Metagenome / Metatranscriptome Family F063716

Basic Information
Family ID	F063716
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	44 residues
Representative Sequence	MKSNLRVKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQPG
Number of Associated Samples	111
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	16.41 %
% of genes near scaffold ends (potentially truncated)	68.99 %
% of genes from short scaffolds (< 2000 bps)	98.45 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Most Common Taxonomy
Group	Unclassified (93.798 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.581 % of family members)
Environment Ontology (ENVO)	Unclassified (32.558 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.062 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.99% β-sheet: 0.00% Coil/Unstructured: 69.01%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00291	PALP	0.78

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.80 %
All Organisms	root	All Organisms	6.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.80 %
cellular organisms	root	All Organisms → cellular organisms	6.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.43 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.80 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	4.65 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.80 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4.65 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.80 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	4.65 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.80 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	4.65 %
Basidiomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota	0.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.80 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	4.65 %
Agaricomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina	0.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.80 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	4.65 %
Agaricomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	0.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.80 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	4.65 %
Agaricomycetes incertae sedis	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis	0.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.80 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	4.65 %
Polyporales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis → Polyporales	0.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.80 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	4.65 %
Fibroporiaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis → Polyporales → Fibroporiaceae	0.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.80 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	4.65 %
Fibroporia	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis → Polyporales → Fibroporiaceae → Fibroporia	0.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.80 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	4.65 %
Fibroporia radiculosa	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis → Polyporales → Fibroporiaceae → Fibroporia → Fibroporia radiculosa	0.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G14TP7Y01CYZKX	Not Available	611	Open in IMG/M
3300000334\|thermBogB4DRAFT_100089	Not Available	1244	Open in IMG/M
3300000339\|actLayA2DRAFT_100618	Not Available	687	Open in IMG/M
3300002654\|Ga0005464J37254_101409	Not Available	697	Open in IMG/M
3300004100\|Ga0058904_1026621	Not Available	739	Open in IMG/M
3300004103\|Ga0058903_1031463	Not Available	766	Open in IMG/M
3300004116\|Ga0058885_1000611	Not Available	572	Open in IMG/M
3300004120\|Ga0058901_1013808	Not Available	652	Open in IMG/M
3300004132\|Ga0058902_1020770	Not Available	742	Open in IMG/M
3300004133\|Ga0058892_1007843	Not Available	736	Open in IMG/M
3300004138\|Ga0058905_1014029	Not Available	610	Open in IMG/M
3300004140\|Ga0058894_1005622	Not Available	605	Open in IMG/M
3300004470\|Ga0068967_1021657	Not Available	519	Open in IMG/M
3300004473\|Ga0068919_1027683	Not Available	640	Open in IMG/M
3300004474\|Ga0068968_1010138	Not Available	688	Open in IMG/M
3300004577\|Ga0066502_159362	Not Available	632	Open in IMG/M
3300004600\|Ga0068964_1000035	Not Available	561	Open in IMG/M
3300004611\|Ga0068925_1022284	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	545	Open in IMG/M
3300004785\|Ga0058858_1016433	Not Available	593	Open in IMG/M
3300004801\|Ga0058860_10194495	Not Available	624	Open in IMG/M
3300005640\|Ga0075035_1084635	Not Available	516	Open in IMG/M
3300005640\|Ga0075035_1096048	Not Available	657	Open in IMG/M
3300005640\|Ga0075035_1103001	Not Available	552	Open in IMG/M
3300005640\|Ga0075035_1121655	Not Available	607	Open in IMG/M
3300005644\|Ga0075036_1058655	Not Available	514	Open in IMG/M
3300005644\|Ga0075036_1148505	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	580	Open in IMG/M
3300005650\|Ga0075038_10187710	Not Available	600	Open in IMG/M
3300006052\|Ga0075029_100332527	Not Available	976	Open in IMG/M
3300006102\|Ga0075015_100926318	Not Available	530	Open in IMG/M
3300006423\|Ga0075039_1127395	Not Available	549	Open in IMG/M
3300006423\|Ga0075039_1133830	Not Available	727	Open in IMG/M
3300006426\|Ga0075037_1109861	Not Available	743	Open in IMG/M
3300006861\|Ga0063777_1020782	Not Available	553	Open in IMG/M
3300006937\|Ga0081243_1415744	Not Available	623	Open in IMG/M
3300009583\|Ga0115598_1053434	Not Available	557	Open in IMG/M
3300010066\|Ga0127427_100216	Not Available	613	Open in IMG/M
3300010092\|Ga0127468_1114270	Not Available	584	Open in IMG/M
3300010120\|Ga0127451_1146558	Not Available	552	Open in IMG/M
3300010854\|Ga0126360_1015337	Not Available	813	Open in IMG/M
3300010856\|Ga0126358_1233435	Not Available	638	Open in IMG/M
3300010857\|Ga0126354_1018013	Not Available	611	Open in IMG/M
3300010862\|Ga0126348_1124910	Not Available	531	Open in IMG/M
3300010869\|Ga0126359_1529780	Not Available	506	Open in IMG/M
3300010869\|Ga0126359_1582744	Not Available	543	Open in IMG/M
3300011036\|Ga0138590_137241	Not Available	505	Open in IMG/M
3300011048\|Ga0138556_118915	Not Available	633	Open in IMG/M
3300011066\|Ga0138524_1127899	Not Available	546	Open in IMG/M
3300012378\|Ga0134025_1074179	Not Available	503	Open in IMG/M
3300012405\|Ga0134041_1243586	Not Available	515	Open in IMG/M
3300012582\|Ga0137358_10677434	Not Available	690	Open in IMG/M
3300014838\|Ga0182030_10109411	Not Available	3752	Open in IMG/M
3300016700\|Ga0181513_1333851	Not Available	579	Open in IMG/M
3300016701\|Ga0181509_1213506	Not Available	560	Open in IMG/M
3300016750\|Ga0181505_10401378	Not Available	563	Open in IMG/M
3300019158\|Ga0184580_125462	Not Available	550	Open in IMG/M
3300019180\|Ga0184578_112663	Not Available	580	Open in IMG/M
3300019207\|Ga0180034_1085890	Not Available	620	Open in IMG/M
3300019242\|Ga0181502_1105872	Not Available	541	Open in IMG/M
3300019268\|Ga0181514_1303236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	602	Open in IMG/M
3300019270\|Ga0181512_1440636	Not Available	596	Open in IMG/M
3300021139\|Ga0214166_1018807	Not Available	1776	Open in IMG/M
3300021286\|Ga0179583_1017558	Not Available	607	Open in IMG/M
3300021307\|Ga0179585_1002303	Not Available	582	Open in IMG/M
3300021855\|Ga0213854_1196043	Not Available	608	Open in IMG/M
3300021855\|Ga0213854_1280434	Not Available	600	Open in IMG/M
3300021858\|Ga0213852_1485207	Not Available	577	Open in IMG/M
3300021909\|Ga0213846_1105901	Not Available	664	Open in IMG/M
3300021909\|Ga0213846_1121133	Not Available	704	Open in IMG/M
3300021938\|Ga0213847_1169185	Not Available	626	Open in IMG/M
3300022498\|Ga0242644_1028239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	592	Open in IMG/M
3300022498\|Ga0242644_1043540	Not Available	515	Open in IMG/M
3300022501\|Ga0242645_1009060	Not Available	765	Open in IMG/M
3300022501\|Ga0242645_1022636	Not Available	565	Open in IMG/M
3300022525\|Ga0242656_1077980	Not Available	618	Open in IMG/M
3300022531\|Ga0242660_1156081	Not Available	601	Open in IMG/M
3300022533\|Ga0242662_10352494	Not Available	502	Open in IMG/M
3300022712\|Ga0242653_1105285	Not Available	520	Open in IMG/M
3300022716\|Ga0242673_1059069	Not Available	665	Open in IMG/M
3300022718\|Ga0242675_1105268	Not Available	548	Open in IMG/M
3300022720\|Ga0242672_1093056	Not Available	580	Open in IMG/M
3300023311\|Ga0256681_11802939	Not Available	626	Open in IMG/M
3300024246\|Ga0247680_1050229	Not Available	606	Open in IMG/M
3300026557\|Ga0179587_10966793	Not Available	561	Open in IMG/M
3300030049\|Ga0302191_10326500	Not Available	562	Open in IMG/M
3300030507\|Ga0302192_10382662	Not Available	577	Open in IMG/M
3300030526\|Ga0210267_1134356	Not Available	580	Open in IMG/M
3300030528\|Ga0210277_10643673	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	575	Open in IMG/M
3300030529\|Ga0210284_1903107	Not Available	553	Open in IMG/M
3300030530\|Ga0210264_1090478	Not Available	562	Open in IMG/M
3300030549\|Ga0210257_10637313	Not Available	649	Open in IMG/M
3300030549\|Ga0210257_10785569	Not Available	620	Open in IMG/M
3300030575\|Ga0210288_1179444	Not Available	583	Open in IMG/M
3300030586\|Ga0265393_1122903	Not Available	616	Open in IMG/M
3300030586\|Ga0265393_1194428	Not Available	532	Open in IMG/M
3300030594\|Ga0210280_1094394	Not Available	635	Open in IMG/M
3300030594\|Ga0210280_1109950	Not Available	610	Open in IMG/M
3300030629\|Ga0210268_1191444	Not Available	647	Open in IMG/M
3300030630\|Ga0210282_10237147	Not Available	612	Open in IMG/M
3300030632\|Ga0210250_10191182	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetes incertae sedis → Polyporales → Fibroporiaceae → Fibroporia → Fibroporia radiculosa	1024	Open in IMG/M
3300030763\|Ga0265763_1035756	Not Available	581	Open in IMG/M
3300030833\|Ga0265736_102576	Not Available	652	Open in IMG/M
3300030834\|Ga0265738_104183	Not Available	590	Open in IMG/M
3300030834\|Ga0265738_104349	Not Available	585	Open in IMG/M
3300030841\|Ga0075384_10024822	Not Available	568	Open in IMG/M
3300030850\|Ga0075387_11794146	Not Available	574	Open in IMG/M
3300030875\|Ga0265727_102787	Not Available	572	Open in IMG/M
3300030880\|Ga0265776_106733	Not Available	626	Open in IMG/M
3300030945\|Ga0075373_11656776	Not Available	598	Open in IMG/M
3300030947\|Ga0075390_10060007	Not Available	557	Open in IMG/M
3300030963\|Ga0265768_109525	Not Available	615	Open in IMG/M
3300030970\|Ga0075381_10012418	Not Available	593	Open in IMG/M
3300031011\|Ga0265774_103002	Not Available	661	Open in IMG/M
3300031011\|Ga0265774_104276	Not Available	590	Open in IMG/M
3300031011\|Ga0265774_104397	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	586	Open in IMG/M
3300031049\|Ga0074036_11231032	Not Available	536	Open in IMG/M
3300031050\|Ga0074028_11240266	Not Available	520	Open in IMG/M
3300031057\|Ga0170834_109059161	Not Available	607	Open in IMG/M
3300031057\|Ga0170834_112189340	Not Available	520	Open in IMG/M
3300031058\|Ga0308189_10321253	Not Available	613	Open in IMG/M
3300031090\|Ga0265760_10201206	Not Available	673	Open in IMG/M
3300031122\|Ga0170822_16323580	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	603	Open in IMG/M
3300031678\|Ga0310114_120894	Not Available	580	Open in IMG/M
3300032261\|Ga0306920_102313712	Not Available	744	Open in IMG/M
3300032515\|Ga0348332_12293320	Not Available	585	Open in IMG/M
3300032515\|Ga0348332_12452863	Not Available	629	Open in IMG/M
3300032897\|Ga0335071_11688753	Not Available	577	Open in IMG/M
3300033405\|Ga0326727_11263242	Not Available	508	Open in IMG/M
3300034480\|Ga0314789_022195	Not Available	583	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.67%
Host-Associated	Host-Associated	1.55%
Engineered	Engineered	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.95%
Aquatic	Environmental → Aquatic	14.73%
Human	Host-Associated → Human	1.55%
Solid Waste	Engineered → Solid Waste	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.07%
Freshwater	Environmental → Aquatic → Freshwater	12.40%
Peat	Environmental → Terrestrial → Peat	2.33%
Sediment	Environmental → Aquatic → Sediment	1.55%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.55%
Digestive System	Host-Associated → Human → Digestive System	1.55%
Marine	Environmental → Aquatic → Marine	0.78%
Grass	Engineered → Solid Waste → Grass	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.02%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.08%
Loam	Environmental → Terrestrial → Soil → Loam	6.98%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.20%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.55%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.55%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.78%
Lake	Environmental → Aquatic → Freshwater → Lake	0.78%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.78%
Composting	Engineered → Solid Waste → Grass → Composting	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.98%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.20%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.55%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.55%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.55%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.78%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.78%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.78%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.63%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	7.75%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.98%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	4.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.65%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	4.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.33%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.55%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.55%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.55%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.78%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.78%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.78%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.78%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.78%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.78%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.78%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.78%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300000334	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Thermokarst Bog cDNA B4 Metatranscriptome	Environmental	Open in IMG/M
3300000339	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active layer cDNA A2 Metatranscriptome	Environmental	Open in IMG/M
3300002654	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF113 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300004100	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF244 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004103	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004116	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF206 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004132	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF240 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004133	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF220 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004138	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF246 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004140	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF224 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004470	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 59 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004473	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004474	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004577	Freshwater sediment methanotrophic microbial communities from Lake Washington under simulated oxygen tension - Sediment Metatranscriptome 20_HOW5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004600	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 56 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004611	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 10 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004785	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005640	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_052 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005644	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_053 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_055 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006423	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_056 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006426	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_054 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006861	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006937	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A01 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300009583	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_9_15_B (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010066	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010092	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010120	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010854	Boreal forest soil eukaryotic communities from Alaska, USA - W4-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010856	Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010857	Boreal forest soil eukaryotic communities from Alaska, USA - W1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011036	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 82 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011048	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 37 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011066	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 3 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012378	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016700	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016701	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019158	Soil microbial communities from Bohemian Forest, Czech Republic ? CSI1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019180	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLA2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019207	Estuarine microbial communities from the Columbia River estuary - R.871 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019242	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019250	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019270	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021139	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300021286	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021307	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021855	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_18 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021909	Metatranscriptome of freshwater microbial communities from post-fracked creek in Pennsylvania, United States - NH:C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021938	Metatranscriptome of freshwater microbial communities from pre-fracked creek in Pennsylvania, United States - EE:C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022498	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022501	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023311	Combined Assembly of Gp0281739, Gp0281740, Gp0281741	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030526	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE044SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030528	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO084SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030529	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO740-VDE013SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030530	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE041SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030549	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO137-ANR102SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030575	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE050SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030586	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE041SO (Eukaryote Community Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300030594	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO141-VCO089SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030629	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE093SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030630	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO151-VCO115SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030632	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO132-ANR004SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030833	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030834	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLA5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030841	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030850	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB1 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030875	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030880	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030947	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030963	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030970	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB1 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031011	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031049	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Mineral C2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031050	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Humus N3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031678	Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300034480	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_00269750	2170459015	Switchgrass, Maize And Mischanthus Litter	MKSNLRVKRRDPWHGANALLKTAADPVLMVETRNKIIGVSQPGPQTGGATTS
thermBogB4DRAFT_1000891	3300000334	Soil	VKRRDPWHGANAPAKPVADLVLMVEMRQKITGVS*
actLayA2DRAFT_1006182	3300000339	Soil	VKRRDPWXGANALSKTAADPVLMVETRKKITGVSQPGSQAGGATTS*
Ga0005464J37254_1014093	3300002654	Forest Soil	VRNSNLRVKRRDPWQGANALPKAAADPVLMVKTRTRIAGVS*
Ga0058904_10266212	3300004100	Forest Soil	VKRRDPWHGANALSKTAADPVLMVETRKKIIDVSQPGSQAGGATTS*
Ga0058903_10314633	3300004103	Forest Soil	VKRRDPWHGANALSKAAADPVLMVETRKKITGVSQPGSQAGGATTS*
Ga0058885_10006112	3300004116	Forest Soil	MKSNLRVKRRDPWHGANALSKAAADPVLMVETRKKITGVSQPGSQA
Ga0058901_10138082	3300004120	Forest Soil	MKSNLRVKRRDPWHGANALSKAAADPVLMVETRKKITGVSQPGSQAGGATTS*
Ga0058902_10207702	3300004132	Forest Soil	MKGNLRVKRRDPWHGANAPLKAAADSVLMVETRNKITGVSQPGSQTGGATTS*
Ga0058892_10078432	3300004133	Forest Soil	MKSNLRVKRRDPWHGANAPSKTAADPVLMVETRKKIIGVSQPGSQAGGATTS*
Ga0058905_10140291	3300004138	Forest Soil	MKSNLRVKRRDPWRRANAPLKAAADPVLMVETRKKIIGVSQPGSQAGGATTS*
Ga0058894_10056221	3300004140	Forest Soil	MKSNLRVKRRDPWRRANALSKAAADPVLMVETRKKIIGVSQPGSQAGGATTS*
Ga0068967_10216571	3300004470	Peatlands Soil	MKSNLRVKRRDPWRRANALSKTAADPVLMVETRKKIIGVSQPGSQAGGATTS*
Ga0068919_10276831	3300004473	Peatlands Soil	MKSNLRVKRRDPLRRANAPSKAAADPVLVVETRKKIIGVSQPGSQTGGATTS*
Ga0068968_10101381	3300004474	Peatlands Soil	VKRRDPWHGANALSKTAADPVLMVETRKKITGVSQPGSQAGGATTS*
Ga0066502_1593621	3300004577	Freshwater Sediment	VKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQPGSQAGGATTS*
Ga0068964_10000351	3300004600	Peatlands Soil	MKSNLRVKRRDPWRRANALSKTAADPVLMVETRKKIIGVSQPG
Ga0068925_10222841	3300004611	Peatlands Soil	VKRRDPWHRANAPSKAAADLVLMVETLKKIIGVSQPGSQAGGATTS*
Ga0058858_10164331	3300004785	Host-Associated	MKSNLRVKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQPGPQ
Ga0058860_101944952	3300004801	Host-Associated	MKSNLRVKRRDPWHGANALSKAAADPVLMVETRKKIIGVSQPGPQAGGATTS*
Ga0075035_10846351	3300005640	Permafrost Soil	MKSNLRVKRRDPWHRANALSKTAADPVLMVETRKKIIGVSQPGPQAGGATTS*
Ga0075035_10960481	3300005640	Permafrost Soil	VRKSNLRVKRRDPWHGANALSKTVADPVLMVETRKKITGVSQPGSQAGGATTS*
Ga0075035_11030011	3300005640	Permafrost Soil	MKSNLRVKRRDPWHRANALSKTAADPVLMVETRKKITGVSQPGPQAGGATTS*
Ga0075035_11216552	3300005640	Permafrost Soil	VKRRDPWHRANAPSKAAADPVLMVETRKKIIGVSQPGSQA
Ga0075036_10586552	3300005644	Permafrost Soil	MKSNLRVKRRDPWHRANALSKTAADPVLMVETRKKITGVSQPGPQAGG
Ga0075036_11485052	3300005644	Permafrost Soil	MKSNLRVKRRDPWHGANALPKTAADPVLMVETRKKIIGVSQPGPQAGGATTS*
Ga0075038_101877101	3300005650	Permafrost Soil	MKSNLRVKRRDPWHRANALSKTAADPVLMVETRKKITGVSQPGPQTGGATTS*
Ga0075029_1003325271	3300006052	Watersheds	MKSNLRVKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQPGPQAGGATTS*
Ga0075015_1009263181	3300006102	Watersheds	VKRRDPWHRANAPSKAAADPVLMVETRKKIIGVSQPGSQAGGATTS*
Ga0075039_11273951	3300006423	Permafrost Soil	MKSNLRVKRRDPWHGANALSKTAADPVLMVETRKKIIG
Ga0075039_11338302	3300006423	Permafrost Soil	MKSNLRVKRRDPWHGANALSKAAADPVLMAETRNKIIGVSQPGSQAGGATTS*
Ga0075037_11098612	3300006426	Permafrost Soil	LKSNLKVKRRDPWHGANALSKTAADPVLMVETRKNITGVSQPGSQAGGATTS*
Ga0063777_10207821	3300006861	Peatlands Soil	MKSNLRVKRRDPWRRANALSKTAADPVLMVETRKKIIGVSQ
Ga0081243_14157441	3300006937	Tropical Rainforest Soil	VSESNLRVKRRDPWHGANAQPKAAADLVLMVKTRKEVADVSWPGSQAGGATTSRSELK
Ga0115598_10534341	3300009583	Wetland	VKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQ
Ga0127427_1002162	3300010066	Grasslands Soil	MKGNLRVKRRDPWHGANAPSKAAADPVLMVETRKKIIGVSQPGSQ
Ga0127468_11142701	3300010092	Grasslands Soil	MKGNLRVKRRDPWHGANALSKTAADPVLMVETRKK
Ga0127451_11465581	3300010120	Grasslands Soil	LKSNLRVKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQPG
Ga0126360_10153372	3300010854	Boreal Forest Soil	MKSNLRVKRRDPLHRANAPSKAAADPVLVVETRMKKIAGVS*
Ga0126358_12334351	3300010856	Boreal Forest Soil	VRKSNLRVKRRDPWQGANAPSKAAADPMLMVKTRKKKIAGVS*
Ga0126354_10180131	3300010857	Boreal Forest Soil	MKGNLRVKRRDPWHGANALSKAAADPVLMVKTRIKLQACLDLV
Ga0126348_11249101	3300010862	Boreal Forest Soil	MKSNLRVKRRDPWHGANALSKTAADPVLMVETRKKITGVSQ
Ga0126359_15297801	3300010869	Boreal Forest Soil	LKSNLRVKRRDPWHGANALSKTAADPVLMVETRKKIT
Ga0126359_15827441	3300010869	Boreal Forest Soil	LESNLRVKRRDPWHGANALSKAAADPVLMVETRKKIIGVSQPGS
Ga0138590_1372411	3300011036	Peatlands Soil	LRVKRRDPWHGANAPAKPAADLVLMVETREKITGV
Ga0138556_1189151	3300011048	Peatlands Soil	MKSNLRVKRRDPWRRANALSKTAADPVPMVETRKKIIGVSQPGSQ
Ga0138524_11278991	3300011066	Peatlands Soil	MKSNLRVKRRDPWRRANALSKTAADPVLMVETRKKIIG
Ga0134025_10741791	3300012378	Grasslands Soil	MKGNLRVKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQPGPQAGGATTS*
Ga0134041_12435861	3300012405	Grasslands Soil	MKSNLRVKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQP
Ga0137358_106774341	3300012582	Vadose Zone Soil	LKSNLRVKRRDPWHGANALSKTAADPVLMAETRKKIIGVSQPGPQAGGATTS
Ga0182030_101094111	3300014838	Bog	NLKVKRRDPWHRANAPSKAAADLVLMVETRKKIIGVSQPGSQAGGATTS*
Ga0181513_13338511	3300016700	Peatland	MKSNLRVKRRDPWRRANALSKTAADPVLMVETRKKIIGVSQPGSQ
Ga0181509_12135061	3300016701	Peatland	MKSNLRVKRRYPWHGANALLKAAADPVLMVKTRKKN
Ga0181505_104013781	3300016750	Peatland	VRKCNLRVKRRDPWHGANALSKTAADPVLMVETRK
Ga0184580_1254621	3300019158	Soil	VRKSNWRVKRRDPWHGANALSKAAADPVLMVETRKKITGVSQ
Ga0184578_1126631	3300019180	Soil	VRKSNWRVKRRDPWHGANALSKAAADPVLMVETRKKI
Ga0180034_10858901	3300019207	Estuarine	MKSNLRVKRRDPWHRANALSKAAAVPVQMVETRSKFIGVSQPGPQAGGA
Ga0181502_11058722	3300019242	Peatland	RVKRRDPWHGANAPAKPAADPVLMVETRDKITGVS
Ga0187790_10110901	3300019250	Peatland	LRVKRRDPWLRANAPSKAAADPELMVQTRNKIIGVSEPGSQAGG
Ga0181514_13032361	3300019268	Peatland	MKSNLRVKRRDPWRRANALSKTAADPVLMVETRKKI
Ga0181512_14406361	3300019270	Peatland	VRKCNLRVKRRDPWHGANALSKTAADPVLMVETRKKITGVS
Ga0214166_10188072	3300021139	Freshwater	MKSNLRVKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQPDSQAGGATTS
Ga0179583_10175582	3300021286	Vadose Zone Soil	MKSNLRVKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQ
Ga0179585_10023031	3300021307	Vadose Zone Soil	MKSNLRVKRRDPWHGANALSKTAADPVLMVETRKKIMGVSQPGS
Ga0213854_11960432	3300021855	Watersheds	VKKGNLRVKRRDPWCRANALSKTAADPVLMVETRKKI
Ga0213854_12804342	3300021855	Watersheds	MKSNLKVKRRDPWHRANAPSKAAADPVLMVETRKKIIGVSQ
Ga0213852_14852072	3300021858	Watersheds	LKRNLRVKRRDPWHGANALSKTAADPVLMVETRKKIIGV
Ga0213846_11059011	3300021909	Watersheds	MESDLRVKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQPGSQAGGATTS
Ga0213846_11211331	3300021909	Watersheds	MKSNLRVKRRDPWHGANALSKAAADPVLMVETRKKIIGVSQPGSQAGGATTS
Ga0213847_11691851	3300021938	Watersheds	MKGNLRVKRRDPWHVANALSKTAADPVLMVETRKKIIGVSQPGSQAGGA
Ga0242644_10282391	3300022498	Soil	LKGNLRVKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQ
Ga0242644_10435401	3300022498	Soil	MKSNLREKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQ
Ga0242645_10090601	3300022501	Soil	MKSNLREKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQPGSQAG
Ga0242645_10226361	3300022501	Soil	VKRRDPWHGANALSKAAADPVLMVETRKKIIGVSQPGSQAGG
Ga0242656_10779801	3300022525	Soil	LKGNLRVKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQPG
Ga0242660_11560812	3300022531	Soil	MKSNLREKRRDPWHGANALSKTAADPVLMVETRKKIIGVS
Ga0242662_103524941	3300022533	Soil	VRNSNLRVKRRDPWQGANALPKAAADPVLMVKTRTRIAGV
Ga0242653_11052851	3300022712	Soil	LKGNLRVKRRDPWHGANALSKTAADPVLMVETRKKIIDVSQPG
Ga0242673_10590691	3300022716	Soil	LKSNLRVKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQPGSQAG
Ga0242675_11052681	3300022718	Soil	MKCNLRVKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQ
Ga0242672_10930561	3300022720	Soil	MKSNLRVKRRDPWHGANALSKAAADPVLTVKTRKKIIGV
Ga0256681_118029391	3300023311	Freshwater	LREKRRDPWHGVNAPSKAAADLVLMVETRQKNYRRV
Ga0247680_10502291	3300024246	Soil	MESNLRVKRRDPWHGANALSKAAADPVLMVETRKKIIGVSQPGSQAGGATTS
Ga0179587_109667933	3300026557	Vadose Zone Soil	LKGNLRVKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQPGSQAGGATTS
Ga0302191_103265002	3300030049	Bog	RHRWAVSKCNLRVKRRDPWHGANALSKAAADPVLMVKTRKKIAGVS
Ga0302192_103826621	3300030507	Bog	NLRVKRRDPWHGANALSKAAADPVLMVKTRKKIAGVS
Ga0210267_11343561	3300030526	Soil	MKSNLRVKRRDPWHGANALSKAAADPVLMVETRKKI
Ga0210277_106436731	3300030528	Soil	LKSNLKVKRRDPWHGANALSKAAADPVLMVETRKKI
Ga0210284_19031071	3300030529	Soil	VKRRDPWHRANAPSKAAADPVLMVETRKKIIGVSQPGSQAG
Ga0210264_10904781	3300030530	Soil	MKSNLRVKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQPG
Ga0210257_106373131	3300030549	Soil	VRKSNLRVKRRDPWHGANALSKAAADPVLMVETRKKITGVSQPGSQAGGATTSRSGLKSL
Ga0210257_107855691	3300030549	Soil	MKSNLRVKRRDPWQWANAPSKAAADPVLMVETRKKIIGVSQPGSQAGGAT
Ga0210288_11794441	3300030575	Soil	MKSNLRVKRRDPWQGANAPSKAAADPMLMVKTRKK
Ga0265393_11229031	3300030586	Soil	MKSNLRVKRRDPWHGANALSKAAADPVLMAETRKKK
Ga0265393_11944281	3300030586	Soil	VRKSNLRVKRRDPWHGANALSKAAADPVLMVETRKKITGVSQP
Ga0210280_10943941	3300030594	Soil	VRKSNLRVKRRDPWHGANALSKAAADPVLMVETRKKITGVSQPGSQAGGATTSRS
Ga0210280_11099501	3300030594	Soil	MKSNLRVKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQPGSQ
Ga0210268_11914442	3300030629	Soil	VRKSNLRVKRRDPWHGANALSKAAADPVLMVETRKKITGVSQPGSQAGGATTSRSGLK
Ga0210282_102371471	3300030630	Soil	MKSNLRVKRRDPWRRANAPSKAAADPELMVETRKKIIGVSQPGSQA
Ga0210250_101911822	3300030632	Soil	MKSNLRVKRRDPWHRANAPLKAAADPVLMVETRKKIIGVSQPGSQAGGATTS
Ga0265763_10357561	3300030763	Soil	VRKSNLRVKRRDPWHGANALSKAAADPVLMVETRKKII
Ga0265736_1025761	3300030833	Soil	MKSNLRVKRRDPWHGANALSKAAADPVLMVETRKKIIGVSQPGPQAGGATTS
Ga0265738_1041831	3300030834	Soil	LKSNLRVKRRDPWHGANALSKTAADPVLMVETRKKIIGV
Ga0265738_1043491	3300030834	Soil	LKSNLRVKRRDPWHGANALSKTAADPVLMVETRKKV
Ga0075384_100248221	3300030841	Soil	VKESNLRVKRRDPWRRANALSKAAADPVLMVETRKKIIGVSQPGSQ
Ga0075387_117941462	3300030850	Soil	LKSNLRVKRRDPWHGANALSKAAADPVLMVETRKKIIGVSQPGSQAGG
Ga0265727_1027871	3300030875	Soil	MKSNLRVKRRDPWHGANALSKAAADPVLMVETRNK
Ga0265776_1067332	3300030880	Soil	VRKSNLRVKRRDPWHGANALSKAAADPVLMVETRKKITGVSQPGSQAGGATT
Ga0075373_116567761	3300030945	Soil	LKSNLRVKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQPGSQAGGAT
Ga0075390_100600071	3300030947	Soil	LRVKRRDPWRRANALSKTAADPVLMVETRKKIIGVS
Ga0265768_1095251	3300030963	Soil	MKSNLRVKRRDPWHGANALSKTAADPVLRVETRDKIMGVSQPGSQA
Ga0075381_100124181	3300030970	Soil	LKSNLRVKRRDPWHGANALSKMAADPVLMVETRKKIIGVSQPGSQAGGA
Ga0265774_1030022	3300031011	Soil	MKSNLRVKRRDPWHGANALSKAAADPVLMVETRNKITGVSQPGSQAGGATTSSSELKSL
Ga0265774_1042761	3300031011	Soil	VRKSNLRVKRRDPWRRANALSKTAADPVLMVKTRKKIAGV
Ga0265774_1043972	3300031011	Soil	MKSNLRVKRRDPWHGANALSKTAADPVLMVETRKKI
Ga0074036_112310321	3300031049	Soil	VRKSNLRVKRRDPWHGANALSKAAADPVLMVETRKKITGVSQPGSQ
Ga0074028_112402661	3300031050	Soil	VKKSNLRVKRRDPWHGANALSKAAADPVLMVETRKK
Ga0170834_1090591611	3300031057	Forest Soil	LKSNLRVKRRDPWHGANALSKTAADPVLMVETRKKIIGVSQPGP
Ga0170834_1121893401	3300031057	Forest Soil	MESNLRVKRRDPWHGANALSKTAADPVLMVETRKK
Ga0308189_103212531	3300031058	Soil	MKSNLRVKRRDPWHGANALLKAAADPVLMVETRKKIIGVSQPGPQ
Ga0265760_102012062	3300031090	Soil	MEGNLKVKRRDPWHRANAPSKAAADPVLMVETRKKIMGVSQPGSQAGGATTS
Ga0170822_163235801	3300031122	Forest Soil	MKSNLRVKRRDPWQGANALSKTAADPMLMVETRKKIIGVSQPG
Ga0310114_1208941	3300031678	Soil	LKGNLRVKRRDPWHGANALSKTAADPVLMAETRKK
Ga0306920_1023137122	3300032261	Soil	MKGNLRVKRRDPWHGANALSKTAADPVLMVETRKKI
Ga0348332_122933201	3300032515	Plant Litter	VKKCNLRVKRRDPWHGANALSKTAADPALMAETRKEIIGV
Ga0348332_124528631	3300032515	Plant Litter	MKGNLRVKRRDPWRRANAPSKAAADPVPMVETRKKIMGVSQPGSQAGGAT
Ga0335071_116887531	3300032897	Soil	GDLRVKRRDPWHGANAPAKPAADLVLMVETRKKITGVS
Ga0326727_112632421	3300033405	Peat Soil	VNKCNLRVKRRDPWHGANALSKAAADPVLMVKTRKKIAGVS
Ga0314789_022195_398_523	3300034480	Soil	MKESNLRVKRRDPWLRANALPKAVADLEQEVKTRERIIDVS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063716

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign