Metagenome / Metatranscriptome Family F063669

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063669
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	93 residues
Representative Sequence	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQAAESKDHELLGQHLTLARDGDLPIRMIVTP
Number of Associated Samples	114
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.12 %
% of genes near scaffold ends (potentially truncated)	97.67 %
% of genes from short scaffolds (< 2000 bps)	97.67 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.372 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.930 % of family members)
Environment Ontology (ENVO)	Unclassified (26.357 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.186 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.69% β-sheet: 12.93% Coil/Unstructured: 66.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00076	RRM_1	13.18
PF13545	HTH_Crp_2	1.55
PF13893	RRM_5	0.78
PF00487	FA_desaturase	0.78
PF00072	Response_reg	0.78
PF00291	PALP	0.78
PF01070	FMN_dh	0.78
PF13561	adh_short_C2	0.78
PF13610	DDE_Tnp_IS240	0.78
PF02133	Transp_cyt_pur	0.78
PF03466	LysR_substrate	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.78
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.78
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.78
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.37 %
Unclassified	root	N/A	11.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.37 %
Unclassified	root	N/A	11.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.37 %
Unclassified	root	N/A	11.63 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	85.27 %
Unclassified	root	N/A	11.63 %

Name	Rank	Taxonomy	Distribution
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	43.41 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	36.43 %
Unclassified	root	N/A	11.63 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	43.41 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	36.43 %
Unclassified	root	N/A	11.63 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	43.41 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	36.43 %
Unclassified	root	N/A	11.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101784580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	603	Open in IMG/M
3300004092\|Ga0062389_102365850	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	702	Open in IMG/M
3300004120\|Ga0058901_1210284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	547	Open in IMG/M
3300004137\|Ga0058883_1383187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	577	Open in IMG/M
3300004631\|Ga0058899_10039393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	537	Open in IMG/M
3300004631\|Ga0058899_11680832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	634	Open in IMG/M
3300004635\|Ga0062388_100182218	All Organisms → cellular organisms → Bacteria → Proteobacteria	1636	Open in IMG/M
3300005178\|Ga0066688_10545801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	745	Open in IMG/M
3300005366\|Ga0070659_101794976	Not Available	549	Open in IMG/M
3300005434\|Ga0070709_10965079	Not Available	677	Open in IMG/M
3300005437\|Ga0070710_10586660	Not Available	774	Open in IMG/M
3300005437\|Ga0070710_11494852	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300005439\|Ga0070711_100466499	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300005526\|Ga0073909_10436814	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	623	Open in IMG/M
3300005529\|Ga0070741_10551612	Not Available	1035	Open in IMG/M
3300005538\|Ga0070731_10257247	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1159	Open in IMG/M
3300005538\|Ga0070731_10661775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	694	Open in IMG/M
3300005546\|Ga0070696_100630897	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	867	Open in IMG/M
3300005561\|Ga0066699_10365906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1031	Open in IMG/M
3300005563\|Ga0068855_102623717	Not Available	500	Open in IMG/M
3300005591\|Ga0070761_10183813	All Organisms → cellular organisms → Bacteria → Proteobacteria	1234	Open in IMG/M
3300005610\|Ga0070763_10511271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	688	Open in IMG/M
3300005712\|Ga0070764_10735111	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	610	Open in IMG/M
3300005842\|Ga0068858_100413250	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1297	Open in IMG/M
3300005842\|Ga0068858_101333585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	706	Open in IMG/M
3300005921\|Ga0070766_11221297	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	520	Open in IMG/M
3300006577\|Ga0074050_10740650	All Organisms → cellular organisms → Bacteria → Proteobacteria	1006	Open in IMG/M
3300009012\|Ga0066710_101934100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	880	Open in IMG/M
3300009093\|Ga0105240_12353008	Not Available	552	Open in IMG/M
3300009093\|Ga0105240_12360779	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	551	Open in IMG/M
3300009551\|Ga0105238_12433709	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	559	Open in IMG/M
3300010048\|Ga0126373_11773298	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	681	Open in IMG/M
3300010371\|Ga0134125_13097422	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	504	Open in IMG/M
3300010860\|Ga0126351_1077071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	658	Open in IMG/M
3300011120\|Ga0150983_14184206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	595	Open in IMG/M
3300011120\|Ga0150983_14613600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	605	Open in IMG/M
3300011120\|Ga0150983_16356562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	527	Open in IMG/M
3300012359\|Ga0137385_10657677	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	877	Open in IMG/M
3300012359\|Ga0137385_11454785	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	549	Open in IMG/M
3300012683\|Ga0137398_10250248	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1180	Open in IMG/M
3300012924\|Ga0137413_10153270	All Organisms → cellular organisms → Bacteria → Proteobacteria	1507	Open in IMG/M
3300012924\|Ga0137413_11817279	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	503	Open in IMG/M
3300012982\|Ga0168317_1015318	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2356	Open in IMG/M
3300013296\|Ga0157374_12100719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	592	Open in IMG/M
3300013307\|Ga0157372_10944723	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300014162\|Ga0181538_10748994	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	504	Open in IMG/M
3300014325\|Ga0163163_11865976	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	661	Open in IMG/M
3300014654\|Ga0181525_10229463	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300015242\|Ga0137412_10915266	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	634	Open in IMG/M
3300017924\|Ga0187820_1243457	Not Available	575	Open in IMG/M
3300017926\|Ga0187807_1261018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	569	Open in IMG/M
3300019242\|Ga0181502_1024616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	517	Open in IMG/M
3300019268\|Ga0181514_1501050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	546	Open in IMG/M
3300021151\|Ga0179584_1206440	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	505	Open in IMG/M
3300021170\|Ga0210400_11364852	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	566	Open in IMG/M
3300021402\|Ga0210385_11258802	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	567	Open in IMG/M
3300021405\|Ga0210387_10405500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1208	Open in IMG/M
3300021420\|Ga0210394_11353251	Not Available	607	Open in IMG/M
3300021432\|Ga0210384_11446932	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	592	Open in IMG/M
3300021433\|Ga0210391_10884824	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	697	Open in IMG/M
3300021433\|Ga0210391_11593101	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	500	Open in IMG/M
3300021445\|Ga0182009_10467399	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	661	Open in IMG/M
3300021477\|Ga0210398_10635447	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	866	Open in IMG/M
3300021559\|Ga0210409_10967636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	725	Open in IMG/M
3300022499\|Ga0242641_1038022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	551	Open in IMG/M
3300022506\|Ga0242648_1066333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	578	Open in IMG/M
3300022511\|Ga0242651_1029168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	613	Open in IMG/M
3300022515\|Ga0224546_1008556	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	761	Open in IMG/M
3300022522\|Ga0242659_1056183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	706	Open in IMG/M
3300022527\|Ga0242664_1119351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	558	Open in IMG/M
3300022528\|Ga0242669_1081380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	601	Open in IMG/M
3300022529\|Ga0242668_1122051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	550	Open in IMG/M
3300022712\|Ga0242653_1104837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	521	Open in IMG/M
3300022713\|Ga0242677_1068975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	552	Open in IMG/M
3300022718\|Ga0242675_1109517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	541	Open in IMG/M
3300022722\|Ga0242657_1165316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	592	Open in IMG/M
3300024249\|Ga0247676_1020791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1037	Open in IMG/M
3300024330\|Ga0137417_1361049	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1470	Open in IMG/M
3300025898\|Ga0207692_10437197	Not Available	821	Open in IMG/M
3300025898\|Ga0207692_11048649	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	539	Open in IMG/M
3300025906\|Ga0207699_10870042	Not Available	664	Open in IMG/M
3300025913\|Ga0207695_10181249	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2027	Open in IMG/M
3300025919\|Ga0207657_11439082	Not Available	516	Open in IMG/M
3300025924\|Ga0207694_10093306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2377	Open in IMG/M
3300025924\|Ga0207694_10151533	All Organisms → cellular organisms → Bacteria → Proteobacteria	1868	Open in IMG/M
3300025944\|Ga0207661_10794178	Not Available	871	Open in IMG/M
3300025944\|Ga0207661_11866783	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	546	Open in IMG/M
3300025949\|Ga0207667_12180559	Not Available	511	Open in IMG/M
3300026078\|Ga0207702_12341288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	522	Open in IMG/M
3300026116\|Ga0207674_11343806	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	684	Open in IMG/M
3300027067\|Ga0208602_1027599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	560	Open in IMG/M
3300027667\|Ga0209009_1100026	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	735	Open in IMG/M
3300027821\|Ga0209811_10161814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	834	Open in IMG/M
3300027855\|Ga0209693_10511741	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	573	Open in IMG/M
3300028379\|Ga0268266_10703577	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	974	Open in IMG/M
3300028573\|Ga0265334_10275034	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	578	Open in IMG/M
3300028747\|Ga0302219_10225273	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	725	Open in IMG/M
3300028808\|Ga0302228_10432494	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	582	Open in IMG/M
3300030503\|Ga0311370_10481193	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1529	Open in IMG/M
3300030521\|Ga0307511_10433744	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	526	Open in IMG/M
3300030730\|Ga0307482_1321983	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	502	Open in IMG/M
3300030738\|Ga0265462_11768726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	591	Open in IMG/M
3300030740\|Ga0265460_12611082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	539	Open in IMG/M
3300030741\|Ga0265459_12004784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	693	Open in IMG/M
3300030743\|Ga0265461_13027579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	564	Open in IMG/M
3300030764\|Ga0265720_1003511	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	840	Open in IMG/M
3300030836\|Ga0265767_116078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	541	Open in IMG/M
3300030845\|Ga0075397_11087186	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	676	Open in IMG/M
3300030885\|Ga0265743_117712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	542	Open in IMG/M
3300030937\|Ga0138302_1177442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	500	Open in IMG/M
3300031057\|Ga0170834_107036454	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1853	Open in IMG/M
3300031231\|Ga0170824_116664017	Not Available	679	Open in IMG/M
3300031234\|Ga0302325_13072721	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	537	Open in IMG/M
3300031708\|Ga0310686_108578487	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	665	Open in IMG/M
3300031718\|Ga0307474_10409647	Not Available	1056	Open in IMG/M
3300031718\|Ga0307474_11454032	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	540	Open in IMG/M
3300031730\|Ga0307516_10888808	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	557	Open in IMG/M
3300031753\|Ga0307477_10487545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	839	Open in IMG/M
3300031817\|Ga0316046_108898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	584	Open in IMG/M
3300031868\|Ga0316038_118310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	514	Open in IMG/M
3300031962\|Ga0307479_10476939	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1231	Open in IMG/M
3300031962\|Ga0307479_11610527	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	604	Open in IMG/M
3300032174\|Ga0307470_10675446	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	784	Open in IMG/M
3300032180\|Ga0307471_102602081	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	641	Open in IMG/M
3300032770\|Ga0335085_10672756	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300032805\|Ga0335078_11402546	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	789	Open in IMG/M
3300032893\|Ga0335069_12587197	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	524	Open in IMG/M
3300032895\|Ga0335074_10460884	All Organisms → cellular organisms → Bacteria → Proteobacteria	1341	Open in IMG/M
3300032896\|Ga0335075_11185316	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	664	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.72%
Host-Associated	Host-Associated	16.28%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.52%
Plants	Host-Associated → Plants	16.28%
Aquatic	Environmental → Aquatic	6.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.30%
Freshwater	Environmental → Aquatic → Freshwater	6.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.65%
Peat	Environmental → Terrestrial → Peat	3.88%
Roots	Host-Associated → Plants → Roots	2.33%
Geologic	Environmental → Terrestrial → Geologic	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.39%
Loam	Environmental → Terrestrial → Soil → Loam	18.60%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.10%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.88%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.55%
Mine	Environmental → Terrestrial → Geologic → Mine	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.20%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.10%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.55%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.20%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.65%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.10%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.55%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.55%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.55%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.78%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004137	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012982	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300019242	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022511	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022515	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 1-5	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027067	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF007 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030764	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030836	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030845	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030885	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031817	Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLU5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031868	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLA1 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1017845802	3300000364	Soil	MNLSLSDAFAKFGAKPSNRVRGLSAMAADGALVLNCSLAYFGHPSRGVLRYEDRLSRQSPGCSDTELLGRHLTLAHAGALPVRMVVSSRTNESNG
Ga0062389_1023658501	3300004092	Bog Forest Soil	MNLTLTDAFGRFGAKPSSRLHGRSAIATDGAMVLNCSSVFFGHPARGILRYEDRLSRQPAASKDVGLLSQHLALARDGALPIRMIVTAAAGEKTS
Ga0058901_12102841	3300004120	Forest Soil	MRVSNAGVGWRLLRENGMTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPSRGVLRYEDRLSRQPTESKDHELLGQHLTLAREGDLPIRMI
Ga0058883_13831872	3300004137	Forest Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQASESKDHELLGQHLTLARDGDLPIRMVVTPLPAEKGGGGSRGE
Ga0058899_100393932	3300004631	Forest Soil	MTLSLVDAFRTFGAKPSNRMRGLSAIAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQAAESKDHELLGQHLTLARDGDLPIRMIVTP
Ga0058899_116808322	3300004631	Forest Soil	MTLSLVDAFRTFGAKPSNRMRGLSAIAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQAAESKDHELLGQHLTLARDGDLPIRMIVTPLPAEK
Ga0062388_1001822184	3300004635	Bog Forest Soil	MNLSLTDAFGRFGAKPSSRLHGRSAIATDGAMVLNCLSVHFGHPTRGVLRYEDRLSREPAGSKDVGLLGQHLALARDGELPIRMIVTAK
Ga0066688_105458012	3300005178	Soil	MNLSLIDAFGRFGAKPSNRLRGRSAMAGDGAMVLNCTHAYFGHPSRGVLRYEDKLSREAADSKDAQLLGQHLALARDGALPVRMVVTSLADEK
Ga0070659_1017949762	3300005366	Corn Rhizosphere	MNLTLLSAFARFGAKPHNRHRGLSAIATDGAMVLNCWHAYFGNPERGVLRYEDRLSREPSQSKHMGLLGEHLALARDGELPVRMVVTTQADGKIRGF
Ga0070709_109650792	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MHLSLVDAFGKFGAKPRNRVYSLSAMAADGAMVLNCSKANFGHPSPGILRYEDKLSREPADSKKASDLGQHLTLVRDGALPVRMVVTSIAGDE
Ga0070710_105866601	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MNLNLVDAFGRFGATPSNRVRGLSAIATDGAVVLNCSQQHFAHPSRGVLRYEDSLSREAQDSKDAVLLGQHLTLARDGALPVRMIVAFSSDLK
Ga0070710_114948522	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MNLTLFGAFTRFGAKPLNRHRGLSAIAADGAMVLNCWHTYFGNPERGVLRYEDRLSREPSQSKHVGLLGQHLALARDGELPVRMVVTTQSDGKVRGFHVRPDL
Ga0070711_1004664991	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNLNLVDAFGRFGATPSNRVRGLSAIATDGAVVLNCSQQHFAHPSRGVLRYEDSLSREAQDSKDVVLLGQHLTLARD
Ga0073909_104368142	3300005526	Surface Soil	MHDTNLSLADAFGKFGAKPASRLRGLSAIAADGAVVLNCSPPYFGHPAKGVLRYEDRLSRDPEPPKDAGLLSQ
Ga0070741_105516121	3300005529	Surface Soil	MNLTLVDAFTRFGAKPLNRQRGLSAMAADGAMVLNCSQSYFGHLERGVLRYEDRLSREPVESKEIGRLSEHLAL
Ga0070731_102572473	3300005538	Surface Soil	MNLNLIEAFGRFGAKPHARPGSTSAMAADGALVLACSHRFFGHPAVGVLRYEDRLSREDAGARDTAVLAKHLTLARDSALPVRMVVVTSTDQHNSR
Ga0070731_106617751	3300005538	Surface Soil	MNLSLIDAFGKFGAKPGSRLRALSAIAADGAMVLNCEQAFFRHPERGVLRYENRLPTEPPASKEVELLRQHLTLARDGALPVRMVVTFFTDQ
Ga0070696_1006308971	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MHDTNLSLADAFGKFGAKPASRMRGLSAIATDGAMVLNCSPPYFGHPAKGVLRYEDRLSRDSEQTKDAGLLSQHLALARDGELPVRLI
Ga0066699_103659062	3300005561	Soil	MNLSLIDAFGRFGAKPSNRLRGRSAMAGDGAMVLNCTHAYFGHPSRGVLRYEDKLSREAADSKDAQLLGQHLALARDGALPVRMVV
Ga0068855_1026237172	3300005563	Corn Rhizosphere	MNLTLLSAFARFGAKPHNRHRGLSAIATDGAMELNCWHAYFGNPERGVLRYEDRLSREPSQSKHMGLLGEHLALARDGELPVRMVVTTQADGKIRGF
Ga0070761_101838131	3300005591	Soil	MSLLSLIDAFGKFGAKPNNRLLGLSAMAADGAVVLNCSHAHFGHPAPGVLRYEDKLSRESASSKDSDLLSQHLTLARDGALPVRMVVAAQADKHH
Ga0070763_105112712	3300005610	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQATESKDHELLSQHLTLARDGDLPIRMIV
Ga0070764_107351112	3300005712	Soil	MNLTLTDAFQRFGAKPSSRLHGRSAIATDGAMVLNCSTVYFGHPARGVLRYEDRLSRQPATSKDVGLLGQHLAL
Ga0068858_1004132503	3300005842	Switchgrass Rhizosphere	MNLSLVDAFGRFGAKPARRLQALSAMAADGALVLNCSGAYFVHPSQGVLRYEDRLSREPGGAKDTGLLGQHLTIAHEGALPVRMIVTSRTDEKRGTRTCHVRPDLI
Ga0068858_1013335853	3300005842	Switchgrass Rhizosphere	MNLSLVDAFGKFGAKPGNRVHSLSAMAVDGALVLNCSKSYFAHPSRGVLRYEDRLSREPADSKQSELLSQHLTLARDGALPVRMVVTSIAG
Ga0070766_112212971	3300005921	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQATESKDHELLSQHLTLARDGDLPIRMIVTPLPAEKSGGGSRGGFRVRPD
Ga0074050_107406501	3300006577	Soil	MHDTNLSLADAFGKFGAKPATRMRGLSAIAADGAMVLNCSPPYFGHPAKGVLRYEDRLSRDSDDTKNAGLLGQHLALARDGELPVRMIVKTPTDAGSNRQ
Ga0066710_1019341003	3300009012	Grasslands Soil	MNLSLIDAFGRFGAKPSNRIRGRSAMAGDGAMVLNCTHAYFGHPSRGVLRYEDKLSREAADSKDAQLLGQHLALARDGALPVRMVVTSLADEKSGTGSRSFHVRPDL
Ga0105240_123530081	3300009093	Corn Rhizosphere	MNLTLLDAFTRFGAKPLNRHQGLSAMASDGAMVLNCSHAYFGNPERGVLRYEDRLSREPAESKEIGRLGEHLALACAGALPVRMVVTTQGDGKGRGF
Ga0105240_123607791	3300009093	Corn Rhizosphere	MNLSLFDAFGRFGARPTNRVRALSAIAADGAVVLNCANSCFGHPSRGVLRYEDTLSRENGESKDAQLLRQHLELARDGTLPVRMIVMSLTVAGGGKSVRA
Ga0105238_124337091	3300009551	Corn Rhizosphere	MDLSLVDAFGKFGAKPRNRVYSLSAMATDGAMVLNCSKAYFGHPSPGILRYEDRLSREPADSKGGADLGQHLTLARDGGLPVRMVVTSIAGDDRGRRSFHI
Ga0126373_117732982	3300010048	Tropical Forest Soil	MNLSLIDAFGRFGAKPANRLRARSAMAADGSMVLNCFPPHFGHPRPGVLRYEDRLSREPADSNDSDLLGQHLTQARDGVLLVRMIVSVVTDDKRGGRRCH
Ga0134125_130974221	3300010371	Terrestrial Soil	MNLSLVDAFGRFGAKPASRLRALSAMAADGALVLNCSGAYFGHPSQGVLRYEDRLSREPGGPKDTGLLSQHLTVARDGAMPVRMIVTSRTDEKGGTRARTCH
Ga0126351_10770711	3300010860	Boreal Forest Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPSRGVLRYEDRLSRQPTESKDHELLGQHLTLARDGDLPIRMIVTPLPAEKSGGGSRGGFRVRPD
Ga0150983_141842062	3300011120	Forest Soil	MNLSLVDAFARFGAKPRNRLRALSAIAADGAMVLNCSHAYFGHPSQGVLRYEDKLSRDTAPTKETGLLGEHLALARDSELPVRMIVTPTIEEKSRK
Ga0150983_146136001	3300011120	Forest Soil	MTLSLVDAFRTFGAKPSNRMRGLSAIAADGAMVLNCSQACFGHPSRGVLRYEDRLSRQAAESKDHELLGQHLTLARDGALPIRMIVTPSPAEKSGGGSRGGFRVRPDLT
Ga0150983_163565621	3300011120	Forest Soil	MRVSNAGVGWRLLRENGMTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPSRGVLRYEDRLSRQPTESKDHELLGQHLTLA
Ga0137385_106576772	3300012359	Vadose Zone Soil	MNLSLTDAFSRFGAKPSNRLRGLSAMATDGAMVLNCSSVHFGHPAPGVLRYEDRLSREPAGAKVTGLLGQHLTLARDGALPIRMIVTAVAGETT
Ga0137385_114547851	3300012359	Vadose Zone Soil	MTLSLVDAFRTFGAKPSNRMRGLSAIATDGSMVLNCSQTCFGHPARGVLRYEDRLSRQAVESKGNELLGQHLTLARDGDLPIRMIVTPLPAEKSG
Ga0137398_102502481	3300012683	Vadose Zone Soil	MNLSLVDAFRAFGAKPNSRLRCASAMAEDGAMVLNCSYAHFGHPARGVLRYEDRLSRETANPDDSRRLSEHLTLARDGELPIRMVVTSRVEENATGPRSFYVR
Ga0137413_101532701	3300012924	Vadose Zone Soil	MNLSLTDAFGRFGAKPSNRLRGLSAMATDGAMVLNCSSVHFGHPAPGVLRYEDRLSREPAGAKVTGLLGQHLTLARDGALPIRMIVTAVAGETTGSRCHVRPDL
Ga0137413_118172791	3300012924	Vadose Zone Soil	MNLSLVDAFGKFGAKPTNRLRALSAMAADGAMVLNCAQPQFGHPAKGVLRYEDKLSRESPDSKLTELLGQHLALARDGELPIRMIVT
Ga0168317_10153181	3300012982	Weathered Mine Tailings	MHLSLVDAFGRFGSKPSNRIRSLSAIAADGAMVLNCSPAYFGHPAQGVLRYEDRLSREVPITRCGELLSQHLTLARDAALPVRMIVR
Ga0157374_121007192	3300013296	Miscanthus Rhizosphere	MNLTLIDAFGRFGATPSSRLRSLSAMAADGAMVLNCSQQYFAHPSRGVLRYEDRLSREPEEPKDLALLGQHLTLARDGALPVRMVVAL
Ga0157372_109447231	3300013307	Corn Rhizosphere	MNLNLIDAFARFGATPSNRIRGLSAIATDGAVVLNCSQQHFAHPTRGVLRYEDRLSREPQDSKDVALLGQHLTLARDS
Ga0181538_107489941	3300014162	Bog	LNLAGAFESFGAQPTNRLRGLSAIAADGALVLNCSHDYFGHPTRGVLRYEDKLSREPNQPKEVTLLGQHLSLARDGTLPV
Ga0163163_118659762	3300014325	Switchgrass Rhizosphere	MNLSLIDAFSKFGAQPTNRLRGLSALAADGALVLNCQQPYFGHPSRGVLRYEDRLSRESAESKDAQLLGQHLTLARDGALPVRMVVTSLEEKGGKSSRRCH
Ga0181525_102294632	3300014654	Bog	MTRLARRNPNCMNLSLTDAFSRFGAKPSNRLRGLSAMATDGAMVLNCSSVHFGHPSPGVLRYEDRLSREPAGAKVTGLLGQH
Ga0137412_109152661	3300015242	Vadose Zone Soil	MNMSLVEAFGKFGSKPSNRVRALSAMAADGAMVLNCSHAYFGHPAQGVLRYEDRLSREATVTKCTDLLSQHLTLARDGALPVRMVVMSVVVDEKRTSRTFHV*
Ga0187820_12434571	3300017924	Freshwater Sediment	MNLSLRDAFARFGAKPSNRLRGLSAMAADGALVLNCSVAHFRHHSRGVLRYEDRLSRQSAGSGDSELLGQHLTLARS
Ga0187807_12610181	3300017926	Freshwater Sediment	MNLSLRDAFARFGAKPSNRLRGLSAMAADGALVLNCSHAHFRHPSRGVLRYEDRLSRQSPGSSDTELLGRHLTLARAGALPVRMVVSSRADDDSAGGS
Ga0181502_10246161	3300019242	Peatland	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPSKGVLRYEDRLSRQATESKDHELLGQHLTLARDGDLPV
Ga0181514_15010501	3300019268	Peatland	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGSMVLNCSQACFGHPCRGVLRYEDRLSRQAAESKDHELLGQHLTLARDGDLPIRMIVTPLPAEKSGGGSRGG
Ga0179584_12064401	3300021151	Vadose Zone Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPSRGVLRYEDRLSRQPTESKDHELLEQHLTLARDGDLPIRMIVTPLPAEKSGGGSRG
Ga0210400_113648522	3300021170	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAIATDGSMVLNCSQTCFGHPARGVLRYEDRLSRQAAESKDNELLGQHLTLARDGDLPIRMIVTPLPAEKSGGGSRGGFR
Ga0210385_112588021	3300021402	Soil	MNLSLRDAFARFGAKPSNRLRGLSAMATDGALVLNCSQTQFGHPSRGVLRYEDRLSRQSTAAHDTELLGQHLTLAHAGALPVRMVVTSSASD
Ga0210387_104055003	3300021405	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQATESKDHELLSQHLTLARDG
Ga0210394_113532511	3300021420	Soil	MNLSLSDAFARFGAKPSNRLRGLSAMATDGAMVLNCSKEQFAHPSRGVLRYEDKLSRQPTTARDTELLGRHLTLARDGALPVRMVVCSQADNKSGG
Ga0210384_114469322	3300021432	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAIATDGSMVLNCSQTCFGHPARGVLRYEDRLSRQAAESKDNELLGQHLTLARDGDLP
Ga0210391_108848241	3300021433	Soil	VNLNLTDAFGRFGARPSNRLSGLSAIAPDGAIVLNCRHAYFGHPSRGVLRYEDRLSRESAESKDNQLLGQHLTLARDGSLPIRMVVMSVADEKTSRSFHVRPDLIGKV
Ga0210391_115931011	3300021433	Soil	MNLTLTDAFQRFGAKPSSRLHGRSAIATDGAMVLNCSTVYFGHPARGVLRYEDRLSRQPATSKDVGLLGQHLALARDGALPIRLIVTAAAGEKTSSSCHVRPD
Ga0182009_104673992	3300021445	Soil	MGMSLVEAFARFGSKPSNRLRGLSGMAADGALVLNCSPQYFGHPERGVLRYEDRLSREVIGSKCTDLLGQHLTLARDGALPVRMVVRPADSGGRSSLG
Ga0210398_106354472	3300021477	Soil	MNLSLTDAFGRFGAKPSSRLHGRSAIATDGAMVLNCLSVHFGHPTRGVLRYEDRLSREPAGSKDVGLLGQHLALARDGELPIRMIVTAKAGEKTSSSCHVRP
Ga0210409_109676362	3300021559	Soil	MNLSLSDAFARFGAKPSSRQRGLSAIAADGALVLNCSQAHFGHPSRGVLRYEDRLSGEAAGSRDTELLGRHL
Ga0242641_10380222	3300022499	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQATESKDHELLGQHLTLARDGDLPIRMIVTPLPAEKSGGGS
Ga0242648_10663331	3300022506	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAIAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQAAESKDHELLGQHLTLARDGDLPIRMVVTPLPAEKSGGGSRGGFR
Ga0242651_10291681	3300022511	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAIATDGSMVLNCSQTCFGHPARGVLRYEDRLSRQAVESKDNELLGQHLTLARDGD
Ga0224546_10085561	3300022515	Soil	MNLSLRDAFARFGAKPSNRLRGLSAMATDGALVLNCSQAYFGHPSRGVLRYEDRLSRQTSGNGETELLGRHLTLACADALPVRMVVSFRADEKNASGSPGC
Ga0242659_10561831	3300022522	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQAAESKDHELLGQHLTLARDGDLPIRMIVTPLPAEKSGGGSRGGFRVR
Ga0242664_11193511	3300022527	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQAAESKDHELLGQHLTLARDGDL
Ga0242669_10813802	3300022528	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQAAESKDHELLGQHLTLAR
Ga0242668_11220511	3300022529	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAIAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQAAESKDHELLGQHLTLARDGDLPIRMVVTPLPAEK
Ga0242653_11048371	3300022712	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQAAESKDHELLGQHLTLARDGDLPIRMIVTPL
Ga0242677_10689751	3300022713	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQAAESKDHELLGQHLTLARDGDLPIRMIVTPLPAEK
Ga0242675_11095172	3300022718	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQAAESKDHELLGQHLTLARDGDLPIRMIVTPLPAEKS
Ga0242657_11653161	3300022722	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQAAESKDHELLGQHLTLARDGDLPIRMIVTPLPAEKSGGGSRGGFRVRPD
Ga0247676_10207911	3300024249	Soil	MNLTLRDAFARFGAKLGNRLRGFSAMAADGALVLNCSHAHFGHPSRGVLRYEDRLSRLGSADTKLLGQHLTLAHAGALPVRMVVSSRAAEKNGGG
Ga0137417_13610492	3300024330	Vadose Zone Soil	MNLSLVDAFGKFGAKPTNRLRALSAMANDGAMVLNCAQPQFGHPAKGVLRYEDKLSRESPDSKLTELLGQHLALARDGNCRSG
Ga0207692_104371971	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MNLNLVDAFGRFGATPSNRVRGLSAIATDGAVVLNCSQQHFAHPSRGVLRYEDSLSREAQDSKDAVLLGQHLTLARDGALPVRMIVAFSSDLKRGTS
Ga0207692_110486491	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MNLSLSDAFARFGAKPSNRLRGLSAMATDGAMVLNCSKEQFGHPSRGVLRYEDKLSRQSTTTRDTELLGQHLT
Ga0207699_108700421	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MNLTLSDAFARFGAKTGNRHGALSAIAADGAVVLNCEQACFRHPERGVLRYENRVSTDPLALKDAQLLGQHLALARDGALPVRMVVTFLIDGES
Ga0207695_101812494	3300025913	Corn Rhizosphere	MHLSLVDAFGRFGSKPTNRIHSLSAIAADGAMVLNCSPGYFGHPAQGVLRYEDRLSREVPVTRCAELLSQHLALARDDALPVRMIV
Ga0207657_114390821	3300025919	Corn Rhizosphere	VNLSLIDAFGSFGAKPGNRQRALSAIAADGALVLNCEQTHFQHPERGVLRYEDRLSRESVDAKDAELLRQHLTLARDGELPVRM
Ga0207694_100933065	3300025924	Corn Rhizosphere	MNLTLIDAFGRSGAKPGNKHGALSAIAADGAMVLNGEQACFRHPERGVLRYENRVSTDPLALKDAQLLGQHLALARDGALPV
Ga0207694_101515331	3300025924	Corn Rhizosphere	MHLSLVEAFGRFGSKPSNRIHSLSAIAADGAMVLSCSPAYFGHPAQGVLRYEDRLSREVPSTRCAELLGQHLTLARDAALPVRMVVTSVGSEKK
Ga0207661_107941781	3300025944	Corn Rhizosphere	MNLTLLSAFARFGAKPHNRHRGLSAIATDGAMVLNCWHAYFGNPERGVLRYEDRLSREPSQSKHMGLLGEHLALARDGELPVRMVVTTQADGKIRGFHVRPDLI
Ga0207661_118667831	3300025944	Corn Rhizosphere	MDLSLIDAFGKFGAIPRNRVYSLSAIAADGAMVLNCSKAYFGHPSPGILRYEDRLSREPADSKEGAYLGQHLTLARDGELPVRMIVMSIANDG
Ga0207667_121805592	3300025949	Corn Rhizosphere	MNLTLLSAFARFGAKPHNRHRGLSAIATDGAMELNCWHAYFGNPERGVLRYEDRLSREPSQSKHMGLLGEHLALARDGERIFWTTRKGMVFD
Ga0207702_123412881	3300026078	Corn Rhizosphere	MNLNLIDAFARFGATPGNRIRGLSAIAADGAVVLNCSQQHFAHPTRGVLRYEDRLSREPQDSKDVALLGQHLTLARDSDLPVRMVV
Ga0207674_113438062	3300026116	Corn Rhizosphere	MNLSLVDAFGRFGAKPHNRLHSLSAMAADGAMVLNCSKAHFGHPSPGVLRYEDRLSRDPADSKKGAYLGQHLTLARDGALPVRMVVTSIAG
Ga0208602_10275992	3300027067	Forest Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQATESKDHELLSQHLTLARDGDLPIRMIVTPLPAEKS
Ga0209009_11000261	3300027667	Forest Soil	MHLNLVGAFESFGARPSNRLRGLSAIAADGALVLNCSSPYFGHPSRGVLRYEDKLSREATRPKDMTLLGQHLSLARDGTLPVRL
Ga0209811_101618141	3300027821	Surface Soil	MNLTLRDAFARFGAKLGNRLRGFSAMAADGALVLNCSHAHFGHPSRGVLRYEGRLSRLGSADTKLLGQHLTLAHAGALPVRMVVSSRAVEKNGGGS
Ga0209693_105117412	3300027855	Soil	MSLLSLIDAFGKFGAKPNNRLLGLSAMAADGAVVLNCSHAHFGHPAPGVLRYEDKLSRESASSKDSDLLSQHLTLARDGALPVRMVVAAQADKHHPGGP
Ga0268266_107035772	3300028379	Switchgrass Rhizosphere	MNLSLVDAFGRFGAKPASRLQALSALAADGALVLNCSGAHFGHPSQGVLRYEDRLSREPAGPKDTGLLGQHLAIARDGALPVRMIVTSRTND
Ga0265334_102750341	3300028573	Rhizosphere	MNLSLVDAFGRFGAKPASRLRALSAMTADGALVLNCSRAYFGNPSQGVLRYEDRLSRQPGGPKNTGLLGQHLTIARDDASPVRMIVTSRTDE
Ga0302219_102252731	3300028747	Palsa	MNLSLIEAFGKFGAKPRSRVGTFSATAPDGALVLNCSLAHFGHPAQGVLRYEDRLSRETAHTKKDIELLGEDLTLARDGALPIRMVVASAMSGKRGGRGFHVRWDLIGKL
Ga0302228_104324941	3300028808	Palsa	MNLSLIEAFGKFGAKPRSRVGTFSATAPDGALVLNCSLAHFGHPAQGVLRYEDRLSRETAHTKKDIELLGEDLTLARDGALPIRMVVASAMSGKRGGRGFHVRWDLI
Ga0311370_104811933	3300030503	Palsa	MNLSLIEAFGKFGAKPRSRVGTFSATAPDGALVLNCSLAHFGHPAQGVLRYEDRLSRETAHTKKDIELLGEDLTLARDGALPIRMVVASAMSGKRGGR
Ga0307511_104337442	3300030521	Ectomycorrhiza	MTLSLVDAFRTFGAKPSNRMRGLSAIATDGSMVLNCSQTCFGHPARGVLRYEDRLSRQAVESKDNELLGQHLTLA
Ga0307482_13219831	3300030730	Hardwood Forest Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQAAESKDHELLGQHLTLARDGDLPIRMIVTPLPAEKSGGGSRGGFRVRPDL
Ga0265462_117687261	3300030738	Soil	MNLSLVDAFARFGAKPSNRLSGLSAIATDGAMVLNCSRAYFGHPSQGVLRYEFRLSGGPPTSKDVGLLGQHLALARDGELPVRMVVMSVV
Ga0265460_126110821	3300030740	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPCRGVLRYEDRLSRLATESKDHELLGQHLTLARDGDLPIRMIVTPLP
Ga0265459_120047842	3300030741	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQAAESKDHELLGQHLTLARDGDLPIRMIVTPLPAEKSGGGSRGGFRVRPDLTGKESSTK
Ga0265461_130275791	3300030743	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQATESKDYELLGQHLTLARDGDLPIRMIVTPSPAEKTGG
Ga0265720_10035112	3300030764	Soil	MNLSLIDAFSRFGAKPSSRLRGLSAIATDGALVLNCSSVHFGHPAPGVLRYEDRLSREPAGAKVTGLLGEHLALARDGALPIRMIVTAAAQTTGGRCHVR
Ga0265767_1160781	3300030836	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQAAESKDHELLGQHLTLARDGDLPIRMIVTP
Ga0075397_110871861	3300030845	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAIATDGSMVLNCSQTCFGHPARGVLRYEDRLSRQAVESKDNELLGQHLTLARDGDLPIRMI
Ga0265743_1177121	3300030885	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQAAESKDHELLGQHLTLARDGDLPIRMIVTPLPAEKSGG
Ga0138302_11774422	3300030937	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAMAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQASESKDHELLGQHLTLARDG
Ga0170834_1070364543	3300031057	Forest Soil	MTLSLVDAFRTFGAKPSNRMRGLSAIATDGSMVLNCSQACFGHPARGVLRYEDRLSRQAVESKDNELLGQHLTLARDGDLPIRMIVTPLPAEKSGGGSRGGFRVRPD
Ga0170824_1166640171	3300031231	Forest Soil	MGSSLPRVAIARQRGSWSGMNLSLSDAFARFGAKPSNRLRGLSAMATDGAMVLNCSKEQFAHPSRGVLRYEDKLSRQPTTARDTELLGRHLTLARDGALPV
Ga0302325_130727211	3300031234	Palsa	MNLTLTDAFGRFGAKPSSRLHGRSAIATDGAMVLNCSSVFFGHPARGVLRYEDRLSRQPAASKDVGLLSQHLALARDGALPIRMI
Ga0310686_1085784871	3300031708	Soil	MNLTLTDAFGRFGAKPSSRLHGRSAIATDGAMVLNCSSVFFGHPARGVLRYEDRLSRQPAASKDVGLLSQHLALARDGALPI
Ga0307474_104096472	3300031718	Hardwood Forest Soil	MHLSLIEAFGKFGSKPTDRLRALSAMAADGAMVLNCSAAYFGHPEQGVLRYEDRLSREAATTKRAELLSQHLALA
Ga0307474_114540321	3300031718	Hardwood Forest Soil	MNLSLIDAFAKFGAKPGNRVRGLSAMAADGALVLNCSKAHFGHPSQGVLRYEDRLSREPADTRESALLNQHLTLARDGALPVRMIVTSIAAGERGTRSFHVRSDL
Ga0307516_108888083	3300031730	Ectomycorrhiza	MNLSLVDAFAKFGAKPTNRQRARSAIAADGAMVLNCLHGYFGHPAQGVLRYEDRLSRDSTDVNGTGLLSKHLTLARDGALPVRMV
Ga0307477_104875453	3300031753	Hardwood Forest Soil	MNLSLIDAFRAFGAQPSNRVRGVSAIAADGSMVLNCLQAYFGHPCRGVLRYEDRLSRESADSTDNKLLAQHLALARDGALPIRMVVTSLPNEKRGPGGGRCFH
Ga0316046_1088982	3300031817	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAIAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQATESKDHELLGQHLTLARDGALPIRMIVTPLPAEKSGGGSRGGFRVRPDLT
Ga0316038_1183101	3300031868	Soil	MTLSLVDAFRTFGAKPSNRMRGLSAIAADGAMVLNCSQACFGHPCRGVLRYEDRLSRQATESKDHELLGQHLTLARDGALPI
Ga0307479_104769391	3300031962	Hardwood Forest Soil	MNLTLVDAFGKFGAKPVNRLRGLSAIAADGAMVLNCSKAYFGHPTRGVLRYEDRLSREPAQSRETELLGQHLTLARDGALPIRMVV
Ga0307479_116105271	3300031962	Hardwood Forest Soil	MNLSLVEAFGKFGSKPLNRLHALSAMAADGAMVLNCSPAYFGHPAQGVLRYEDRLSREAAGAKNTELLGQHLTLARDAELPVRMIVTSVVTEKKRSVSCHVRSDL
Ga0307470_106754461	3300032174	Hardwood Forest Soil	MHDTNLSLADAFGKFGAKPASRMRGLSAIATDGAMVLNCSPPYFGHPAKGVLRYEDRLSRDSEQTKDAGLLSQHLALARDGELPVRLIVKTPMDVGSN
Ga0307471_1026020811	3300032180	Hardwood Forest Soil	MHDTNLSLVEAFSKFGAKPATRMRGLSAIAADGAMVLNCAPPYFGHPAKGVLRYEDRLSRTPSDVKDAELLSQHLTLARDGELPVRMIVKTPLDDGSNKHGR
Ga0335085_106727561	3300032770	Soil	MNLSLVDAFGKFGAKPRNRVYSLSAMATDGAMVLNCSKAQFGHPAPGVLRYEDKLSREPATSKEGAYLGEHLALARDGAL
Ga0335078_114025461	3300032805	Soil	MNLSLSDAFARFGAKPSNRLRGLSAMATDGALVLNCSQEHFGHPSRGVLRYEDKLSRQSTTPRDTEQLGRHLTLARDGALPVRMV
Ga0335069_125871972	3300032893	Soil	MHLSLVDAFGKFGSKPSNRLRGLSAIAADGAMVLNCSPAYFVHPEQGVLRYEDRLSREVPGTKCTELLGKHLTLARDGALPVRMVVTSISIV
Ga0335074_104608841	3300032895	Soil	MNLSLADAFGKFGAKPYNRLRGLSAVAADGAVVLNCSPALFGHPSKGVLRYEDKLSREAVGSRDTDLLAQHLALARDGALPIRMVITA
Ga0335075_111853161	3300032896	Soil	MNLSLADAFGKFGAKPYNRLRGLSAVAADGAVVLNCSPALFGHPSKGVLRYEDKLSREAVGSRDTDLLAQHLALARDGALPIRMVITAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063669

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences