDRKNGKAFKKRPKIWDAIKRRLVTKN
Ga0222714_101961742	3300021961	Estuarine Water	MAKNKGGGKPAPEVKSSGRQNGKAWKKHPKVWDPTKRRLVAGEPNKG
Ga0222713_100746994	3300021962	Estuarine Water	MAKGKGGAPAPAKSSNDRQNGKAFKKRPKVFDPVKRRLVTSK
Ga0222713_100918125	3300021962	Estuarine Water	MAKNKGGAKPAPEVKSSGRQNGKAWKKRPKVWDPVKRRLVVGESRKD
Ga0222712_100584697	3300021963	Estuarine Water	MAKGKGSAPAPVKTTTTRNNGKASKKRPKIFDKIKRKLVVKQN
Ga0222712_107322602	3300021963	Estuarine Water	MAKGKGGGKPAAPVKSTTDRQNGKASKKRPKVFDAIKRRLVTKSE
Ga0236341_10995923	3300022591	Freshwater	MAKGKGGKPAPVQAKRTGDDRPNGKATKKRPKVWDAEKRRLVTKSE
Ga0228701_10853961	3300022746	Freshwater	KGKGGAPAQKKTGDNPDRKNGKAFKKRPKMFDAIKRRLVNKQ
Ga0228703_10585702	3300022747	Freshwater	MAKGKGGPKAPVKGNNDGRKNGKAAKKHPKMFDPERRRLVSA
Ga0214917_1000062128	3300022752	Freshwater	MAKGKPAPAPVKSTNSRNNGKAPKKRPKIFDAIKRKLVTKKD
Ga0214917_100751883	3300022752	Freshwater	MAKGKPQAAPVKKSAGERPNGKAVKKSPKIFDAIKRKLVRKK
Ga0214921_1000014454	3300023174	Freshwater	MAKSKGGGKPVPEVKSSGRQNGKASKKRPKIFDKEKRRLVVKTN
Ga0214921_100315608	3300023174	Freshwater	MAKGKGGGQKPAKGSNSDRQNGKANKKRPKEFDVEKRRLVNKTT
Ga0256681_116279911	3300023311	Freshwater	MAKGKGAPAPAKKGDNSERKNGKASKKRPKIFDAIKRRLVTKK
Ga0209300_10570691	3300027365	Deep Subsurface	MAKGKGGGSAPAKGSNSDRNNKKAFKKRPKMFDAIKRRLVTKN
Ga0209188_10000636	3300027708	Freshwater Lake	MAKGKGGKPAPVVVKRTGDGRPSGKATKKRPKVFDAIKRRLVTKKD
Ga0209188_100012075	3300027708	Freshwater Lake	MAKGRGGAPAAPVRKGPDRNNGKAFKKHPKKFDAEKRRLVNA
Ga0209188_100042440	3300027708	Freshwater Lake	MAKGKPAPAPVKKAGDGRNNGKAPKKRPKIFDAIKRKLVRKK
Ga0209188_10085989	3300027708	Freshwater Lake	MAKGKPGGKPVPEVKSSGRQNGKAFKKRPKIFDKIKRKLVNITK
Ga0209188_100929410	3300027708	Freshwater Lake	MAKGKSAPAPVTKASDGRNNGKAFKKHPKIFDAIKRKLVRKK
Ga0209188_10399854	3300027708	Freshwater Lake	MAKGKGGKPAPVVTKRSGDDRPNGKAKKQRPKVWDAEKRRLVTKSE
Ga0209188_12816672	3300027708	Freshwater Lake	MAIKKGGGPKPPVKGGNSDRKNGKANKKYPKVFDAIKRRLVTKSK
Ga0209599_100014538	3300027710	Deep Subsurface	MAKGKGGGSSIKRESNSDRNNKKAFKKRPKMFDAIKRRLVTKA
Ga0209599_1000454212	3300027710	Deep Subsurface	MAKGSGGGKPAAKGANDDRLSSKKKAYKKRPKVWDPEKRRLVTKTN
Ga0209087_11940861	3300027734	Freshwater Lake	MAKGKGGGAKSAKGSNDSRPNGKANKKYPKIFDAVKRKLVNKN
Ga0209085_11071983	3300027741	Freshwater Lake	VATGVKMAKGRGGAPAAPVRKGPDRNNGKAFKKHPKKFDAEKRRLVNA
Ga0209134_101599462	3300027764	Freshwater Lake	MAKGKGGAPAPVSKGGDRQNGKAVKKHPKMFDATKRRLVSAK
Ga0209829_100154296	3300027777	Freshwater Lake	MAKGKPAPAPVKKAGDGRNNGKAFKKRPKIWDAIKRKLVVKK
Ga0209400_10349622	3300027963	Freshwater Lake	MAQGKGGGGQKSGPARNDDRVSSKKKAYKKRPKIWDPEKRRLVVGPPLGK
Ga0209298_1000057724	3300027973	Freshwater Lake	MAKGNGGGNKPAAKGANDDRVSMKKKAYKKRPKVFDAIKRRLVTKKD
Ga0247723_10056146	3300028025	Deep Subsurface Sediment	MAKGKGGGSAPAKGSNSDRNNKKAFKKRPKMFDAVKRRLVTKN
Ga0247723_10150907	3300028025	Deep Subsurface Sediment	MAKGKGGGKPTTPVKDSSGADRNNGKARKKHPKMFDPVKRRLVAVK
Ga0247723_10380753	3300028025	Deep Subsurface Sediment	MAKGKGGAPAPAAKNTSGEGRNNGKAVKKHPKVFDPVKRRLVNK
Ga0247723_11420321	3300028025	Deep Subsurface Sediment	DMAKGKGGGQKPAKGSNSDRQNGKANKKRPKKFDLEKRRLVVVEN
Ga0247722_101241911	3300028027	Deep Subsurface Sediment	MTMAKGKGGGSSIKRESNSDRNNKKAFKKRPKMFDAIKRRLVTKA
Ga0304729_10575393	3300028392	Freshwater Lake	MAKGKGGAPAPAKSTTTRNNGKAFKKRPKVWDAIKRRLVTKKD
Ga0304729_10625504	3300028392	Freshwater Lake	MAIKKGGGGKPPVKGSNSDRKNGKAEKKYPKVFDAIKRKLVVKGK
Ga0304730_100109219	3300028394	Freshwater Lake	MAKGKPQAAPVKKNASERPNGKAVKKRPKIFDAIKRKLVRKK
Ga0304730_10110542	3300028394	Freshwater Lake	MAKGKPQAAPVKKSEGERPNGKAVKKRPKIFDAIKRKLVRKK
Ga0304730_11680911	3300028394	Freshwater Lake	MAKGKGGGGKPPVKGANDDRLSSKKKAYKKRPKVWDPEKRRLVTGPSQGK
Ga0315907_1000842016	3300031758	Freshwater	MAKGKGKGGAPAPKKSNEGDRKNGKAFKKRPKIFDAIKRRLVRK
Ga0315907_100289759	3300031758	Freshwater	MAKGSSGGGKPPAKGSNADRNNGKAFKKRPKIFDPVKRKLVNKQ
Ga0315909_107085282	3300031857	Freshwater	MAKGKGGAPAPKKTGNDERKNGKASKKRPKIFDAIKRRLVAKN
Ga0315904_101334926	3300031951	Freshwater	MAKGKGGAPAPKKTGNDERKNGKALKKRPKIFDAIKRRLVTKN
Ga0315905_101984921	3300032092	Freshwater	MARGKGGAPAPQKTTTDRKNGKASKKRPKVFDAIKRRLVTKQ
Ga0315905_103517714	3300032092	Freshwater	MAKGNGGGNKPAAKGANDDRVSMKKKAYKKRPKIFDAIKRRLVTKKD
Ga0315905_108707771	3300032092	Freshwater	MAKGKGGAPAPQKTTTDRKNGKASKKRPKVFDAVKRRLVTKQ
Ga0315902_101970813	3300032093	Freshwater	MGKPKKVAPPPPKPSDDSKRNNGKAWKKRPKIFDKIKRRLVTKEN
Ga0315903_108916992	3300032116	Freshwater	MAKGKGGAPAPKKTGNDERKNGKAPKKRPKIFDAIKRRLVTKN
Ga0334994_0295982_546_674	3300033993	Freshwater	MAKGKGGGPAPKKGGNDDRNNKKAFKKRPKIFDAIKRRLVSK
Ga0334996_0000007_14647_14778	3300033994	Freshwater	MAKGKGGASAPVKTTTTRQNGKASKKRPKVFDKEKRKLVVQQN
Ga0334996_0001179_2422_2559	3300033994	Freshwater	MTMAKGKGGGPAPKKGGNDDRNNKKAFKKRPKIFDAIKRRLITKS
Ga0334996_0056995_1223_1363	3300033994	Freshwater	MAKGKGGGSQPSKSSNDDRLSSKKKANKKRPKIFDAIKRRLVTKKD
Ga0334996_0077212_1682_1825	3300033994	Freshwater	MAKGKGGAKPAPEVKSSGRQNGKAWKKHPKVWDPIKRRLVAGEPNKG
Ga0334987_0097236_236_364	3300034061	Freshwater	MAKGSGGGAKKKDGNDSRNNGKAAKKHPKIFDAVKRRLVTQK
Ga0334987_0384739_483_617	3300034061	Freshwater	MAKGKGGGGQKSGPARNDSRTNGKAAKKRPKIFDAIKRRLVTRD
Ga0334995_0013052_24_155	3300034062	Freshwater	MAKGKGGAPAPKKTGDNSNRKNGKANKKHPKVFDAVKRRLVNK
Ga0335027_0002408_6577_6729	3300034101	Freshwater	MAKGKGGGAKPPAKGANDDRLSSKKKAYKKRPKVWDAIKRRLVTGESKGK
Ga0335029_0037557_3090_3230	3300034102	Freshwater	MAKGSGGGKPAAKGNNDDRLSSKKKAYKKRPKVWDPEKRRLVTKTN
Ga0335031_0024950_1889_2017	3300034104	Freshwater	MAKGKGPAPAAKGGNSDRKNEKAFKKRPKMFDAIKRRLVTNK
Ga0335055_0120352_192_329	3300034110	Freshwater	MTMAKGKGGGPAPKKGGNDDRNNKKAFKKRPKIFDAIKRRLVTKA
Ga0335033_0103608_54_182	3300034117	Freshwater	MAKGKGGGSAPAKGSNSDRNNKKAFKKRPKIFDAIKRRLVSK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063424

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences