Metagenome / Metatranscriptome Family F063671

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063671
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	54 residues
Representative Sequence	MTASTTTHTWMTRVARRISASSGLPLAPPKAAPCVLDLLGHARPQAHAAMKAVI
Number of Associated Samples	105
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.00 %
% of genes near scaffold ends (potentially truncated)	11.63 %
% of genes from short scaffolds (< 2000 bps)	55.04 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.597 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.302 % of family members)
Environment Ontology (ENVO)	Unclassified (39.535 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.186 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.88% β-sheet: 0.00% Coil/Unstructured: 95.12%
Feature Viewer

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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF02355	SecD_SecF	5.43
PF00115	COX1	4.65
PF01368	DHH	3.10
PF00276	Ribosomal_L23	3.10
PF00237	Ribosomal_L22	3.10
PF00203	Ribosomal_S19	2.33
PF00437	T2SSE	2.33
PF00177	Ribosomal_S7	1.55
PF03947	Ribosomal_L2_C	1.55
PF00338	Ribosomal_S10	1.55
PF08669	GCV_T_C	1.55
PF00378	ECH_1	1.55
PF00467	KOW	1.55
PF14378	PAP2_3	1.55
PF00534	Glycos_transf_1	1.55
PF00410	Ribosomal_S8	1.55
PF07650	KH_2	1.55
PF00334	NDK	0.78
PF00676	E1_dh	0.78
PF00471	Ribosomal_L33	0.78
PF17136	ribosomal_L24	0.78
PF08442	ATP-grasp_2	0.78
PF02527	GidB	0.78
PF01566	Nramp	0.78
PF00238	Ribosomal_L14	0.78
PF13541	ChlI	0.78
PF12437	GSIII_N	0.78
PF13304	AAA_21	0.78
PF02357	NusG	0.78
PF10017	Methyltransf_33	0.78
PF00121	TIM	0.78
PF13442	Cytochrome_CBB3	0.78
PF00425	Chorismate_bind	0.78
PF00795	CN_hydrolase	0.78
PF04122	CW_binding_2	0.78
PF14907	NTP_transf_5	0.78
PF04007	DUF354	0.78
PF01416	PseudoU_synth_1	0.78
PF07733	DNA_pol3_alpha	0.78
PF00416	Ribosomal_S13	0.78
PF00297	Ribosomal_L3	0.78
PF05496	RuvB_N	0.78
PF02978	SRP_SPB	0.78
PF01174	SNO	0.78
PF04371	PAD_porph	0.78
PF13229	Beta_helix	0.78
PF00132	Hexapep	0.78
PF06772	LtrA	0.78
PF07549	Sec_GG	0.78
PF01039	Carboxyl_trans	0.78
PF07885	Ion_trans_2	0.78
PF00347	Ribosomal_L6	0.78
PF00825	Ribonuclease_P	0.78
PF05193	Peptidase_M16_C	0.78
PF01436	NHL	0.78
PF00108	Thiolase_N	0.78
PF01569	PAP2	0.78
PF00107	ADH_zinc_N	0.78
PF11790	Glyco_hydro_cc	0.78
PF00137	ATP-synt_C	0.78
PF00886	Ribosomal_S16	0.78
PF01795	Methyltransf_5	0.78
PF03668	ATP_bind_2	0.78
PF02272	DHHA1	0.78
PF02629	CoA_binding	0.78
PF01872	RibD_C	0.78
PF01266	DAO	0.78
PF13328	HD_4	0.78
PF02567	PhzC-PhzF	0.78
PF00333	Ribosomal_S5	0.78
PF00571	CBS	0.78
PF13302	Acetyltransf_3	0.78
PF00252	Ribosomal_L16	0.78
PF02782	FGGY_C	0.78
PF06415	iPGM_N	0.78
PF01479	S4	0.78
PF03030	H_PPase	0.78
PF01914	MarC	0.78
PF09594	GT87	0.78
PF12697	Abhydrolase_6	0.78
PF02569	Pantoate_ligase	0.78
PF00773	RNB	0.78
PF00673	Ribosomal_L5_C	0.78
PF00687	Ribosomal_L1	0.78
PF00583	Acetyltransf_1	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0341	Preprotein translocase subunit SecF	Intracellular trafficking, secretion, and vesicular transport [U]	6.20
COG0342	Preprotein translocase subunit SecD	Intracellular trafficking, secretion, and vesicular transport [U]	6.20
COG0089	Ribosomal protein L23	Translation, ribosomal structure and biogenesis [J]	3.10
COG0091	Ribosomal protein L22	Translation, ribosomal structure and biogenesis [J]	3.10
COG0185	Ribosomal protein S19	Translation, ribosomal structure and biogenesis [J]	2.33
COG0458	Carbamoylphosphate synthase large subunit	Amino acid transport and metabolism [E]	1.55
COG0049	Ribosomal protein S7	Translation, ribosomal structure and biogenesis [J]	1.55
COG0051	Ribosomal protein S10	Translation, ribosomal structure and biogenesis [J]	1.55
COG0090	Ribosomal protein L2	Translation, ribosomal structure and biogenesis [J]	1.55
COG0096	Ribosomal protein S8	Translation, ribosomal structure and biogenesis [J]	1.55
COG0149	Triosephosphate isomerase	Carbohydrate transport and metabolism [G]	0.78
COG0151	Phosphoribosylamine-glycine ligase	Nucleotide transport and metabolism [F]	0.78
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.78
COG0197	Ribosomal protein L16/L10AE	Translation, ribosomal structure and biogenesis [J]	0.78
COG0228	Ribosomal protein S16	Translation, ribosomal structure and biogenesis [J]	0.78
COG0250	Transcription termination/antitermination protein NusG	Transcription [K]	0.78
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.78
COG0267	Ribosomal protein L33	Translation, ribosomal structure and biogenesis [J]	0.78
COG0275	16S rRNA C1402 N4-methylase RsmH	Translation, ribosomal structure and biogenesis [J]	0.78
COG0311	Pyridoxal 5'-phosphate synthase subunit PdxT (glutamine amidotransferase)	Coenzyme transport and metabolism [H]	0.78
COG0357	16S rRNA G527 N7-methylase RsmG (former glucose-inhibited division protein B)	Translation, ribosomal structure and biogenesis [J]	0.78
COG0381	UDP-N-acetylglucosamine 2-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	0.78
COG0414	Panthothenate synthetase	Coenzyme transport and metabolism [H]	0.78
COG0541	Signal recognition particle GTPase	Intracellular trafficking, secretion, and vesicular transport [U]	0.78
COG0557	Exoribonuclease R	Transcription [K]	0.78
COG0567	2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes	Energy production and conversion [C]	0.78
COG0587	DNA polymerase III, alpha subunit	Replication, recombination and repair [L]	0.78
COG0594	RNase P protein component	Translation, ribosomal structure and biogenesis [J]	0.78
COG0636	FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K	Energy production and conversion [C]	0.78
COG0696	Phosphoglycerate mutase (BPG-independent), AlkP superfamily	Carbohydrate transport and metabolism [G]	0.78
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	0.78
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	0.78
COG1042	Acyl-CoA synthetase (NDP forming)	Energy production and conversion [C]	0.78
COG1071	TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha	Energy production and conversion [C]	0.78
COG1660	RNase adaptor protein RapZ for GlmZ sRNA degradation, contains a P-loop ATPase domain	Signal transduction mechanisms [T]	0.78
COG1817	Predicted glycosyltransferase	General function prediction only [R]	0.78
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.78
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.78
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	0.78
COG2176	DNA polymerase III, alpha subunit (gram-positive type)	Replication, recombination and repair [L]	0.78
COG2255	Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvB	Replication, recombination and repair [L]	0.78
COG2957	Agmatine/peptidylarginine deiminase	Amino acid transport and metabolism [E]	0.78
COG3808	Na+ or H+-translocating membrane pyrophosphatase	Energy production and conversion [C]	0.78
COG4292	Low temperature requirement protein LtrA (function unknown)	Function unknown [S]	0.78
COG4776	Exoribonuclease II	Transcription [K]	0.78
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	0.78
COG0026	Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)	Nucleotide transport and metabolism [F]	0.78
COG0045	Succinyl-CoA synthetase, beta subunit	Energy production and conversion [C]	0.78
COG0081	Ribosomal protein L1	Translation, ribosomal structure and biogenesis [J]	0.78
COG0087	Ribosomal protein L3	Translation, ribosomal structure and biogenesis [J]	0.78
COG0093	Ribosomal protein L14	Translation, ribosomal structure and biogenesis [J]	0.78
COG0094	Ribosomal protein L5	Translation, ribosomal structure and biogenesis [J]	0.78
COG0097	Ribosomal protein L6P/L9E	Translation, ribosomal structure and biogenesis [J]	0.78
COG0098	Ribosomal protein S5	Translation, ribosomal structure and biogenesis [J]	0.78
COG0099	Ribosomal protein S13	Translation, ribosomal structure and biogenesis [J]	0.78
COG0101	tRNA U38,U39,U40 pseudouridine synthase TruA	Translation, ribosomal structure and biogenesis [J]	0.78
COG0105	Nucleoside diphosphate kinase	Nucleotide transport and metabolism [F]	0.78
COG0118	Imidazoleglycerol phosphate synthase glutamine amidotransferase subunit HisH	Amino acid transport and metabolism [E]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.60 %
Unclassified	root	N/A	12.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.60 %
Unclassified	root	N/A	12.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.60 %
Unclassified	root	N/A	12.40 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	77.52 %
Unclassified	root	N/A	12.40 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	77.52 %
Unclassified	root	N/A	12.40 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	59.69 %
Unclassified	root	N/A	12.40 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.55 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	44.96 %
Unclassified	root	N/A	12.40 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	1.55 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.40 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	8.53 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	3.10 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.55 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	1.55 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.55 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → environmental samples	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.40 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	8.53 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	3.10 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.55 %
Thermoleophilum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum	1.55 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.55 %
uncultured Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → environmental samples → uncultured Solirubrobacterales bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.40 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	8.53 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	3.10 %
Thermoleophilum album	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	1.55 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.55 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.78 %
uncultured Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → environmental samples → uncultured Solirubrobacterales bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_100136802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	777	Open in IMG/M
3300001686\|C688J18823_10137821	All Organisms → cellular organisms → Bacteria	1680	Open in IMG/M
3300001686\|C688J18823_10961013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	542	Open in IMG/M
3300002568\|C688J35102_118727144	Not Available	590	Open in IMG/M
3300002568\|C688J35102_120977927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4414	Open in IMG/M
3300003987\|Ga0055471_10157017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	696	Open in IMG/M
3300003997\|Ga0055466_10208339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300004013\|Ga0055465_10212865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	639	Open in IMG/M
3300004016\|Ga0058689_10091340	Not Available	631	Open in IMG/M
3300004153\|Ga0063455_100326270	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300005045\|Ga0071328_133762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	8223	Open in IMG/M
3300005162\|Ga0066814_10126129	Not Available	500	Open in IMG/M
3300005327\|Ga0070658_10084564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2609	Open in IMG/M
3300005329\|Ga0070683_100017176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	6391	Open in IMG/M
3300005329\|Ga0070683_100407314	Not Available	1297	Open in IMG/M
3300005332\|Ga0066388_100730753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1593	Open in IMG/M
3300005345\|Ga0070692_10023366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	3029	Open in IMG/M
3300005365\|Ga0070688_100000228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	29601	Open in IMG/M
3300005366\|Ga0070659_100050219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3280	Open in IMG/M
3300005438\|Ga0070701_10147032	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300005438\|Ga0070701_11324890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300005439\|Ga0070711_100034760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3364	Open in IMG/M
3300005439\|Ga0070711_100037347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3259	Open in IMG/M
3300005441\|Ga0070700_101671045	Not Available	546	Open in IMG/M
3300005506\|Ga0068912_10864818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	617	Open in IMG/M
3300005529\|Ga0070741_10027433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	8241	Open in IMG/M
3300005539\|Ga0068853_100760858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	926	Open in IMG/M
3300005563\|Ga0068855_100135946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2805	Open in IMG/M
3300005577\|Ga0068857_100065893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3222	Open in IMG/M
3300005587\|Ga0066654_10279094	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300005764\|Ga0066903_100195016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	3017	Open in IMG/M
3300005764\|Ga0066903_107332404	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300005834\|Ga0068851_10000347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	20830	Open in IMG/M
3300005834\|Ga0068851_10251235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1003	Open in IMG/M
3300005843\|Ga0068860_100003017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	17389	Open in IMG/M
3300005844\|Ga0068862_101420427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	698	Open in IMG/M
3300005885\|Ga0075284_1057383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300006576\|Ga0074047_10000882	Not Available	586	Open in IMG/M
3300006640\|Ga0075527_10021318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1694	Open in IMG/M
3300006640\|Ga0075527_10103353	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300006844\|Ga0075428_102306730	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300006845\|Ga0075421_100354006	All Organisms → cellular organisms → Bacteria	1773	Open in IMG/M
3300006854\|Ga0075425_100251547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2033	Open in IMG/M
3300006854\|Ga0075425_100345905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1712	Open in IMG/M
3300006881\|Ga0068865_100000081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	51047	Open in IMG/M
3300009093\|Ga0105240_10851304	Not Available	984	Open in IMG/M
3300009101\|Ga0105247_11815646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	508	Open in IMG/M
3300009177\|Ga0105248_10000249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	62662	Open in IMG/M
3300009789\|Ga0126307_10002045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	13530	Open in IMG/M
3300009789\|Ga0126307_10015784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5603	Open in IMG/M
3300009840\|Ga0126313_11101289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	653	Open in IMG/M
3300010037\|Ga0126304_10008940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5384	Open in IMG/M
3300010040\|Ga0126308_10005374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6010	Open in IMG/M
3300010040\|Ga0126308_10099810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1778	Open in IMG/M
3300010042\|Ga0126314_11216080	Not Available	563	Open in IMG/M
3300010048\|Ga0126373_11085701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	866	Open in IMG/M
3300010359\|Ga0126376_12558227	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300010362\|Ga0126377_13591387	Not Available	502	Open in IMG/M
3300012093\|Ga0136632_10015295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3329	Open in IMG/M
3300012186\|Ga0136620_10147857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1062	Open in IMG/M
3300012186\|Ga0136620_10277142	Not Available	730	Open in IMG/M
3300012200\|Ga0137382_10573009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	805	Open in IMG/M
3300012201\|Ga0137365_10332634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1123	Open in IMG/M
3300012469\|Ga0150984_105795902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	910	Open in IMG/M
3300012529\|Ga0136630_1013436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	3226	Open in IMG/M
3300012529\|Ga0136630_1216754	Not Available	686	Open in IMG/M
3300012531\|Ga0136640_10170923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	949	Open in IMG/M
3300012680\|Ga0136612_10285071	Not Available	839	Open in IMG/M
3300012680\|Ga0136612_10361458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	736	Open in IMG/M
3300012913\|Ga0157298_10000002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	212759	Open in IMG/M
3300012944\|Ga0137410_10449004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1046	Open in IMG/M
3300012944\|Ga0137410_10487659	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300013104\|Ga0157370_10024759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	5943	Open in IMG/M
3300013297\|Ga0157378_10032991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4576	Open in IMG/M
3300013308\|Ga0157375_10044770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4303	Open in IMG/M
3300013308\|Ga0157375_12627249	Not Available	602	Open in IMG/M
3300013503\|Ga0120127_10000003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	115321	Open in IMG/M
3300014259\|Ga0075311_1007640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1807	Open in IMG/M
3300014326\|Ga0157380_10000560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	22835	Open in IMG/M
3300014488\|Ga0182001_10399820	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300015085\|Ga0167632_1007988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1504	Open in IMG/M
3300015089\|Ga0167643_1000626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4114	Open in IMG/M
3300015242\|Ga0137412_10693852	Not Available	759	Open in IMG/M
3300017787\|Ga0183260_10000013	All Organisms → cellular organisms → Bacteria	107848	Open in IMG/M
3300018081\|Ga0184625_10537389	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300018476\|Ga0190274_10960486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	926	Open in IMG/M
3300018920\|Ga0190273_10737649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	770	Open in IMG/M
3300019881\|Ga0193707_1034933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1637	Open in IMG/M
3300020001\|Ga0193731_1021507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1688	Open in IMG/M
3300020076\|Ga0206355_1097705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	550	Open in IMG/M
3300021363\|Ga0193699_10000015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	166666	Open in IMG/M
3300021363\|Ga0193699_10025054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2201	Open in IMG/M
3300021363\|Ga0193699_10058836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1499	Open in IMG/M
3300021510\|Ga0222621_1005447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2240	Open in IMG/M
3300021560\|Ga0126371_12323539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	648	Open in IMG/M
3300023070\|Ga0247755_1000001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	299511	Open in IMG/M
3300025321\|Ga0207656_10177973	Not Available	1020	Open in IMG/M
3300025552\|Ga0210142_1016500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1369	Open in IMG/M
3300025559\|Ga0210087_1003501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3657	Open in IMG/M
3300025814\|Ga0210101_1000207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	21638	Open in IMG/M
3300025814\|Ga0210101_1000285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	18172	Open in IMG/M
3300025814\|Ga0210101_1030243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1476	Open in IMG/M
3300025898\|Ga0207692_10368092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → environmental samples → uncultured Solirubrobacterales bacterium	889	Open in IMG/M
3300025903\|Ga0207680_10000567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17482	Open in IMG/M
3300025909\|Ga0207705_10073706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2477	Open in IMG/M
3300025916\|Ga0207663_10025318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	3429	Open in IMG/M
3300025916\|Ga0207663_10184123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	1494	Open in IMG/M
3300025934\|Ga0207686_10189224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1466	Open in IMG/M
3300025938\|Ga0207704_10000018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	153994	Open in IMG/M
3300025941\|Ga0207711_10000020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	363325	Open in IMG/M
3300025944\|Ga0207661_10000224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	36954	Open in IMG/M
3300025944\|Ga0207661_10001530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	15695	Open in IMG/M
3300026023\|Ga0207677_10000304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	36147	Open in IMG/M
3300026041\|Ga0207639_10123204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2134	Open in IMG/M
3300026044\|Ga0208287_1016400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	671	Open in IMG/M
3300026078\|Ga0207702_10002839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	16194	Open in IMG/M
3300026142\|Ga0207698_10260923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1592	Open in IMG/M
3300028380\|Ga0268265_10154358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1941	Open in IMG/M
3300028381\|Ga0268264_10001191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	25160	Open in IMG/M
3300028722\|Ga0307319_10000014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	90225	Open in IMG/M
3300028875\|Ga0307289_10022146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2465	Open in IMG/M
3300030006\|Ga0299907_10070903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2818	Open in IMG/M
3300030006\|Ga0299907_10076262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	2719	Open in IMG/M
3300031228\|Ga0299914_10000004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	190181	Open in IMG/M
3300031229\|Ga0299913_11165365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	731	Open in IMG/M
3300032770\|Ga0335085_10068824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	4693	Open in IMG/M
3300032829\|Ga0335070_10331088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1469	Open in IMG/M
3300034090\|Ga0326723_0035842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2072	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.09%
Host-Associated	Host-Associated	27.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.36%
Plants	Host-Associated → Plants	27.91%
Aquatic	Environmental → Aquatic	14.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.40%
Freshwater	Environmental → Aquatic → Freshwater	6.98%
Marine	Environmental → Aquatic → Marine	6.20%
Sediment	Environmental → Aquatic → Sediment	1.55%
Peat	Environmental → Terrestrial → Peat	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.78%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.11%
Loam	Environmental → Terrestrial → Soil → Loam	17.05%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.85%
Ice	Environmental → Aquatic → Freshwater → Ice	6.98%
Wetlands	Environmental → Aquatic → Marine → Wetlands	6.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.55%
Sand	Environmental → Terrestrial → Soil → Sand	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.78%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.85%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	6.98%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	6.20%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.10%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.55%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.55%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.30%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	6.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.98%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	6.20%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	6.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.10%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.10%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.10%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.33%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.55%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.55%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.55%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.78%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.78%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005045	Permafrost microbial communities from Fox Tunnel, Fairbanks, Alaska, USA	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005506	Soil microbial communities from Colorado Plateau, USA - Soil Crust after dry out 3A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005885	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_401	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012186	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012529	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ568 (21.06)	Environmental	Open in IMG/M
3300012531	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ864 (21.06)	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300014259	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300015085	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4B, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015089	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8A, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023070	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L096-311B-4	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025552	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025814	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026044	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1001368022	3300000956	Soil	MNGPTTRHTWMTRLALRISASSGLPLPPAKAAPCVLDLLGQARPQAHPAMEPFIQWPI*
C688J18823_101378213	3300001686	Soil	MTSSVTLYTRMTAVALRISASSGLPLAPPKAAPCVLDLLGHSRPRAHTVTKEVI*
C688J18823_109610132	3300001686	Soil	VADPTTMHTWMTHLALRISSSSGLPLQPAKAAPCVLDLLGQSRPQAHLVVQSAT*
C688J35102_1187271442	3300002568	Soil	QALGGEMPASATMHPWMPRVALRISASSGLPLQPAKAAPCVLDLLDHARPQGHMATKAGI
C688J35102_1209779278	3300002568	Soil	MPATPTKHTWMPRLAHCISASSDLPLPPAKAAPCDLDLLGQPRPQAHLAREAGI*
Ga0055471_101570171	3300003987	Natural And Restored Wetlands	MPAFPTKHTWMTRLALRISASSGLPLQPAKAAPCVLDLLDQSGPQAHLARKAGI*
Ga0055466_102083392	3300003997	Natural And Restored Wetlands	MAGPPTPHAWMTRVALRISVSSGLPLAPPKAAPCVLDLLGRTRPQSHAAEDPAI*
Ga0055465_102128651	3300004013	Natural And Restored Wetlands	MTGPSTAHPWMTHVAQRISASSDLPLAPPKAASCVLDLLDHTHPQGHPAKEPVI*
Ga0058689_100913402	3300004016	Agave	LIPATATTRTWMTRMARRISASSGLPLQPAKAAPCVLDLLGHARPQAHAVTEAGI*
Ga0063455_1003262702	3300004153	Soil	MTAFPAMHTRMTRLARRMSSSSDLPLPPAKAAPCVLDLLGQARPRVHPAGKAVI*
Ga0071328_1337624	3300005045	Permafrost	MTEPTTVHTWMTRLARRMSASSGARLPLANFAPCVLDLLGQARPQAHTAMTSVI*
Ga0066814_101261292	3300005162	Soil	MMIFTTPHAWMTHVALRISASSDSPLAPPKAASCVLDLLGHGRLQSHVAKQFTI*
Ga0070658_100845644	3300005327	Corn Rhizosphere	MPAFPTQHTWMTPLAHRISASSGLPLAPPKAAPCVLDLLDQSRPQAHCAGKAGI*
Ga0070683_1000171763	3300005329	Corn Rhizosphere	MLDPTTRHAWMTRLARRISAASGLPLPPAKAAPCVLDLLDQTRPQSHLAVESNIYAKEEANA*
Ga0070683_1004073142	3300005329	Corn Rhizosphere	MPAPATMHTRMAPVALRISASSGLPLAPPKAAPYLLDLLGHGRPRAHLAAKAGI*
Ga0066388_1007307532	3300005332	Tropical Forest Soil	LIPATATTYAWMTRMARRISVSSGLPSQPAKAAPCVRDLLGHARHPAHVATEAGI*
Ga0070692_100233663	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MTASAVMHTRMTNVARRISASSGLPLAPPKAAPCVLDLLGHDRPRSHMTTKAVI*
Ga0070688_10000022821	3300005365	Switchgrass Rhizosphere	MASFATMHTRMTAVALRISASSGLPLAPPKASPCVLDLLGHDRPRAHLAAKEAI*
Ga0070659_1000502196	3300005366	Corn Rhizosphere	MPAFPTQHTWMTRLALRISASSGSPLAPPKASPCVLDLLDQSRPQAHWAGKAGI*
Ga0070701_101470323	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MTDPTTPHTRMMDVAHRISASSDLPLAPPKAAPCVLDLLDHAHPRSHTAVESVI*
Ga0070701_113248902	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MAASTTPHTWMTDVALRISASSGLPLAPPKGAPCVLDLLGHARPQAHAAAKAAI*
Ga0070711_1000347603	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPATPTKHTWMTRLARRISASSGLPLPPAKAAPCVLDLLDQSRPQAHFAREAGI*
Ga0070711_1000373475	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MVDPTAKHAWMTHLALRISASSGLPLPPAKAAPCVLDLLGQARPQSHLAVEPTI*
Ga0070700_1016710452	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	YPVRPPEKMVDPTTPHTWMTRVAHRISASSGLPLAPSKAAPCVLDLLGHARPQSHAAVESTI*
Ga0068912_108648181	3300005506	Soil	MTTTPTLHTRMTSVARRISASSGLPLAPPKAAPCVLDLLGHGRP
Ga0070741_1002743311	3300005529	Surface Soil	MPATTTTHPWMTRMARRITASSGSPLAPPKASPSILELIGHARPQARVAAEADI*
Ga0068853_1007608582	3300005539	Corn Rhizosphere	MINPTTRHAWMTRLALRISASSGLPLPPAKAAPCVLDLLGQSRPQSHLAMESTI*
Ga0068855_1001359462	3300005563	Corn Rhizosphere	MMGPTTKHAWMTRPALRISASSGLPLQPAKAAPCVLDLLGPARPQSHFVVEPII*
Ga0068857_1000658934	3300005577	Corn Rhizosphere	MNPMTKHTWMTRLARRISASSGLSLPPAKTAPCVLDLLGQARPQSHFVMEFTA*
Ga0066654_102790943	3300005587	Soil	MPASATMHPWMSRVALRISASSGLPLQPAKAAPCVLALLDHACPQGHMATKAGI*
Ga0066903_1001950162	3300005764	Tropical Forest Soil	MTAFLTTHTPMTRMARRMPSSSGLRLQPANAAPCVLGLLGHARPEAHAARKAVI*
Ga0066903_1073324041	3300005764	Tropical Forest Soil	MIASAVMHTRMTAVALRISASSGLTLAPPMAAPCVLDLLDHARPQIHAATESTV*
Ga0068851_100003472	3300005834	Corn Rhizosphere	MTRHTWMTHLALRISVSSGLPLAPPKASPCVLDLLGQARPQPHLVMDPTA*
Ga0068851_102512352	3300005834	Corn Rhizosphere	MTAFTTKHTWMTRLALRISASSGLPLPPAKAAPCVLDLLGQSRPQAHLAGKAVI*
Ga0068860_10000301718	3300005843	Switchgrass Rhizosphere	MTVNPAPHIRVTHVALRISASSGLPLAPPKAAPCVLDLLGHARPRLHAPEWTII*
Ga0068862_1014204272	3300005844	Switchgrass Rhizosphere	MAGPATRHTWMTRLALRISSSSGLPLPPAKAAPCVLDLLGQTRPQAHLVTQPAI*
Ga0075284_10573832	3300005885	Rice Paddy Soil	MTVSTTPHAWMTRVALRISSSSGLPLAPPKAAPCVLDLLDHARPQSHAAMKAVI*
Ga0074047_100008822	3300006576	Soil	MTGSMTLHTRMTAVAHRISTSSDLPLAPPKAAPCVLDLLGHDRPRSHSAMEPVIYSATVGRSR*
Ga0075527_100213183	3300006640	Arctic Peat Soil	MTNPTTPHAWMTRVALRISASSGLPLQPAKAAPCVLDLLGHARPQSHAAMELVIY*
Ga0075527_101033532	3300006640	Arctic Peat Soil	MADPTTTHAWMTHVALRISASSGLPLQPAKAAPCVLDLLGHARPQSHVAAESAI*
Ga0075428_1023067302	3300006844	Populus Rhizosphere	VNISPTNRTWMTRMARRISSSSGLPLQPAKTAPCVLDLLGRARPQAHLAGEVLT*
Ga0075421_1003540062	3300006845	Populus Rhizosphere	VNISPTNRTWMTRMARRISSSSGLPLQPAKTAPCVLDLLGHARPQAHLAGEVLT*
Ga0075425_1002515472	3300006854	Populus Rhizosphere	MEAAMTNLTTSHARMSRVALRISASSGLPLAPPKAAPCVLDLLDHAHPRSHAAVRLVIG*
Ga0075425_1003459053	3300006854	Populus Rhizosphere	MTTPTTPHAWMTRVALRISASSGLPLAPPKAAPCVLDLLGHARPQSHAAMRVVIP*
Ga0068865_1000000812	3300006881	Miscanthus Rhizosphere	MTRLALRISASSGLPLQPAKAAPCVLDLLGQARPQSHLAGKSTI*
Ga0105240_108513043	3300009093	Corn Rhizosphere	MVSSATLHTWMAPVALRSSASSGLPLAPPKAAPCVLDLLDHERPQAHTVTKETI*
Ga0105247_118156462	3300009101	Switchgrass Rhizosphere	MINTTAPHTWMTRVALRISASSGLPLQPAKAAPCVLDLLGHARPQAHAAMKSVI*
Ga0105248_1000024919	3300009177	Switchgrass Rhizosphere	MTRHTWMTRLALRISASSDLPLPPAKAASCVLDLLGQARPQEHLAMHPTLREG*
Ga0126307_1000204510	3300009789	Serpentine Soil	MTAFPTTHPRMTRLARRMSSSSGLPLPPAKAAPCVLDLLGQARPRARAAGKAAI*
Ga0126307_100157845	3300009789	Serpentine Soil	MPATMTAHTWMTRVARRTSASSGSPLAPPKASPCVLELLGHARPQAHAAPEAGI*
Ga0126313_111012893	3300009840	Serpentine Soil	HAWMTRMAHRISASSGSPLAPPKASPCVLDLLGHARHQAHVAMEAGI*
Ga0126304_100089404	3300010037	Serpentine Soil	MPATMTAHTWMTRVARRTSASSGSPLAPPKASPCVLELLGHARPQAHAATEAGI*
Ga0126304_100322515	3300010037	Serpentine Soil	MADPQSPHTRMTRAALRISASSGLPLAPPKAAPCVLDLLGRVRPRSHADWGSAI*
Ga0126308_100053744	3300010040	Serpentine Soil	MTAFPTTHTRMTSLARRMSSSSGLPLPPAKAAPCVLDLLGQARPRARAAGKAAI*
Ga0126308_100998103	3300010040	Serpentine Soil	MTPTMTSHTWMTRVARRMSSSSGSPLPPAKASPCVLDLLGHARPQAQLAMDGVI*
Ga0126314_112160801	3300010042	Serpentine Soil	TMTSHTWMTRVARRMSSSSGSPLPPAKASPCVLDLLGHARPQAQLAMDGVI*
Ga0126373_110857012	3300010048	Tropical Forest Soil	MTRLALRISASSGLPLLPAKAAPCVLDLLGQARPQSHLAAKSTL*
Ga0126376_125582272	3300010359	Tropical Forest Soil	DTMTPHTWMTRVALRSSAPSGLPLPPAKAAPCVLDLLDHARPQAHAAANEDI*
Ga0126377_135913872	3300010362	Tropical Forest Soil	YRVEMTVNPASHTRVTHVALRISTSSGLPLAPPKAVPCVLDLLGHARLRVHAPEWTII*
Ga0136632_100152954	3300012093	Polar Desert Sand	MSDSTTTHTWMTPVALRISSSSGSPLAPPKASPCVLDLLGHARHQAHAAAESIT*
Ga0136620_101478571	3300012186	Polar Desert Sand	MPATPIKHTWMTHLTRRISSSSGSPLAPPKASPCVLDLLGQARLQAHSIGEAGI*
Ga0136620_102771422	3300012186	Polar Desert Sand	MTASPTTHTRMTRLARRMPSSSGLPLPPAKAAPCLLDLLGQARPRAHVVGKAVI*
Ga0137382_105730091	3300012200	Vadose Zone Soil	MPASATLHTRMTAVALRIFASSGLPLAPPKAAPCVLDLLGHDRPRAHTAMKAGI*
Ga0137365_103326342	3300012201	Vadose Zone Soil	MTVSTTPHAWMTRVALRISASSGLPLAPPKAAPCVLDLLDHTRPQSHAAMKAVI*
Ga0150984_1057959022	3300012469	Avena Fatua Rhizosphere	MTSSATLYNRMTAVARRISASSGLPLAPPKAAPCVLDLLGHSRPRAHTVTKEVI*
Ga0136630_10134363	3300012529	Polar Desert Sand	MADPTTTHAWMTPVALRISSSSGSPLAPPKASPCLLDLLGHARHQAHVVAESTI*
Ga0136630_12167542	3300012529	Polar Desert Sand	MTASPTTHTRMTRLARRMPSSSGLPLPPAKAAPCLLDLLGQARPRAHVAEKAVI*
Ga0136640_101709233	3300012531	Polar Desert Sand	MPVTPIKHTWMTHLTRRISSSSGSPLAPPKASPCVLDLLGQARLQ
Ga0136612_102850712	3300012680	Polar Desert Sand	MTASPATHTRMTRLARRMPSSSGLPLPPAKAAPCALDLLGQARPRAHVAGKAVI*
Ga0136612_103614582	3300012680	Polar Desert Sand	MPATPIKHTWMTHLTRRISSSSGSPLAPPKASPCVLDLLGQAGLQAHSTGEAGI*
Ga0157298_1000000226	3300012913	Soil	MTMNPTTPHTWMTRVALRMSASSGLPLAPPKAAPCVLDLLGHACPQAHAAMEFTV*
Ga0137410_104490042	3300012944	Vadose Zone Soil	MTNTTPPHTWMTHLALRISSSSDLPLPPAKAAPCALDLLGQPRPQAHAAMASVI*
Ga0137410_104876591	3300012944	Vadose Zone Soil	MTNPTTPHAWMTRAALHISASSDLPLAPPKAASCVLDLLDRARPQSHASMGLVID*
Ga0157370_100247597	3300013104	Corn Rhizosphere	MPDPSTPHTWMTRVALRISTSSGLPLQPAKAAPCVLGLLGHARPQAHAAEGSGI*
Ga0157378_100329913	3300013297	Miscanthus Rhizosphere	MHTWMTRLALRIFSSSGLPLPPAKAAPCVLDLLGQLRPQAHLAVQSAP*
Ga0157375_100447705	3300013308	Miscanthus Rhizosphere	MEAQMTNSPTPHAWMTHVALRISASSGLPLQPAKAAPCVLDLLGHVRPQSHVARELVIS*
Ga0157375_126272491	3300013308	Miscanthus Rhizosphere	MVEPVTPHPRMTGEYLRSSASSGSPLAPPKASPCVLDLLGLARPRVPAATGSTI
Ga0120127_10000003120	3300013503	Permafrost	MTTSTTTHTWMTRVALRISASSGLPLQPAKAAPCVLDLLDHPRPQAHVAMKAVI*
Ga0075311_10076404	3300014259	Natural And Restored Wetlands	MTVSTTPRTWMTHVALRISASSGLPLAPPKAAPCVLDLLDHARPQAHAAMKAVI*
Ga0157380_1000056016	3300014326	Switchgrass Rhizosphere	MPATPTKHTWMTRLAHRISASSGLPLPPAKAAPCVLDLLDQPRPQAHFAREAGI*
Ga0182001_103998201	3300014488	Soil	SVDSTTRHAWMTRLALRISASSGLPLPPAKAAPCVLDLLDQARPQSHLVVKSTL*
Ga0167632_10079882	3300015085	Glacier Forefield Soil	MIGQSGTHAWMAHMALRISASSGLPLQPAKASSCVLDLLGHLHPQSHVPDWPII*
Ga0167643_10006269	3300015089	Glacier Forefield Soil	MLLVQPTHPWMTHDAFAGSASSGLPLPPAKAAPCVLDQLDLARPQGHAGHTRSI*
Ga0137412_106938522	3300015242	Vadose Zone Soil	MVMMHASPTGHTWMTRVMLRSSSSSGSPLAPPKASPCVLDLLDPARPQARPVEKARISG*
Ga0183260_10000013106	3300017787	Polar Desert Sand	MTASPATHTRMTRLARRMPSSSGLPLPPAKAAPCALDLLGQARPRAHVAGKAVI
Ga0184625_105373892	3300018081	Groundwater Sediment	MTSQSGAHAWMTRLALRISASSGLPLQPAKAAPCVLDLLDQSGPQAHLARKEGI
Ga0190274_109604862	3300018476	Soil	MIDPQFPHTRMTRLALRISASSGLPLAPPKAAPCVLDLLGQARPRPHANQESII
Ga0190273_107376492	3300018920	Soil	MTVSTTPHAWMTHVALRISASSGLPLQPAKAAPCVLDLLGHAPPQSHAAMKAAI
Ga0193707_10349331	3300019881	Soil	MTASTTTHAWMTPVALRISSSSGLPLAPPKAAPCVLDLLGHVRPQSHAAMKAVI
Ga0193731_10215073	3300020001	Soil	MTASTTMHTWMTRVALRISASSGLPLQPAKAAPCVLDLLDHPRPQAHVAMKAVI
Ga0206355_10977052	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	MPTFPTEHTWMTRLAHRISASSRSPLAPPEASPCVLDLLGQSRPQAHSARKASI
Ga0193699_1000001559	3300021363	Soil	MTTSTTTHTWMTRVALRISASSGLPLQPAKAAPCVLDLLDHSRPQAHVAMKAVI
Ga0193699_100250542	3300021363	Soil	MIASTTRHTRMTRLALRISASSGLPLQPAKAAPCVLDLLGQSRPQAHLAVKAII
Ga0193699_100588362	3300021363	Soil	MRISATRHTWMTRLALRISASSGLPLQPAKAAPCVLDLLGQSRPQAHLAAEMRI
Ga0222621_10054473	3300021510	Groundwater Sediment	MTASTTTHTWMTRVALRISASSDLPLLPAKAAPCVLDLLGHSRPQAHVAMKAVI
Ga0126371_123235392	3300021560	Tropical Forest Soil	MVGPMTTHTWVTHAALRISSSSGLPLAPPKAAPCVFDLLGRVRPQAHVAMEPTI
Ga0247755_100000159	3300023070	Plant Litter	MIGSTTKHAWMTRLALRISASSGLPLPPAKAAPCVLDLLGPARPQSHFVVEPII
Ga0207656_101779732	3300025321	Corn Rhizosphere	MTAFTTKHTWMTRLALRISASSGLPLPPAKAAPCVLDLLGQSRPQAHLAGKAVI
Ga0210142_10165002	3300025552	Natural And Restored Wetlands	MIDSTTTPALATAVALRISSSSGSPLAPPKASPCVLDLLGHARRQTDGAVESVI
Ga0210087_10035013	3300025559	Natural And Restored Wetlands	MPNAMTLHTWMTPVALHITASSGLPLAPPKAAPCVLDLLGHARPQVHTAMALGI
Ga0210101_100020711	3300025814	Natural And Restored Wetlands	MMNSTTPHPWMTRVALRISASSGLPLQPAKAAPCVLDLLGHAPPQAHAAMKSTI
Ga0210101_10002853	3300025814	Natural And Restored Wetlands	MPDLTTPHTWMAAVALRISASSGLPLQPAKAAPCVLDLLGHARPQAHAAVRSGI
Ga0210101_10302432	3300025814	Natural And Restored Wetlands	MTTPATRHTWMARVALRSSASSDLPLAPPKAASCVLALLGHAHPQAHLAAEEAI
Ga0207692_103680921	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	HARMTRAAHRISASSGLPLAPPKAAPCVLDLLGLARPQAHAAMERTIL
Ga0207680_1000056716	3300025903	Switchgrass Rhizosphere	MHTWMTRLALRISSSSGLPLPPAKAAPCVLDLLGQSRPQAHLAVQSAP
Ga0207705_100737064	3300025909	Corn Rhizosphere	MPAFPTQHTWMTPLAHRISASSGLPLAPPKAAPCVLDLLDQSRPQAHCAGKAGI
Ga0207663_100253183	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MPATPTKHTWMTRLARRISASSGLPLPPAKAAPCVLDLLDQSRPQAHFAREAGI
Ga0207663_101841232	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MVDPTAKHAWMTHLALRISASSGLPLPPAKAAPCVLDLLGQARPQSHLAVEPTI
Ga0207686_101892242	3300025934	Miscanthus Rhizosphere	MTASTTTHAWMTRMALRISASSGLPLEPPKAAPCVLDLLDHARPQAHATMKAVI
Ga0207704_1000001846	3300025938	Miscanthus Rhizosphere	MTRLALRISASSGLPLQPAKAAPCVLDLLGQARPQSHLAGKSTI
Ga0207711_1000002052	3300025941	Switchgrass Rhizosphere	MTRHTWMTRLALRISASSDLPLPPAKAASCVLDLLGQARPQEHLAMHPTLREG
Ga0207661_1000022432	3300025944	Corn Rhizosphere	MTRLARRISAASGLPLPPAKAAPCVLDLLDQTRPQSHLAVESNIYAKEEANA
Ga0207661_1000153012	3300025944	Corn Rhizosphere	MPASATLHTRLTPVALRISASSGLPLAPPKAAPCVLDLLGHDRPRAHTAAKAGI
Ga0207677_1000030431	3300026023	Miscanthus Rhizosphere	MADFTTPRTWMTRVALRISASSGLPLAPPKAAPCVLDLLGHARPQSHAAMESAI
Ga0207639_101232043	3300026041	Corn Rhizosphere	MINPTTRHAWMTRLALRISASSGLPLPPAKAAPCVLDLLGQSRPQSHLAMESTI
Ga0208287_10164002	3300026044	Natural And Restored Wetlands	MTVSTTPRTWMTHVALRISASSGLPLAPPKAAPCVLDLLDHARPQAHAAMKAVI
Ga0207702_1000283916	3300026078	Corn Rhizosphere	MTRLALRISASSGLPLQPAKAAPCVLDLLGQARPQSRLAVEPII
Ga0207698_102609232	3300026142	Corn Rhizosphere	MLSSSTLHTRMTTVALRISASSGLPLPPAKAAPCVLDLLGHGRPRAHTAAKESI
Ga0268265_101543583	3300028380	Switchgrass Rhizosphere	MAGPATRHTWMTRLALRISSSSGLPLPPAKAAPCVLDLLGQTRPQAHLVTQPAI
Ga0268264_1000119116	3300028381	Switchgrass Rhizosphere	MTVNPAPHIRVTHVALRISASSGLPLAPPKAAPCVLDLLGHARPRLHAPEWTII
Ga0307319_1000001432	3300028722	Soil	MPAFPAQHTWMTRLAHRISASSGLPLAPPKAAPCVLNLLDQSRPQAHCAGKAGI
Ga0307289_100221463	3300028875	Soil	ALRISASSGLPLAPPKAAPCVLDLLGRAQPASPEAMERITH
Ga0299907_100709035	3300030006	Soil	MPTTTTTHTWMTRMARRSSASSGLPLPPAKAAPCVLDLLGHARPQAHVAVEAGI
Ga0299907_100762622	3300030006	Soil	MTPTMTSHTWMTRVARRMSSSSGLPLPPAKAAPCVLDLLGHARPQARLAKDGVI
Ga0299914_1000000433	3300031228	Soil	MTASATTHTWMTRVALRISASSGLPLAPPKAAPCVLDLLGHARPQAHVATKEAI
Ga0299913_111653652	3300031229	Soil	MTDFPTTHTRMTRLARRMPSSSGLPLPPAKAAPCVLGLLGQARPRVHAAGKAAI
Ga0335085_100688242	3300032770	Soil	MPAFPTKHTWMPRLAHRISASSGLPLPPAKAAPCVLDLLDQPRPQAHLARKAGI
Ga0335070_103310882	3300032829	Soil	MTASTTTHTWMTRVARRISASSGLPLAPPKAAPCVLDLLGHARPQAHAAMKAVI
Ga0326723_0035842_568_732	3300034090	Peat Soil	MTTSATTHTRMTRVAPRISASSGLPLAPPRAAPCALDLLGHTRPQAHLAPKEVI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063671

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences