Basic Information | |
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Family ID | F063773 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 129 |
Average Sequence Length | 45 residues |
Representative Sequence | MGQEFTINSSAIESKINQLLPSQGGFGAGVDFSASTMVIPIVDL |
Number of Associated Samples | 106 |
Number of Associated Scaffolds | 129 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 96.12 % |
% of genes near scaffold ends (potentially truncated) | 98.45 % |
% of genes from short scaffolds (< 2000 bps) | 72.87 % |
Associated GOLD sequencing projects | 99 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.42 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (51.163 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater (37.984 % of family members) |
Environment Ontology (ENVO) | Unclassified (80.620 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (93.798 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 13.89% β-sheet: 2.78% Coil/Unstructured: 83.33% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.42 |
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Pfam ID | Name | % Frequency in 129 Family Scaffolds |
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PF02954 | HTH_8 | 1.55 |
PF14667 | Polysacc_synt_C | 0.78 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 51.16 % |
All Organisms | root | All Organisms | 48.84 % |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 37.98% |
Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 14.73% |
Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 7.75% |
Salt Marsh | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh | 4.65% |
Marine Water | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water | 3.10% |
Seawater | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater | 3.10% |
Freshwater To Marine Saline Gradient | Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient | 3.10% |
Marine Harbor | Environmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor | 3.10% |
Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 2.33% |
Marine Oceanic | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic | 2.33% |
Pelagic Marine | Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine | 2.33% |
Deep Ocean | Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean | 1.55% |
Marine | Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine | 1.55% |
Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine | 1.55% |
Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 1.55% |
Seawater | Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater | 0.78% |
Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 0.78% |
Seawater | Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater | 0.78% |
Deep Subsurface | Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface | 0.78% |
Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 0.78% |
Microbial Mat | Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat | 0.78% |
Marine Surface Water | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water | 0.78% |
Marine | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine | 0.78% |
Diffuse Hydrothermal Flow Volcanic Vent | Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent | 0.78% |
Hydrothermal Vent Plume | Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Hydrothermal Vent Plume | 0.78% |
Deep Subsurface | Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface | 0.78% |
Polar Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine | 0.78% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300001450 | Marine viral communities from the Pacific Ocean - LP-53 | Environmental | Open in IMG/M |
3300001516 | Hydrothermal vent plume microbial communities from Tahi Moana, Pacific Ocean, of black smokers | Environmental | Open in IMG/M |
3300003540 | Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS896_ElGuapo_DNA | Environmental | Open in IMG/M |
3300004460 | Marine viral communities from Newfoundland, Canada BC-1 | Environmental | Open in IMG/M |
3300004951 | Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-EVs | Environmental | Open in IMG/M |
3300006026 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA | Environmental | Open in IMG/M |
3300006029 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA | Environmental | Open in IMG/M |
3300006305 | Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0025m | Environmental | Open in IMG/M |
3300006334 | Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0025m | Environmental | Open in IMG/M |
3300006620 | Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ10 time point | Environmental | Open in IMG/M |
3300006637 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA | Environmental | Open in IMG/M |
3300006810 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 | Environmental | Open in IMG/M |
3300006919 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 | Environmental | Open in IMG/M |
3300007236 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA | Environmental | Open in IMG/M |
3300007329 | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S5 c16 Surf_B metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300007540 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG | Environmental | Open in IMG/M |
3300007543 | Estuarine microbial communities from the Columbia River estuary - metaG 1370B-3 | Environmental | Open in IMG/M |
3300007960 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG | Environmental | Open in IMG/M |
3300008012 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA | Environmental | Open in IMG/M |
3300008218 | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 | Environmental | Open in IMG/M |
3300009428 | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 | Environmental | Open in IMG/M |
3300009498 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 | Environmental | Open in IMG/M |
3300009507 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 | Environmental | Open in IMG/M |
3300010296 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA | Environmental | Open in IMG/M |
3300010297 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA | Environmental | Open in IMG/M |
3300010300 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA | Environmental | Open in IMG/M |
3300010316 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNA | Environmental | Open in IMG/M |
3300011013 | Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG | Environmental | Open in IMG/M |
3300011118 | Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG | Environmental | Open in IMG/M |
3300011331 | Marine microbial communities from the Southern Atlantic ocean - KN S17 Surf_B metaT (Metagenome Metatranscriptome) (version 2) | Environmental | Open in IMG/M |
3300012417 | Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 72hr light incubation - RNA13.B_72.20151113 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300012919 | Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG | Environmental | Open in IMG/M |
3300012953 | Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome | Environmental | Open in IMG/M |
3300012967 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_RNA1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300016745 | Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041411BS metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300016748 | Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011502CT metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300017709 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27 | Environmental | Open in IMG/M |
3300017710 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28 | Environmental | Open in IMG/M |
3300017713 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 | Environmental | Open in IMG/M |
3300017714 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15 | Environmental | Open in IMG/M |
3300017717 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25 | Environmental | Open in IMG/M |
3300017720 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 | Environmental | Open in IMG/M |
3300017725 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29 | Environmental | Open in IMG/M |
3300017726 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 | Environmental | Open in IMG/M |
3300017731 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16 | Environmental | Open in IMG/M |
3300017733 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23 | Environmental | Open in IMG/M |
3300017735 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21 | Environmental | Open in IMG/M |
3300017738 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12 | Environmental | Open in IMG/M |
3300017740 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13 | Environmental | Open in IMG/M |
3300017741 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19 | Environmental | Open in IMG/M |
3300017745 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15 | Environmental | Open in IMG/M |
3300017748 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21 | Environmental | Open in IMG/M |
3300017750 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29 | Environmental | Open in IMG/M |
3300017751 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2) | Environmental | Open in IMG/M |
3300017753 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26 | Environmental | Open in IMG/M |
3300017755 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09 | Environmental | Open in IMG/M |
3300017756 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 | Environmental | Open in IMG/M |
3300017757 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22 | Environmental | Open in IMG/M |
3300017759 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28 | Environmental | Open in IMG/M |
3300017764 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11 | Environmental | Open in IMG/M |
3300017765 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28 | Environmental | Open in IMG/M |
3300017767 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20 | Environmental | Open in IMG/M |
3300017768 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2) | Environmental | Open in IMG/M |
3300017769 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2) | Environmental | Open in IMG/M |
3300017771 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13 | Environmental | Open in IMG/M |
3300017776 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23 | Environmental | Open in IMG/M |
3300017779 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16 | Environmental | Open in IMG/M |
3300017782 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19 | Environmental | Open in IMG/M |
3300017786 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18 | Environmental | Open in IMG/M |
3300018426 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300019253 | Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101410AT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300019283 | Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101404CT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300020056 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly) | Environmental | Open in IMG/M |
3300020355 | Marine microbial communities from Tara Oceans - TARA_B100000676 (ERX556077-ERR598988) | Environmental | Open in IMG/M |
3300020367 | Marine microbial communities from Tara Oceans - TARA_B100000508 (ERX556112-ERR599005) | Environmental | Open in IMG/M |
3300020404 | Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978) | Environmental | Open in IMG/M |
3300020408 | Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX555963-ERR599118) | Environmental | Open in IMG/M |
3300020417 | Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082) | Environmental | Open in IMG/M |
3300020428 | Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094) | Environmental | Open in IMG/M |
3300020430 | Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160) | Environmental | Open in IMG/M |
3300020439 | Marine microbial communities from Tara Oceans - TARA_B100001939 (ERX556062-ERR599029) | Environmental | Open in IMG/M |
3300020450 | Marine microbial communities from Tara Oceans - TARA_B100000575 (ERX555933-ERR599077) | Environmental | Open in IMG/M |
3300021371 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497 | Environmental | Open in IMG/M |
3300022061 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2) | Environmental | Open in IMG/M |
3300022065 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2) | Environmental | Open in IMG/M |
3300022068 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2) | Environmental | Open in IMG/M |
3300022074 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2) | Environmental | Open in IMG/M |
3300023693 | Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 29R (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300024343 | Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction | Environmental | Open in IMG/M |
3300024518 (restricted) | Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2 | Environmental | Open in IMG/M |
3300025630 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025647 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
3300025810 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025853 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes) | Environmental | Open in IMG/M |
3300025869 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes) | Environmental | Open in IMG/M |
3300026134 | Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3438_5245 (SPAdes) | Environmental | Open in IMG/M |
3300027686 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA (SPAdes) | Environmental | Open in IMG/M |
3300028197 | Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10m | Environmental | Open in IMG/M |
3300028233 | Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - MB_1026D (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300028397 | Seawater microbial communities from Monterey Bay, California, United States - 50D | Environmental | Open in IMG/M |
3300029293 | Marine harbor viral communities from the Indian Ocean - SCH2 | Environmental | Open in IMG/M |
3300029301 | Marine harbor viral communities from the Indian Ocean - SRH1 | Environmental | Open in IMG/M |
3300029302 | Marine harbor viral communities from the Indian Ocean - SRB3 | Environmental | Open in IMG/M |
3300031683 | Marine microbial communities from water near the shore, Antarctic Ocean - #69 | Environmental | Open in IMG/M |
3300031848 | Marine microbial communities from water near the shore, Antarctic Ocean - #3 | Environmental | Open in IMG/M |
3300032274 | Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 1 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI24006J15134_100748891 | 3300001450 | Marine | VGQEFTINSPLIESKINQLLPSQGGFGAGVDFSASTMVIPIIDLTETAEG |
TahiMoana_10635991 | 3300001516 | Hydrothermal Vent Plume | LGQEFIIKSQKLEDKINQLLPSQGGFQAGVDLSASTTVIPI |
FS896DNA_109901662 | 3300003540 | Diffuse Hydrothermal Flow Volcanic Vent | MAEEFTIKSTAIEDKINQLLPSQGGFQPGVDFSASTMVIPIVDLTETAEGSLLRQDL |
Ga0066222_13113871 | 3300004460 | Marine | MAQEFTINSEAIESKINSLLPSQGGFGAGIDFSASTMIIPTIDLTETASGSSLR |
Ga0068513_10014305 | 3300004951 | Marine Water | MAQEFTIKSQDIEDKINQLLPTQGGFQPGVDFSASTMVVPIVDLTETAEGSSLRQDL |
Ga0068513_10014936 | 3300004951 | Marine Water | LGQEFVIKSKVLEDKINSLLPSQGGAGAGVDLSASTTVIPIVDLTESAEGST |
Ga0068513_10105473 | 3300004951 | Marine Water | MGQEFIIKSQNLEDKINQLLPSQGGYGASVDLSASTTVIPI |
Ga0068513_10184771 | 3300004951 | Marine Water | MGQEFIIKSQKLEDKVNQLLPSQGGFAAGVDLSASTTVIPIVDLTETAE |
Ga0075478_102474842 | 3300006026 | Aqueous | LAQEFTINSEIIESKINQLLPSQGGFAPGVDFSASTMVVPIID |
Ga0075466_10830621 | 3300006029 | Aqueous | MAQEFRINSSTIEAKINQLLPSQGGQGAGVDFSASTMVI |
Ga0068468_10031941 | 3300006305 | Marine | MGQEFVIKSTNLEDKINELLPAQGGYEPGVDLSASTQII |
Ga0099675_10736745 | 3300006334 | Marine | VGQEFVIKSPDIESKINQLLPSQGGFQAGVDISAST |
Ga0101444_1118661 | 3300006620 | Marine Surface Water | MGQEFIIKSQKLEDKVNQLLPSQGGFQAGVDLSASTTVIPIVDLTET |
Ga0075461_102512031 | 3300006637 | Aqueous | MAQEFTINSSDIESKINQLLPSQGGFGAGVDFTASTMVIPIVDLTESA |
Ga0070754_100442145 | 3300006810 | Aqueous | LAQEFIIKSQAIEDKINQLLPSQGGFQAGVDISASTQVVPII |
Ga0070754_100683304 | 3300006810 | Aqueous | MAQEFTINSSDIETKINQLLPSQGGFGAGVDFSASTMVIPIVDLTE |
Ga0070746_100427575 | 3300006919 | Aqueous | LAQEFIIKSQAIEDKINQLLPSQGGFQAGVDISASTQVVP |
Ga0075463_101982441 | 3300007236 | Aqueous | LAQEFTIKSEVIESKINQLLPSQGGYAPGVDFSASTMVVPIIDLTESA |
Ga0079240_12888211 | 3300007329 | Marine | MGQEFVIKSDALETKINQLLPSQGGAQAGVDLSASTTIIPIVDLTESAEG |
Ga0099847_10167925 | 3300007540 | Aqueous | LAEEFVIKSQAIEDKINQLLPSQGGFQPGVDFSASTMVMPIIDLTETA |
Ga0102853_10805831 | 3300007543 | Estuarine | MAQEFVINSTTIEDKINKLLPSQGGLGAGVDFSASTMVIPIVD |
Ga0099850_12848613 | 3300007960 | Aqueous | MAQEFTINSSAIESKINQLLPSQGGFGAGVDFSASTMVI |
Ga0075480_101717703 | 3300008012 | Aqueous | MGQEFDIKSPQIEDKINQLLPSQAGQAAGVDFSASTTVIPI |
Ga0075480_105720522 | 3300008012 | Aqueous | LGQEFIIKSQQIEDKINQLLPSQGGFAPGVDFSASTTVIPIVDLTETAEGSNLRQ |
Ga0114904_10161981 | 3300008218 | Deep Ocean | MAQEFIIKSEDIENKINQLLPSQGGFQAGVDFSASTMVI |
Ga0114915_10198491 | 3300009428 | Deep Ocean | MGQEFTINSAAIEAKINSLLPSQGGYGAGVDFSASTMIIPIIDLTETA |
Ga0115568_102790531 | 3300009498 | Pelagic Marine | MAQEFTINSSAIESKINQLLPSQGGFGAGVDFSASTMVIPIVDLTETAEG |
Ga0115572_105085471 | 3300009507 | Pelagic Marine | MAQEFQINSSAIESKINQLLPSQGGFGAGVDFSASTMVIPIVDLTETAEGSDVR |
Ga0129348_10208091 | 3300010296 | Freshwater To Marine Saline Gradient | MAQEFIIKSEQIEDKINQLLPSQGGFAAGVDFSASTMVI |
Ga0129345_10623371 | 3300010297 | Freshwater To Marine Saline Gradient | MGQEFIIKSQAIEDKINQLLPSQGGFQAGVDFSASTTVIPIIDL |
Ga0129351_11820363 | 3300010300 | Freshwater To Marine Saline Gradient | MAQEFTINSSAIESKINQLLPSQGGAGAGVDFSASTMVIPIVDLT |
Ga0136655_11447883 | 3300010316 | Freshwater To Marine Saline Gradient | MAQEFTINSSTIEQKINQLLPSQGGMGAGIDFSASTMVIPIV |
Ga0114934_101128043 | 3300011013 | Deep Subsurface | MGQEFVIKSPDLEDKINQLLPSQGGFAPGVDLSASTTIVPIVNLTE |
Ga0114922_113270751 | 3300011118 | Deep Subsurface | MAQEFSINSSAIESKINQLLPSQGGFGAGVDFSASTMVIPIVDLTETAEGSDV |
Ga0138384_10001131 | 3300011331 | Marine | MAQEFTIKSEQIESKINQLLPSQGGFGAGVDFSASTMVIPIV |
Ga0138262_11774333 | 3300012417 | Polar Marine | MAQEFVINSRSIETRLNTLLPSQAGEGAGIDFSASTMIIPTI |
Ga0160422_100520961 | 3300012919 | Seawater | MAQEFVIKSQDIEDKINQLLPSQGGFQAGVDFSASTMVVPIIDLTET |
Ga0163179_100753835 | 3300012953 | Seawater | MAQEFTINSSTIESKINQLLPSQGGFGAGIDFSASTMVIPIVDLTETAEG |
Ga0129343_12376601 | 3300012967 | Aqueous | LGQEFIIKSQQIEDKINQLLPSQGGYAPGVDFSASTTVIPIVDLTE |
Ga0182093_17532231 | 3300016745 | Salt Marsh | MAQEFRINSTAIEDKINQLLPSQGGFGTGIDFSASTMVIPVVNLTEAAEGSSL |
Ga0182043_13019561 | 3300016748 | Salt Marsh | MAQEFTIKSETIESKINQLLPSQGGFGAGVDFSASTMVIPIVDVTETAEGSVLRQDLQTA |
Ga0181387_10560743 | 3300017709 | Seawater | MAQEFTIKSAQIEDKINQLLPSQGGFQAGVDFSASTMVIPVVDLTETAEGSS |
Ga0181387_11124092 | 3300017709 | Seawater | MAEEFTIKSETLEDKINQLLPSQGGYATGLDLSASSMIVPIVDLTESAE |
Ga0181403_10648821 | 3300017710 | Seawater | LGQEFIIKSQTLEDKINQLLPSQGGFQPGVDLSASTQIIPIV |
Ga0181391_11370102 | 3300017713 | Seawater | MAQEFTINSTSIEDKINQLLPSQGGFGAGVDFSASTMVIPIVDLTESAEGA |
Ga0181412_11403081 | 3300017714 | Seawater | MAQEFTINSSAIETKINQLLPSQGGFGAGVDFSASTMVIP |
Ga0181404_10109705 | 3300017717 | Seawater | MGQEFIIKSQKLEDKVNQLLPSQGGFQAGVDLSASTTVIPIIDLTETAEGSDVRADLQ |
Ga0181404_10243474 | 3300017717 | Seawater | LAEEFTIKSEQIESKINQLLPSQGGFGAGVDFSASTMVIPIVDLTET |
Ga0181383_10112865 | 3300017720 | Seawater | MAEEFIIKSADIEDKINQLLPSQGGFQAGVDFSASTMVVPIVDLTETAEG |
Ga0181383_11557971 | 3300017720 | Seawater | MAQEFVVNSTTIENKINQLLPSQGGFGAGVDFTASTMVIPIVDITES |
Ga0181398_10108831 | 3300017725 | Seawater | LAQEFTIKSEAIESKINQLLPTQGGFQPGVDFSASTMVTP |
Ga0181381_10634533 | 3300017726 | Seawater | MGQEFTINSSAIESKINQLLPSQGGFGAGVDFSASTMVIPIVDLTETAEGS |
Ga0181416_10545051 | 3300017731 | Seawater | MAEEFTINSSSIESKINQLLPSQGGFAPGVDFSASTMVIPIVDLTETAEGS |
Ga0181426_10059801 | 3300017733 | Seawater | LAEEFVIKSSLIEDKINQLLPSQGGFQPGVDFSASTMVI |
Ga0181431_10091845 | 3300017735 | Seawater | MAQEFTIKSEAIESKINQLLPTQGGFQPGVDFSASTMVI |
Ga0181431_10827051 | 3300017735 | Seawater | MGQEFIIKSQALEDKINQLLPSQGGFQAGVDLSASTTVIPIID |
Ga0181428_10836061 | 3300017738 | Seawater | MAQEFIIKSDKLEDKIRQLLPSQGGFQAGVDLSASTQIVPIID |
Ga0181418_11282971 | 3300017740 | Seawater | MQQFRINSQVIEDKYNSLLPSQGGQGSGVDLSASTMVIPIIDLTESAEGSVLRQDLQS |
Ga0181421_10121395 | 3300017741 | Seawater | MAEEFIINSKEIESKINQLLPSQGGFGTGVDFSASTMVIPIVD |
Ga0181427_10253324 | 3300017745 | Seawater | MAQEFTINSSAIESKINQLLPSQGGFGAGVDFSASTMVIPIVDLTETAEGSDVRV |
Ga0181393_10141761 | 3300017748 | Seawater | MAQEFTINSSAIESKINQLLPSQGGFGAGIDFSASTMVIPIVD |
Ga0181405_11378123 | 3300017750 | Seawater | MADEFRINSSAIESKINQLLPSQGGQGARVDFSASTMVIPIVDL |
Ga0187219_10248741 | 3300017751 | Seawater | MAQEFQINSSSIESKINQLLPSQGGYGAGIDFSASTM |
Ga0187219_11561463 | 3300017751 | Seawater | MAEEFTINSSAIESKINQLLPSQGGFAPGVDFSASTMVIP |
Ga0181407_10126951 | 3300017753 | Seawater | MQQFRINSQVIEDKYNSLLPSQGGQGAGVDLSASTMVIPIIDLTESAEGS |
Ga0181407_11192361 | 3300017753 | Seawater | MAEEFTIKSEQIESKINQLLPSQGGFGAGVDFSASTMVIPIVDLT |
Ga0181411_10312021 | 3300017755 | Seawater | MAQEFTINSSAIESKINQLLPSQGGFGAGVDFSASTMVIPIVDLTESASGSS |
Ga0181411_10433661 | 3300017755 | Seawater | MAEEFTINSSAIESKINQLLPSQGGFAPGVDFSASTMVIPIVDLTDS |
Ga0181382_11090423 | 3300017756 | Seawater | MAQEFTIKSQAIEDKINQLLPSQGGYQAGVDFSASTRTIDVAIFIGG |
Ga0181420_11245303 | 3300017757 | Seawater | MGQEFLINSLELEQKINQLLPSQGGEGAGVDLSASTQIIPIIDLTETAEGSALRADL |
Ga0181414_10129465 | 3300017759 | Seawater | LAEEFVIKSQQIEDKINQLLPSQGGFQPGVDFSASTMVI |
Ga0181385_10160905 | 3300017764 | Seawater | MAEEFTINSAAIETKINQLLPSQGGFQPGVDFSASTMVIPIVD |
Ga0181385_10160985 | 3300017764 | Seawater | LAKEFIIKSQAIEDKVNQLLPSQGGFQAGVDFSASTMVIPIID |
Ga0181385_11262113 | 3300017764 | Seawater | MGQEFTINSSAIESKINQLLPSQGGFGAGVDFSASTMVIPIVDL |
Ga0181385_11527841 | 3300017764 | Seawater | MAQEFTINSAAIETKINQLLPSQGGFQPGVDFSASTMVIPIVD |
Ga0181413_12065701 | 3300017765 | Seawater | LAQEFTIKSEAIESKINQLLPTQGGFQPGVDFSASTMVIPIVDLT |
Ga0181413_12096052 | 3300017765 | Seawater | MAQEFVINSEAIESKINQLLPSQGGFGAGVDFSASTM |
Ga0181406_10159655 | 3300017767 | Seawater | LAEEFIIKSQAIEDKVNQLLPSQGGFQAGVDFSASTMVIPIIDLTETAKGGTTR |
Ga0187220_12085601 | 3300017768 | Seawater | MAQEFTINSSAIESKINQLLPSQGGFAPGVDFSASTTIIPIVDL |
Ga0187221_10684691 | 3300017769 | Seawater | MAQEFTIKSQAIEDKINQLLPSQGGYQAGVDFSAST |
Ga0181425_10424464 | 3300017771 | Seawater | MAQEFTINSQTIENKINQLLPSQGGFGAGVDFSASTMVIPIVDLTESAEGSGLRQ |
Ga0181394_11688863 | 3300017776 | Seawater | LAQEFVIKSSEIEDKINQLLPSQGGFQPGVDFSASTMVIPIVDL |
Ga0181395_10185715 | 3300017779 | Seawater | MGQEFIIKSQKLEDKVNQLLPSQGGFQAGVDLSASTTVIPIIDLTE |
Ga0181380_10344011 | 3300017782 | Seawater | MAQEFTINSSAIESKINQLLPSQGGFGAGIDFSASTMVIP |
Ga0181380_10794621 | 3300017782 | Seawater | QEFTINSSAIESKINQLLPSQGGFGAGVDFSASTTLISNK |
Ga0181380_11151043 | 3300017782 | Seawater | MAEEFTINSASIETKINQLLPSQGGFAPGVDFSASTMVIPIVDLTETAEG |
Ga0181380_12172473 | 3300017782 | Seawater | MATEFTINSAAIETKINQLLPSQGGFAPGVDFSASTMVIPVVDLTETAEGSGLRQDL |
Ga0181380_13138881 | 3300017782 | Seawater | MAQEFTINSNAIESKINQLLPSQGGFGAGVDFSASTM |
Ga0181424_101861791 | 3300017786 | Seawater | VGQEFVINSTALEDKINQLLPSQGGAAAGVDLSASTMIIPII |
Ga0181566_100832475 | 3300018426 | Salt Marsh | MAQEFTIKSETIESKINQLLPSQGGFGAGVDFSASTMVIPIVDVTE |
Ga0182064_12802561 | 3300019253 | Salt Marsh | LGQEFVIKSQKLEDKINQLLPSQGGSQAGVDLSASTTII |
Ga0182058_12258343 | 3300019283 | Salt Marsh | LGQEFVIKSQKLEDKINQLLPSQGGSQAGVDLSEST |
Ga0181574_104922521 | 3300020056 | Salt Marsh | MAQEFTIKSETIESKINQLLPSQGGFGAGVDFSASTMVIP |
Ga0211598_11378911 | 3300020355 | Marine | MGQEFIIKSDAIEDKINQLLPSQGGKQAGVDFSASTMVI |
Ga0211703_101696772 | 3300020367 | Marine | VANLGQEFIIKSQNLEDKVNQLLPSQGGFQAGVDLSASTTIIP |
Ga0211659_100405851 | 3300020404 | Marine | MGQEFIIKSQDLEDKINQLLPSQGGFQAGVDLSASTQIIPI |
Ga0211651_102812211 | 3300020408 | Marine | LGQEFIIKSQDLEDKINQLLPSQGGFQAGVDLSASTQI |
Ga0211528_100348301 | 3300020417 | Marine | VANLGQEFIIKSQNLEDKVNQLLPSQGGFQAGVDLSASTTIIPIVDL |
Ga0211521_100413805 | 3300020428 | Marine | VAEEFIINSNAIETKINSLLPSQGGFAPGVDFSASTMVIPIVDLTETAEGGTTRQD |
Ga0211622_103222333 | 3300020430 | Marine | MAQEFTIKSQDIEDKINQLLPSQGGFQAGVDFSAS |
Ga0211558_100336461 | 3300020439 | Marine | MGQEFIIKSPAIEDKINQLLPSQGGFQAGVDISASTTVIPIVDLTE |
Ga0211641_100638814 | 3300020450 | Marine | MGQEFVIKSPTLEDKINQLLPSQGGQQPGVDLSASTTIIPIVDLTESAEG |
Ga0213863_100431035 | 3300021371 | Seawater | MAQEFTINSNVIEDKINQLLPSQGGFGAGVDFSASTMVIPIVDLTESAEGSG |
Ga0212023_10480372 | 3300022061 | Aqueous | MAQEFRINSSTIEAKINQLLPSQGGQGAGVDFSASTMVIPIVDLTESAEGP |
Ga0212024_10011616 | 3300022065 | Aqueous | LAQEFTIKSEVIESKINQLLPSQGGYAPGVDFSASTMVVPII |
Ga0212021_10787531 | 3300022068 | Aqueous | MAQEFTIKSQDIEDKINQLLPSQGGFQPGVDFSASTMVVPIVDLTET |
Ga0224906_10420134 | 3300022074 | Seawater | MAQEFQINSSSIESKINQLLPSQGGYGAGIDFSASTMVIPVVDLTTTAE |
Ga0232112_10129071 | 3300023693 | Seawater | MAQEFSINSSALESKINQLLPSQGGFGAGVDLSASTQIIPIVDLTESAEGS |
Ga0244777_107016873 | 3300024343 | Estuarine | MAQEFVINSTTIEDKINKLLPSQGGLGAGVDFSASTMVIPIVDLTE |
(restricted) Ga0255048_104109673 | 3300024518 | Seawater | MAQEFTINSQAIESKINSLLPSQGNAGAGIDFSASTMVIPIIDLTETAEGSQVRA |
Ga0208004_11131601 | 3300025630 | Aqueous | MGQEFVIKSPQIEDKINQLLPSQAGQAAGVDFSASTTVIPIVDLTETAEG |
Ga0208160_11427021 | 3300025647 | Aqueous | LAQEFIIKSQDIEDKINQLLPSQGGFAAGVDFSGSTMVVPIIDLTETAEGS |
Ga0208543_10939263 | 3300025810 | Aqueous | LAQEFIIKSQAIEDKINQLLPSQGGFQAGVDISAST |
Ga0208645_12949632 | 3300025853 | Aqueous | MAQEFTINSTAIESKINQLLPSQGGFGAGVDFSASTMV |
Ga0209308_103631292 | 3300025869 | Pelagic Marine | MAQEFTINSSAIESKINQLLPSQGGFGAGVDFSASTMVIPIVDLTETAE |
Ga0208815_10040126 | 3300026134 | Marine Oceanic | LAEEFVIKSQQIEDKINQLLPSQGGFQAGVDFSAST |
Ga0208815_10041561 | 3300026134 | Marine Oceanic | MGQEFVINSADIEAKINQLLPSQAGFGAGVDFSASTTVIP |
Ga0208815_10404383 | 3300026134 | Marine Oceanic | LAQEFVIKSQDIEDKINQLLPSQGGFQAGVDFSASTMVVPIVDLTETAE |
Ga0209071_11295861 | 3300027686 | Marine | MGQEFTINSKSLETQFNALLPSQGGFGAGVDLSASTLIIPTIDLTSIAKGGSLREDLS |
Ga0257110_12681461 | 3300028197 | Marine | MAQEFTINSTAIESKINQLLPSQGGFGAGVDFSASTMVIPIVDLTETAEGSD |
Ga0256417_10848311 | 3300028233 | Seawater | MAQEFTINSSAIETKINQLLPSQGGFGAGIDFSASTMVIPIIDLTETASGS |
Ga0228639_11165613 | 3300028397 | Seawater | MAQEFSINSSALESKINQLLPSQGGFGAGVDLSASTQIIPIVDLT |
Ga0135211_10353271 | 3300029293 | Marine Harbor | MGQEFTIKSQAIEDKVNQLLPSQGGFQAGVDFSASTMVVPIVDLTETAEG |
Ga0135211_10362092 | 3300029293 | Marine Harbor | MAQEFTIKSQDIEDKINQLLPSQGGAGAGIDFSASTMVIPIIDLTETATS |
Ga0135222_10050763 | 3300029301 | Marine Harbor | MGQEFIIKSQGLEDKINQLLPSQGGFQAGVDLSASTQIIPIVDLTETASDRDWE |
Ga0135227_10072461 | 3300029302 | Marine Harbor | MAQEFTIKSPQIEDKINQLLPSQGGAGAGVDFSASTMVVPIVNLT |
Ga0308006_103010982 | 3300031683 | Marine | MGQEFTINSPEIESTINDLLPSQGGYGVGIDFSASTMIIPIIDVTPSAE |
Ga0308000_103062751 | 3300031848 | Marine | MGQEFTINSAAIEAKINSLLPSQGGYGAGVDFSAS |
Ga0316203_12176342 | 3300032274 | Microbial Mat | MAQEFRINSSVIEQKINQLLPSQGGAGAGVDFSAS |
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