Metagenome Family F063832

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063832
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	96 residues
Representative Sequence	MALKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPSAKHILSVEQVERWLAGATTNPTEATKKKKLKLLLVQR
Number of Associated Samples	102
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.94 %
% of genes near scaffold ends (potentially truncated)	33.33 %
% of genes from short scaffolds (< 2000 bps)	84.50 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.295 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.605 % of family members)
Environment Ontology (ENVO)	Unclassified (21.705 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.535 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.37% β-sheet: 22.22% Coil/Unstructured: 48.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00578	AhpC-TSA	11.63
PF02518	HATPase_c	8.53
PF03128	CXCXC	3.10
PF01068	DNA_ligase_A_M	3.10
PF07676	PD40	2.33
PF00437	T2SSE	2.33
PF10861	DUF2784	1.55
PF01436	NHL	1.55
PF13426	PAS_9	1.55
PF00005	ABC_tran	1.55
PF00664	ABC_membrane	1.55
PF08534	Redoxin	1.55
PF04679	DNA_ligase_A_C	1.55
PF01810	LysE	1.55
PF13338	AbiEi_4	0.78
PF00496	SBP_bac_5	0.78
PF01035	DNA_binding_1	0.78
PF09335	SNARE_assoc	0.78
PF12848	ABC_tran_Xtn	0.78
PF12706	Lactamase_B_2	0.78
PF01883	FeS_assembly_P	0.78
PF13671	AAA_33	0.78
PF13231	PMT_2	0.78
PF05157	T2SSE_N	0.78
PF07586	HXXSHH	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	4.65
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	3.10
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.78
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.78
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.78
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.07 %
Unclassified	root	N/A	20.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.07 %
Unclassified	root	N/A	20.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.29 %
Unclassified	root	N/A	20.93 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	36.43 %
Unclassified	root	N/A	20.93 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	13.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.10 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	30.23 %
Unclassified	root	N/A	20.93 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	13.95 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	3.10 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.23 %
Unclassified	root	N/A	20.93 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	13.95 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	3.10 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.78 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.23 %
Unclassified	root	N/A	20.93 %
Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	13.95 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	3.10 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.78 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.23 %
Unclassified	root	N/A	20.93 %
Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	13.95 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	3.10 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.78 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.23 %
Unclassified	root	N/A	20.93 %
Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	13.95 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	3.10 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.78 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.23 %
Unclassified	root	N/A	20.93 %
Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	13.95 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	3.10 %
unclassified Symbiodinium	no rank	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium	0.78 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.23 %
Unclassified	root	N/A	20.93 %
Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	13.95 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	3.10 %
Symbiodinium sp. KB8	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	0.78 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig1237626	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	675	Open in IMG/M
3300000559\|F14TC_106884619	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	691	Open in IMG/M
3300000956\|JGI10216J12902_100146887	All Organisms → cellular organisms → Bacteria → Proteobacteria	5944	Open in IMG/M
3300000956\|JGI10216J12902_104558357	All Organisms → cellular organisms → Bacteria	1761	Open in IMG/M
3300000956\|JGI10216J12902_105190845	All Organisms → cellular organisms → Bacteria → Acidobacteria	2403	Open in IMG/M
3300000956\|JGI10216J12902_105802239	All Organisms → cellular organisms → Bacteria	4168	Open in IMG/M
3300000956\|JGI10216J12902_108144473	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300000956\|JGI10216J12902_113741845	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300000956\|JGI10216J12902_114559320	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	607	Open in IMG/M
3300001686\|C688J18823_10152405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1584	Open in IMG/M
3300001686\|C688J18823_10942669	Not Available	548	Open in IMG/M
3300002568\|C688J35102_120077685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300004114\|Ga0062593_100315003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1343	Open in IMG/M
3300004153\|Ga0063455_100177652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1020	Open in IMG/M
3300004156\|Ga0062589_101274819	Not Available	708	Open in IMG/M
3300004157\|Ga0062590_100722182	Not Available	901	Open in IMG/M
3300004157\|Ga0062590_101336802	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	708	Open in IMG/M
3300004463\|Ga0063356_100364758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1835	Open in IMG/M
3300004480\|Ga0062592_100481686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300004778\|Ga0062383_10709866	Not Available	514	Open in IMG/M
3300005290\|Ga0065712_10290011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300005290\|Ga0065712_10636489	Not Available	572	Open in IMG/M
3300005294\|Ga0065705_10912281	Not Available	572	Open in IMG/M
3300005334\|Ga0068869_101023536	Not Available	720	Open in IMG/M
3300005347\|Ga0070668_100605367	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	959	Open in IMG/M
3300005356\|Ga0070674_100880541	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	779	Open in IMG/M
3300005364\|Ga0070673_101012461	Not Available	774	Open in IMG/M
3300005367\|Ga0070667_101433695	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	648	Open in IMG/M
3300005539\|Ga0068853_102257791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300005617\|Ga0068859_100203232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2066	Open in IMG/M
3300006031\|Ga0066651_10294169	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	866	Open in IMG/M
3300006046\|Ga0066652_100781177	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	912	Open in IMG/M
3300006195\|Ga0075366_10107971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1673	Open in IMG/M
3300006844\|Ga0075428_100000023	All Organisms → cellular organisms → Bacteria	127355	Open in IMG/M
3300006876\|Ga0079217_10224777	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	980	Open in IMG/M
3300006876\|Ga0079217_10805235	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	653	Open in IMG/M
3300006880\|Ga0075429_100092912	All Organisms → cellular organisms → Bacteria	2631	Open in IMG/M
3300006894\|Ga0079215_10907819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300006894\|Ga0079215_11039979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300006918\|Ga0079216_10272675	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	982	Open in IMG/M
3300006918\|Ga0079216_10983827	Not Available	649	Open in IMG/M
3300007004\|Ga0079218_10726538	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300009053\|Ga0105095_10109049	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300009053\|Ga0105095_10251075	All Organisms → cellular organisms → Bacteria → Proteobacteria	971	Open in IMG/M
3300009087\|Ga0105107_10005623	All Organisms → cellular organisms → Bacteria	8451	Open in IMG/M
3300009094\|Ga0111539_13459461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300009147\|Ga0114129_11637937	Not Available	787	Open in IMG/M
3300009153\|Ga0105094_10113410	All Organisms → cellular organisms → Bacteria	1535	Open in IMG/M
3300009156\|Ga0111538_10231856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2339	Open in IMG/M
3300009156\|Ga0111538_13519339	Not Available	543	Open in IMG/M
3300009609\|Ga0105347_1010528	All Organisms → cellular organisms → Bacteria	3186	Open in IMG/M
3300009649\|Ga0105855_1087013	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300009650\|Ga0105857_1132105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300009651\|Ga0105859_1192194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300009660\|Ga0105854_1052428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1248	Open in IMG/M
3300009661\|Ga0105858_1021117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1692	Open in IMG/M
3300009840\|Ga0126313_11259580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300010036\|Ga0126305_10006540	All Organisms → cellular organisms → Bacteria	5661	Open in IMG/M
3300010042\|Ga0126314_10658361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300012212\|Ga0150985_111016030	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300012212\|Ga0150985_113116809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300012212\|Ga0150985_118517558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300012212\|Ga0150985_122612361	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300012231\|Ga0137465_1217025	Not Available	571	Open in IMG/M
3300012469\|Ga0150984_111993791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1605	Open in IMG/M
3300012469\|Ga0150984_112000077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300012902\|Ga0157291_10127797	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	728	Open in IMG/M
3300012908\|Ga0157286_10231305	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	641	Open in IMG/M
3300012939\|Ga0162650_100006449	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300012987\|Ga0164307_10471174	Not Available	942	Open in IMG/M
3300012989\|Ga0164305_12196041	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	508	Open in IMG/M
3300013308\|Ga0157375_12538838	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	612	Open in IMG/M
3300014326\|Ga0157380_10766452	Not Available	978	Open in IMG/M
3300014876\|Ga0180064_1032291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1021	Open in IMG/M
3300015200\|Ga0173480_10369544	Not Available	824	Open in IMG/M
3300015201\|Ga0173478_10588560	Not Available	575	Open in IMG/M
3300015371\|Ga0132258_10221057	All Organisms → cellular organisms → Bacteria	4608	Open in IMG/M
3300015374\|Ga0132255_100090116	All Organisms → cellular organisms → Bacteria	4134	Open in IMG/M
3300015374\|Ga0132255_101608619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300017789\|Ga0136617_10288918	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300018067\|Ga0184611_1042007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1502	Open in IMG/M
3300018072\|Ga0184635_10038935	All Organisms → cellular organisms → Bacteria	1810	Open in IMG/M
3300018081\|Ga0184625_10023661	All Organisms → cellular organisms → Bacteria	2956	Open in IMG/M
3300018083\|Ga0184628_10029634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2730	Open in IMG/M
3300018422\|Ga0190265_10101369	All Organisms → cellular organisms → Bacteria	2699	Open in IMG/M
3300018422\|Ga0190265_13478507	Not Available	525	Open in IMG/M
3300018429\|Ga0190272_10404861	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300018429\|Ga0190272_11151900	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	757	Open in IMG/M
3300018429\|Ga0190272_12195311	Not Available	592	Open in IMG/M
3300018432\|Ga0190275_10067334	All Organisms → cellular organisms → Bacteria	3059	Open in IMG/M
3300018432\|Ga0190275_10225345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1791	Open in IMG/M
3300018469\|Ga0190270_10159747	Not Available	1845	Open in IMG/M
3300018469\|Ga0190270_10204787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1671	Open in IMG/M
3300018469\|Ga0190270_10861308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	920	Open in IMG/M
3300018476\|Ga0190274_10191195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1787	Open in IMG/M
3300018481\|Ga0190271_10383251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1496	Open in IMG/M
3300018481\|Ga0190271_11187344	Not Available	885	Open in IMG/M
3300019356\|Ga0173481_10839164	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	512	Open in IMG/M
3300019362\|Ga0173479_10074955	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300021339\|Ga0193706_1088396	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	845	Open in IMG/M
3300022309\|Ga0224510_10074405	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300025907\|Ga0207645_10813327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300025925\|Ga0207650_10387497	Not Available	1155	Open in IMG/M
3300025930\|Ga0207701_10047451	All Organisms → cellular organisms → Bacteria	3965	Open in IMG/M
3300025936\|Ga0207670_11016154	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	698	Open in IMG/M
3300026041\|Ga0207639_11934358	Not Available	551	Open in IMG/M
3300026276\|Ga0209847_1017377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1543	Open in IMG/M
3300027533\|Ga0208185_1057299	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	935	Open in IMG/M
3300027637\|Ga0209818_1096829	All Organisms → cellular organisms → Bacteria → Proteobacteria	777	Open in IMG/M
3300027731\|Ga0209592_1186721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300027818\|Ga0209706_10004748	All Organisms → cellular organisms → Bacteria	7210	Open in IMG/M
3300027876\|Ga0209974_10367238	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300027886\|Ga0209486_10557245	Not Available	721	Open in IMG/M
3300027907\|Ga0207428_10000002	All Organisms → cellular organisms → Bacteria	854851	Open in IMG/M
3300027909\|Ga0209382_11164991	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	791	Open in IMG/M
3300028578\|Ga0272482_10067408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300030006\|Ga0299907_10520960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300030521\|Ga0307511_10239338	All Organisms → cellular organisms → Bacteria → Acidobacteria	887	Open in IMG/M
3300031228\|Ga0299914_10398104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1202	Open in IMG/M
3300031548\|Ga0307408_100267119	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300031548\|Ga0307408_101328195	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	675	Open in IMG/M
3300031854\|Ga0310904_10307431	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300031908\|Ga0310900_10509242	Not Available	937	Open in IMG/M
3300032075\|Ga0310890_10201916	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300032144\|Ga0315910_11131840	Not Available	611	Open in IMG/M
3300034115\|Ga0364945_0258615	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium RIFCSPLOWO2_12_FULL_68_9	538	Open in IMG/M
3300034147\|Ga0364925_0301158	Not Available	600	Open in IMG/M
3300034268\|Ga0372943_0512573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.32%
Host-Associated	Host-Associated	28.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.14%
Plants	Host-Associated → Plants	28.68%
Aquatic	Environmental → Aquatic	13.18%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.63%
Freshwater	Environmental → Aquatic → Freshwater	6.20%
Sediment	Environmental → Aquatic → Sediment	6.20%
Floodplain	Environmental → Terrestrial → Floodplain	1.55%
Roots	Host-Associated → Plants → Roots	1.55%
Marine	Environmental → Aquatic → Marine	0.78%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.20%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.65%
Loam	Environmental → Terrestrial → Soil → Loam	4.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.65%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.78%
Ice	Environmental → Aquatic → Freshwater → Ice	0.78%
Sediment	Environmental → Aquatic → Marine → Sediment	0.78%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.78%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.20%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.88%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.33%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.55%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.78%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.20%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.65%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	4.65%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.10%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.10%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.88%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.33%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.55%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.55%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.55%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.55%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.78%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.78%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.78%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300009650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061	Environmental	Open in IMG/M
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014876	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200_16_10D	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021339	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1	Environmental	Open in IMG/M
3300022309	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026276	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_09538120	2124908045	Soil	NIVLMAAPCPLGRSQQWRTKYENYDNFWQMWLKMCAVSFTDMRGIRHSAEVEAESLYEAAVQGIRRLNQDPWIERIGPATKLEIEVREPSAKHVLSVDQVERWLAGTTTNPTEAMKKKKLKLLLVQR
F14TC_1068846191	3300000559	Soil	VPVHVCRVSFTDVRGFRHSAEVEAESLFEAAILGIRRLNQDPWTERIGPATVLEVEAREPSTLHTISLQQVERWLAGATINPSEAARKAKLKTLLVRKWLEPQ*
JGI10216J12902_1001468873	3300000956	Soil	MALKLCAVSFTDIRGIRHTAEVEAESLYEAAVQGIRRLNQDPWIERIGPATKLEIEVREPAAKHSLTVEQVERWLAGATPNPTEATKKKKLKLLLIQR*
JGI10216J12902_1045583572	3300000956	Soil	MSLKACAVSFTDVRGIRHTAEVEAESLYEAAVQGIRRLNQDPWIERIGPGTRLDIEVREPGVRHTLSVDQVQRWLAGATTNPTEATKKKKLKLLLVQR*
JGI10216J12902_1051908452	3300000956	Soil	MPVKLCVVSFADVRGIRHSVEVEAESLYEAAVQGIRRLNQDPWIERIGPGTMLQVEVREPSATHSITVEQVERWLAGVTKNPTEATKKAKLKLLLVQR*
JGI10216J12902_1058022394	3300000956	Soil	MTLKRCAVSFTDVRGIRHGAEVEAESLYEAAVQGIRRLNQDPWIERIGLGTKLEIEVREPSTKHVLSVEQVERWLAGATTNPTEATKKKKLKLLLVQR*
JGI10216J12902_1081444731	3300000956	Soil	MGLKMCAVSFTDMRGIKHSAEVEAESLYEAAVQGIRRLNQDPWIERIGPATKLEIEVREPSAKHVLSVDQVERWLAGTTTNPTEAT
JGI10216J12902_1137418453	3300000956	Soil	DNFCEMGLKVCAVSFTDMRGIKHSAEVEAESLYEAAVQGIRRLNQDPWMERIGPGTKLEIEVREPAVKHALSVEQVERWLAGATKNPTEATKKAKLKLLLVQR*
JGI10216J12902_1145593202	3300000956	Soil	RHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPSAKHILSVEQVERWLAGATTNPTEATKKKKLKLLLVQR*
C688J18823_101524054	3300001686	Soil	VTVRECIVSFKDARGIRHSAQVEAESLYEAAVLGVRRLNDDPWLEKIGPATVLEIEVRAPGVSHAISLQQIERWLAGATANPSESMKKAKLKMLLVQR*
C688J18823_109426691	3300001686	Soil	VSFKDARGIRHSAQVEAESLYEAAVLGVRRLNDDPWLEKIGPATVLEVEVRAPGVSHAISLQQIERWLAGATANPSESMKKAKLKLLLVQR*
C688J35102_1200776853	3300002568	Soil	FSGTSPYLLCESRRRTNSECHAIVATVTVRECIVSFKDARGIRHSAQVEAESLYEAAVLGVRRLNDDPWLEKIGPATVLEIEVRAPGVSHAISLQQIERWLAGATANPSESMKKAKLKMLLVQR*
Ga0062593_1003150032	3300004114	Soil	MALKACSVSFTDVRGIKHTAEVEAESLYEAAVQGIRRLNQDPWLERIGPGTALEIEIREPSAKHSITVEQVQRWLAGTTKNPTEATKKAKLKLLLVQR*
Ga0063455_1001776522	3300004153	Soil	VTVRECIVSFKDARGIRHSAQVEAESLYEAAVLGVRRLNDDPWLEKIGPATVLEVEVRAPGVSHAISLQQIERWLAGATANPSESMKKAKLKLLLVQR*
Ga0062589_1012748191	3300004156	Soil	MALKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPSARHTLSVEQVERWLAGATANPTEATKKK
Ga0062590_1007221821	3300004157	Soil	MCAVSFTDVRGIKHTAEVEAESLYEAAVQGIRQLNHDPWIERIGRGTKLEIEVREPSAKHVLSVEQVERWLAGATTNPTEATKKKKLKLLLVQR
Ga0062590_1013368022	3300004157	Soil	MALKRCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPAARHILSVEQVERWLAGATTNPTEATKKKKLKLLLVQR*
Ga0063356_1003647581	3300004463	Arabidopsis Thaliana Rhizosphere	MCAVSFTDVRGIKHTAEVEAESLYEAAVQGIRRLNHDPWIERIGPATKLEIEVREPSAKHVLSVEQVERWLAGTTANPTEATKKKKLKLLLVQR*
Ga0062592_1004816862	3300004480	Soil	VRGIKHTAEVEAESLYEAAVQGIRQLNHDPWIERIGRGTKLEIEVREPSAKHVLSVEQVERWLAGATTNPTEATKKKKLKLLLVQR*
Ga0062383_107098661	3300004778	Wetland Sediment	VSLKQCAVSFTDARGIKHAADLEADSLYEAAVMGIRRLNQDPWIERIGPGTKLEIEVRDPSVKHVLTVEQVERWLAGATKNPTEATKKAKLKLLLVQRSGR*
Ga0065712_102900111	3300005290	Miscanthus Rhizosphere	MALKRCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPSARHTLSVEQVERWLAGATANPTEATKKKKLKLLLVQR*
Ga0065712_106364891	3300005290	Miscanthus Rhizosphere	VALRRCIVSFTDVRGIRHSVDVDAESLYEAAVMGIRRLNDDPWLERIGATTVLEIEVRTPGTTHAITLQQVERWLAGATRNPYESMKKAKLKMLLVRG*
Ga0065705_109122811	3300005294	Switchgrass Rhizosphere	GITHTAEVEAESLYEAAVQGIRRLNQDPWLERIGPGTKLEIEIREPSAKHAITVEQVERWLAGATKSPTEATKKAKLKLLLIQK*
Ga0068869_1010235361	3300005334	Miscanthus Rhizosphere	VALRRCIVSFTDVRGVRHSVDVDAESLYEAAVIGIRRLNDDPWLERIGAATVLEIEVRAPGTTHTITLQQVERWLAGA
Ga0070668_1006053673	3300005347	Switchgrass Rhizosphere	VALRRCIVSFTDVRGVRHSVDVDAESLYEAAVTGIRRLNDDPWLERIGAATVLEIEVRAPGTTHTITLQQVERWLAGATRNPYESMKKAKLKMLLMRG*
Ga0070674_1008805411	3300005356	Miscanthus Rhizosphere	HTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPSARHTLSVEQVERWLAGATANPTEATKKKKLKLLLVQR*
Ga0070673_1010124612	3300005364	Switchgrass Rhizosphere	MALKRCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPSARHILSVEQVERWLAGATAN
Ga0070667_1014336952	3300005367	Switchgrass Rhizosphere	ANLLSSGIVALRRCIVSFTDVRGVRHSVDVDAESLYEAAVIGIRRLNDDPWLERIGAATVLEIEVRAPGTTHTITLQQVERWLAGTTKNPYESMKKAKLKMLLVRG*
Ga0068853_1022577912	3300005539	Corn Rhizosphere	VAPRTCTVAFKDARGIRHSTDVEAESLYEAAVLGVRRLNDDPWTERIGPATVLEIEVRTPATRHTISRQQIERWLAGGTTNPNE
Ga0068859_1002032322	3300005617	Switchgrass Rhizosphere	VALRRCIVSFTDVRGIRHSVDVDAESLYEAAVMGIRRLNEDPWLERIGATTVLEIEVRTPGTTHAITLQQVERWLAGATRNPYESMKKAKLKMLLVKG*
Ga0066651_102941692	3300006031	Soil	MALKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPSARHILSVEQVERWLAGATANPTEATKKKKLKLLLVQR*
Ga0066652_1007811772	3300006046	Soil	MALKQCAVSFTDIRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPSARHILSVEQVERWLAGATANPTEATKKKKLKLLLVQR*
Ga0075366_101079712	3300006195	Populus Endosphere	MALKLCAVAFTDVRGIRHSVDVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEIEVREPAAKHMLTVEQVERWLAGATTNPTEATKKKKLKLLLVQR*
Ga0075428_10000002340	3300006844	Populus Rhizosphere	MPLKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTRLEVEVREPSARHVVSVEQVERWLAGATANPTEATKKKKLKLLLVQR*
Ga0079217_102247773	3300006876	Agricultural Soil	MSLKVCAVSFTDVRGIRHSAEVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEIEVREPSAKHVLTVDQVERWLAGATTNPTEATKKKKLKLLLVQR*
Ga0079217_108052352	3300006876	Agricultural Soil	MSLKACAVSFTDVRGIRHTAEVEADSLYEAAVQGIRRLNQDPWIERIGPGTKLEIEVREPAVKHTLSVEQVERWLAGATKNPTEATKKAKLKLLLVQR*
Ga0075429_1000929121	3300006880	Populus Rhizosphere	ADVEAESLYEAAVQGIRRLNQDPWIERIGPGTRLEVEVREPSARHVVSVEQVERWLAGATANPTEATKKKKLKLLLVQR*
Ga0079215_109078192	3300006894	Agricultural Soil	MPLKACAVSFMDVRGIRHTAEVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEIDVREPSVKHVLSVEQVERWLAGATKNPTEATRKAKLKLLLVQR*
Ga0079215_110399792	3300006894	Agricultural Soil	LKQCAVSFTDVRGIRHSAEVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEIDVREPSTKHVLSVDQVERWLAGATANPTEATKKKKLKLLLVQR*
Ga0079216_102726752	3300006918	Agricultural Soil	MSLKVCAVSFTDVRGIRHSAEVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEIEVREPSAKHVLTVDQVERWLAGATTNPTEATKKKKLELLLVQRRWKG*
Ga0079216_109838271	3300006918	Agricultural Soil	MGLKVCAVSFTDMRGIKHSAEVEAESLYEAAVQGIRRLNQDPWMERIGPGTKLEIDVREPSVKHVLSVEQVERWLAGATKNPTEATKKAKLKLLLVQR*
Ga0079218_107265382	3300007004	Agricultural Soil	MGLKVCAVSFTDMRGIKHSAEVEAESLYEAALQGIRRLNQDPWMERLGRATKLEIEVREPSAKHVLTVDQVERWLAGTTTNPTEATKKKKLKLLLVQR*
Ga0105095_101090493	3300009053	Freshwater Sediment	MSLKKCAVSFTDVRGIRHSAEVEAESLYEAAVQGIRRLNQSPWIERIGRGTTLEVEVREPSAKHYITVEQIERWLTGATKSPTEATKKAKLKLLLVQR*
Ga0105095_102510752	3300009053	Freshwater Sediment	MSLKQCAVSFTDIRGVRHSADVEAESLYEAAVQGIRRLNQDPWMERIGPGTKLEIDVREPSVKHVLSVEQVERWLAGATKNPTESTRKAKLKLLLVQR*
Ga0105107_100056235	3300009087	Freshwater Sediment	MGVKVCSVSFKDVRGLRHTAEVEAESLYEAAVQGIRRLNQDPWIERIGPGTILDVEVREPSAKHSITVEQVERWLAGATKNPTEATKKAKLKLLLVRR*
Ga0111539_134594612	3300009094	Populus Rhizosphere	MSLKMCAVSFTDVRGIKHTAEVEAESLYEASVQGIRRLNHDPWIERIGPATKLEIEVREPSAKHVLSVEQVERWLAGTTTNPTEATKKKKLKLLLVQ
Ga0114129_116379371	3300009147	Populus Rhizosphere	VSFVDTRGIRHSTDVEAESLYEAAVLGIRRLNEHPWVEQIGSATVMDIEVREPSTRHAVTLQQVERWLAGATANPTEASKKAKLKMMLVQR*
Ga0105094_101134103	3300009153	Freshwater Sediment	HSAEVEAESLYEAAVQGIRRLNQSPWIERIGRGTTLEVEVREPSAKHYITVEQIERWLTGATKSPTEATKKAKLKLLLVQR*
Ga0111538_102318563	3300009156	Populus Rhizosphere	MSLKMCAVSFTDVRGIKHTAEVEAESLYEAAVQGIRRLNHDPWIERIGPATKLEIEVREPSAKHVLSVEQVERWLAGTTTNPTEATKKKKLKLLLVQR*
Ga0111538_135193392	3300009156	Populus Rhizosphere	MALKRCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPATKLEVEVREPSAKHVLSVEQVERWLAGATANPTEATKKKKLKLLLVQR*
Ga0105347_10105283	3300009609	Soil	MALKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPAAKHILSVEQVERWLAGATTNPTEATKKKKLKLLLVQR*
Ga0105855_10870132	3300009649	Permafrost Soil	MLAAVALRPCIVSFKDLRGIRHSTDVEAESLYEAAVMGIRRLNEDPWLEKIGPATVLEIEVRNPGTTHAISLQQVERWLAGATTNPSEATKKVKLKMLLMRGPASATR*
Ga0105857_11321052	3300009650	Permafrost Soil	ALRPCIVSFKDLRGIRHSTDVEAESLYEAAVMGIRRLNEDPWLEKIGPATVLEIEVRNPGTTHAISLQQVERWLAGATTNPSEASKKVKLKMLLMRGTASATR*
Ga0105859_11921941	3300009651	Permafrost Soil	DLRGIRHSTDVEAESLYEAAVMGIRRLNEDPWLEKIGPATVLEIEVRNPGTTHAISLQQVERWLAGATTNPSEASKKVKLKMLLMRGPASATR*
Ga0105854_10524281	3300009660	Permafrost Soil	VALRPCIVSFKDLRGIRHSTDVEAESLYEAAVMGIRRLNEDPWLEKIGPATVLEIEVRNPGTTHAISLQQVERWLAGATTNPSEASKKVKLKMLLMRGPASATR*
Ga0105858_10211171	3300009661	Permafrost Soil	MLAAVALRPCIVSFKDLRGIRHSTDVEAESLYEAAVMGIRRLNEDPWLEKIGPATVLEIEVRNPGTTHAISLQQVERWLAGATTNPSEASKKVKLKMLLMRGPASATR*
Ga0126313_112595801	3300009840	Serpentine Soil	VRGVRHSVDVEAESLYEAAVMGIRRLNDDPWLERIGTATVLEIEVRAPGTTHTITLQQVERWLAGATKNPYESMKKAK
Ga0126305_100065403	3300010036	Serpentine Soil	MSLKACSVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEIEVRDPSTRHVLSVEQVERWLAGATKNPTEATKKAKLKLLLVQR*
Ga0126314_106583611	3300010042	Serpentine Soil	VRGVRHSVDVEAESLYEAAVMGIRRLNDDPWLERIGTATVLEIEVRAPGTTHTITLQQVERWLAGATKNPYESMKKAKLKMLLMRG*
Ga0134127_126570201	3300010399	Terrestrial Soil	MALKACSVSFTDVRGIKHTAEVEAESLYEAAVQGIRRLNQDPWLERIGPGTALEIEIREPSAKHSITVEQVQRWLAG
Ga0150985_1110160302	3300012212	Avena Fatua Rhizosphere	MLSIVPARICIVSFKDVRGIQHSTEVEADSLYEAAVIGITRLNHDPWLEQIVSSTVLEIEVRNPGTRHTLSLQQIERWLASATPNPGDAMKKAKLKMMLVQR*
Ga0150985_1131168091	3300012212	Avena Fatua Rhizosphere	VRECIVSFKDARGIRHSAHVEAESLYEAAVLGVRRLNDDPWLEKIGPATVLEIEVRAPGVSHAISLQQIERWLAGATANPSESMKKAKLKMLLVQR*
Ga0150985_1185175582	3300012212	Avena Fatua Rhizosphere	AIVTAVTLRDCIVSFKDARGIRHSAQVEAESLYEAAVLGVRRLNDDPWLEKIGPATVLEIEVRAPGVSHAISLQQIERWLAGATANPSESMKKAKLKMLLVQR*
Ga0150985_1226123612	3300012212	Avena Fatua Rhizosphere	MLSIVPARICIVSFKDVRGIQHSTEVEADSLYEAAVIGITRLNHDPWLEKIASSTVLEIEVRNPGTRHTLSLQQIERWLAS
Ga0137465_12170251	3300012231	Soil	MSLKQCSVSFTDVRGIRHSADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEIDVRDPSVKHVLSVEQVERWLAGATKNPTEATRKAKLKLLLVQR*
Ga0150984_1119937914	3300012469	Avena Fatua Rhizosphere	VTVRECIVSFKDARGIRHSAHVEAESLYEAAVLGVRRLNDDPWLEKIGPATVLEIEVRAPGVSHAISLQQIERWLAGATANPSESMKKAKLKLLLVQR*
Ga0150984_1120000772	3300012469	Avena Fatua Rhizosphere	VTLRDCIVSFKDARGIRHSAQVEAESLYEAAVLGVRRLNDDPWLEKIGPATVLEIEVRAPGVSHAISLQQIERWLAGATANPSESMKKAKLKMLLVQR*
Ga0157291_101277971	3300012902	Soil	MTLKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPSARHTLSVEQVERWLAGATANPTEATKKKKLKLLLVQR*
Ga0157286_102313052	3300012908	Soil	MALKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVCEPAARHILSVEQVERWLAGATTNPTEATKKKKLKLLLVQR*
Ga0162650_1000064492	3300012939	Soil	MALKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPAARHVLTVDQVERWLAGATANPTEATKKKKLKLLLVQR*
Ga0164307_104711741	3300012987	Soil	VALRPCIVSFKDMRGVRHAAEVEAESLYEAAVLGVRRLNEDPWLEKIGPATILEIEVRAPGTTHTISLQQVERWLAGTTKNPYESMKKAKLKMILVQG*
Ga0164305_121960411	3300012989	Soil	HAAEVEAESLYEAAVLGVRRLNEDPWLEKIGPATILEIEVRAPGTTHTISLQQVERWLAGTTKNPYESMKKAKLKMILVQG*
Ga0157375_125388382	3300013308	Miscanthus Rhizosphere	MALRRCSVSFTDMRGVRHSVDVDAESLYEAAVIGIRRLNDDPWLERIGAATVLEIEVRAPGTTHTITLQQVERWLAGATKNPYESMKKAKLKMLLVRG*
Ga0157380_107664522	3300014326	Switchgrass Rhizosphere	MALKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPSARHVLSVEQVERWLAGATANPTEATKKKKLKLLLVQR*
Ga0180064_10322911	3300014876	Soil	SELCDKFLGMALKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPAAKHILSVEQVERWLAGATTNPTEATKKKKLKLLLVQR*
Ga0173480_103695441	3300015200	Soil	MTLKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPSARHTLSVEQVERWLAGATAN
Ga0173478_105885602	3300015201	Soil	MTLKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPSARHTLSVEQVERWLAGAT
Ga0132258_102210573	3300015371	Arabidopsis Rhizosphere	MSLKACSVSFTDVRGIKHSAEIEAESLYEAAVQGIRRLNQDPWIERIGPGTRLDIEIREPSAKHSITVEQVQRWLAGPTRNPTEATKKAKLKLLLVQR*
Ga0132255_1000901163	3300015374	Arabidopsis Rhizosphere	MSLKASSVSFTDVRGIKHSAEIEAESLYEAAVQGIRRLNQDPWIERIGPGTRLDIEIREPSAKHSITVEQVQRWLAGPTRNPTEATKKAKLKLLLVQR*
Ga0132255_1016086192	3300015374	Arabidopsis Rhizosphere	CAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNHDPWIERIGPGTRLEIEVREPAARHILSVEQVERWLAGATANPTEATKKRKLKLLLVQR*
Ga0136617_102889183	3300017789	Polar Desert Sand	MGLKQCAVSFTDVRGIRHSADVEAESLYEAAVQGIRRLNQDPWIERIGPGTRLEIDVREPCVTHVLSVEQVERWLAGATKNPTEATKKAKLKLLLVQR
Ga0184611_10420072	3300018067	Groundwater Sediment	MALKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPSAKHILSVEQVERWLAGATTNPTEATKKKKLKLLLVQR
Ga0184635_100389353	3300018072	Groundwater Sediment	MALKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGRGTKLEVEVREPSAKHILSVEHVERWLAGATTNPTEATKKKKLKLLLVQR
Ga0184625_100236612	3300018081	Groundwater Sediment	MALKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPSAKHILSVEHVERWLAGATTNPTEATKKKKLKLLLVQR
Ga0184628_100296343	3300018083	Groundwater Sediment	MALKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPSARHTLSVEQVERWLAGATANPTEATKKKKLKLLLVQR
Ga0190265_101013693	3300018422	Soil	MSVKQCTVSFTDLRGIRHAADVEESLYEAAVQGIRRLNQDPWIERIGPGTKLEIEVRDPSVKHVLSVEQVERWLAGATKNPTEATRKAKLKLLLVQR
Ga0190265_134785071	3300018422	Soil	MSLKACAVSFTDVRGISHTAEVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEIEVREPAVKHALSVEQVERWLAGATKNPTEATKKAKLKLLLVQR
Ga0190272_104048611	3300018429	Soil	RHSADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEIEVRDPSVKHVLSVEQVERWLAGATKNPTEATRKAKLKLLLVQR
Ga0190272_111519001	3300018429	Soil	NFWEMGLKVCAVSFTDMRGIKHSAEVEAESLYEAAVQGIRRLNQDPSIERIGRGTKLEIEVREPAVKHALSVEQVERWLAGATKNPTEATKKAKLKLLLVQR
Ga0190272_121953111	3300018429	Soil	MSVKQCTVSFVDIRGIAHAADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEIEVRDPSVKHVLSVEQVERWLAGATKNPTEATKKKKLK
Ga0190275_100673342	3300018432	Soil	MRRKTVISSREMSLKQCAVSFIDVRGIRHSADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEIEVRDPSVKHVLSVEQVERWLAGATKNPTEATKKKKLKLLLVQR
Ga0190275_102253452	3300018432	Soil	MSLKACAVSFTDVRGIKHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEIEVREPAVKHALSVEQVERWLAGATKNPTEATKKAKLKLLLVQR
Ga0190270_101597472	3300018469	Soil	MALKLCAVSFTDLRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPSARHVLSVDQVERWLAGATANPTEATKKKKLKLLLVQR
Ga0190270_102047872	3300018469	Soil	MGLKVCAVSFTDMRGIKHSAEVEAESLYEAAVQGIRRLNQDPWMDRIGPGTKLEVEVREPAVKHALSVEQVERWLAGATKNPTEATKKAKLKLLLVQR
Ga0190270_108613082	3300018469	Soil	HTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPSARHTLSVEQVERWLAGATANPTEATKKKKLKLLLVQR
Ga0190274_101911952	3300018476	Soil	MSPKACSVSFTDVRGIRHTTDVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEIEVRDPSTRHVLSVEQVERWLAGATKNPTEATKKAKLKLLLVQR
Ga0190271_103832513	3300018481	Soil	MSVKLCVVSFADLRGIKHSVEVEAESLYEAAVQGIRRLNQDPWIERIGPGTTLQVEVREPSATHAITVEQVERWLAGVTKNPTEATKKAKLKLLLVQR
Ga0190271_111873442	3300018481	Soil	MALKLCAVSFTDLRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPSARHVLSVDQVERWLAGATANPTEATKKKKLKLLLIQR
Ga0173481_108391641	3300019356	Soil	DVRGIRHTAEVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPAARHILSVEQVERWLAGATTNPTEATKKKKLKLLLVQR
Ga0173479_100749553	3300019362	Soil	MTLKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVCEPAARHILSVEQVERWLAGATTNPTE
Ga0193706_10883962	3300021339	Soil	MSVKQCSVSFTDVRGIRHSTDVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEIDVRDPSVKHVLSVEQVARWLASATKNPTEATKKAKLKLLLVQR
Ga0224510_100744052	3300022309	Sediment	MAKDVVSSLAMALKQCVVSFTDARGIRHSAEVEAESLYEAAVQGIRRLNQDPWIERIGPGTRLDIDVREPSAKHAVTVSQVERWLAGATTNPTEAIKKKKLKLLLVQR
Ga0207645_108133272	3300025907	Miscanthus Rhizosphere	VRGIRHSVDVDAESLYEAAVMGIRRLNDDPWLERIGAATVLEIEVRTPGTTHAITLQQVERWLAGATRNPYESMKKAKLKMLLVKG
Ga0207650_103874971	3300025925	Switchgrass Rhizosphere	IVPLRQCIVSFTDVRGVRHSVDVDAESLYEAAVIGIRRLNDDPWLERIGAATVLEVEVRAPGTTHTITLQQVERWLAGATRNPYESMKKAKLKMLLMRG
Ga0207701_100474514	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MALKRCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPSARHTLSVEQVERWLAGATANPTEATKKKKLKLLLVQR
Ga0207670_110161541	3300025936	Switchgrass Rhizosphere	VALRRCIVSFTDVRGIRHSVDVDAESLYEAAVMGIRRLNDDPWLERIGAATVLEIEVRTPGTTHAITLQQVERWLAGATRNPYESMKKAKLKMLLVKG
Ga0207639_119343581	3300026041	Corn Rhizosphere	VALRPCIVSFKDMRGVRHAAEVEAESLYEAAVLGVRRLNEDPWLEKIGPATILEIEVRAPGTTHTISLQQVERWLAGATKNPYESMKKAKLKMILVQG
Ga0209847_10173771	3300026276	Permafrost Soil	MLAAVALRPCIVSFKDLRGIRHSTDVEAESLYEAAVMGIRRLNEDPWLEKIGPATVLEIEVRNPGTTHAISLQQVERWLAGATTNPSEASKKVKLKMLLMRGPASATR
Ga0208185_10572992	3300027533	Soil	LKKRRNKSELCDKFLGMALKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPAAKHILSVEQVERWLAGATTNPTEATKKKKLKLLLVQR
Ga0209818_10968292	3300027637	Agricultural Soil	MSLKVCAVSFTDVRGIRHSAEVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEIEVREPSAKHVLTVDQVERWLAGATTNPTEATKKKKLKLLLVQR
Ga0209592_11867212	3300027731	Freshwater Sediment	MSLKKCAVSFTDVRGIRHSAEVEAESLYEAAVQGIRRLNQSPWIERIGRGTTLEVEVREPSAKHYITVEQIERWLTGATKSPTEATKKAKLKLLLVQR
Ga0209706_100047483	3300027818	Freshwater Sediment	MGVKVCSVSFKDVRGLRHTAEVEAESLYEAAVQGIRRLNQDPWIERIGPGTILDVEVREPSAKHSITVEQVERWLAGATKNPTEATKKAKLKLLLVRR
Ga0209974_103672381	3300027876	Arabidopsis Thaliana Rhizosphere	DVRGIKHSAEVEAESLYEAAVHGIRRLNQDPWIERIGPATKLEIEVREPSAKHVLSVHQVERWLAGTTTNPTEATKKKKLKLLLVQR
Ga0209486_105572451	3300027886	Agricultural Soil	MSLKACAVSFTDVRGIRHTAEVEADSLYEAAVQGIRRLNQDPWIERIGPGTKLEIEVREPAVKHTLSVEQVERWLAGATKNPTEATKKAKLKLLLVQR
Ga0207428_10000002712	3300027907	Populus Rhizosphere	MPLKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTRLEVEVREPSARHVVSVEQVERWLAGATANPTEATKKKKLKLLLVQR
Ga0209382_111649911	3300027909	Populus Rhizosphere	QCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTRLEVEVREPSARHVVSVEQVERWLAGATANPTEATKKKKLKLLLVQR
Ga0272482_100674081	3300028578	Soil	MPLKACAVSFTDVRGIRHTAEVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEIDVREPSVQHVLSVEQVERWLAGATKNPTEATKKAKLKLLLVQR
Ga0299907_105209601	3300030006	Soil	VVITSWEMALKACAVSFTDVRGIKHCAEVEAESLYEAAVQGMQRLNQDPWIERIGPGTKLEIEVRDPSVKHVLSVEQVERWLAGATKNPTEATKKAKLKLLLVQR
Ga0307511_102393382	3300030521	Ectomycorrhiza	MRGIRHSANVEAESLYEAAVPGIRRLSEDPWLEKIGAATVLEIEVRHPGTTHAVSLQQVERWLAGATKNPNEASKKVKLKMLLMKG
Ga0299914_103981041	3300031228	Soil	KHCAEVEAESLYEAAVQGIRRLNQDPWMERIGPGTKLEIEVRDPSVKHVLSVEQVERWLAGATKNPTEATKKAKLKLLLVQR
Ga0307408_1002671192	3300031548	Rhizosphere	MSLKKCAVSFTDVRGIRHSADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEIEVREPSAKHVLTVEQLERWLAGATPNPTEATKKKKLKLLLVQR
Ga0307408_1013281952	3300031548	Rhizosphere	CSVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEIEVRDPSTRHVLSVEQVERWLAGATKNPTEATKKAKLKLLLVQR
Ga0310904_103074311	3300031854	Soil	MSLKMCAVSFTDVRGIKHTADVEAESLYEAAVQGIRRLNHDPWIERIGPGTKLEIEVREPSAKHVLSVEQVERWLAGATTNPTEATKKKKLKLLLVQR
Ga0310900_105092421	3300031908	Soil	MALKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPSAKHIVSVEQVERWLAGATTNPTEATKKKKLKLLLVQR
Ga0310890_102019162	3300032075	Soil	MSLKMCAVSFTDVRGIKHTADVEAESLYEAAVQGIRRLNHDPWIERIGPATKLEIEVREPSAKHVLSVDQVERWLAGTTTNPTEATKKKKLKLLLVQR
Ga0315910_111318402	3300032144	Soil	MSLKACSVSFTDVRGIRHAADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEIEVRDPSTRHVLSVEQVERWLAGATKY
Ga0364945_0258615_105_401	3300034115	Sediment	MALKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPAAKHILSVEQVERWLAGATTNPTEATKKKKLKLLLVQR
Ga0364925_0301158_346_600	3300034147	Sediment	MALKQCAVSFTDVRGIRHTADVEAESLYEAAVQGIRRLNQDPWIERIGPGTKLEVEVREPSARHTLSVEQVERWLAGATANPTEA
Ga0372943_0512573_18_326	3300034268	Soil	MVATVTVRECIVSFRDARGIRHSAQVEAESLYEAAVLGVRRLNDDPWLEKIGPATVLEIEVRAPGVTHAISLQQIERWLAGATANPSESMKKAKLKLLLVQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063832

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences