Metagenome Family F063992

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063992
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	97 residues
Representative Sequence	MRGLWGIVAAIVFVLVGAGVLIGFASRPPARVWTFQYQVAGTEEWRDWRLYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENPALKESPGPPGRRR
Number of Associated Samples	108
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	31.78 %
% of genes near scaffold ends (potentially truncated)	37.98 %
% of genes from short scaffolds (< 2000 bps)	75.97 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (17.829 % of family members)
Environment Ontology (ENVO)	Unclassified (36.434 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.140 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 31.25% β-sheet: 16.41% Coil/Unstructured: 52.34%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00535	Glycos_transf_2	40.31
PF13561	adh_short_C2	31.78
PF00106	adh_short	6.20
PF00501	AMP-binding	6.20
PF13712	Glyco_tranf_2_5	2.33
PF07995	GSDH	1.55
PF08240	ADH_N	1.55
PF01575	MaoC_dehydratas	0.78
PF02502	LacAB_rpiB	0.78
PF02622	DUF179	0.78
PF02954	HTH_8	0.78
PF07879	PHB_acc_N	0.78
PF12762	DDE_Tnp_IS1595	0.78
PF04679	DNA_ligase_A_C	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	1.55
COG0698	Ribose 5-phosphate isomerase RpiB	Carbohydrate transport and metabolism [G]	0.78
COG1678	Putative transcriptional regulator, AlgH/UPF0301 family	Transcription [K]	0.78
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.78
COG5394	Polyhydroxyalkanoate (PHA) synthesis regulator protein, binds DNA and PHA	Signal transduction mechanisms [T]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	55.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.33 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	55.04 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	55.04 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	55.04 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	55.04 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101703166	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300002558\|JGI25385J37094_10003454	All Organisms → cellular organisms → Bacteria	5411	Open in IMG/M
3300002560\|JGI25383J37093_10002808	All Organisms → cellular organisms → Bacteria	5191	Open in IMG/M
3300002908\|JGI25382J43887_10003591	All Organisms → cellular organisms → Bacteria	7107	Open in IMG/M
3300002908\|JGI25382J43887_10191887	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	992	Open in IMG/M
3300002917\|JGI25616J43925_10176037	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	841	Open in IMG/M
3300004267\|Ga0066396_10008772	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300004267\|Ga0066396_10076183	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300005166\|Ga0066674_10037146	All Organisms → cellular organisms → Bacteria	2170	Open in IMG/M
3300005167\|Ga0066672_10215477	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300005171\|Ga0066677_10129004	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300005174\|Ga0066680_10339682	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300005175\|Ga0066673_10031503	All Organisms → cellular organisms → Bacteria	2551	Open in IMG/M
3300005177\|Ga0066690_10188205	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300005181\|Ga0066678_10585106	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	742	Open in IMG/M
3300005332\|Ga0066388_100067460	All Organisms → cellular organisms → Bacteria	3857	Open in IMG/M
3300005332\|Ga0066388_102437550	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	950	Open in IMG/M
3300005440\|Ga0070705_100318030	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1122	Open in IMG/M
3300005445\|Ga0070708_101611570	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	604	Open in IMG/M
3300005446\|Ga0066686_10099946	All Organisms → cellular organisms → Bacteria	1867	Open in IMG/M
3300005451\|Ga0066681_10007075	All Organisms → cellular organisms → Bacteria	5294	Open in IMG/M
3300005454\|Ga0066687_10311288	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	895	Open in IMG/M
3300005467\|Ga0070706_101952866	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	532	Open in IMG/M
3300005468\|Ga0070707_101051032	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	780	Open in IMG/M
3300005518\|Ga0070699_100821477	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	851	Open in IMG/M
3300005518\|Ga0070699_100845928	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	838	Open in IMG/M
3300005546\|Ga0070696_100383341	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300005558\|Ga0066698_10487904	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300005713\|Ga0066905_100866870	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300005764\|Ga0066903_100587898	All Organisms → cellular organisms → Bacteria	1924	Open in IMG/M
3300005764\|Ga0066903_105124765	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300005764\|Ga0066903_108508548	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	523	Open in IMG/M
3300005937\|Ga0081455_10112803	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2157	Open in IMG/M
3300005985\|Ga0081539_10000002	All Organisms → cellular organisms → Bacteria	601032	Open in IMG/M
3300006049\|Ga0075417_10014286	All Organisms → cellular organisms → Bacteria	3041	Open in IMG/M
3300006049\|Ga0075417_10209772	All Organisms → cellular organisms → Bacteria → Proteobacteria	924	Open in IMG/M
3300006173\|Ga0070716_101090155	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300006755\|Ga0079222_12192106	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	549	Open in IMG/M
3300006791\|Ga0066653_10202953	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1004	Open in IMG/M
3300006796\|Ga0066665_11427643	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	537	Open in IMG/M
3300006797\|Ga0066659_11519101	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	561	Open in IMG/M
3300006806\|Ga0079220_10294540	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	999	Open in IMG/M
3300006806\|Ga0079220_11167672	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	631	Open in IMG/M
3300006844\|Ga0075428_100006391	All Organisms → cellular organisms → Bacteria	13117	Open in IMG/M
3300006845\|Ga0075421_100059209	All Organisms → cellular organisms → Bacteria	4843	Open in IMG/M
3300006847\|Ga0075431_100004606	All Organisms → cellular organisms → Bacteria	13537	Open in IMG/M
3300006847\|Ga0075431_101804460	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	568	Open in IMG/M
3300006854\|Ga0075425_102594351	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	560	Open in IMG/M
3300006871\|Ga0075434_101069660	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	820	Open in IMG/M
3300006954\|Ga0079219_10101302	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300007255\|Ga0099791_10159852	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1055	Open in IMG/M
3300007258\|Ga0099793_10004700	All Organisms → cellular organisms → Bacteria	4878	Open in IMG/M
3300007258\|Ga0099793_10489222	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	611	Open in IMG/M
3300009012\|Ga0066710_100793650	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1451	Open in IMG/M
3300009137\|Ga0066709_100347433	All Organisms → cellular organisms → Bacteria	2036	Open in IMG/M
3300009147\|Ga0114129_10000182	All Organisms → cellular organisms → Bacteria	70001	Open in IMG/M
3300009147\|Ga0114129_13524593	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	500	Open in IMG/M
3300009162\|Ga0075423_10006416	All Organisms → cellular organisms → Bacteria	11050	Open in IMG/M
3300009807\|Ga0105061_1019520	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	897	Open in IMG/M
3300010046\|Ga0126384_10074825	All Organisms → cellular organisms → Bacteria	2418	Open in IMG/M
3300010046\|Ga0126384_11439703	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	644	Open in IMG/M
3300010046\|Ga0126384_12444573	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	506	Open in IMG/M
3300010047\|Ga0126382_10690286	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	855	Open in IMG/M
3300010048\|Ga0126373_11446974	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	753	Open in IMG/M
3300010303\|Ga0134082_10278894	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	697	Open in IMG/M
3300010326\|Ga0134065_10251668	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	659	Open in IMG/M
3300010359\|Ga0126376_10527069	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1100	Open in IMG/M
3300010360\|Ga0126372_10189457	All Organisms → cellular organisms → Bacteria	1699	Open in IMG/M
3300010360\|Ga0126372_12643741	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	553	Open in IMG/M
3300010361\|Ga0126378_11764358	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	704	Open in IMG/M
3300010398\|Ga0126383_10259265	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1712	Open in IMG/M
3300012198\|Ga0137364_10570698	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	852	Open in IMG/M
3300012200\|Ga0137382_10045500	All Organisms → cellular organisms → Bacteria	2716	Open in IMG/M
3300012202\|Ga0137363_10943230	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300012203\|Ga0137399_11395020	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	587	Open in IMG/M
3300012208\|Ga0137376_10468148	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1094	Open in IMG/M
3300012208\|Ga0137376_11636558	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	535	Open in IMG/M
3300012209\|Ga0137379_11812664	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	504	Open in IMG/M
3300012285\|Ga0137370_10936379	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	535	Open in IMG/M
3300012361\|Ga0137360_11075205	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	695	Open in IMG/M
3300012582\|Ga0137358_10255515	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300012582\|Ga0137358_10640228	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	712	Open in IMG/M
3300012685\|Ga0137397_10081296	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2357	Open in IMG/M
3300012918\|Ga0137396_10793812	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	696	Open in IMG/M
3300012922\|Ga0137394_10020990	All Organisms → cellular organisms → Bacteria	5236	Open in IMG/M
3300012972\|Ga0134077_10581385	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300012975\|Ga0134110_10308006	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	685	Open in IMG/M
3300014150\|Ga0134081_10279616	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	593	Open in IMG/M
3300014166\|Ga0134079_10109323	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1066	Open in IMG/M
3300015053\|Ga0137405_1137077	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	913	Open in IMG/M
3300015054\|Ga0137420_1026602	All Organisms → cellular organisms → Bacteria	4983	Open in IMG/M
3300015371\|Ga0132258_10182831	All Organisms → cellular organisms → Bacteria	5069	Open in IMG/M
3300017654\|Ga0134069_1000128	All Organisms → cellular organisms → Bacteria → Proteobacteria	15604	Open in IMG/M
3300018431\|Ga0066655_10000899	All Organisms → cellular organisms → Bacteria	10327	Open in IMG/M
3300018433\|Ga0066667_10199694	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300018468\|Ga0066662_10476046	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1128	Open in IMG/M
3300018482\|Ga0066669_10011815	All Organisms → cellular organisms → Bacteria	4500	Open in IMG/M
3300019789\|Ga0137408_1157583	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2671	Open in IMG/M
3300020170\|Ga0179594_10015275	All Organisms → cellular organisms → Bacteria	2232	Open in IMG/M
3300020170\|Ga0179594_10287587	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	622	Open in IMG/M
3300025939\|Ga0207665_10919596	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300026277\|Ga0209350_1057114	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300026296\|Ga0209235_1190313	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	742	Open in IMG/M
3300026297\|Ga0209237_1009398	All Organisms → cellular organisms → Bacteria	5852	Open in IMG/M
3300026307\|Ga0209469_1146812	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	522	Open in IMG/M
3300026309\|Ga0209055_1056056	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300026310\|Ga0209239_1031838	All Organisms → cellular organisms → Bacteria	2501	Open in IMG/M
3300026310\|Ga0209239_1145893	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300026313\|Ga0209761_1073378	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1805	Open in IMG/M
3300026323\|Ga0209472_1005731	All Organisms → cellular organisms → Bacteria	6607	Open in IMG/M
3300026326\|Ga0209801_1128398	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1083	Open in IMG/M
3300026331\|Ga0209267_1080455	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1410	Open in IMG/M
3300026333\|Ga0209158_1311307	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	543	Open in IMG/M
3300026342\|Ga0209057_1096809	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1201	Open in IMG/M
3300026351\|Ga0257170_1047616	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	594	Open in IMG/M
3300026527\|Ga0209059_1220729	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	636	Open in IMG/M
3300026537\|Ga0209157_1098225	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1396	Open in IMG/M
3300026551\|Ga0209648_10205061	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300027209\|Ga0209875_1008571	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1207	Open in IMG/M
3300027527\|Ga0209684_1018652	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1074	Open in IMG/M
3300027527\|Ga0209684_1059243	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	594	Open in IMG/M
3300027748\|Ga0209689_1182695	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300027873\|Ga0209814_10075699	All Organisms → cellular organisms → Bacteria	1417	Open in IMG/M
3300027873\|Ga0209814_10160505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	966	Open in IMG/M
3300027880\|Ga0209481_10102573	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300027880\|Ga0209481_10247206	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	898	Open in IMG/M
3300031716\|Ga0310813_10365847	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300031820\|Ga0307473_10405381	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	895	Open in IMG/M
3300034164\|Ga0364940_0031643	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1376	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.05%
Host-Associated	Host-Associated	13.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.05%
Plants	Host-Associated → Plants	13.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.33%
Floodplain	Environmental → Terrestrial → Floodplain	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.44%
Loam	Environmental → Terrestrial → Soil → Loam	16.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.63%
Sand	Environmental → Terrestrial → Soil → Sand	1.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.55%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	31.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.10%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.55%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	13.95%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.10%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.55%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.55%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027209	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1017031662	3300000364	Soil	MRGLWGIVAAIVFVLVGAGVLIGFASRPPARVWTFQYQVAGTEEWRDWRTYHNHNECEQARRFMKNLEDSQKRRLVATRHCAERENPALKEIPGPPGRRR*
JGI25385J37094_100034545	3300002558	Grasslands Soil	MRGLWGLVAAVVVVLLGAGILIGFASRPPARVWTFQYKVVGTEDWREWRLYPNFTDCEQARRFMKNLEDGQRRRLVETHHCSERENPALHQSPGPPSRRR*
JGI25383J37093_100028085	3300002560	Grasslands Soil	MRGLWGLVAAVVVVLLGAGILIGFASRPPARVWTFQYKVVGTEDWREWRLYPNFTDCEQARRFMKNLEDGQRRRLVETXHCSERENPALHQSPGPPSRRR*
JGI25382J43887_100035916	3300002908	Grasslands Soil	MRGLWGLVAAVVVVLLGAGILIGFASRPPARVWTFQYKVVGTEDWREWRLYPNFTDCEQARRFMKNLEDGQRRRLVETRHCSERENPALHQSPGPPSRRR*
JGI25382J43887_101918872	3300002908	Grasslands Soil	MRGLWGAVVAIVVVLVGAGILIGFASRPPARVWTFQYKVAGTDDWRDWRLYPNFTDCEQARRFMKNLEDGQRRRLVETRHCAERENPALK
JGI25616J43925_101760372	3300002917	Grasslands Soil	MRGVWGVGTAAVVVLLGMGVLIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNSNECESARRAMKNLEDGQKRRLVETRHCGERENPA
Ga0066396_100087722	3300004267	Tropical Forest Soil	MRGLWGIVAAIVFVLVGAGVLIGFASRPPARVWTFQYQVAGTDEWRDWRMYHNHNECEQARRFMKNLEDSQKRRLVATRHCAERENPALKEVPGPPGRRR*
Ga0066396_100761832	3300004267	Tropical Forest Soil	MRGLWGIVAAIVVVLVGAGVLIGFASRPPARVWTFQYQVAGTDEWREWRMYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENPALKESPGPPNRRR*
Ga0066674_100371463	3300005166	Soil	VRGLWGIVAAVLAVLMGAGVLIGFASRPPARLWTFQYRVAGTDDWRDWRLYPNHNECEQARRYMKNLEDGQKRRLVETHHCSERENPALKEAPRPPSRRR*
Ga0066672_102154772	3300005167	Soil	MRGVWGVGAAAVVVLLGMGILIGFASRPPARVWNFQYRVGGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPGPPSRRR*
Ga0066677_101290042	3300005171	Soil	MRRVWGVGAAAVVVLLGMGILIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPGPPSRRR*
Ga0066680_103396822	3300005174	Soil	MRGVWGVGAAAVVVLLGMGILIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPGPPSRRR*
Ga0066673_100315033	3300005175	Soil	MRRVWGVGVAAVVVLLGMGILIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPGPPSRRR*
Ga0066690_101882051	3300005177	Soil	MRGVWGVGAAAVVVLLGMGILIGFASRPPARVWNFQYRVGGTDEWRDWRLYPNFAECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPGPPSRRR*
Ga0066678_105851061	3300005181	Soil	MRRVWGVGAAAVVVLLGMGILIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPGPPSRRR
Ga0066388_1000674601	3300005332	Tropical Forest Soil	MRGLWGIVAAIVLVLVGAGVLIGFASRPPARVWTFQYQVAGTDEWREWRMYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENPALKETPGPPTRRR*
Ga0066388_1024375501	3300005332	Tropical Forest Soil	MRGLWGIVAAVVFVLVGVGVLIGFASRPPARLWTFQYQVAGTDEWRDWRLYHNHTECEQARRFMKNLEDGQKRRLVATRHCAERENPALKERPGPPTRRR*
Ga0070705_1003180302	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRGLWGIVAAIVFVLVGAGVLIGFASRPPARVWTFQYQVAGTEEWRDWRLYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENPALKESPGPPGRRR*
Ga0070708_1016115702	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRGLWSAVVAIVVVMIGAGILIGFASRPPARVWTFQYKVAGTEEWRDWRLYPNFSDCEQARRFMKYLEDGQRRRLVETHHCAERENPALKEAPAPPGRRR*
Ga0066686_100999463	3300005446	Soil	VRGLWSIVVAIVVVLVGAGILIGFASRPPARLWTFEYRVLGTESWRDWRLYPNHNECEQARRFMKNLEDGQKRRLVETHHCSERENPALKEAPGPSGRRR*
Ga0066681_100070751	3300005451	Soil	MRGVWGVGAAAVVVLLGMGILIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGERENP
Ga0066687_103112882	3300005454	Soil	RGVWGVGAAAVVVLLGMGILIGFASRPPARVWNFQYRVGGTDEWRDWRLYPNFAECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPGPPSRRR*
Ga0070706_1019528661	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRGLWGLVAAIVIVLLGAGILIGFASRPPARLWTFQYKVAGTEEWQDWRLYHAHTECEQARRYMKHLEDGQKRRLVETRHCGERENPALKESPQPPGRRR*
Ga0070707_1010510321	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRGLWGLVAAIVIVLLGAGILIGFASRPPARLWTFQYKVAGTEEWQDWRLYHAHTECEQARRYMKHLEDGQKRRLVETRHCGERENPALK
Ga0070699_1008214772	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	SSTVATRRPEMRGVWGVGAAAVAVLLGMGVLIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQRRRLVETRHCGERENPALNERPGPPSRRR*
Ga0070699_1008459282	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRGVWGVGAAAVVVLLGVGILIGFASRPPARVWTFQYKVVGTEEWRDWRLYPNFTECEGARRAMKNLEDGQKRRLVETRHCGERENP
Ga0070696_1003833412	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VRGLWGAIAAIVVVLVGAAILIGFASRPPARLWTFQYKVVDTEEWHDWRLYSNFNECEQARRFMKNLEDGLKRRLVDTKHCNERENPALKEKPAPPSRRR*
Ga0066698_104879042	3300005558	Soil	VRTLWAWVLLVVLVLVAAAVVIGFASRPPARLWTFQYQVVGTMDWRDWRLYPNHSDCEQARRFMKNLEDGQGRRLVITRHCGERANPALSEKSAPPRRRP*
Ga0066905_1008668702	3300005713	Tropical Forest Soil	MRGLWGIVAAIVFVLVGAGVLIGFASRPPARVWTFQYQVAGTDEWRDWRMYHNHNECEQARRFMKNLEDSQKRRLVATRHCAERENPALQELPGPPGRRR*
Ga0066903_1005878982	3300005764	Tropical Forest Soil	MRGLWGIVAAIVFVLVGAGVLIGFASRPPARVWTFQYQVAGTDEWRDWRMYHNHNECEQARRFMKNLEDSQKRRLVATRHCAERENPALKEVPRPPGRRR*
Ga0066903_1051247652	3300005764	Tropical Forest Soil	MRGLWGIVAAVVFVLVGAGILIGFASRPPARLWTFQYQVAGTDEWRDWRLYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENPALKERPGPPTRRR*
Ga0066903_1085085481	3300005764	Tropical Forest Soil	FVLVGAGVLIGFASRPPARVWTFQYQVAGTDEWREWRMYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENPALKESPGPPTRRR*
Ga0081455_101128033	3300005937	Tabebuia Heterophylla Rhizosphere	MRGLWGIVAAVVFVLVGAGVLIGFASRPPARLWTFQYQVAGTDEWRDWRLYHNHNECEQGRRFMKNLEDGQKRRLVATRQCAERENPALKEKPGPPTRRR*
Ga0081539_1000000235	3300005985	Tabebuia Heterophylla Rhizosphere	MRGLWGIVAAIVFVLVGAGVLIGFASRPPAHVWTFQYQVAGTEEWREWRMYHNHNECEQARRFMKNLEDGQKRRLVSTRHCAERENPALRETPGPPRRR*
Ga0075417_100142863	3300006049	Populus Rhizosphere	MRGLWGIVAAIVFVLVGAGVLIGFASRPPARVWTFQYQVAGTDEWRDWRMYHNHTECEQARRFMKNLEDSQKRRLVATRHCAERENPALKEVPGPPGRRR*
Ga0075417_102097722	3300006049	Populus Rhizosphere	MRGLWGFVAAIVVVLVGGGILIGFASRPPARLWTFQYKVVGTSEWRDWRLYPNNNECEQARRFVRDLEDGQNRRLVETGNCLERENPALKTSPGPPGRSR*
Ga0070716_1010901552	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRGLWGIVAAIVFVLVGAGVLIGFASRPPARVWTFQYQVAGTEEWRDWRMYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENPALKESPGPPGRRR*
Ga0079222_121921061	3300006755	Agricultural Soil	DVRGLWGAAFAILIVLLGAGILIGFASRPPARLWMFQYKVAGTDDWRDWRLYANFTECEQARRFMKNLEDGQRRRLVETRHCAERENPALKETPQPPGRRSR*
Ga0066653_102029532	3300006791	Soil	VLLGAGILIGFASRPPARVWTFQYKVVGTEDWREWRLYPNFTDCEQARRFMKNLEDGQRRRLVETHHCSERENPALHQSPGPPSRRR*
Ga0066665_114276431	3300006796	Soil	ARPCFSTAVTRRPDVRGLWGIVAAVLAVLMGAGVLIGFASRPPARLWTFQYRVAGTDDWRDWRLYPNHNECEQARRYMKNLEDGQKRRLVETHHCSERENPALKEAPRPPSRRR*
Ga0066659_115191012	3300006797	Soil	VRGLWGVVAAVVAVLVGAGVLIGFASRPPARLWTFQYRVAGTDDWRDWRLYPNHNECEQARRYMKNLEDGQKRRLVETHHCSERENPALKESPRPPSRRR*
Ga0079220_102945402	3300006806	Agricultural Soil	STAGTPPPDMRGLWGLSAAIVVVLVGAGILIGFASRPPARLWTFEYRVAGTEDWRDWRLYSNHNECEQGRRFMKNLEDAQKRRLVETRPCTERENPALKEAPQPPGRRR*
Ga0079220_111676721	3300006806	Agricultural Soil	SSSTAATPPPDVRGLWGAAFAILIVLLGAGILIGFASRPPARLWMFQYKVAGTDDWRDWRLYANFTECEQARRFMKNLEDGQRRRLVETRHCAERENPALKETPQPPGRRSR*
Ga0075428_1000063914	3300006844	Populus Rhizosphere	MRGLWGIVAAIVLVLVGAGVLIGFASRPPARVWTFQYQVAGTDEWREWRMYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENPALKESPGPPSRRW*
Ga0075421_1000592095	3300006845	Populus Rhizosphere	MRGLWGIVAAIVFVLVGAGILIGFASRPPAHVWTFQYQVAGTEEWREWRMYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENPALRETPGPPRRR*
Ga0075431_1000046069	3300006847	Populus Rhizosphere	MRGLWGFVAAIVVVLVGGGILIGFASRPPARLWTFQYKVVGTSEWRDWRLYPNNNECEQARRFVRDLEDGQSRRLVETSNCLERENPALKTSPGPPGRSR*
Ga0075431_1018044602	3300006847	Populus Rhizosphere	MRGLWGIVAAIVFVLVGAGVLIGFASRPPARVWTFQYQVAGTDEWRDWRMYHNHTECEQARRFMKNLEDSQKRRLVATRHCAERENPALKEIPGPPARRR*
Ga0075425_1025943512	3300006854	Populus Rhizosphere	MRGLWGIVAAVVFVLVGVGVLIGFASRPPARLWTFQYQVAGTDEWRDWRLYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENP
Ga0075434_1010696602	3300006871	Populus Rhizosphere	ILIGFASRPPAHVWTFQYQVAGTEEWREWRMYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENPALRETPGPPRRR*
Ga0079219_101013023	3300006954	Agricultural Soil	MRGLWGLSAAIVVVLVGAGILIGFASRPPARLWTFEYRVAGTEDWRDWRLYPNHNECEQGRRFMKNLEDAQKRRLVETRPCTERENPALKEAPQPPGRRR*
Ga0099791_101598521	3300007255	Vadose Zone Soil	VGAAAVVVLLGMGILIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPGPPSRRR*
Ga0099793_100047003	3300007258	Vadose Zone Soil	MRGVWGVGAAAVVVLLGMGVLIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPGPPSRRR*
Ga0099793_104892221	3300007258	Vadose Zone Soil	MRGLWGLVAAVVVVLLGAGILIGFASRPPARVWTFQYKVVGTEDWRDWRLYANHTDCEQARRFMKNLEDGQKRRLVETRHCGERENPALRQSPPGPPSRRR*
Ga0066710_1007936503	3300009012	Grasslands Soil	VRGLWSIVVAIVVVLVGAGILIGFASRPPARLWTFEYRVLGTESWRDWRLYPNHNECEQARRFMKNLEDGQKRRLVETRHCGERENPALKEVPAPPRPRR
Ga0066709_1003474333	3300009137	Grasslands Soil	MRGVWGVGAAAVVVLLGMGILIGFASRPPARVWNFQYRVGGTDEWRDWRLYPNFAECESARRAMKNLEDGQKRRLVETRHCGERENPALNER
Ga0114129_1000018237	3300009147	Populus Rhizosphere	MRGLWGIVAAIVFVLVGAGVLIGFASRPPARVWTFQYQVAGTDEWRDWRMYHNHTECEQARRFMKNLEDSQKRRLVVTRHCAERENPALKEVPGPPGRRR*
Ga0114129_135245932	3300009147	Populus Rhizosphere	MRGLWGIVAAIVFVLVGAGVLIGFASRPPARVWTFQYQVAGTDEWRDWRMYPNHNECEQARRFMKNLEDGQKRRLVATRHCAER
Ga0075423_1000641611	3300009162	Populus Rhizosphere	MRGLWGIMAAIVFVLVGAGVLIGFASRPPARVWTFQYQVAGTDEWRDWRMYHNHTECEQARRFMKNLEDSQKRRLVATRHCAERENPALKEVPGPPGRRR*
Ga0105061_10195202	3300009807	Groundwater Sand	MRGLWGLVAAVVIVLLGAGIMIGFASRPPARVWTFQYKVVGTEEWRDWRLYPNFTDCEQARRFMKHLEDGQRRRLVETHHCSERENPALTQSPGPPSRRR*
Ga0126384_100748252	3300010046	Tropical Forest Soil	MEGTRPLDMRGLWGIVAAVVFVLVGAGILIGFASRPPARLWTFQYQVAGTDEWRDWRLYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENPALKERPGPPTRRR*
Ga0126384_114397032	3300010046	Tropical Forest Soil	GVLIGFASRPPARVWTFQYQVAGTDEWREWRMYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENPALKESPGPPTRRR*
Ga0126384_124445731	3300010046	Tropical Forest Soil	PDMRGLWGIVAAIVFVLVGAGVLIGFASRPPARVWTFQYQVAGTDEWRDWRMYHNHNECEQARRFMKNLEDSQKRRLVATRHCAERENPALKEVPGPPGRRR*
Ga0126382_106902862	3300010047	Tropical Forest Soil	MRGLWGIVAAVVFVLVGAGILIGFASRPPARLWTFQYQVAGTDEWRDWRLYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERANPALKERPGPPTRRR*
Ga0126373_114469742	3300010048	Tropical Forest Soil	MWGIVAAIVFVLVGAGVLIGFASRPPARVWTFQYQVAGTDEWREWRMYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENPALKESPGPPTRRR*
Ga0134082_102788941	3300010303	Grasslands Soil	TRRPDVRGLWGIVAAVLAVLMGAGVLIGFASRPPARLWTFQYRVAGTDDWRDWRLYPNHNECEQARRYMKNLEDGQKRRLVETHHCSERENPALKEAPRPPSRRR*
Ga0134065_102516682	3300010326	Grasslands Soil	PDMRGLWGLVAAVVVVLLGAGILIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPGPPSRRR*
Ga0126376_105270692	3300010359	Tropical Forest Soil	MRGLWGIVAAIVFVLVGAGVLIGFASRPPARVWTFQYQVAGTDEWRDWRMYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENPALKEIPGPPARRR*
Ga0126372_101894571	3300010360	Tropical Forest Soil	MRGLWGIVAAIVVVLVGAGVLIGFASRPPARVWTFQYQVAGTDEWREWRMYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENPALKE
Ga0126372_126437412	3300010360	Tropical Forest Soil	RPPDMRGLWGIVAAIVVVLVGAGVLIGFASRPPARMWTFQYQVAGTDEWREWRMYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENPALKESPGPPNRRR*
Ga0126378_117643582	3300010361	Tropical Forest Soil	GAGVLIGFASRPPARVWTFQYQVAGTDEWRDWRMYHNHNECEQARRFMKNLEDSQKRRLVATRHCAERENPALKEVPGPPGRRR*
Ga0126383_102592652	3300010398	Tropical Forest Soil	MRWLWGIVAAVVFVLVGAGILIGFASRPPARLWTFQYQVAGTDEWRDWRLYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENPALKESPVPPTRRR*
Ga0137364_105706982	3300012198	Vadose Zone Soil	MRGLWGVVGAVLFVLVGAGILIGFASRPPARLWTFQYRVLGTEDWRDWRLYPNQTDCEQARRFMKNLEDGQKRRLVETRHCGERENPALKEVPAPPRPRR*
Ga0137382_100455001	3300012200	Vadose Zone Soil	MRGVWGVGAAAVVVLLGMGILIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGERENPALNERQGPPSRRR*
Ga0137363_109432302	3300012202	Vadose Zone Soil	MRGVWGVGAAAVVVLLGMGVLIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNSNECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPGPPSRRR*
Ga0137399_113950201	3300012203	Vadose Zone Soil	MRGLWGLVAAVVVVLLGAGILIGFASRPPARVWTFQYKVFGTEDWRDWRLYPNFTDCEQARRFMKNLEDGQRRRLVETRHCSERENPALHQSPGPPSRRR*
Ga0137376_104681483	3300012208	Vadose Zone Soil	MRGVWGVGAAAVVVLLGMGILIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGERENPAL
Ga0137376_116365581	3300012208	Vadose Zone Soil	VRGLWGIVAAVLAVLMGAGVLIGFASRPPARLWTFQYRVAGTDDWRDWRLYPNHNECEQARRYMKNLEDGQKRRLVETHHCSERENPALKEVPAPPRPRR*
Ga0137379_118126642	3300012209	Vadose Zone Soil	GLVAAVVVVLLGAGILIGFASRPPARVWTFQYKVVGTEDWREWRLYPNFTDCEQARRFMKNLEDGQRRRLVETHHCSERENPALHQSPGPPSRRR*
Ga0137370_109363792	3300012285	Vadose Zone Soil	AVLMGAGVLIGFASRPPARLWTFQYRVAGTDDWRDWRLYPNHNECEQARRYMKNLEDGQKRRLVETHHCSERENPALKEAPRPPSRRR*
Ga0137360_110752052	3300012361	Vadose Zone Soil	VVVVLLGAGILIGFASRPPARVWTFQYKVVGTEDWREWRLYPNFTDCEQARRFMKNLEDGQRRRLVETHHCSERENPALHQSPGPPSRRR*
Ga0137358_102555153	3300012582	Vadose Zone Soil	MRGVWGVGAAAVVVLLGMGILIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPG
Ga0137358_106402282	3300012582	Vadose Zone Soil	MRGVWGVGAAAVVVLLGMGVLIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNSNECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPG
Ga0137397_100812963	3300012685	Vadose Zone Soil	MRGLWGLVAAVVVVLLGAGILIGFASRPPARVWTFQYKVVGTEDWREWRLYPNLTDCEQARRFMKNLEDGQKRRLVETRHCSERENPALRQSPGPPSRRR*
Ga0137396_107938122	3300012918	Vadose Zone Soil	MGILIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPGPPSRRR*
Ga0137394_100209903	3300012922	Vadose Zone Soil	MRGLWGLVAAVVVVLLGAGILIGFASRPPARVWTFQYKVVGTEDWREWRLYPNLTDCEQARRFMKNLEDGQKRRLVETRHCSERENPALHQSPGPPSRRR*
Ga0134077_105813852	3300012972	Grasslands Soil	VRTLWAWVLLVVLVLVAAAVVIGFASRPPARLWTFQYQVVGTMDWRDWRLYPNHSDCEQARRFMKNLEDGQGRRLVITRHCGERANPALSEKSVPPRRRP*
Ga0134110_103080062	3300012975	Grasslands Soil	MRGVWGVGAAAVVVLLGMGILIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPGPPSRR
Ga0134081_102796162	3300014150	Grasslands Soil	AVVVVLLGAGILIGFASRPPARVWTFQYKVVGTEDWREWRLYPNFTDCEQARRFMKNLEDGQRRRLVETHHCSERQNPALHQSPGPPSRRR*
Ga0134079_101093232	3300014166	Grasslands Soil	VRGLWGIVAAVLAVLMGAGVLIGFASRPPARLWAFQYRVAGTDDWRDWRLYPNHNECEQARRYMKNLEDGQKRRLVETHHCSERENPALKEAPRPPSRRR*
Ga0137405_11370771	3300015053	Vadose Zone Soil	MRGVWGVGAAAVVVLLGMGILIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGERENPALNER
Ga0137420_10266021	3300015054	Vadose Zone Soil	MRGVWGVGAAAVVVLLGMGILIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGERENPALNETEREARPAE
Ga0132258_101828317	3300015371	Arabidopsis Rhizosphere	MRGLWGVVAAIVVVLVGVGILIGFASRPPARLWTFQYRVIDTQDWREWRLYPTQNECEQARRLMKHLEDGQKRRLVETQHCAEREN
Ga0134069_100012817	3300017654	Grasslands Soil	GAGILIGFASRPPARVWTFQYKVVGTEDWREWRLYPNFTDCEQARRFMKNLEDGQRRRLVETHHCSERENPALHQSPGPPSRRR
Ga0066655_100008993	3300018431	Grasslands Soil	MRGLWGLVAAVVVVLLGAGILIGFASRPPARVWTFQYKVVGTEDWREWRLYPNFTDCEQARRFMKNLEDGQRRRLVETHHCSERENPALHQSPGPPSRRR
Ga0066667_101996943	3300018433	Grasslands Soil	MRGVWGVGAAAVVVLLGMGILIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPGPPSRRR
Ga0066662_104760462	3300018468	Grasslands Soil	MRGLWGLVAAVVVVLLGAGILIGFASRPPARVWTFQYKVVGTEDWREWRLYPNFTDCEQARRFMKNLEDGQRRRLVETRHCSERENPALHQSPGPPSRRR
Ga0066669_100118153	3300018482	Grasslands Soil	VRGLWGIVAAVLAVLMGAGVLIGFASRPPARLWTFQYRVAGTDDWRDWRLYPNHNECEQARRYMKNLEDGQKRRLVETHHCSERENPALKEAPRPPSRRR
Ga0137408_11575833	3300019789	Vadose Zone Soil	MRGLWGLVAAVVVVLLGAGILIGFASRPPARVWTFQYKVVGTEDWREWRLYPNLTDCEQARRFMKNLEDGQKRRLVETRHCSERENPALHQSPGPPSRRR
Ga0179594_100152752	3300020170	Vadose Zone Soil	MRGVWGVGAAAVVVLLGMGVLIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPGPPSRRR
Ga0179594_102875872	3300020170	Vadose Zone Soil	MRGLWGLVAAVVVVLLGAGILIGFASRPPARVWTFQYKVVGTEDWREWRLYPNLTDCEQARRFMKNLEDGQKRRLVETRHCSERENPALRQSPGPPSRRR
Ga0207665_109195962	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRGLWGIVAAIVFVLVGAGVLIGFASRPPARVWTFQYQVAGTEEWRDWRMYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENPALKESPGPPGRRR
Ga0209350_10571142	3300026277	Grasslands Soil	MRGGWGVGAAAVVVLLGMGILIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPGPPSRRR
Ga0209235_11903131	3300026296	Grasslands Soil	VRGLWSIVVAIVVVLVGAGILIGFASRPPARLWTFEYRVLGTESWRDWRLYPNHNECEQARRFMKNLEDGQKRRLVETHHCSERENPAL
Ga0209237_10093981	3300026297	Grasslands Soil	MRGLWGAVVAIVVVLVGAGILIGFASRPPARVWTFQYKVAGTDDWRDWRLYPNFTDCEQARRFMKNLEDGQRRRLVETRHCAERENPALKES
Ga0209469_11468121	3300026307	Soil	VLAVLMGAGVLIGFASRPPARLWTFQYRVAGTDDWRDWRLYPNHNECEQARRYMKNLEDGQKRRLVETHHCSERENPALKEAPRPPSRRR
Ga0209055_10560562	3300026309	Soil	MRGVWGVGAAAVVVLLGMGILIGFASRPPARVWNFQYRVGGTDEWRDWRLYPNFAECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPGPPSRRR
Ga0209239_10318383	3300026310	Grasslands Soil	MRGLWGLVAAVVVVLLGAGILIGFASRPPARVWTFQYKVVGTEDWREWRLYPNFTDCEQARRFMKNLEDGQRRRLVETHHCSERENPALHQSPG
Ga0209239_11458932	3300026310	Grasslands Soil	MRGVWGVGAAAVVVLLGMGILIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRLVETRHCGERENPALNERPGPPSRRR
Ga0209761_10733782	3300026313	Grasslands Soil	MRGLWGAVVAIVVVMVGAGILIGFASRPPARVWTFQYKVAGTDDWRDWRLYPNFTDCEQARRFMKNLEDGQRRRLVETRHCAERENPALKESPAPPGRRR
Ga0209472_10057311	3300026323	Soil	MRGLWGLVAAVVVVLLGAGILIGFASRPPARVWTFQYKVVGTEDWREWRLYPNFTDCEQARRFMNNLEDGQRRRLVETHHCS
Ga0209801_11283981	3300026326	Soil	MRGVWGVGAAAVVVLLGMGILIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPGP
Ga0209267_10804553	3300026331	Soil	VRGLWGIVAAVLAVLMGAGVLIGFASRPPARLWTFQYRVAGTDDWRDWRLYPNHNECEQARRYMKNLEDGQKRRLVETHHCSERENPALKEAPRPPSRGSARAR
Ga0209158_13113071	3300026333	Soil	MRGVWGVGAAAVVVLLGMGILIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCG
Ga0209057_10968091	3300026342	Soil	LAVLMGAGVLIGFASRPPARLWTFQYRVAGTDDWRDWRLYPNHNECEQARRYMKNLEDGQKRRLVETHHCSERENPALKEAPRPPSRRR
Ga0257170_10476162	3300026351	Soil	MRGVWGVGAAAVAVLLGMGVLIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGEREN
Ga0209059_12207292	3300026527	Soil	MRGVWGVGAAAVVVLLGMGILIGFASRPPARVWNFQYRVGGTDEWRDWRLYPNFAECESARRAMKNLEDGQKRRLVETRHCGERENP
Ga0209157_10982253	3300026537	Soil	VRGLWSIVVAIVVVLVGAGILIGFASRPPARLWTFEYRVLGTESWRDWRLYPNHNECEQARRFMKNLEDGQKRRLVETHHCSERENPALKEAPGPSGRRR
Ga0209648_102050612	3300026551	Grasslands Soil	MRGVWGVGAAAVVVLLGMGILIGFASRPPARVWNFEYKVVGTDEWRDWRLYPNFAECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPGPPSRRR
Ga0209875_10085712	3300027209	Groundwater Sand	MRGLWGLVAAVVIVLLGAGIMIGFASRPPARVWTFQYKVVGTEEWRDWRLYPNFTDCEQARRFMKHLEDGQRRRLVETHHCSERENPALTQSPGPPSRRR
Ga0209684_10186522	3300027527	Tropical Forest Soil	MRGLWGIVAAIVFVLVGAGVLIGFASRPPARVWTFQYQVAGTDEWRDWRMYHNHNECEQARRFMKNLEDSQKRRLVATRHCAERENPALKEVPGPPGRRR
Ga0209684_10592432	3300027527	Tropical Forest Soil	MRGLWGIVAAIVVVLVGAGVLIGFASRPPARVWTFQYQVAGTDEWREWRMYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENPALKESPGPPNRRR
Ga0209689_11826952	3300027748	Soil	VGAAAVVVLLGMGILIGFASRPPARVWNFQYRVGGTDEWRDWRLYPNFAECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPGPPSRRR
Ga0209814_100756992	3300027873	Populus Rhizosphere	MRGLWGIVAAIVFVLVGAGVLIGFASRPPARVWTFQYQVAGTDEWRDWRMYHNHTECEQARRFMKNLEDSQKRRLVATRHCAERENPALKEVPGPPGRRR
Ga0209814_101605052	3300027873	Populus Rhizosphere	MRGLWGFVAAIVVVLVGGGILIGFASRPPARLWTFQYKVVGTSEWRDWRLYPNNNECEQARRFVRDLEDGQNRRLVETGNCLERENPALKTSPGPPGRSR
Ga0209481_101025732	3300027880	Populus Rhizosphere	MRGLWGIVAAIVLVLVGAGVLIGFASRPPARVWTFQYQVAGTDEWREWRMYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENPALKESPGPPSRRW
Ga0209481_102472062	3300027880	Populus Rhizosphere	MRGLWGIVAAIVFVLVGAGILIGFASRPPAHVWTFQYQVAGTEEWREWRMYHNHNECEQARRFMKNLEDGQKRRLVATRHCAERENPALRETPGPPRRR
Ga0310813_103658472	3300031716	Soil	MRGLWGVVAAIVVVLVGVGILIGFASRPPARLWTFQYRVIDTQDWREWRLYPTQNECEQARRLMKHLEDGHKRRLVETQHCAERENPAFKELPAPPGRRG
Ga0307473_104053812	3300031820	Hardwood Forest Soil	MRGVWGVGAAAVAVLLGMGVLIGFASRPPARVWNFQYKVVGTDEWRDWRLYPNFNECESARRAMKNLEDGQKRRLVETRHCGERENPALNERPGPPSRRR
Ga0364940_0031643_1034_1312	3300034164	Sediment	MAIVVALVGAGILIGFASRPPARLWTFQYKVAGTEEWRDWRYHSNFTDCEQARRFMKDLEDSEKRRLVETRHCSERENPALKESPAPPGRRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063992

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences