Metagenome / Metatranscriptome Family F063709

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063709
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	63 residues
Representative Sequence	MDQCSIRVYTLNALTLIISLTNLEASLKILLLIISIVYTSMKIYDWLIFKIKGKNADNSKEITQD
Number of Associated Samples	94
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.91 %
% of genes near scaffold ends (potentially truncated)	17.83 %
% of genes from short scaffolds (< 2000 bps)	55.81 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.388 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (27.132 % of family members)
Environment Ontology (ENVO)	Unclassified (58.140 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (55.814 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.37% β-sheet: 0.00% Coil/Unstructured: 37.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00118	Cpn60_TCP1	17.05
PF00166	Cpn10	7.75
PF13884	Peptidase_S74	5.43
PF13539	Peptidase_M15_4	4.65
PF01391	Collagen	1.55
PF08291	Peptidase_M15_3	0.78
PF13306	LRR_5	0.78
PF05257	CHAP	0.78
PF00303	Thymidylat_synt	0.78
PF12081	GldM_N	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	17.05
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	7.75
COG0207	Thymidylate synthase	Nucleotide transport and metabolism [F]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.77 %
Unclassified	root	N/A	30.23 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.39 %
Unclassified	root	N/A	30.23 %
Viruses	superkingdom	All Organisms → Viruses	19.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.39 %
Unclassified	root	N/A	30.23 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	10.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.23 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	10.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.88 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.10 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	1.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.23 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	10.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.88 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.33 %
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	1.55 %
Oligoflexia	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
candidate division Zixibacteria	phylum	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.23 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	10.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.88 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.33 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.55 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.78 %
Bdellovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales	0.78 %
unclassified candidate division Zixibacteria	no rank	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.23 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	8.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.88 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.55 %
candidate division Zixibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	0.78 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	0.78 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.78 %
unclassified Bdellovibrionales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → unclassified Bdellovibrionales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.23 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.88 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.55 %
Bdellovibrionales bacterium RIFCSPHIGHO2_01_FULL_40_29	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → unclassified Bdellovibrionales → Bdellovibrionales bacterium RIFCSPHIGHO2_01_FULL_40_29	0.78 %
unclassified Methylophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae	0.78 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.78 %
candidate division Zixibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.23 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.88 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.55 %
Methylophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	0.78 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.78 %
Bdellovibrionales bacterium RIFCSPHIGHO2_01_FULL_40_29	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → unclassified Bdellovibrionales → Bdellovibrionales bacterium RIFCSPHIGHO2_01_FULL_40_29	0.78 %
candidate division Zixibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000124\|BS_KBA_SWE12_21mDRAFT_c10001905	Not Available	7563	Open in IMG/M
3300000124\|BS_KBA_SWE12_21mDRAFT_c10006478	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3979	Open in IMG/M
3300000126\|BS_KBB_SWE26_205mDRAFT_c1032072	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300000241\|BS_KBA_SWE21_205mDRAFT_10125618	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300002131\|M2t2BS1_1044048	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300002447\|JGI24768J34885_10000863	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9228	Open in IMG/M
3300003277\|JGI25908J49247_10000098	Not Available	23075	Open in IMG/M
3300003277\|JGI25908J49247_10007184	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	3525	Open in IMG/M
3300003277\|JGI25908J49247_10013299	All Organisms → cellular organisms → Bacteria	2532	Open in IMG/M
3300003277\|JGI25908J49247_10058753	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300003393\|JGI25909J50240_1042102	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300003404\|JGI25920J50251_10012068	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2911	Open in IMG/M
3300003404\|JGI25920J50251_10096519	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300004096\|Ga0066177_10185876	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300004124\|Ga0066178_10229156	Not Available	537	Open in IMG/M
3300004126\|Ga0066179_10130014	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300004481\|Ga0069718_15709826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → unclassified Bdellovibrionales → Bdellovibrionales bacterium RIFCSPHIGHO2_01_FULL_40_29	4396	Open in IMG/M
3300005517\|Ga0070374_10107576	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300005581\|Ga0049081_10033619	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
3300005581\|Ga0049081_10091685	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300005582\|Ga0049080_10204828	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300006484\|Ga0070744_10001737	Not Available	6563	Open in IMG/M
3300006484\|Ga0070744_10087311	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300006802\|Ga0070749_10286271	Not Available	926	Open in IMG/M
3300006803\|Ga0075467_10647893	All Organisms → Viruses	539	Open in IMG/M
3300006920\|Ga0070748_1055418	All Organisms → Viruses → Predicted Viral	1567	Open in IMG/M
3300007276\|Ga0070747_1024000	All Organisms → Viruses → Predicted Viral	2458	Open in IMG/M
3300007559\|Ga0102828_1091415	All Organisms → Viruses	735	Open in IMG/M
3300008448\|Ga0114876_1004451	All Organisms → Viruses	9123	Open in IMG/M
3300009026\|Ga0102829_1164846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	712	Open in IMG/M
3300009085\|Ga0105103_10632879	All Organisms → Viruses	610	Open in IMG/M
3300009158\|Ga0114977_10051346	All Organisms → cellular organisms → Bacteria	2552	Open in IMG/M
3300009158\|Ga0114977_10328614	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300009159\|Ga0114978_10716519	Not Available	569	Open in IMG/M
3300009164\|Ga0114975_10119143	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300009180\|Ga0114979_10127236	Not Available	1566	Open in IMG/M
3300009183\|Ga0114974_10568656	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	628	Open in IMG/M
3300009185\|Ga0114971_10005121	Not Available	8838	Open in IMG/M
3300009684\|Ga0114958_10007880	Not Available	6895	Open in IMG/M
3300010160\|Ga0114967_10003287	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	13310	Open in IMG/M
3300010160\|Ga0114967_10353593	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300012663\|Ga0157203_1006055	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2254	Open in IMG/M
3300012778\|Ga0138269_1370741	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300015050\|Ga0181338_1032497	Not Available	791	Open in IMG/M
3300017716\|Ga0181350_1009200	All Organisms → cellular organisms → Bacteria	2831	Open in IMG/M
3300017722\|Ga0181347_1001403	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	8073	Open in IMG/M
3300017754\|Ga0181344_1001311	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9198	Open in IMG/M
3300017777\|Ga0181357_1050404	Not Available	1626	Open in IMG/M
3300017777\|Ga0181357_1178942	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300017780\|Ga0181346_1049329	All Organisms → Viruses → Predicted Viral	1707	Open in IMG/M
3300017780\|Ga0181346_1054850	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300017784\|Ga0181348_1009418	All Organisms → Viruses → Predicted Viral	4257	Open in IMG/M
3300017785\|Ga0181355_1100242	Not Available	1198	Open in IMG/M
3300019096\|Ga0188835_1001123	All Organisms → cellular organisms → Bacteria	3417	Open in IMG/M
3300019122\|Ga0188839_1009520	Not Available	1155	Open in IMG/M
3300019781\|Ga0181360_121955	Not Available	515	Open in IMG/M
3300019784\|Ga0181359_1004148	All Organisms → cellular organisms → Bacteria	4561	Open in IMG/M
3300019784\|Ga0181359_1008868	All Organisms → cellular organisms → Bacteria	3493	Open in IMG/M
3300020205\|Ga0211731_11490468	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300020205\|Ga0211731_11643358	Not Available	6514	Open in IMG/M
3300020548\|Ga0208856_1004042	All Organisms → cellular organisms → Bacteria	3235	Open in IMG/M
3300021961\|Ga0222714_10125172	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium	1580	Open in IMG/M
3300021962\|Ga0222713_10004118	Not Available	14682	Open in IMG/M
3300021962\|Ga0222713_10609159	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300021963\|Ga0222712_10000774	Not Available	40827	Open in IMG/M
3300021963\|Ga0222712_10366482	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	884	Open in IMG/M
3300022407\|Ga0181351_1054982	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300022407\|Ga0181351_1057246	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300022407\|Ga0181351_1180693	Not Available	726	Open in IMG/M
3300024346\|Ga0244775_10017370	Not Available	6632	Open in IMG/M
3300024346\|Ga0244775_10355385	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300024346\|Ga0244775_10704384	All Organisms → Viruses	813	Open in IMG/M
3300024346\|Ga0244775_11377373	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300024348\|Ga0244776_10304464	All Organisms → Viruses	1087	Open in IMG/M
3300025645\|Ga0208643_1127643	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300025652\|Ga0208134_1041998	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300027320\|Ga0208923_1000759	All Organisms → cellular organisms → Bacteria	6655	Open in IMG/M
3300027621\|Ga0208951_1157198	Not Available	589	Open in IMG/M
3300027659\|Ga0208975_1006928	All Organisms → Viruses → Predicted Viral	4072	Open in IMG/M
3300027659\|Ga0208975_1014012	All Organisms → cellular organisms → Bacteria	2710	Open in IMG/M
3300027693\|Ga0209704_1067857	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300027721\|Ga0209492_1005960	Not Available	4000	Open in IMG/M
3300027721\|Ga0209492_1062218	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300027721\|Ga0209492_1150955	Not Available	810	Open in IMG/M
3300027732\|Ga0209442_1196000	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300027733\|Ga0209297_1361588	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	523	Open in IMG/M
3300027734\|Ga0209087_1003003	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9350	Open in IMG/M
3300027736\|Ga0209190_1011297	All Organisms → cellular organisms → Bacteria	5306	Open in IMG/M
3300027746\|Ga0209597_1003372	Not Available	9904	Open in IMG/M
3300027754\|Ga0209596_1000178	Not Available	58258	Open in IMG/M
3300027756\|Ga0209444_10170894	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300027759\|Ga0209296_1000224	Not Available	50372	Open in IMG/M
3300027759\|Ga0209296_1034164	All Organisms → cellular organisms → Bacteria	2774	Open in IMG/M
3300027763\|Ga0209088_10002965	Not Available	10137	Open in IMG/M
3300027763\|Ga0209088_10101814	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300027770\|Ga0209086_10009362	All Organisms → cellular organisms → Bacteria	6721	Open in IMG/M
3300027782\|Ga0209500_10435189	Not Available	519	Open in IMG/M
3300027797\|Ga0209107_10001923	Not Available	11583	Open in IMG/M
3300027798\|Ga0209353_10006471	Not Available	5877	Open in IMG/M
3300027798\|Ga0209353_10088598	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300027836\|Ga0209230_10068581	Not Available	1908	Open in IMG/M
3300027892\|Ga0209550_10020809	All Organisms → cellular organisms → Bacteria	5729	Open in IMG/M
3300027969\|Ga0209191_1000637	Not Available	26335	Open in IMG/M
3300027969\|Ga0209191_1023836	All Organisms → cellular organisms → Bacteria	3002	Open in IMG/M
3300027969\|Ga0209191_1069779	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300027972\|Ga0209079_10306582	All Organisms → Viruses	538	Open in IMG/M
3300031707\|Ga0315291_10031106	All Organisms → cellular organisms → Bacteria	6222	Open in IMG/M
3300031707\|Ga0315291_10205101	All Organisms → cellular organisms → Bacteria	2006	Open in IMG/M
3300031707\|Ga0315291_10943172	Not Available	733	Open in IMG/M
3300031746\|Ga0315293_10429800	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1033	Open in IMG/M
3300031758\|Ga0315907_10053328	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	3550	Open in IMG/M
3300031758\|Ga0315907_11067025	Not Available	577	Open in IMG/M
3300031758\|Ga0315907_11080425	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300031772\|Ga0315288_11496787	Not Available	558	Open in IMG/M
3300031787\|Ga0315900_10779875	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300031885\|Ga0315285_10087503	All Organisms → cellular organisms → Bacteria	2760	Open in IMG/M
3300031952\|Ga0315294_11447199	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	541	Open in IMG/M
3300031999\|Ga0315274_10005082	Not Available	19286	Open in IMG/M
3300032046\|Ga0315289_10308722	All Organisms → cellular organisms → Bacteria	1633	Open in IMG/M
3300032046\|Ga0315289_10910164	Not Available	754	Open in IMG/M
3300032053\|Ga0315284_11258787	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300033995\|Ga0335003_0027366	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3078	Open in IMG/M
3300033995\|Ga0335003_0087987	Not Available	1622	Open in IMG/M
3300034022\|Ga0335005_0010570	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6650	Open in IMG/M
3300034022\|Ga0335005_0058710	All Organisms → cellular organisms → Bacteria	2577	Open in IMG/M
3300034050\|Ga0335023_0020436	All Organisms → cellular organisms → Bacteria	3884	Open in IMG/M
3300034068\|Ga0334990_0001230	Not Available	14993	Open in IMG/M
3300034200\|Ga0335065_0065617	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2506	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	79.84%
Marine	Environmental → Aquatic → Marine	19.38%
Unclassified	Environmental → Aquatic → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	35.66%
Lentic	Environmental → Aquatic → Freshwater → Lentic	34.88%
Unclassified	Environmental → Aquatic → Marine → Unclassified	8.53%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.43%
Coastal	Environmental → Aquatic → Marine → Coastal	4.65%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.10%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.10%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.10%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.78%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	34.11%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	27.13%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	8.53%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	8.53%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.43%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.65%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.10%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.10%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	3.10%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.78%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	27.13%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	19.38%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	8.53%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.43%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.65%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	4.65%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.65%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	4.65%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.10%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	3.10%
Marine	Environmental → Aquatic → Marine → Wetlands → Sediment → Marine	3.10%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	3.88%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.55%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.55%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.78%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.78%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.78%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.78%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.78%
Marine	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000124	Marine microbial communities from chronically polluted sediments in the Baltic Sea - site KBA sample SWE 12_21m	Environmental	Open in IMG/M
3300000126	Marine microbial communities from chronically polluted sediments in the Baltic Sea - site KBB sample SWE 26_20.5m	Environmental	Open in IMG/M
3300000241	Marine microbial communities from chronically polluted sediments in the Baltic Sea - site KBB sample SWE 21_20.5m	Environmental	Open in IMG/M
3300002131	Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t2BS1 (111f)	Environmental	Open in IMG/M
3300002447	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300004096	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)	Environmental	Open in IMG/M
3300004124	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (version 2)	Environmental	Open in IMG/M
3300004126	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (version 2)	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300012663	Freshwater microbial communities from Indian River, Ontario, Canada - S50	Environmental	Open in IMG/M
3300012778	Freshwater microbial communities from Lake Croche, Canada - C_130208_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300015050	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019096	Metatranscriptome of marine microbial communities from Baltic Sea - GS676_0p1	Environmental	Open in IMG/M
3300019122	Metatranscriptome of marine microbial communities from Baltic Sea - GS677_0p1	Environmental	Open in IMG/M
3300019781	Freshwater viral communities from Lake Michigan, USA - Sp13.ND.MM15.S.D	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020548	Freshwater microbial communities from Lake Mendota, WI - 13JUL2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300025645	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)	Environmental	Open in IMG/M
3300025652	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)	Environmental	Open in IMG/M
3300027320	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)	Environmental	Open in IMG/M
3300027621	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027746	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027756	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300027836	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027972	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental	Open in IMG/M
3300034068	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031	Environmental	Open in IMG/M
3300034200	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BS_KBA_SWE12_21mDRAFT_100019055	3300000124	Marine	MDQGSIRLYILNALTIYLSFTKLETTLKILLLLISIVYTSMKIYDWILIRLNKKDGNNSKETLQD*
BS_KBA_SWE12_21mDRAFT_100064783	3300000124	Marine	MDQCSLRVYSLNAITLIMSLTNLEASLKILLLIISIVYTSMKIYDWLIIKLNKKNADNSKEITQD*
BS_KBB_SWE26_205mDRAFT_10320722	3300000126	Marine	MDQGSIRLYCLNALTIYLSFTNLETTLKILLLVISIVYTSMKIYDWVLIKLNKKHADNSKETTQD*
BS_KBA_SWE21_205mDRAFT_101256181	3300000241	Marine	VYSLNAITLIMSLTNLEASLKILLLIISIVYTSMKIYDWLIIKLNKKNADNSKEITQD*
M2t2BS1_10440483	3300002131	Marine	MDQGSTRVYLLNTLTLIISLTNLEAALKILLLVISIIFTGMKIYDWIIGKIKKKDVING*
JGI24768J34885_1000086310	3300002447	Freshwater And Sediment	MDQGSVRLYILNALTIYLSFTKLETTLKILLLLISIVYTSMKIYDWILIRLNKKDGNNSKETLQD*
JGI25908J49247_100000985	3300003277	Freshwater Lake	MDQCSIRLYALNALTLIISFTNLEIVLKIILLIMSITYTCMKIYDWINIKLKNKHENNNKETL*
JGI25908J49247_100071843	3300003277	Freshwater Lake	MDQCSIRVYTLNALTLIISLTNLEASLKILLLIISIVYTSMKIYDWLIFKIKGNKNADNNKEITQD*
JGI25908J49247_100132993	3300003277	Freshwater Lake	MDQCSLRVYGLNTLTLIMSLTNLEESLKILLLIISIVYTSMKIFDWLIIKIKGNKNADNSKETTQD*
JGI25908J49247_100587532	3300003277	Freshwater Lake	MLNALTLIMSFTNLEIILKIMLLIISIVYTSMKIYDWVNIKLKNKNDYSDKEII*
JGI25909J50240_10421021	3300003393	Freshwater Lake	QCSIRLYALNALTLIISFTNLEIVLKIILLIMSITYTCMKIYDWINIKLKNKHENNNKETL*
JGI25920J50251_100120684	3300003404	Freshwater Lake	MDQCSLRVYSLNALTLIISLTNLEASLKILLLIISIVYTSMKIHDWVINKKLGKTDKNND
JGI25920J50251_100965192	3300003404	Freshwater Lake	MDQCSIRVYTLNALTLIISLTNLEASLKILLLIISIVYTSMKIYDWLIFKIKGKNADNSKEITQD*
Ga0066177_101858762	3300004096	Freshwater Lake	MDQCSLRVYGLNTLTLIMSLTNLEASLKILLLIISIVYTSMKIFDWLIIKIKGNKNADNSKETT*
Ga0066178_102291561	3300004124	Freshwater Lake	MDQCSLRVYALNSVTLIMSLTNLEASLKILLLIISIVYTSMKIYDWLIFKIKGKNADNNKEITQD*
Ga0066179_101300142	3300004126	Freshwater Lake	MDQCSLRVYGLNTLTLIMSLTNLEASLKILLLIISIVYTSMKIFDWLIIKIKGNKNADNGKETTQD*
Ga0069718_157098261	3300004481	Sediment	MDQCSIRVYSLNALTLIMSLTNLEASLKILLLLISIIYTSMKISDWVLIKIKGKNADNSKETPQD*
Ga0070374_101075763	3300005517	Freshwater Lake	MDQCSIRVYTLNAITLIISLTNLEASLKILLLIISIVYTSMKIYDWLIFKIKGNKNADNNKEITQD*
Ga0049081_100336194	3300005581	Freshwater Lentic	MDQCSIRVYMLNALTLIMSFTNLEIILKIILLIISIIYTSMKIYDWVNIKLKNKNDYIDKETL*
Ga0049081_100916852	3300005581	Freshwater Lentic	MDQCSVRVYMLNALTLIMSFTNLEVILKIILLIISIMYTSMKIYDWINFKLKNKNDYRDKETV*
Ga0049080_102048282	3300005582	Freshwater Lentic	MEQTSARVYILNALTLIMSFTNLEVILKIVLLIISIVYTSMKIYDWINIKLKNRYDYIDKETL*
Ga0070744_1000173711	3300006484	Estuarine	MDQGSIRLYILNALTIYLSFTNLEGTLRILLLCISIAYTTMKIVDWVTNKIKNKNGNNDKEIVQD*
Ga0070744_100873114	3300006484	Estuarine	MDQCSIRVYALNTITLIMSLTNLEAKLKILLLIISIVYTSMKIYDWLIIKLKGKNADNSKEITQD*
Ga0070749_102862711	3300006802	Aqueous	MDQPSLRVYLLNTLTLMMSFTNLEAKLKIMLLLISIIYTSMKI
Ga0075467_106478932	3300006803	Aqueous	MDNVSLRVYTLNAVKLIMSTTHLEATLKIMLLIISIVFTSMKIYDWLKLNIKKKDANNN*
Ga0070748_10554183	3300006920	Aqueous	MDNVSLRVYTLNAVTLIISTTHLEATLKIILLIISIVFTSMKIYDWLKINIKKKDADNN*
Ga0070747_10240004	3300007276	Aqueous	MDNVSLRVYTLNAATLIISATQLEATLKIMLLIISIVFTSMKIYDWLKLNIKKKDANND*
Ga0102828_10914153	3300007559	Estuarine	MDQCSIRVYALNTITLIMSLTNLEAKLKILLLIISIVYTSMKIYDWLIIKLNKKN
Ga0114876_100445110	3300008448	Freshwater Lake	MDQCSMRVYALNTLTLIMSFTNLEDKLKILLLIISIIYTSMKIYDWSINKIKGNKNADNSKETTQD*
Ga0102829_11648463	3300009026	Estuarine	MDQCSIRVYTLNAITLIISLTNLEASLKILLLIISIVYTSMKIYDWLIFKIKGKIDKDNDQNN*
Ga0105103_106328793	3300009085	Freshwater Sediment	MDQGSIRLYILNALTIYLSFTNLESTLKILLLCISIVYTSMKIVDWIILKIKSKNEIEQ*
Ga0114977_100513464	3300009158	Freshwater Lake	MDQCSLRVYALNTLTLIMSFTNLEASLKILLLAISIIYTAMKIYDWVLIKIKGKDADNNKETLQD*
Ga0114977_103286143	3300009158	Freshwater Lake	MDQCSIRVYSLNALTLLISLTNLEASLKILLLIISIVYTSMKISDWLLIKIKGNKNADNDKEITQD*
Ga0114978_107165193	3300009159	Freshwater Lake	MDQCSIRVYSLNALTLIMSLTNLEASLKILLLLISIIYTSMKISDWVLIKIKGKNADNSKETTQD*
Ga0114975_101191432	3300009164	Freshwater Lake	MMDQYSLRVYALNTLTFIMSFTNLEANLKILLLAISIIYTSMKIYDWLLIKIKGKNADNNKETLQD*
Ga0114979_101272364	3300009180	Freshwater Lake	MDQCSIRVYSLNALTLIMSFTNLEASLKILLLLISIIYTSMKISDWVLIKIKGNKNADNGKETTQD*
Ga0114974_105686563	3300009183	Freshwater Lake	MMDQCSLRVYALNTLTLIMSFTNLEASLKILLLAISIIYTAMKIYDWVLIKTKGKDADNNKETLQ
Ga0114971_100051215	3300009185	Freshwater Lake	MIDQCSLRVYALNTLTLIMSFTSLEASLKILLLAISIIYTSMKIYDWLLIKIKGKDADNNKETLQD*
Ga0114958_1000788013	3300009684	Freshwater Lake	MIDQCSTRVYALNTLTLMISFTNLEAGLKILLLLISIVYTSMKISDWVLTKIKNKNANNDKEITQD*
Ga0114967_1000328716	3300010160	Freshwater Lake	MIDQCSLRVYALNTLTLIMSFTNLEASLKILLLAISIIYTSMKIYDWLLIKIKGKDADNNKETLQD*
Ga0114967_103535931	3300010160	Freshwater Lake	NILTIMVSLTNIESELKILLLLISIIYTSMKIYDWVLIKTKEKNADNSKETLQD*
Ga0157203_10060552	3300012663	Freshwater	MDHISIRVLSLNAATLMISLTNLEATLKILLLIISIAYTSMKIYDWVMYRIKGKKSNEE*
Ga0138269_13707412	3300012778	Freshwater Lake	MIDQCSTRVYALNTLTLMISFTNLEAGLKILLLLISIVYTSMKISDWVITKIKNKNANNDKEITQD*
Ga0181338_10324974	3300015050	Freshwater Lake	MDQCSIRVYTLNAITLIVSLTNLEATLKILLLIISIVYTSMKIYDWLIFKIKGNKNADNNKEITQD*
Ga0181350_10092003	3300017716	Freshwater Lake	MDQCSIRVYTLNAITLIVSLTNLEATLKILLLIISIVYTSMKIYDWLIIKLKGNKNADNGKEITQD
Ga0181347_10014036	3300017722	Freshwater Lake	MDQCSIRVYTLNAITLIISLTNLEASLKILLLIISIVYTSMKIYDWLIFKIKKNKNADNNKEITQD
Ga0181344_10013117	3300017754	Freshwater Lake	MDQCSIRVYTLNILTLMISFTNLEAILKVLLLVISIIYTSMKIFDWVLNKREKKVPDQEE
Ga0181357_10504043	3300017777	Freshwater Lake	MDQCSLRVYTLNAITLIVSLTNLEATLKILLLIISIVYTSMKIYDWLIFKIKKNKNADNN
Ga0181357_11789422	3300017777	Freshwater Lake	MEQTSIRVYVLNALTLIMSFTNLEVILKIILLIISIVYTSMKIYDWINIKLKDRHDYIDKENL
Ga0181346_10493292	3300017780	Freshwater Lake	MEQTSIRVYVLNALTLIMSFTNLEVILKIILLIISIVYTSMKIYDWINIKLKDRHDCIDKENL
Ga0181346_10548502	3300017780	Freshwater Lake	MDQCSIRVYTLNAITLIVSLTNLEATLKILLLIISIVYTSMKIYDWLIIKLKGNKNADNSKEITQD
Ga0181348_10094183	3300017784	Freshwater Lake	MEQTSIRVYILNALTLIMSFTNLEVILKIILLIISIVYTSMKIYDWINIKLKNRYDHNDKETI
Ga0181355_11002423	3300017785	Freshwater Lake	MDQCSLRVYALNSVTLIMSLTNLEASLKILLLIISIVYTSMKIHDWVINKKLGKTD
Ga0188835_10011235	3300019096	Freshwater Lake	MDQGSTRVYLLNTLTLIISLTNLEAALKILLLVISIIFTGMKIYDWIIGKIKKKDVING
Ga0188839_10095203	3300019122	Freshwater Lake	MDQCSLRVYSLNAITLIMSLTNLEAKLKILLLLISIIYTSMKIYDWVLNKRKREKPEQE
Ga0181360_1219552	3300019781	Freshwater Lake	MDQCSLRVYGLNTLTLIMSLTNLEASLKILLLIISIVYTSMKIFDWLIIKIKGNKNADNSKETTQD
Ga0181359_10041488	3300019784	Freshwater Lake	MDQCSIRVYTLNALTLIISLTNLEASLKILLLIISIVYTSMKIYDWLIFKIKGKNADNSKEITQD
Ga0181359_10088684	3300019784	Freshwater Lake	MDQCSIRVYTLNAITLIISLTNLEASLKILLLIISIVYTSMKIYDWLIFKIKGNKNADNNKEITQD
Ga0211731_114904683	3300020205	Freshwater	MDQGSIRLYILNALTIYLSFTNLETTLKILLLLISIVYTSMKIYDWLLIKLNKKDGNNSKETIQD
Ga0211731_116433587	3300020205	Freshwater	MDQCSLRVYSLNAITLIMSLTNLEAKLKILLLLISIIYTSMKIYDWVLNKRKGKTSEQE
Ga0208856_10040425	3300020548	Freshwater	MDQPSLRVYLLNTLTLMMSFTNLEAKLKIMLLLISIIYTSMKIWDWVQIRINGKNEDNSKKNTQD
Ga0222714_101251723	3300021961	Estuarine Water	MDQGSIKLYCLNALTIYLSFTNLEAKLKIVLLLISIIYTSMKIFDWVSNKRKGKTPEQEE
Ga0222713_1000411822	3300021962	Estuarine Water	MDQCSLRVYSLNALTLIMSLTNLEDTLKILLLLISIIYTSMKIYDWLIIKIKGKNADNNKETLQD
Ga0222713_106091592	3300021962	Estuarine Water	MDQGSIKLYCLNALTIYLSFTNLEAKLKIILLLISIIYTSMKIYDWVLIRLKKQNEDNSKENTKD
Ga0222712_100007749	3300021963	Estuarine Water	MIDHQPSWRVYFLNALTLMMSFTDLEAKLKVMLLLISIIYTSMKIWDWVQIRINRKDEDNSKKTPQD
Ga0222712_103664822	3300021963	Estuarine Water	MDQCSIRVYSLNALTLIMSFTNLEDTLKILLLIISIIYTSMKIYDWLIIKIKGKNADNSKETLQD
Ga0181351_10549821	3300022407	Freshwater Lake	MDQCSLRVYGLNTLTLIMSLTNLEESLKILLLIISIVYTSMKIFDWLIIKIKGNKNADNSKETTQD
Ga0181351_10572463	3300022407	Freshwater Lake	MDQCSLRVYALNSVTLIMSLTNLEASLKILLLIISIVYTSMKIYDWLIFKIKGKNADNNKEITQD
Ga0181351_11806933	3300022407	Freshwater Lake	MDQCSLRVYGLNTLTLIMSLTNLEASLKILLLIISIVYTSMKIFDWLIIKIKGNKNADNGKETTQD
Ga0244775_100173703	3300024346	Estuarine	MDQGSIRLYILNALTIYLSFTNLEGTLRILLLCISIAYTTMKIVDWVTNKIKNKNGNNDKEIVQD
Ga0244775_103553853	3300024346	Estuarine	MDQCSLRVYALNSVTLIMSLTNLEASLKILLLIISIVYTSMKIYDWLIIKLKGKNADNSKEITQD
Ga0244775_107043844	3300024346	Estuarine	MDQCSIRVYALNTITLIMSLTNLEAKLKILLLIISIVYTSMKIYDWLIIKLNKKNADNSKEITQ
Ga0244775_113773731	3300024346	Estuarine	KIMDQNSIKIYILNALTLVMSFTNLEITLKIVLLIISIIYTSMKIYDWITNKIKGKDANNYKEDL
Ga0244776_103044641	3300024348	Estuarine	MDQCSIRVYALNTITLIMSLTNLEASLKILLLIISITYTSMKIYDWLIIKIKGN
Ga0208643_11276432	3300025645	Aqueous	MDNVSLRVYTLNAATLIISATQLEATLKIILLIISIVFTSMKIYDWLKINIKKKDADNN
Ga0208134_10419984	3300025652	Aqueous	MDNVSLRVYTLNAATLIISATQLEATLKIMLLIISIVFTSMKIYDWLKLNIKKKDANND
Ga0208923_10007594	3300027320	Estuarine	MDQCSIRVYALNTITLIMSLTNLEAKLKILLLIISIVYTSMKIYDWLIIKLNKKNADNSKEITQD
Ga0208951_11571983	3300027621	Freshwater Lentic	MDQCSIRVYTLNAITLIISLTNLEASLKILLLIISIVYTSMKIYDWLIFKIKGNKNADNNKEIT
Ga0208975_10069284	3300027659	Freshwater Lentic	MDQCSIRVYMLNALTLIMSFTNLEIILKIILLIISIIYTSMKIYDWVNIKLKNKNDYIDKETL
Ga0208975_10140124	3300027659	Freshwater Lentic	MDQCSVRVYMLNALTLIMSFTNLEVILKIILLIISIMYTSMKIYDWINFKLKNKNDYRDKETV
Ga0209704_10678572	3300027693	Freshwater Sediment	MDQGSIRLYILNALTIYLSFTRLETTLKILLLLISIVYTSMKIYDWILIRLNKKDGNNSKETLQD
Ga0209492_10059604	3300027721	Freshwater Sediment	MDQGSVRLYILNALTIYLSFTKLETTLKILLLLISIVYTSMKIYDWVLIRLNKKDGNNGKETLQDX
Ga0209492_10622181	3300027721	Freshwater Sediment	RLYILNALTIYLSFTRLETTLKILLLLISIVYTSMKIYDWILIRLNKKDGNNSKETLQD
Ga0209492_11509551	3300027721	Freshwater Sediment	MDQGSMRLYILNALTIYLSFTRLETILKILLLLISIVYTSMKIYDWILIRLNKKDGNNSKETLQD
Ga0209442_11960003	3300027732	Freshwater Lake	MDQCSIRLYALNALTLIISFTNLEIVLKIILLIMSITYTCMKIYDWINIKLKNKHENNNKETL
Ga0209297_13615881	3300027733	Freshwater Lake	MDQCSLRVYALNTLTLIMSFTNLEASLKILLLAISIIYTAMKIYDWVLIKIKG
Ga0209087_10030033	3300027734	Freshwater Lake	MDQCSLRVYALNTLTLIMSFTNLEASLKILLLAISIIYTAMKIYDWVLIKIKGKDADNNKETLQD
Ga0209190_10112979	3300027736	Freshwater Lake	MDQPSLRVYLLNTLTLMMSFTNLEAKLKVMLLLISIIYTSMKIWDWVQIRINKKDEDNSKKNTQD
Ga0209597_10033726	3300027746	Freshwater Lake	MIDQCSLRVYALNTLTLIMSFTNLEASLKILLLAISIIYTSMKIYDWLLIKIKGKDADNNKETLQD
Ga0209596_10001789	3300027754	Freshwater Lake	MDNCSLRVYSLNILTIMVSLTNIESELKILLLLISIIYTSMKIYDWVLIKTKRKNADNSKETLQD
Ga0209444_101708942	3300027756	Freshwater Lake	MDQCSIRVYTLNAITLIISLTNLEASLKILLLIISIVYTSMKIYDWLIFKIKGKNADNSKEITQD
Ga0209296_100022417	3300027759	Freshwater Lake	MDQCSIRVYMLNALTLIMSFTNLEVILKIMLLIISIVYTSMKIYDWINIKLNNKHDYNDKETL
Ga0209296_10341643	3300027759	Freshwater Lake	MDQCSIRVYSLNALTLIMSLTNLEASLKILLLLISIIYTSMKISDWVLIKIKGKNADNSKETTQD
Ga0209088_100029654	3300027763	Freshwater Lake	MDQCSIRVYSLNALTLIMSFTNLEASLKILLLLISIIYTSMKISDWVLIKIKGNKNADNGKETTQD
Ga0209088_101018141	3300027763	Freshwater Lake	MDQCSIRVYSLNALTLIMSFTNLEASLKILLLLISIIYTSMKISDWVLIKIKGNKN
Ga0209086_100093625	3300027770	Freshwater Lake	MDQCSIRVYSLNALTLLISLTNLEASLKILLLIISITYTSMKIYDWLIIKLKGNKNADNNKEITQD
Ga0209500_104351893	3300027782	Freshwater Lake	MDQCSIRVYSLNALTLIMSLTNLEASLKILLLLISIIYTSMKISDWVLIKIKGKNADNSKETTQDXHNYNR
Ga0209107_1000192313	3300027797	Freshwater And Sediment	MDQCSIRVYTLNAITLIMSLTNLEASLKILLLIISIVYTSMKIYDWLIFKIKGKIDKDND
Ga0209353_100064717	3300027798	Freshwater Lake	MDQCSIRVYTLNALTLIISLTNLEASLKILLLIISIVYTSMKIYDWLIFKIKGKIDKDNDQNN
Ga0209353_100885981	3300027798	Freshwater Lake	ALTLIISLTNLEASLKILLLIISIVYTSMKIYDWLIFKIKGNKNADNNKEITQD
Ga0209354_100559121	3300027808	Freshwater Lake	ITLIISLTNLEASLKILLLIISIVYTSMKIYDWLIFKIKGNKNADNNKEITQD
Ga0209230_100685812	3300027836	Freshwater And Sediment	MDQPSIRVYTLNAITLIMSLTNLEDVLKILLLLISIIYTSMKIYDWLIIKLKGKDANNDKEITQD
Ga0209550_100208093	3300027892	Freshwater Lake	MDQCSLRVYGLNTLTLIMSLTNLEASLKILLLIISIVYTSMKIFDWLIIKIKGNKNADNSKETT
Ga0209191_100063727	3300027969	Freshwater Lake	MDQCSIRVYSLNAITLIMSLTNLEASLKILLLLISIIYTSMKISDWVLIKIKGKNADNSKETLQD
Ga0209191_10238364	3300027969	Freshwater Lake	MDQCSIRVYSLNALTLLISLTNLEASLKILLLIISIVYTSMKISDWLLIKIKGNKNADNDKEITQD
Ga0209191_10697793	3300027969	Freshwater Lake	MMDQYSLRVYALNTLTFIMSFTNLEANLKILLLAISIIYTSMKIYDWLLIKIKGKNADNNKETLQD
Ga0209079_103065821	3300027972	Freshwater Sediment	MDQGSIRLYILNALTIYLSFTRLETTLKILLLLISIVYTSMKIYDWILIRLNKKDGNNSK
Ga0315291_100311068	3300031707	Sediment	MDQCSIRVYMLNALTLMMSFTNLEIILKIMLLIISIVYTSMKIYDWINIKLNNKHDYNDKETL
Ga0315291_102051012	3300031707	Sediment	MDQCSLRVYSLNALTLLISLTNLEASLKILLLIISIVYTSMKIYDWLIIKLKGNKNADNSKEITQD
Ga0315291_109431721	3300031707	Sediment	MDQCSIRVYILNALTLVMSFTNLEIVLKIILLIISIVYTSMKIYDWINIKLKNKNDYNDKETI
Ga0315293_104298003	3300031746	Sediment	MIDQCSLRVYALNTLTLIMSFTNLEASLKILLLAISIIYTSMKIYDWVLIKIKGKDADNNKEALQD
Ga0315907_100533285	3300031758	Freshwater	MDQPSLRVYLLNTLTLMMSFTNLEAKLKIMLLLISIIYTSMKIWDWVQIRINGKDEDNSKKNTQD
Ga0315907_110670251	3300031758	Freshwater	MDQCSIRVYSLNALTLIMSFTNLEDTLKILLLIISIIYTSMKIYDWLIIKIKGNKNADNSKETLQD
Ga0315907_110804252	3300031758	Freshwater	MDQGSLRVYSLNALTLIMSFTNLEDTLKILLLIISIIYTSMKIYDWLTIKIKGRNADNSKETLQD
Ga0315288_114967873	3300031772	Sediment	MDQCSIRVYTLNAITLIMSLTNLEASLKILLLIISITYTSMKIYDWLIIKIKGNKNADNNKEITQD
Ga0315900_107798752	3300031787	Freshwater	MDQPSLRVYLLNTLTLMMSFTNLEAKLKIMLLLISIIYTSMKIWDWVQTRINGKNEDNSKKNTQD
Ga0315285_100875035	3300031885	Sediment	MDQCSIRVYSLNAITLIISLTNLEATLKILLLIISITYTSMKIYDWLIIKIKGNKNADNNKEITQD
Ga0315294_114471992	3300031952	Sediment	GYYKQTKKIMDQCSIRVYALNATTLIMSLTNLEAGLKIALLVISIVYTSMKITDWIFSKIKGKSEKESNE
Ga0315274_1000508225	3300031999	Sediment	MDQCSIRVYTLNALTLIISFTNLEATLKILLLIISITYTSMKIYDWLIIKIKGNKNADNNKEITQD
Ga0315289_103087224	3300032046	Sediment	MDNCSLRVYSLNILTIMVSLTNLESELKILLLLISIIYTSMKIYDWVVIKTNKKNADNSKETLQD
Ga0315289_109101642	3300032046	Sediment	MDQCSIRVYTLNAITLIMSLTNLEASLKILLLIISIVYTSMKIYDWLIIKLKGNKNADNNKEITQD
Ga0315284_112587873	3300032053	Sediment	MDQCSLRVYTLNALTLIMSLTNLEASLKILLLLISIIYTSMKIYDWLIIKLKGNKNADNNKEITQD
Ga0335003_0027366_1679_1870	3300033995	Freshwater	MEQGSIRVYMLNALTLIMSFTNLEVILKIVLLIISIVYTSMKIYDWINIKLKNRYDYNDKEII
Ga0335003_0087987_218_403	3300033995	Freshwater	MDQGSMRLYALNVLTIYLSFTNLETILKILLLLISIVYTSMKIYDWLVFKLKGKIPEQEE
Ga0335005_0010570_909_1106	3300034022	Freshwater	MDQGSIRLYILNALTIYLSFTKLETTLKILLLLISIVYTGMKIYDWILIRLNKKDGNNSKETLQD
Ga0335005_0058710_544_744	3300034022	Freshwater	MMDQGSIRLYVLNALTIYLSFTNLETTLKILLLLISIVYTSMKIYDWVLIKLNKKDANNSKETLQD
Ga0335023_0020436_1956_2153	3300034050	Freshwater	MDQGSVRLYILNALTIYLSFTKLETTLKILLLLISIVYTSMKIYDWVLIRLNKKDGNNGKETLQD
Ga0334990_0001230_10607_10804	3300034068	Freshwater	MDQCSIRVYTLNAITLIMSLTNLEASLKILLLIISIVYTSMKIYDWLIFKIKGKNADNSKETLQD
Ga0335065_0065617_2_184	3300034200	Freshwater	MDQPSLRVYLLNTLTLMMSFTNLEAKLKIMLLLISIIYTSMKIWDWVQIRINGKDEDNSK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063709

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences