Metagenome Family F063561

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063561
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	62 residues
Representative Sequence	MANPATNTKRLTTLILWAIAWAAAMIASAILLKGNPIKDWVQAALFIGAMTFWVWQSQRASSK
Number of Associated Samples	100
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	48.06 %
% of genes near scaffold ends (potentially truncated)	18.60 %
% of genes from short scaffolds (< 2000 bps)	85.27 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.124 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (29.457 % of family members)
Environment Ontology (ENVO)	Unclassified (41.860 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.34% β-sheet: 0.00% Coil/Unstructured: 40.66%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF01595	CNNM	8.53
PF05977	MFS_3	4.65
PF05199	GMC_oxred_C	3.10
PF06452	CBM9_1	3.10
PF00534	Glycos_transf_1	2.33
PF02777	Sod_Fe_C	1.55
PF07883	Cupin_2	1.55
PF01039	Carboxyl_trans	1.55
PF08281	Sigma70_r4_2	0.78
PF02423	OCD_Mu_crystall	0.78
PF13545	HTH_Crp_2	0.78
PF03459	TOBE	0.78
PF13620	CarboxypepD_reg	0.78
PF00230	MIP	0.78
PF01435	Peptidase_M48	0.78
PF13360	PQQ_2	0.78
PF02583	Trns_repr_metal	0.78
PF07485	DUF1529	0.78
PF05163	DinB	0.78
PF13431	TPR_17	0.78
PF00589	Phage_integrase	0.78
PF03471	CorC_HlyC	0.78
PF03965	Penicillinase_R	0.78
PF01610	DDE_Tnp_ISL3	0.78
PF14206	Cys_rich_CPCC	0.78
PF05231	MASE1	0.78
PF07730	HisKA_3	0.78
PF13442	Cytochrome_CBB3	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	4.65
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	3.10
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	1.55
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	1.55
COG0605	Superoxide dismutase	Inorganic ion transport and metabolism [P]	1.55
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	1.55
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	1.55
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.78
COG1937	DNA-binding transcriptional regulator, FrmR family	Transcription [K]	0.78
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.78
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.78
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	0.78
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.78
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.78
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.78
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.78
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.78
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.78
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.12 %
Unclassified	root	N/A	3.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.12 %
Unclassified	root	N/A	3.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.12 %
Unclassified	root	N/A	3.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	48.84 %
Unclassified	root	N/A	3.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.10 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.33 %

Name	Rank	Taxonomy	Distribution
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	22.48 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	16.28 %
Unclassified	root	N/A	3.88 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	18.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.28 %
Unclassified	root	N/A	3.88 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2.33 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	1.55 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.78 %

Name	Rank	Taxonomy	Distribution
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	18.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.28 %
Unclassified	root	N/A	3.88 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	2.33 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	1.55 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	18.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.28 %
Unclassified	root	N/A	3.88 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	2.33 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	1.55 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.78 %
Hypericibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Hypericibacter	0.78 %

Name	Rank	Taxonomy	Distribution
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	18.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.28 %
Unclassified	root	N/A	3.88 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	2.33 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.55 %
Hypericibacter terrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Hypericibacter → Hypericibacter terrae	0.78 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	18.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.28 %
Unclassified	root	N/A	3.88 %
Singulisphaera acidiphila	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	2.33 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.55 %
Hypericibacter terrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Hypericibacter → Hypericibacter terrae	0.78 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886013\|SwBSRL2_contig_3220764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1974	Open in IMG/M
3300000559\|F14TC_101881570	All Organisms → cellular organisms → Bacteria	1481	Open in IMG/M
3300002886\|JGI25612J43240_1038423	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	689	Open in IMG/M
3300004114\|Ga0062593_100720587	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	977	Open in IMG/M
3300004156\|Ga0062589_102893068	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300004463\|Ga0063356_100745938	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300004480\|Ga0062592_100534459	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300004480\|Ga0062592_102374153	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	531	Open in IMG/M
3300004643\|Ga0062591_100317530	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300004643\|Ga0062591_102962629	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	504	Open in IMG/M
3300005289\|Ga0065704_10075565	All Organisms → cellular organisms → Bacteria	5528	Open in IMG/M
3300005289\|Ga0065704_10367938	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	789	Open in IMG/M
3300005294\|Ga0065705_10003512	All Organisms → cellular organisms → Bacteria → Proteobacteria	9627	Open in IMG/M
3300005295\|Ga0065707_10001990	All Organisms → cellular organisms → Bacteria → Proteobacteria	5990	Open in IMG/M
3300005328\|Ga0070676_11378386	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005334\|Ga0068869_100771446	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005335\|Ga0070666_11221928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300005341\|Ga0070691_10328099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300005343\|Ga0070687_100222754	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300005445\|Ga0070708_101068560	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300005451\|Ga0066681_10430907	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300005467\|Ga0070706_101216170	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300005536\|Ga0070697_101550225	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300005545\|Ga0070695_100624547	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300005553\|Ga0066695_10517533	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	731	Open in IMG/M
3300005617\|Ga0068859_100021703	All Organisms → cellular organisms → Bacteria	6443	Open in IMG/M
3300006031\|Ga0066651_10113587	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300006046\|Ga0066652_100325314	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300006791\|Ga0066653_10071177	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300006844\|Ga0075428_101098923	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300006853\|Ga0075420_100517736	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300006854\|Ga0075425_101971394	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300009012\|Ga0066710_100526808	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1785	Open in IMG/M
3300009090\|Ga0099827_11395122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300009100\|Ga0075418_10268504	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1817	Open in IMG/M
3300009137\|Ga0066709_103425472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300009147\|Ga0114129_13268213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300009176\|Ga0105242_11424745	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300009789\|Ga0126307_10206301	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1577	Open in IMG/M
3300009840\|Ga0126313_10121158	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1947	Open in IMG/M
3300010036\|Ga0126305_10138770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Hypericibacter → Hypericibacter terrae	1502	Open in IMG/M
3300010036\|Ga0126305_10280449	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300010036\|Ga0126305_10695683	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300010037\|Ga0126304_10332479	Not Available	1009	Open in IMG/M
3300010037\|Ga0126304_10517076	All Organisms → cellular organisms → Bacteria → Acidobacteria	802	Open in IMG/M
3300010038\|Ga0126315_10377442	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300010039\|Ga0126309_10130023	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300010039\|Ga0126309_10385415	All Organisms → cellular organisms → Bacteria → Acidobacteria	835	Open in IMG/M
3300010042\|Ga0126314_10607905	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300010042\|Ga0126314_10891772	All Organisms → cellular organisms → Bacteria → Acidobacteria	657	Open in IMG/M
3300010042\|Ga0126314_11531965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300010044\|Ga0126310_10344433	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300010044\|Ga0126310_11379745	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300010045\|Ga0126311_10296561	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300010045\|Ga0126311_10363906	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1105	Open in IMG/M
3300010045\|Ga0126311_10753242	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300010329\|Ga0134111_10359660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300010337\|Ga0134062_10330093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300010364\|Ga0134066_10281216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300010397\|Ga0134124_10439235	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1250	Open in IMG/M
3300010399\|Ga0134127_11588112	Not Available	728	Open in IMG/M
3300010400\|Ga0134122_10240074	All Organisms → cellular organisms → Bacteria	1525	Open in IMG/M
3300010403\|Ga0134123_10021460	All Organisms → cellular organisms → Bacteria	4575	Open in IMG/M
3300010403\|Ga0134123_10137747	All Organisms → cellular organisms → Bacteria → Acidobacteria	2001	Open in IMG/M
3300012198\|Ga0137364_10216175	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300012198\|Ga0137364_10334310	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300012200\|Ga0137382_10433022	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	929	Open in IMG/M
3300012200\|Ga0137382_10952940	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	617	Open in IMG/M
3300012200\|Ga0137382_11175504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300012203\|Ga0137399_10247612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1461	Open in IMG/M
3300012204\|Ga0137374_10002418	All Organisms → cellular organisms → Bacteria	21917	Open in IMG/M
3300012204\|Ga0137374_10002829	All Organisms → cellular organisms → Bacteria	20340	Open in IMG/M
3300012204\|Ga0137374_10005207	All Organisms → cellular organisms → Bacteria	15465	Open in IMG/M
3300012205\|Ga0137362_11294518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300012206\|Ga0137380_11498698	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	559	Open in IMG/M
3300012207\|Ga0137381_10525435	All Organisms → cellular organisms → Bacteria → Acidobacteria	1032	Open in IMG/M
3300012208\|Ga0137376_10119714	All Organisms → cellular organisms → Bacteria → Acidobacteria	2245	Open in IMG/M
3300012208\|Ga0137376_10601487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300012208\|Ga0137376_11592467	Not Available	544	Open in IMG/M
3300012212\|Ga0150985_118683717	Not Available	602	Open in IMG/M
3300012350\|Ga0137372_10325055	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300012350\|Ga0137372_10947928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300012351\|Ga0137386_10900510	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	634	Open in IMG/M
3300012355\|Ga0137369_10835241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300012360\|Ga0137375_10915930	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	695	Open in IMG/M
3300012362\|Ga0137361_10193386	All Organisms → cellular organisms → Bacteria	1837	Open in IMG/M
3300012362\|Ga0137361_10400021	All Organisms → cellular organisms → Bacteria → Acidobacteria	1261	Open in IMG/M
3300012362\|Ga0137361_11859914	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	519	Open in IMG/M
3300012363\|Ga0137390_11646900	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300012469\|Ga0150984_112396311	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	592	Open in IMG/M
3300012685\|Ga0137397_10298612	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300012917\|Ga0137395_10833734	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	668	Open in IMG/M
3300012917\|Ga0137395_11294645	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	504	Open in IMG/M
3300012918\|Ga0137396_10193408	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300012922\|Ga0137394_10476299	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300012922\|Ga0137394_10493307	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300012929\|Ga0137404_10518543	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300012944\|Ga0137410_12024943	Not Available	512	Open in IMG/M
3300012951\|Ga0164300_10544159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300012957\|Ga0164303_10717384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300012958\|Ga0164299_10042126	All Organisms → cellular organisms → Bacteria → Acidobacteria	2075	Open in IMG/M
3300012961\|Ga0164302_11433514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300013308\|Ga0157375_10072022	All Organisms → cellular organisms → Bacteria	3471	Open in IMG/M
3300013308\|Ga0157375_13074876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300014157\|Ga0134078_10456304	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	585	Open in IMG/M
3300014166\|Ga0134079_10068555	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300014326\|Ga0157380_11591919	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300015245\|Ga0137409_10267048	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300015371\|Ga0132258_10012280	All Organisms → cellular organisms → Bacteria	18002	Open in IMG/M
3300015371\|Ga0132258_10221473	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	4604	Open in IMG/M
3300015371\|Ga0132258_11989892	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1462	Open in IMG/M
3300015372\|Ga0132256_100405568	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1466	Open in IMG/M
3300015373\|Ga0132257_100054062	All Organisms → cellular organisms → Bacteria → Acidobacteria	4483	Open in IMG/M
3300018482\|Ga0066669_10342640	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1237	Open in IMG/M
3300020170\|Ga0179594_10049501	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300025907\|Ga0207645_10788587	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300025910\|Ga0207684_10380246	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1214	Open in IMG/M
3300025910\|Ga0207684_11413703	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300025931\|Ga0207644_10016618	All Organisms → cellular organisms → Bacteria → Proteobacteria	4953	Open in IMG/M
3300026377\|Ga0257171_1004483	All Organisms → cellular organisms → Bacteria	2152	Open in IMG/M
3300027655\|Ga0209388_1005753	All Organisms → cellular organisms → Bacteria → Acidobacteria	3193	Open in IMG/M
3300027875\|Ga0209283_10264063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1140	Open in IMG/M
3300028536\|Ga0137415_10105778	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2664	Open in IMG/M
3300031548\|Ga0307408_100228111	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1523	Open in IMG/M
3300031731\|Ga0307405_10449681	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1021	Open in IMG/M
3300031740\|Ga0307468_102231301	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	530	Open in IMG/M
3300031901\|Ga0307406_10331452	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300031903\|Ga0307407_10832125	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	704	Open in IMG/M
3300031995\|Ga0307409_100306450	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1480	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.74%
Host-Associated	Host-Associated	23.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.74%
Plants	Host-Associated → Plants	23.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.85%
Loam	Environmental → Terrestrial → Soil → Loam	6.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.33%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	56.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.46%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	13.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.10%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.10%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwBSRL2_0351.00001230	2162886013	Switchgrass Rhizosphere	MVTSSEQSSTKLVLWALAWAAAMIGSAIVLKGNPIKDWFQAALFIGAMTFWLWQSRRAAC
F14TC_1018815702	3300000559	Soil	MITSNKSLAKLVLWAVAWSIALIGSAFVLKGNPLKDWIQAALFIAAMTFWLWQSQRVARN
JGI25612J43240_10384231	3300002886	Grasslands Soil	MADAKTKLITLILWAGAWAAALIASAVLLKGNPIKDWIQSALFIGAMTFWVWQSQRAAKR
Ga0062593_1007205872	3300004114	Soil	MSTSRKQLTNLILWAIVWAVAMIASAILLKGNPTKDWIQSTLFIAAMTFWVWKSQRSSAD
Ga0062589_1028930681	3300004156	Soil	MTTLILWAIAWAVAMIVSAILLKGNPVKDWVQAALFIGAMTFWVWQSQRTPGR*
Ga0063356_1007459382	3300004463	Arabidopsis Thaliana Rhizosphere	MSAPRAQLRTLILWAIAWAAAMIATAFFLKGNAIKDWIQSALFIAAMTFWVWQSHRATRK
Ga0062592_1005344591	3300004480	Soil	MATSTTRLNALILWAIAWAGAMIASAIVLKGNPIKDWIQSALFIAAMSFWVWQAQRAARK
Ga0062592_1023741531	3300004480	Soil	MPTTRTRLTALVLWAIAWAAAMIASAILLKGNPIKDWIQWALFIAAMTFWVWQSQRSARK
Ga0062591_1003175302	3300004643	Soil	MATSRLTTLVLWAVAWAAAMIASAILLKGNPIKDWIQSALFIAAMTFWVWQSQRSSAD*
Ga0062591_1029626291	3300004643	Soil	VDPGRIMFTTRTRLTALVLWAIAWAAAMIASAILLKGNPIKDWIQSALFIAAMTFWVWQSQRSARK*
Ga0065704_100755652	3300005289	Switchgrass Rhizosphere	MATSRKQLTTLIVWAIAWAAAMIVPAVLLKGNRIKDWIQSALFIAAMTFWVWQTQRSSAK
Ga0065704_103679381	3300005289	Switchgrass Rhizosphere	MATSRLTTLVLWAVAWAAAMIASAILLKGNPIKDWIQSALVIAAMTFWVWQSQRSSAE*
Ga0065705_100035127	3300005294	Switchgrass Rhizosphere	MATSRKQLTTLIVWAIAWAAAMIVSAVLLKGNRIKDWIQSALFIAAMTFWVWQTQRSSAK
Ga0065707_100019905	3300005295	Switchgrass Rhizosphere	MATSRKQLTTLIVWAIAWAAAMIVSAVLLKGNRIKDWIQSALFIAVMTFWVWQTQRSSAK
Ga0070676_113783862	3300005328	Miscanthus Rhizosphere	MTTLILWAIAWAVAMIGSAILLKGNPVKDWVQAALFIGAMTFWVWQSQRTPGR*
Ga0068869_1007714463	3300005334	Miscanthus Rhizosphere	MATSTTRLNALILWAIAWAGAMIASAIVLKGNPIKDWIQSALFIAAMSFWVWQAQRAA
Ga0070666_112219281	3300005335	Switchgrass Rhizosphere	MTTTSQSSFTRLVIWAVAWSAALIGSAVVLKGNPLKDWIQAALFVGAMTFWLW
Ga0070691_103280992	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MATTAKKRLTALILWALIWAAAMIASAFFLKGNPSKDWIQSALFIAAMTFWVWQSQRLAGK*
Ga0070687_1002227542	3300005343	Switchgrass Rhizosphere	MTASKKSKMSTMIMWALFWAIAMIGSAIIFKGSAVKDWVQSALFIASLTFWLFQSQRAARCP*
Ga0070708_1010685602	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTNSSTKRLTALILWAVVWAVAMIASAILLKGNPIKDWVQAALFIGAMTFWVWQSQRASGK*
Ga0066681_104309071	3300005451	Soil	MANPSTNTKRLTTLILWAIAWAAAMIASAILLKGNPIKDWVQAALFIGAMTFWVWQSQHAAGR*
Ga0070706_1012161702	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTNTSTNSKQLSTLILWAIAWAAALIASAFLLKGNPIKDWVQAALFIAAMTFWVWQSQRASAG*
Ga0070697_1015502251	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTELVFWAIAWSAAMIGSAIVLKGNPLKDWIQAALFIGAMTFWLWQVQRVNRN*
Ga0070695_1006245472	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MTQTSTKRMTTLILWAIAWAVAMIVSAILLKGNPVKDWVQAALFIGAMTFWVWQSQRTPGR*
Ga0066695_105175332	3300005553	Soil	MANPSTNTKRLTTLILWAIAWAAAMTASAILLKGNPIKDWVQAVLFIGAMTFWV*
Ga0068859_1000217033	3300005617	Switchgrass Rhizosphere	MVTSSEQSSTKLVLWALAWAAAMIGSAIVLKGNPIKDWFQAALFIGAMTFWLWQSRRAACN*
Ga0066651_101135873	3300006031	Soil	MANPSTNTKRLTTLILWAIAWAAAMIASAILLKGNPIKDWVQAVLFIGAMTFWVWQSTRASIR*
Ga0066652_1003253142	3300006046	Soil	MVKRNTAKEQPIANPSTNTKRLTALILWAIAWAVAMIASAILLKGNPIKDWVQAVLFIGAMTFWVWQSTRASIR*
Ga0066653_100711772	3300006791	Soil	MANPATNTKRLTTLILWAIAWAAAMIASAILLKGNPIKDWVQAALFIGAMTFWVWQSQRASSK*
Ga0075428_1010989232	3300006844	Populus Rhizosphere	MVTSSEQSSTKLVLWALAWAAAMIGSAIVLKGNPIKDWFQAALFIGAMTFWLWQSRRATCN*
Ga0075420_1005177362	3300006853	Populus Rhizosphere	MGTSSEQSSTKLVLWALAWAVAMIGSAIVLKGNPIKDWFQAALFIGAMTFWLWQSRRAACN*
Ga0075425_1019713942	3300006854	Populus Rhizosphere	VTPDTPRTKLSALVLWALAWAVAMIVVAIVLKGNPIKDWVQAALFIAAMTFWVWQSERAAKR*
Ga0066710_1005268082	3300009012	Grasslands Soil	MANSSTNTKRLTTLILWAIAWAAAMIASAILLKGNPIKDWVQAVLFIGAMTFWVWQSQQASSK
Ga0099827_113951221	3300009090	Vadose Zone Soil	RFRTEDSRSILVVKRNTGKEQPMANPSTNTKRLTTLILWAIVWAAAMIASAILLKGNPIKDWVQAVLFIGAMTFWVWQSQQASSK*
Ga0075418_102685041	3300009100	Populus Rhizosphere	MGTSSEQSSTKLVLWALAWAAAMIGSAIVLKGNPIKDWFQAALFIGAMTFWLWQSRRAACN*
Ga0066709_1034254723	3300009137	Grasslands Soil	TKRLTTLILWAIAWAAAMIASAILLKGNPVKDWVQAALFIGAMTFWVWQSQQASSK*
Ga0114129_132682131	3300009147	Populus Rhizosphere	MVTSSEQSSTKLVLWALAWAAAMIGSAIVLKGNPIKDWFQAALFIGAMTFWLWQSRRA
Ga0105242_114247451	3300009176	Miscanthus Rhizosphere	MTTLILWAIAWAVAMIRSAILLKSNPVKDWVQAALFIGAMTFWVWQSQ
Ga0126307_102063012	3300009789	Serpentine Soil	VAASTAKLTILIGWAIVWAALMIASAILLKGNPIKDWIQSALFIAAMTFWVWQSHRTARK
Ga0126313_101211582	3300009840	Serpentine Soil	VAASRAKLTTLIGGAIVWAALMIAVAILLKGNPIKDWIQSALFIAAMTFWVWQSHRTARN
Ga0126305_101387703	3300010036	Serpentine Soil	VAASTAKLTTLIGWAIAWSGAMIASAIFLKGNPIKDWIQSALFIAAMTFWVCQSHRPARK
Ga0126305_102804491	3300010036	Serpentine Soil	VAASTAKLTNLIGWAIVWAALMIASAILLKGNPIKDWIQSALFIAAMTFWV
Ga0126305_106956832	3300010036	Serpentine Soil	VATPIAKLTTLIGWAIVWAALMIASAILLKGNSIKDWIQSALFIAAMTFWVWQSHRITRN
Ga0126304_103324792	3300010037	Serpentine Soil	MPSPYHARLTTLVLWAIAWSAAMIASAILLKGNPTKDWIQAALFIGAMTFWVWQSQRASCK*
Ga0126304_105170761	3300010037	Serpentine Soil	VAASTAKLTILIGWAIVWAALMIASAILLKGNPIKDWIQSALFIAAMTFWVWQSHRTTRK
Ga0126315_103774422	3300010038	Serpentine Soil	VAASTAKLTILIGWAMVWAALMIASAILLKGNPIKDWIQSALFIAAMTFWVWQSHRTARK
Ga0126309_101300232	3300010039	Serpentine Soil	VAASTPKLTTLIGWAIAWAAAMIASAILLKGNPIKDWIQSALFIAAMTFWVWQSHRTARK
Ga0126309_103854152	3300010039	Serpentine Soil	RTQVAASTAKLTTLIGWAIVWAALMIASAILLKGNPIKDWIQSALFIAAMTFWVWQSHRTARK*
Ga0126314_106079052	3300010042	Serpentine Soil	VAASLAKLTTLIGWAIVWAALMIASAILLKGNPIKDWIQSALFIAAMTFWVWQSHRTARK
Ga0126314_108917722	3300010042	Serpentine Soil	VAASTAKLTPLIGWAIVWAALVIASAILLKGNPIKDWIQSALFIAAMTFWVWQSLRTARK
Ga0126314_115319652	3300010042	Serpentine Soil	VAASTAKLTTLIGWAIVWAALMIASAILLKDNPIKDWIQSALFIAAMTFWVWQSHRTARQ
Ga0126310_103444331	3300010044	Serpentine Soil	VAASSAKLTTLIGWAIVWAALMIASAILLKGNPIKDWIQSALFILAMTFWVWQSHRTGRK
Ga0126310_113797451	3300010044	Serpentine Soil	TAKLTTLIGWAIAWAALMIASAILLKGNPIKDWIQSALFIAAMTFWVWQSHRTAGK*
Ga0126311_102965612	3300010045	Serpentine Soil	VAPSTAKLTILIGWAIVWAALMIASAILLKGNPIKDWIQSALFIAAMTFWVWQSHRTARK
Ga0126311_103639062	3300010045	Serpentine Soil	VAASTAKLTTLIGWAIVWAALMIASAILLKGNPIKDWIQSALFIAAMTFWVWQSHRPARK
Ga0126311_107532421	3300010045	Serpentine Soil	VAASTAKLTTLIGWAIVWAALMIASAILLKGNPIKDWIQSALFIAAMTFWVWQSHRAARK
Ga0134111_103596601	3300010329	Grasslands Soil	VKRNTGKEQPMANPSTNTKRLTTLILWAIAWAAAMIASAILLKGNPIKDWVQAALFIGAMTFWVWQSQRASSK*
Ga0134062_103300932	3300010337	Grasslands Soil	VNRNTGKEPPMANPSTNTKRLTTLILWAIAWAAAMVASAILLKGNPIKDWVQAVLFIGAMTFWVWQSQQASSK*
Ga0134066_102812161	3300010364	Grasslands Soil	VKCNPGKEQQPMANPATKTTRLTTLILWAIAWAAAMIASAILLKGNPVKDWVQAVLFIGAMTFWVWQSQRASSK*
Ga0134124_104392351	3300010397	Terrestrial Soil	MATSRLTTLVLWAVAWAAAMIASAILLKGNPIKDWIQSALFIAAMTFWVWQSKRSSAD*
Ga0134127_115881122	3300010399	Terrestrial Soil	LVLWAVAWSAALIGSAVVLKGNPLKDWIQAALFIGAMTFWLWQSQRATRH*
Ga0134122_102400742	3300010400	Terrestrial Soil	MTQSSPKRMTTLILWAIAWAVAMIVSAILLKGNPVKDWVQAALFIGAMTFWVWQSQRTPGR*
Ga0134123_100214602	3300010403	Terrestrial Soil	MAHQFKSTYENTDKERLMTNTATNSKRLPTLILWAIAWAAALIASAFLLKGNPIKDWVQAALVIAAMTFWVWQSQRVSAG*
Ga0134123_101377472	3300010403	Terrestrial Soil	VAASTAKLTTLIGWAIAWAGAMIASAILLKGNPIKDWIQSALFIAAMTFWVWQSQRAARK
Ga0137364_102161752	3300012198	Vadose Zone Soil	MNTSSKKSLTRLVLWAIAWSAALIGSAILLKGNPLKEWIQAALFIGVMTFWLWQSQRATCN*
Ga0137364_103343101	3300012198	Vadose Zone Soil	VNRKIGKEQPMANPSTNTKRLTTLILWAIAWAAAMIASAIVLKGNPIKDWVQAVLFIGAMTFWVWQSQRASSK*
Ga0137382_104330221	3300012200	Vadose Zone Soil	MTTSSKKSSTLVLWAIAWSAVMIGSAIALKGNPLKDWVQAALFISAMTFWLWQS
Ga0137382_109529402	3300012200	Vadose Zone Soil	VVNRKIGKEQPMANPSTNTKRLTTLILWAIAWAAAMIASAILLKGNPIKDWVQAVLFIGAMTFWVWQSQRASSK*
Ga0137382_111755042	3300012200	Vadose Zone Soil	MAETRTKLTTLILWAIAWAAAMIASAILLKGNPIKDWIQSALFIAAMTFWVWQSQRAARN
Ga0137399_102476123	3300012203	Vadose Zone Soil	VNRNTGKEQPMANPSTNTKRLTTLILWAIAWAAAMIASAILLKGNPIKDWVQAVLFIGAMTFWVWQSQQASSK*
Ga0137374_1000241811	3300012204	Vadose Zone Soil	MITSSKQSLTRLVLWAIAWSAAMIGSAIVLKGNALKDWIQAALFIGAMTFWLWQSQRAARN*
Ga0137374_1000282910	3300012204	Vadose Zone Soil	MANPSENKKRLTTLILWAIAWAAAMIASAILLKDNPIKDWVQAVLFIGAMTFWVWQSQQASSK*
Ga0137374_1000520711	3300012204	Vadose Zone Soil	MAKTRTKLITLILWAIAWAGAMIASAILLKGNPIKDWIQSALFIAAMTFWMWQSQRAARNR*
Ga0137362_112945181	3300012205	Vadose Zone Soil	NTRRLTTLILWAIGWAAAMIASAILLKGNPVKDWVQAALFIGAMTFWVWQSQQASSK*
Ga0137380_114986981	3300012206	Vadose Zone Soil	VKRNTGKEQPMANPSAKTKRLTTLILWAIAWAAAIIASAILLKGNPIKDWVQAALFIGAMTFWVWQS
Ga0137381_105254353	3300012207	Vadose Zone Soil	MAEARTKLITLVLWAIVWAAALIASAILLKGNPIKDWVQSALFIAAMIFWVWQSQRAARK
Ga0137376_101197142	3300012208	Vadose Zone Soil	MNPSSRKSLTRLVLWAIAWSAALIGSAILLKGNPLKDWIQAALFIGAMTFWLWQSQRATCN*
Ga0137376_106014872	3300012208	Vadose Zone Soil	MANPSTNTKRLTTLILWAIAWAAAMIASAILLKGNPVKDWVQAALFIGAMTFWVWQSQQASSK*
Ga0137376_115924671	3300012208	Vadose Zone Soil	MANPSTNTKRLTSLILWAIAWAAAMIASAILLKGNPVKEWVQAALFIGAMTFWVWQSQRVSSK*
Ga0150985_1186837171	3300012212	Avena Fatua Rhizosphere	MAEARTKLITLVLWALVWAAALIASAILLKGNPLKDWIQSALFIAAMTFWVWQSERAARK
Ga0137372_103250552	3300012350	Vadose Zone Soil	MAKTRTKLITLILWAIAWAGAMIASAILLKGNPIKDWIQSALFIAAMTFWMWQSQRAARHR*
Ga0137372_109479281	3300012350	Vadose Zone Soil	VKHNTGKEQPMDNPSTNTKRLTTLILWAIAWAAAMIASAILLKGNPIKDWVQAALFIGAMTFWVWQSQRVSRK*
Ga0137386_109005102	3300012351	Vadose Zone Soil	VKRNTGKEQPMANPSTNTKRLTTLILWAIAWAAAIIASAILLKGNPIKDWVQAALFIGAMTFWVWQSQRAAGR*
Ga0137369_108352412	3300012355	Vadose Zone Soil	MVVKWDTGKEQPMANPSTNTKRLTALILWAIAWAAALIASAILLKGNPIKDWVQAALFIGAMTFWVWQSQRAAGR*
Ga0137375_109159301	3300012360	Vadose Zone Soil	MATPKGDTTLILWAIAWAAAMIASGILLKGNPSKDWVQAALFIAAMTFWVWQASCASRS*
Ga0137361_101933862	3300012362	Vadose Zone Soil	MVSSSRTQLTTLILWAIAWAAAMIASAILLKGNPIKDWIQSALFIAAMTFWVWQSQRA
Ga0137361_104000213	3300012362	Vadose Zone Soil	MTEARTKLITLVLWAIVWAAALIASATLLKGNPIKDWVQSALFIAAMTFWVWQSQRAARK
Ga0137361_118599141	3300012362	Vadose Zone Soil	MITSSKNSFTKLVLWAIAWSAALIGSAIVLKGNPLKDWIQAALFIGAMTFW
Ga0137390_116469002	3300012363	Vadose Zone Soil	RNTGKEQPMAIPSTNTKRLTTLILRAIAWAVAMIASAIVLKGNPVKDWVQAALFIGAMTFWVWQSQRASRG*
Ga0150984_1123963111	3300012469	Avena Fatua Rhizosphere	VKRNTGKEQPMRNPSLNTKQLTTLILWALAWAAAMIVSAVLLKGNPIKDWVQAALFIGAMTFWVWQSQKASSK*
Ga0137397_102986122	3300012685	Vadose Zone Soil	MNTSSKKSLTRLVLWAIAWSAVLIGSAILLKGNPLKDWIQAALFIGAMTFWLWQSQRATCN*
Ga0137395_108337341	3300012917	Vadose Zone Soil	MTEARTKLITLVLWAIVWAAALIASAILLKGNPIKDWVQPALFIAAMTFWVWQSQRAARK
Ga0137395_112946451	3300012917	Vadose Zone Soil	MANRSTNTKRLTTLILWAIAWAAAMIASAILLKGNPIKDWVQAALFIGAMTFWVWQSQRAAGR*
Ga0137396_101934082	3300012918	Vadose Zone Soil	VNRNTGKEQPMANPSTNTKRLTTLILWAIAWAAAMMASAILLEGNPIKDWVQAVLFIGAMTFWVWQSQQASSK*
Ga0137394_104762992	3300012922	Vadose Zone Soil	MNTSSKKSLTRLVLWAIAWSAALIGSAILLKGNPLKDWIQAALFIGAMTFWLWQSQRATCN*
Ga0137394_104933071	3300012922	Vadose Zone Soil	TLSLWAIGWAAAMIASAILLKGNPIKDWVQAVLFIGAMTFWVWQSQQASSK*
Ga0137404_105185432	3300012929	Vadose Zone Soil	MANRSTNTKRLTTLILWAMAWAAAMIAAAILLKGNPIKDWVQAALFIGAMTFWVWQSQRAAGRR*
Ga0137410_120249431	3300012944	Vadose Zone Soil	MTASGRQLTTLILWAVAWATAMIASAILLKGNPTKDWVQAALFIAAMSFWVWQSHRAVRR
Ga0164300_105441592	3300012951	Soil	VKRNTGKEQPMTNYSTNSKRLTILILCAVAWAAAMIASAVLLKGNPIKDWVQAALFIGAMTFWVWQSSRNSGK*
Ga0164303_107173841	3300012957	Soil	VKRNTGKEQPMTNSSTNSKRLTILILYAVVWAAAMIASAVLLKGNPIKDWVQAALFIGAMTFWVWQSSRNSGK*
Ga0164299_100421262	3300012958	Soil	VKRNTGKEQPMTNSSTNSKRLTILILRAVAWAAAMIASAVLLKGNPIKDWVQAALFIGAMTFWVWQSSRNSGK*
Ga0164302_114335141	3300012961	Soil	GWSFLGVKRNTGKEQPMTNSSTNSKRLTILILYAVVWAAAMIASAVLLKGNPIKDWVQAALFIGAMTFWVWQSSRNSGK*
Ga0157375_100720222	3300013308	Miscanthus Rhizosphere	MTGPNKNKLGALILWAILWAVAMIGSAIIFKGSAIKDWVQSALFIAAMTFWVWQSQAARQS*
Ga0157375_130748761	3300013308	Miscanthus Rhizosphere	VAASTAKLTTLIGWAIAWAGAMIASAILLKGNPIKDWIQSALFIAAMTFWVWQ
Ga0134078_104563041	3300014157	Grasslands Soil	VNRKIGKEQPMANPSTNTKRLTTLILWAIAWAAAMMASAILLKGNPVKDWVQAALFIGAMTFWVWQSQKASSK*
Ga0134079_100685552	3300014166	Grasslands Soil	MRNPSPNTKRLTTLILWALAWAAAMIVSAVLFKGNPIKDWVQAALFIGAMTFWVWQSQKASSK*
Ga0157380_115919192	3300014326	Switchgrass Rhizosphere	MTTLILWAIAWAVAMIVSAILLKGNPVKDWVQAALFIAAMTFWVWHSYRSACN*
Ga0137409_102670482	3300015245	Vadose Zone Soil	LLTFKESVMTASGRQLTTLILWAVAWATAMIASAILLKGNPTKDWVQAALFIAAMSFWVWQSHRAVRR*
Ga0132258_100122804	3300015371	Arabidopsis Rhizosphere	MTTRDKSLTRLVFWAVAWAVAMIGSAIVLKGNPLKDWIHLALFIAAMTFWLWQSQRVARN
Ga0132258_102214735	3300015371	Arabidopsis Rhizosphere	MTSPSKKPLTTMILWAVAWAVAMIASAILLKGNPVKDWVQSALFIGAMTFWVWQSQRASGK*
Ga0132258_119898922	3300015371	Arabidopsis Rhizosphere	VFKKGTKNYKMTSPSKKPLTILILWAVAWAVAMIASAILLKGNPVKDWVQSALFIGAMTFWVWQSRRTSGK*
Ga0132256_1004055681	3300015372	Arabidopsis Rhizosphere	VFKKGTKNYKMTSPSKKPLTILILWAVAWAVAMIASAILLKGNPVKDWVQSAFFIGAMTFWVWQSRRTSGK*
Ga0132257_1000540625	3300015373	Arabidopsis Rhizosphere	MTSPSKKPLTTMILWAVAWAVAMIASVILLKGNPVKDWVQSALFIGAMTFWVWQSQRASGK*
Ga0066669_103426401	3300018482	Grasslands Soil	MVKRNTAKEQPMANPSTNTKRLTALILWAIAWAVAMIASAILLKGNPIKDWVQAVLFIGAMTFWVWQSTRAEALT
Ga0179594_100495012	3300020170	Vadose Zone Soil	VNRNTGKEQPMAHPSTNTKRLTTLILWAIAWAAAMIASAILLKGNPVKDWVQAALFIGAMTFWVWQSQRASSK
Ga0207645_107885871	3300025907	Miscanthus Rhizosphere	MTQSSPKRMTTLILWAIAWAVAMIGSAILLKGNPVKDWVQAALFIGAMTFWVWQSQRTPG
Ga0207684_103802461	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MATSRKQLTTLIVWAVAWAATMIVSAVLLKGNPIKDWIQSAPFIAAMTFWVLQTQRSSAK
Ga0207684_114137032	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTNTSTNSKQLSTLILWAIAWAAALIASAFLLKGNPIKDWVQAALFIAAMTFWVWQSQRASAG
Ga0207644_100166186	3300025931	Switchgrass Rhizosphere	MTTRDKSLTRLVFWAVAWAVAMIGSAIVLKGNPLKDWIHAALFIAAMTFWLWQSQRVARN
Ga0257171_10044832	3300026377	Soil	MISSSKQSFTTLLLWAIAWSAAMIGSAILLKGNPLKDWIQAALFIGAMTFWLWQSQRAAR
Ga0209388_10057531	3300027655	Vadose Zone Soil	MTEARTKLITLVLWAIVWAAALIASAILLKGNPIKDWVQSALFIAAMTFWVWQSQRAARK
Ga0209283_102640632	3300027875	Vadose Zone Soil	MTEARTKLITLVLWAIVWAAALIASAILLKGNPIKDWVQSALFIAAMTFWVWQ
Ga0137415_101057782	3300028536	Vadose Zone Soil	MANPSTNTKRLTTLILWAIAWAAAMIASAILLKGNPIKDWVQAALFIGAMSFWVWQSTRNSGK
Ga0307408_1002281112	3300031548	Rhizosphere	VAASTAKLTTLIAWAIVWAALMIASAMLLKGNPIKDWIQSALFIAAMTFWVWQSHRTARK
Ga0307405_104496811	3300031731	Rhizosphere	VAASTAKLTTLIAWAIVWAALMIASAILLKGNPIKDWIQSALFIAAMTFWVWQSHRTARR
Ga0307468_1022313012	3300031740	Hardwood Forest Soil	MTSSKPQLITLILWAVVWAAAMIASAILLKGNPIKDWIQSALFIAAMTFWVWQSQRAARK
Ga0307406_103314522	3300031901	Rhizosphere	VAASTAKLTTLIGWAIVWAALMIAAAMLLKGNPIKDWIQSALFIAAMTFWVWQSHRTARK
Ga0307407_108321251	3300031903	Rhizosphere	VAASTAKLTTLIAWAIVWAALMIASAILLKGNPIKDWIQSALFIAAMTFWVW
Ga0307409_1003064502	3300031995	Rhizosphere	VAASTAKLTTLIAWAIVWAALMIASAILLKGNPIKDWIQSALFIAAMTFWVWQSHRTARK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063561

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences