NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F063460

Metagenome Family F063460

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F063460
Family Type Metagenome
Number of Sequences 129
Average Sequence Length 60 residues
Representative Sequence VSTAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVREAEQAA
Number of Associated Samples 109
Number of Associated Scaffolds 129

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 83.46 %
% of genes near scaffold ends (potentially truncated) 22.48 %
% of genes from short scaffolds (< 2000 bps) 81.40 %
Associated GOLD sequencing projects 99
AlphaFold2 3D model prediction Yes
3D model pTM-score0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (86.822 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil
(8.527 % of family members)
Environment Ontology (ENVO) Unclassified
(21.705 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.612 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 61.54%    β-sheet: 0.00%    Coil/Unstructured: 38.46%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.78
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.2.5.1: Prefoldind1fxkc_1fxk0.89329
a.26.1.1: Long-chain cytokinesd1cnt1_1cnt0.88614
a.24.23.1: Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domaind1szia_1szi0.88177
a.23.1.1: HSC20 (HSCB), C-terminal oligomerisation domaind1fpoa21fpo0.87521
a.25.1.1: Ferritind6txia_6txi0.8668

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 129 Family Scaffolds
PF069833-dmu-9_3-mt 34.88
PF07690MFS_1 17.05
PF14542Acetyltransf_CG 2.33
PF00535Glycos_transf_2 2.33
PF02515CoA_transf_3 2.33
PF12902Ferritin-like 1.55
PF06224HTH_42 0.78
PF00149Metallophos 0.78
PF12802MarR_2 0.78
PF01042Ribonuc_L-PSP 0.78
PF04542Sigma70_r2 0.78
PF02080TrkA_C 0.78
PF00230MIP 0.78
PF03176MMPL 0.78
PF11799IMS_C 0.78
PF00801PKD 0.78
PF01594AI-2E_transport 0.78
PF14535AMP-binding_C_2 0.78
PF00480ROK 0.78
PF01022HTH_5 0.78
PF12840HTH_20 0.78
PF13417GST_N_3 0.78
PF12850Metallophos_2 0.78
PF07883Cupin_2 0.78
PF07730HisKA_3 0.78
PF12697Abhydrolase_6 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 129 Family Scaffolds
COG2764Zn-dependent glyoxalase, PhnB familyEnergy production and conversion [C] 34.88
COG3865Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferaseGeneral function prediction only [R] 34.88
COG1804Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferasesLipid transport and metabolism [I] 2.33
COG1940Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domainTranscription [K] 1.55
COG0251Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 familyDefense mechanisms [V] 0.78
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.78
COG0580Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)Carbohydrate transport and metabolism [G] 0.78
COG0628Predicted PurR-regulated permease PerMGeneral function prediction only [R] 0.78
COG1033Predicted exporter protein, RND superfamilyGeneral function prediction only [R] 0.78
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.78
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.78
COG2409Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamilyGeneral function prediction only [R] 0.78
COG3214DNA glycosylase YcaQ, repair of DNA interstrand crosslinksReplication, recombination and repair [L] 0.78
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 0.78
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 0.78
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.78
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 0.78
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.78

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms86.82 %
UnclassifiedrootN/A13.18 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_101444101All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium862Open in IMG/M
3300001978|JGI24747J21853_1003353All Organisms → cellular organisms → Bacteria1381Open in IMG/M
3300003659|JGI25404J52841_10141420All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium510Open in IMG/M
3300003911|JGI25405J52794_10067621All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia777Open in IMG/M
3300004114|Ga0062593_100104328All Organisms → cellular organisms → Bacteria2011Open in IMG/M
3300004114|Ga0062593_100435381All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1188Open in IMG/M
3300004114|Ga0062593_100702203All Organisms → cellular organisms → Bacteria987Open in IMG/M
3300004114|Ga0062593_101389622All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300004156|Ga0062589_101107459All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300004156|Ga0062589_102017967All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium585Open in IMG/M
3300004479|Ga0062595_100166258All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1311Open in IMG/M
3300004479|Ga0062595_101921962All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium568Open in IMG/M
3300004643|Ga0062591_101361057All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium701Open in IMG/M
3300005093|Ga0062594_100155771All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1507Open in IMG/M
3300005167|Ga0066672_10034899All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2784Open in IMG/M
3300005171|Ga0066677_10300384All Organisms → cellular organisms → Bacteria917Open in IMG/M
3300005184|Ga0066671_10289985All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1023Open in IMG/M
3300005184|Ga0066671_10641034All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300005332|Ga0066388_100094773All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3425Open in IMG/M
3300005332|Ga0066388_100687720Not Available1632Open in IMG/M
3300005332|Ga0066388_104492516All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia710Open in IMG/M
3300005336|Ga0070680_100431543All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1124Open in IMG/M
3300005337|Ga0070682_100006737All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6445Open in IMG/M
3300005338|Ga0068868_102414229All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium502Open in IMG/M
3300005355|Ga0070671_100768442All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces838Open in IMG/M
3300005434|Ga0070709_10076084All Organisms → cellular organisms → Bacteria2179Open in IMG/M
3300005437|Ga0070710_10052363All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales2295Open in IMG/M
3300005440|Ga0070705_101928964All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria503Open in IMG/M
3300005445|Ga0070708_100040156All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4097Open in IMG/M
3300005454|Ga0066687_10838275All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium548Open in IMG/M
3300005539|Ga0068853_101850890All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium585Open in IMG/M
3300005544|Ga0070686_100101924All Organisms → cellular organisms → Bacteria1941Open in IMG/M
3300005549|Ga0070704_101375387Not Available647Open in IMG/M
3300005564|Ga0070664_100134145All Organisms → cellular organisms → Bacteria2176Open in IMG/M
3300005615|Ga0070702_100975469Not Available669Open in IMG/M
3300005713|Ga0066905_100037551All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2833Open in IMG/M
3300005713|Ga0066905_100283333All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1292Open in IMG/M
3300005764|Ga0066903_100296497All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2553Open in IMG/M
3300005764|Ga0066903_102283687All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces1045Open in IMG/M
3300005840|Ga0068870_10398249All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales895Open in IMG/M
3300005937|Ga0081455_10000836All Organisms → cellular organisms → Bacteria39643Open in IMG/M
3300005937|Ga0081455_10800007Not Available592Open in IMG/M
3300005983|Ga0081540_1002691All Organisms → cellular organisms → Bacteria14453Open in IMG/M
3300006032|Ga0066696_10903647All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium562Open in IMG/M
3300006058|Ga0075432_10014159All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2715Open in IMG/M
3300006806|Ga0079220_10240891All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1075Open in IMG/M
3300006806|Ga0079220_10380547Not Available912Open in IMG/M
3300006854|Ga0075425_100260404All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1995Open in IMG/M
3300006871|Ga0075434_100572847All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1148Open in IMG/M
3300006871|Ga0075434_101805415All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium618Open in IMG/M
3300006881|Ga0068865_101137878All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium689Open in IMG/M
3300006954|Ga0079219_10947514All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium704Open in IMG/M
3300009012|Ga0066710_100634839All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1623Open in IMG/M
3300009012|Ga0066710_101624940All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium989Open in IMG/M
3300009090|Ga0099827_10685609All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium885Open in IMG/M
3300009094|Ga0111539_12767334All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia568Open in IMG/M
3300009137|Ga0066709_101775502All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria868Open in IMG/M
3300009147|Ga0114129_10839220All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1169Open in IMG/M
3300009840|Ga0126313_10044587All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3103Open in IMG/M
3300009840|Ga0126313_10165140All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1682Open in IMG/M
3300010038|Ga0126315_10179739All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1266Open in IMG/M
3300010040|Ga0126308_10136021All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1540Open in IMG/M
3300010041|Ga0126312_10010636All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6159Open in IMG/M
3300010043|Ga0126380_11721912Not Available564Open in IMG/M
3300010045|Ga0126311_10175667All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1546Open in IMG/M
3300010329|Ga0134111_10487537Not Available539Open in IMG/M
3300010359|Ga0126376_11015795All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia831Open in IMG/M
3300010359|Ga0126376_13196212All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium507Open in IMG/M
3300010360|Ga0126372_10394897All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1260Open in IMG/M
3300010362|Ga0126377_10692047All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1071Open in IMG/M
3300010362|Ga0126377_11822243Not Available684Open in IMG/M
3300011119|Ga0105246_10307511All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1283Open in IMG/M
3300012350|Ga0137372_10507581All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium896Open in IMG/M
3300012354|Ga0137366_10668063All Organisms → cellular organisms → Bacteria → Terrabacteria group742Open in IMG/M
3300012356|Ga0137371_10263040All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1347Open in IMG/M
3300012510|Ga0157316_1024173Not Available689Open in IMG/M
3300012905|Ga0157296_10034343All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1100Open in IMG/M
3300012913|Ga0157298_10059395All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia912Open in IMG/M
3300012958|Ga0164299_10921592All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia636Open in IMG/M
3300014497|Ga0182008_10973017Not Available504Open in IMG/M
3300014969|Ga0157376_10031818All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4230Open in IMG/M
3300015371|Ga0132258_11279321Not Available1854Open in IMG/M
3300015374|Ga0132255_104195592All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium611Open in IMG/M
3300018027|Ga0184605_10071442All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1504Open in IMG/M
3300018061|Ga0184619_10009074All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3856Open in IMG/M
3300018072|Ga0184635_10167692All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium877Open in IMG/M
3300018073|Ga0184624_10454894All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria562Open in IMG/M
3300018468|Ga0066662_10007364All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5518Open in IMG/M
3300019356|Ga0173481_10025653All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1840Open in IMG/M
3300019356|Ga0173481_10381713All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium683Open in IMG/M
3300021445|Ga0182009_10181826All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1015Open in IMG/M
3300023261|Ga0247796_1012909All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1223Open in IMG/M
3300024177|Ga0247686_1006189All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1233Open in IMG/M
3300024181|Ga0247693_1072936All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300024232|Ga0247664_1169253All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium516Open in IMG/M
3300024245|Ga0247677_1011252All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1251Open in IMG/M
3300024310|Ga0247681_1017271All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1022Open in IMG/M
3300025906|Ga0207699_10303633All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1115Open in IMG/M
3300025910|Ga0207684_10193669All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1753Open in IMG/M
3300025920|Ga0207649_11394332All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium555Open in IMG/M
3300025921|Ga0207652_11485901All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia581Open in IMG/M
3300025938|Ga0207704_11425913All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium594Open in IMG/M
3300025939|Ga0207665_11255267All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria591Open in IMG/M
3300025939|Ga0207665_11604173All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium516Open in IMG/M
3300025944|Ga0207661_10159451All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1956Open in IMG/M
3300025945|Ga0207679_10818801All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium849Open in IMG/M
3300026078|Ga0207702_10643728Not Available1042Open in IMG/M
3300026116|Ga0207674_10072303All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3464Open in IMG/M
3300026300|Ga0209027_1002997All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae6376Open in IMG/M
3300027485|Ga0207635_1012694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria579Open in IMG/M
3300027765|Ga0209073_10400308Not Available563Open in IMG/M
3300027882|Ga0209590_10703516All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium646Open in IMG/M
3300027907|Ga0207428_10004473All Organisms → cellular organisms → Bacteria13256Open in IMG/M
3300028138|Ga0247684_1021016All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1030Open in IMG/M
3300028587|Ga0247828_10662334All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria645Open in IMG/M
3300028722|Ga0307319_10267885All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium563Open in IMG/M
3300028784|Ga0307282_10245510All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium860Open in IMG/M
3300028796|Ga0307287_10031146All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1905Open in IMG/M
3300031847|Ga0310907_10853120Not Available513Open in IMG/M
3300031995|Ga0307409_100189022All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1831Open in IMG/M
3300031996|Ga0308176_11088130All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia845Open in IMG/M
3300032002|Ga0307416_100423856All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1376Open in IMG/M
3300032003|Ga0310897_10221919All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria834Open in IMG/M
3300032017|Ga0310899_10096667All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1185Open in IMG/M
3300032126|Ga0307415_100125712All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1932Open in IMG/M
3300032160|Ga0311301_10050354All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria9563Open in IMG/M
3300034817|Ga0373948_0108887Not Available659Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil8.53%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.20%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil5.43%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.43%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.65%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.65%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil4.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.65%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere4.65%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.10%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.10%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.10%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.10%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.88%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.33%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.33%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.33%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.78%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.78%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.78%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.78%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.78%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.78%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.78%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.78%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001978Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6Host-AssociatedOpen in IMG/M
3300003659Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300003911Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300005983Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012510Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610Host-AssociatedOpen in IMG/M
3300012905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2EnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300023261Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6EnvironmentalOpen in IMG/M
3300024177Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK27EnvironmentalOpen in IMG/M
3300024181Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34EnvironmentalOpen in IMG/M
3300024232Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05EnvironmentalOpen in IMG/M
3300024245Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18EnvironmentalOpen in IMG/M
3300024310Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300027485Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A3w-11 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028138Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25EnvironmentalOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300034817Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10144410113300000956SoilVSTAVKSFRELDDLVLHLKGLVLVQRVREEGGADEAELGMYRAEIDRVRDELAEYLRGAGR*
JGI24747J21853_100335313300001978Corn, Switchgrass And Miscanthus RhizosphereRELDDLVLHLKGLVLVRKVQETRGAGHDELHMYGVEIERVRDRLAELVRAGAA*
JGI25404J52841_1014142013300003659Tabebuia Heterophylla RhizosphereMSAVMQNFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLATVVRESEQAA*
JGI25405J52794_1006762113300003911Tabebuia Heterophylla RhizosphereMSPALQGFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAAVVRESEQAA*
Ga0062593_10010432823300004114SoilVTAAAQGFRELDDLVLHLKGLVIVQGLREQSGADELELAQYGAEIERVRDELAAYVRAGR
Ga0062593_10043538123300004114SoilVSTAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVRESEQAA*
Ga0062593_10070220323300004114SoilVSAAAYALRELDDLVLHLKGLVLVRGVREERGADPDELAMYGAEIDRVREQLAAFVKEAEAAAAEAA*
Ga0062593_10138962223300004114SoilVSAAVYGFRELDDLVLHLKGLVLVRGVRAEGGADEEELAMYGAEIDRVRDRLAAFVQEAQAA*
Ga0062589_10110745923300004156SoilVSAAVYGFRELDDLVLHLKGLVLVRGVRAEGGADEEELAMYGDEIDRVRDRLAAFVQEAQAA*
Ga0062589_10201796713300004156SoilMMPEPTFRELDDLVLHLKGLVLVRGLREGRGADEHELHQYDAEIDRLRGRLADS
Ga0062595_10016625823300004479SoilMSAAVAQGFRELDDLVLHLKGLVLVRGVREQGGADADELEMYRAEIDRVRERLAAVVKETRAA*
Ga0062595_10192196223300004479SoilMTSFRELDDLVLHLKGLVLVRRLRERSGAEATELAMYGAEIERVRERLAELVQAEAAQAA
Ga0062591_10136105713300004643SoilVTAATQGFRELDDLVLHLKGLVIVQGLREQSGADELELAQYGAEIERVRDELAAYVRAGR
Ga0062594_10015577113300005093SoilGGGVSTAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVRESEQAA*
Ga0066672_1003489923300005167SoilMSFRELDDLVLHLKGLVLVRKLRERNGAEAGELAMYGAEIERVHESLARYGLPHP*
Ga0066677_1030038423300005171SoilVTSFRELDDLVLHLKGLVLVRKLRERSGAEATELALYGAEIERVRERLAEVAKAKAA*
Ga0066671_1028998523300005184SoilVKSFRELDDLVLHLKGLVLVRKLRERSGAEPTELAMYGAEIERVRERLAGFVDQARLA*
Ga0066671_1064103413300005184SoilSFRELDDLVLHLKGLVLVRKLRERSGAEATELALYGAEIERVRERLAEVAKAKAA*
Ga0066388_10009477343300005332Tropical Forest SoilVSTAMAPSFRELDDLVLHLKGLVLVRGVRAERGADDDELAMYGAEIDRVRDRLASLVKRSQAA*
Ga0066388_10068772053300005332Tropical Forest SoilELDDLVLHLKGLVLVQGVREQGGADDDELAMYGDEIARVREQLASYVRSAAR*
Ga0066388_10449251623300005332Tropical Forest SoilVSAAMQNFRELDDLVLHLKGLVLVRGVREQRGADADELAMYGAEIDRVRDRLAAVVRQSEQAA*
Ga0070680_10043154323300005336Corn RhizosphereMNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIARVRDQLAEYVRDAGR*
Ga0070682_10000673713300005337Corn RhizosphereFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIERVRDQLAEYVRDAGR*
Ga0068868_10241422913300005338Miscanthus RhizosphereVSTAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVREAEQAA*
Ga0070671_10076844223300005355Switchgrass RhizosphereVSTAVKSFRELDDLVLHLKGLVLVRRVREEGGADEDELGMYRAEIDRVRDELAAYLRGAGR*
Ga0070709_1007608463300005434Corn, Switchgrass And Miscanthus RhizosphereGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIARVRDQLAEYVRDAGR*
Ga0070710_1005236323300005437Corn, Switchgrass And Miscanthus RhizosphereMSAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIERVRKQLAEYVRGAAR*
Ga0070705_10192896413300005440Corn, Switchgrass And Miscanthus RhizosphereVSFRELDELVLHLKGLVLVRKLRERDGAEEDELAMYRAEIERVREQLAAAAKLQAA*
Ga0070708_10004015613300005445Corn, Switchgrass And Miscanthus RhizosphereMGAGAKSFRELDDLVLHLKGLVLVRSLRERRGAEEEELEMYGAEIDRVRDQLAELVRSDQRAAA*
Ga0066687_1083827523300005454SoilMTSFRELDDLVLHLKGLVLVRKLRERNGAETTELAMYGAEIDRVRERLA
Ga0068853_10185089023300005539Corn RhizosphereVSTAVKSFRELDDLVLHLKGLVLVRRVREEGGADEDELGMYRAEIDRVRDELA
Ga0070686_10010192433300005544Switchgrass RhizosphereMNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDQELAQYGAEIERVRDQLAEYVRDAGR*
Ga0070704_10137538713300005549Corn, Switchgrass And Miscanthus RhizosphereELDDLVLHLKGLVLVRKVQETRGAGQDELHMYGAEIERVRDRLAELVRAGA*
Ga0070664_10013414543300005564Corn RhizosphereGSVTGEISKFHELDDLVLHLKGLVLVRKVREARGAEADELDLYGAEIERVRNRLADVVKTSD*
Ga0070702_10097546923300005615Corn, Switchgrass And Miscanthus RhizosphereMNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIEGVRDQLAEYVRDAGR*
Ga0066905_10003755153300005713Tropical Forest SoilMSPALQSFRELDDLVLHLKGLVLVRGVREERGADDDELAMYGAEIDRVRDRLAAVVRASEQAA*
Ga0066905_10028333333300005713Tropical Forest SoilMSFATQGFRDLDDLVLHLKGLVLVRGVREERGADADELAMYGEEIDRVRDRLADLVRATPQAA*
Ga0066903_10029649733300005764Tropical Forest SoilMSAAVQGFRELDDLVLHLKGLVLVQGVRERGGADADELDMYGAEIDRVRQQLAEYVRSAAR*
Ga0066903_10228368723300005764Tropical Forest SoilMSAAVRGFRELDDLVLHLKGLVLVQGVREQGGADALELEMYGAEIDRVRDQLAEYVRGAGR*
Ga0068870_1039824923300005840Miscanthus RhizosphereMNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIERVRDQLAEYVRDAGR*
Ga0081455_1000083683300005937Tabebuia Heterophylla RhizosphereVSPALQGFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAAVVRESEQAA*
Ga0081455_1080000713300005937Tabebuia Heterophylla RhizosphereMTVIEYAFRELDDLVLHLKGLVLVHRMREQRGADDSELAMFRAEIDRVRDRLAHIVRAGEEVLA*
Ga0081540_1002691213300005983Tabebuia Heterophylla RhizosphereMSPALQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDQLAAVVRASEQAA*
Ga0081539_1014365833300005985Tabebuia Heterophylla RhizosphereMTPFRDLDDLVLHLKGLVLVQELRRDRGADESELMMYGAEIERVRSQLADFLKAAA*
Ga0066696_1090364723300006032SoilMAAFRELDDLVLHLKGLVLVRKVRERNGADKGELEMYRAEIERVRERLADFV
Ga0075432_1001415923300006058Populus RhizosphereVSTAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGVEIDRVRDRLAALVRESEQAA*
Ga0079220_1024089123300006806Agricultural SoilVSAAPQGFRELDDLVLHLKGLVLVQGVRERSGADDLELEMYGAEIDRVRAQLAEYVSGAGR*
Ga0079220_1038054723300006806Agricultural SoilVSAAVESFRDLDDLVLHLKGLVLVRGVRERGGADASELAMYRDEIDRIREQLADFVRGAEG*
Ga0075425_10026040423300006854Populus RhizosphereMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGVEIDRVRDRLAALVRESEQAA*
Ga0075434_10057284713300006871Populus RhizosphereAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGVEIDRVRDRLAALVRESEQAA
Ga0075434_10180541513300006871Populus RhizosphereVSADVQSFRELDDLVLHLKGLVLVRRLRERGGADDSELVMYGAEIDRVREQLAGLVARSAAA*
Ga0068865_10113787813300006881Miscanthus RhizosphereVIGEISKFHELDDLVLHLKGLVLVRKVREARGAETDELDLYGAEIERVRNRLA
Ga0079219_1094751413300006954Agricultural SoilVSAAPQGFRELDDLVLHLKGLVLVQGVRERSGADELELEMYGAEIDRVRAELAEYVRGA
Ga0066710_10063483923300009012Grasslands SoilMDHSFRQLDDLVLNLKGLVLVPDLRARDGAAPEELDMYRAEIDRVRDRLADLVRADEAQPAAA
Ga0066710_10162494013300009012Grasslands SoilMDHSFRELDDLVLHLKGLVLVRKLRERRGADAGELAMYGMEIDRVRERLASLVRTGQRQAAA
Ga0099827_1068560923300009090Vadose Zone SoilMAHARGFRELDDLVLHLKGLVLVRRFRERQGADDGELLMYGDEIDRVREQLVNLVRFG*
Ga0111539_1276733423300009094Populus RhizosphereTAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVRESEQAA*
Ga0066709_10177550223300009137Grasslands SoilMDHSFRELDDLVLDLKGLVLVRKLRERRGADAGELAMYALEIDRVRERLANLVRTGQQQAAA*
Ga0114129_1083922013300009147Populus RhizosphereGRGERAFDRAGPGRIRGGGVSTAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVRESEQAA*
Ga0126313_1004458723300009840Serpentine SoilVSPATQGFRELDDLVLHLKGLVLVRAVREERGADTDELAMYGAEIDRVRDRLAAVVRETEQAA*
Ga0126313_1016514023300009840Serpentine SoilMHGFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIERVRDRLAAVVRETQQAA*
Ga0126315_1017973913300010038Serpentine SoilATQGFRELDDLVLHLKGLVLVRAVREERGADTDELAMYGAEIDRVRDRLAAVVRETEQAA
Ga0126308_1013602123300010040Serpentine SoilVTVDISKFHELDDLVLHLKGLVLVRKVREARGAEADELDLYGAEIERIRNRLAHVVKTSD
Ga0126312_1001063633300010041Serpentine SoilVSPATQAFRELDDLVLHLKGLVLVRAVREERGADTDELAMYGAEIDRVRDRLAAVVRETEQAA*
Ga0126380_1172191213300010043Tropical Forest SoilVTAVAAQGFRELDDLVLHLKGLVLVQGVRERGGADDDELAMYGVEIDRVREQLASYVRSAAR*
Ga0126311_1017566723300010045Serpentine SoilVSPATQGFHELDDLVLHLKGLVLVRAVREERGADTDELAMYGAEIDRVRDRLAAVVRETEQAA*
Ga0134111_1048753713300010329Grasslands SoilMEHSFRQLDDLVLNLRGLVLVRDLRERDGAATEELDMYGAEIDRVRDRLASFVRYGRAHQAA*
Ga0126376_1101579523300010359Tropical Forest SoilVSPVAQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLATVVRESEQAA*
Ga0126376_1319621223300010359Tropical Forest SoilVTAVAAQGFRELDDLVLHLKGLVLVQGVRERGGADDDELAMYGAEIARVREQLASYVRSAAR*
Ga0126372_1039489723300010360Tropical Forest SoilVSTAVQGFRELDDLVLHLKGLVLVQGVREQGGADDDELAMYGDEIARVREQLASYVRSAAR*
Ga0126377_1069204723300010362Tropical Forest SoilMSPALQSFRELDDLVLHLKGLVLVRGVREQRGADDDELAMYGAEIDRVRDRLAAVVRASEQAA*
Ga0126377_1182224323300010362Tropical Forest SoilMSAAVQGFRELDDLVLHLKGLVLVQGVREQGGADELELEMYGAEINRVRDQLAEYVRGAGR*
Ga0105246_1030751123300011119Miscanthus RhizosphereMNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADELELAQYGAEIERVRDQQAEYVRDAGR*
Ga0137372_1050758123300012350Vadose Zone SoilMDHSFRELDDLVLHLKGLVLVRKLRERRGADAGELAIYGMEIDRVRERLANLVKTGQQQAAA*
Ga0137372_1083521723300012350Vadose Zone SoilMGQSFLELDDLVLQLKGLVLVSKVRERHGADTGELAMYSVEIDRVRDRLANLMRSVGLDQAVA*
Ga0137366_1066806323300012354Vadose Zone SoilELDDLVLHLKGLVLVRKLREQGGADEGELLMYGAEIDRLGGRLAELARASNEQVHGERAA
Ga0137371_1026304043300012356Vadose Zone SoilMDHSFSELDDLVLHLKGLVLVRKYRERRGADAGELAMYSLEIDRVRELLANLVKTGQRQAA*
Ga0157316_102417323300012510Arabidopsis RhizosphereMQSFRELDDLVLDLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVRESEQAA*
Ga0157296_1003434343300012905SoilRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVRESEQAA*
Ga0157298_1005939523300012913SoilMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLPALVRESEQAA*
Ga0164299_1092159223300012958SoilMNAAVQGFRELDDLVLHLKGLVILQGLREQSGADDLELAQYGAEIERVRDQLAEYVRDAGR*
Ga0182008_1097301723300014497RhizosphereRELDDLVLHLKGLVLVRKLRERSGAEPTELAMYGAEIERVRERLAGFVDQARLA*
Ga0157376_1003181823300014969Miscanthus RhizosphereMNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIERVSDQLAEYVRDAGR*
Ga0132258_1127932123300015371Arabidopsis RhizosphereVSAAVVGPSFRELDDLVLHLKGLVLVRGVRAEGGADAAELAMYAAEIDRVRDRLASIVRSQAA*
Ga0132255_10419559223300015374Arabidopsis RhizosphereVSAAVAVPSFRELDDLVLHLKGLVLVRGVRAEGGADADELAMYGAEIERVRDRLASIVRS
Ga0184605_1007144223300018027Groundwater SedimentVIAETSGFRELDDLVLHLKGLVLVRKVREARGADVAELELYGVEIDRVRDRLAEFVKTSVQAAA
Ga0184619_1000907423300018061Groundwater SedimentMAETSGFRELDDLVLHLKGLVLVRKVREARGADVAELELYGVEIDRVRDRLAEFVKTSVQAAA
Ga0184635_1016769223300018072Groundwater SedimentMTAAVAQGFRELDDLVLHLKGLVLVRGVREQGGADADELEMYRAEIDRVRDRLASVVKETRAA
Ga0184624_1045489413300018073Groundwater SedimentMGELSKFRELDDLVLHLKGLVLVRKVREARGADADELEMYGAEIDRVRNRLAEFVRAGAQTEYSRA
Ga0066662_1000736443300018468Grasslands SoilMSFRELDDLVLHLKGLVLVRKLRERNGAEAGELAMYGAEIERVHESLARYGLPHP
Ga0173481_1002565323300019356SoilVSTAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVRESEQAA
Ga0173481_1038171323300019356SoilVSAAVYGFRELDDLVLHLKGLVLVRGVRAEGGADEEELAMYGAEIDRVRDRLAAFVQEAQAA
Ga0182009_1018182623300021445SoilVSTAVKSFRELDDLVLHLKGLVLVQRVREEGGADEAELGMYRAEIDRVRDELAEYLRGAG
Ga0247796_101290923300023261SoilVSTAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVREQLAAFVKEAEAAAAEAA
Ga0247686_100618923300024177SoilMNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIARVRDQLAEYVRDAG
Ga0247693_107293613300024181SoilMSAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIERVRDRLAEYVRGAG
Ga0247664_116925323300024232SoilMTSFRELDDLVLHLKGLVLVRKLRERNGAETTELAMYGAEIDRVRERLAELVQGEAPQAA
Ga0247677_101125223300024245SoilVSTAVKSFRELDDLVLHLKGLVLVRRVREEGGADEDELGMYRAEIDRVRDELAAYLRGAG
Ga0247681_101727133300024310SoilKSFRELDDLVLHLKGLVLVRRVREEGGADEDELGMYRAEIDRVRDELAAYLRGAGR
Ga0207699_1030363323300025906Corn, Switchgrass And Miscanthus RhizosphereMTSFRELDDLVLHLKGLVLVRKLRERNGAETTELAMYGAEIDRVRERLAQVMQGEASQAA
Ga0207684_1019366923300025910Corn, Switchgrass And Miscanthus RhizosphereMGAGAKSFRELDDLVLHLKGLVLVRSLRERRGAEEEELEMYGAEIDRVRDQLAELVRSDQRAAA
Ga0207649_1139433223300025920Corn RhizosphereVTGEISKFHELDDLVLHLKGLVLVRKVREARGAEADELDLYGAEIERVRNRLADVVKTSV
Ga0207652_1148590123300025921Corn RhizosphereGGMNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIERVRDQLAEYVRDAGR
Ga0207704_1142591313300025938Miscanthus RhizosphereVIGEISKFHELDDLVLHLKGLVLVRKVREARGAEADELDLYGAEIERVRNRLAEVVKTSN
Ga0207665_1125526723300025939Corn, Switchgrass And Miscanthus RhizosphereVSFRELDDLVLHLKGLVLVRKLRARDGAEEDELAMYGAEIERVREQLAAVAKL
Ga0207665_1160417323300025939Corn, Switchgrass And Miscanthus RhizosphereVTSFRELDDLVLHLKGLVLVRKLRERNGAEDAELAMYGEEIERVRERLADLVKLQAA
Ga0207661_1015945143300025944Corn RhizosphereGNRPRGGSVTGEISKFHELDDLVLHLKGLVLVRKVREARGAEADELDLYGAEIERVRNRLADVVKTSD
Ga0207679_1081880113300025945Corn RhizosphereMNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIDRVRDQLAEYVRDAG
Ga0207702_1064372833300026078Corn RhizosphereVSTAVKSFRELDDLVLHLKGLVLVQRVREEGGADEAELGMYRAEIDRVRDELAAYLRGAG
Ga0207674_1007230343300026116Corn RhizosphereVTGEISKFHELDDLVLHLKGLVLVRKVREARGAEADELDLYGAEIERVRNRLADVVKTSD
Ga0209027_100299763300026300Grasslands SoilVTSFRELDDLVLRLKGLVLVRKLRERGGAETTELAMYGEEIERVRERLAAAVK
Ga0207635_101269413300027485SoilVSTAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRL
Ga0209073_1040030823300027765Agricultural SoilVSAAVESFRDLDDLVLHLKGLVLVQGVRERSGADELELEMYGAEIDRVRAELAEYVRGAG
Ga0209590_1070351623300027882Vadose Zone SoilMAHARGFRELDDLVLHLKGLVLVRRFRERQGADDGELLMYGDEIDRVREQLVNLVRFG
Ga0207428_10004473143300027907Populus RhizosphereVSTAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGVEIDRVRDRLAALVRESEQAA
Ga0247684_102101623300028138SoilMNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIERVRKQLAEYVRGAA
Ga0247828_1066233423300028587SoilMSPAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVRESEQAA
Ga0307319_1026788523300028722SoilMGELSKFRELDDLVLHLKGLVLVRKVREARGADADELEMYGAEIDRVRNRLAEFVR
Ga0307282_1024551023300028784SoilMAETSGFRELDDLVLHLKGLVLVCKVREARGADVAELELYGVEIDRVRDRLAEFVKTSVQAAA
Ga0307287_1003114623300028796SoilMGELSKFRELDDLVLHLKGLVLVRKVREARGADADELQMYGAEIDRVRNRLAEFVRAGAQTEYSRA
Ga0310907_1085312023300031847SoilMSAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIERVRDQLAEYVRDAG
Ga0307409_10018902223300031995RhizosphereVSPATQGFGFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVRETEQAA
Ga0308176_1108813023300031996SoilAEGGGVTAAGYGFRELDDLVLHLKGLVLVRGVREQGGADEEELAMYGAEIDRVRDRLAAFVREAEAA
Ga0307416_10042385623300032002RhizosphereVSPATQGFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVRETEQAA
Ga0310897_1022191923300032003SoilMNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIERVRDQLAEYARDAG
Ga0310899_1009666723300032017SoilMTAAVQGYRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIERVRDQLAEYVRDAG
Ga0307415_10012571213300032126RhizosphereVSPATQGFRELDDLVLHLKGLVLVRAVREERGADTDELAMYGAEIDRVRDRL
Ga0311301_1005035473300032160Peatlands SoilMDRPFRELDDLVLHLKGLVLVRSLRERKGADRNELDMYGAEIERTRDRLASFLRRDHELSAA
Ga0373948_0108887_155_3403300034817Rhizosphere SoilMSAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELGQYGAEIERVRDQLAEYVRDAG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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