Metagenome / Metatranscriptome Family F064039

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F064039
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	59 residues
Representative Sequence	VEDEGVFTMPWSATITYRRGREAWREVVCAENTQELALAGRDAAVPHADKPDF
Number of Associated Samples	98
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.38 %
% of genes near scaffold ends (potentially truncated)	92.25 %
% of genes from short scaffolds (< 2000 bps)	93.02 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (79.070 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.481 % of family members)
Environment Ontology (ENVO)	Unclassified (29.457 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.566 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.11% β-sheet: 14.81% Coil/Unstructured: 74.07%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF12694	cpYpsA	13.18
PF03734	YkuD	5.43
PF03401	TctC	4.65
PF01292	Ni_hydr_CYTB	2.33
PF12706	Lactamase_B_2	1.55
PF07690	MFS_1	1.55
PF00033	Cytochrome_B	0.78
PF00497	SBP_bac_3	0.78
PF12071	DUF3551	0.78
PF01177	Asp_Glu_race	0.78
PF01522	Polysacc_deac_1	0.78
PF00271	Helicase_C	0.78
PF12146	Hydrolase_4	0.78
PF03069	FmdA_AmdA	0.78
PF03567	Sulfotransfer_2	0.78
PF01135	PCMT	0.78
PF01066	CDP-OH_P_transf	0.78
PF03972	MmgE_PrpD	0.78
PF13531	SBP_bac_11	0.78
PF01977	UbiD	0.78
PF01327	Pep_deformylase	0.78
PF00857	Isochorismatase	0.78
PF03928	HbpS-like	0.78
PF01425	Amidase	0.78
PF02219	MTHFR	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	5.43
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	5.43
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	4.65
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	2.33
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	2.33
COG3038	Cytochrome b561	Energy production and conversion [C]	2.33
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	2.33
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	2.33
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.78
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.78
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	0.78
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.78
COG0685	5,10-methylenetetrahydrofolate reductase	Amino acid transport and metabolism [E]	0.78
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.78
COG1290	Cytochrome b subunit of the bc complex	Energy production and conversion [C]	0.78
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.78
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.78
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.78
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.78
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.78
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.78
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.78
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.07 %
Unclassified	root	N/A	20.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.07 %
Unclassified	root	N/A	20.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.07 %
Unclassified	root	N/A	20.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	38.76 %
Unclassified	root	N/A	20.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.38 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	35.66 %
Unclassified	root	N/A	20.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.28 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.66 %
Unclassified	root	N/A	20.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.20 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.33 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.78 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.66 %
Unclassified	root	N/A	20.93 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.33 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.66 %
Unclassified	root	N/A	20.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.33 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.66 %
Unclassified	root	N/A	20.93 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	3.10 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.33 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1.55 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101679381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300004092\|Ga0062389_100348514	Not Available	1576	Open in IMG/M
3300004092\|Ga0062389_100737632	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300004152\|Ga0062386_101238567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	620	Open in IMG/M
3300004268\|Ga0066398_10188147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	539	Open in IMG/M
3300005332\|Ga0066388_100195023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2642	Open in IMG/M
3300005332\|Ga0066388_101158254	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300005332\|Ga0066388_102574864	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300005332\|Ga0066388_107432524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300005332\|Ga0066388_107471079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300005444\|Ga0070694_100451435	All Organisms → cellular organisms → Bacteria → Proteobacteria	1015	Open in IMG/M
3300005764\|Ga0066903_101535129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1259	Open in IMG/M
3300005764\|Ga0066903_106000246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	636	Open in IMG/M
3300005764\|Ga0066903_107358560	Not Available	569	Open in IMG/M
3300005764\|Ga0066903_108650584	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300006028\|Ga0070717_10725905	Not Available	903	Open in IMG/M
3300006162\|Ga0075030_100718351	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300006172\|Ga0075018_10677984	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300006173\|Ga0070716_101823013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300006174\|Ga0075014_100394487	Not Available	753	Open in IMG/M
3300006893\|Ga0073928_10752169	Not Available	676	Open in IMG/M
3300007255\|Ga0099791_10009011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4138	Open in IMG/M
3300007788\|Ga0099795_10083243	All Organisms → cellular organisms → Bacteria → Acidobacteria	1228	Open in IMG/M
3300009038\|Ga0099829_10821130	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300009089\|Ga0099828_10440177	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300009090\|Ga0099827_11983932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300009521\|Ga0116222_1552700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300009525\|Ga0116220_10112136	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300009672\|Ga0116215_1480432	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300009826\|Ga0123355_10907053	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300010043\|Ga0126380_11433460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300010046\|Ga0126384_10776492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300010046\|Ga0126384_12102221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300010048\|Ga0126373_12419394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300010162\|Ga0131853_11150256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300010341\|Ga0074045_10986967	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300010358\|Ga0126370_12662853	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300010379\|Ga0136449_103225533	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300010398\|Ga0126383_10555922	Not Available	1214	Open in IMG/M
3300010398\|Ga0126383_10687882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1100	Open in IMG/M
3300010403\|Ga0134123_12627703	Not Available	571	Open in IMG/M
3300011120\|Ga0150983_10213634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300012096\|Ga0137389_10526265	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300012189\|Ga0137388_11163375	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300012199\|Ga0137383_11136720	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300012208\|Ga0137376_10889663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300012363\|Ga0137390_11636018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300012924\|Ga0137413_10579170	Not Available	837	Open in IMG/M
3300012925\|Ga0137419_11334041	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300012927\|Ga0137416_12209945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300012971\|Ga0126369_10211539	Not Available	1879	Open in IMG/M
3300012971\|Ga0126369_10741390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1062	Open in IMG/M
3300012971\|Ga0126369_11707953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	719	Open in IMG/M
3300012971\|Ga0126369_11867924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	689	Open in IMG/M
3300012971\|Ga0126369_13565530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300014501\|Ga0182024_10938280	Not Available	1039	Open in IMG/M
3300014838\|Ga0182030_10523878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1174	Open in IMG/M
3300015245\|Ga0137409_11262605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300016270\|Ga0182036_10919019	Not Available	718	Open in IMG/M
3300016294\|Ga0182041_11424753	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300016294\|Ga0182041_11509573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300016341\|Ga0182035_11089042	Not Available	711	Open in IMG/M
3300016387\|Ga0182040_11701618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300016404\|Ga0182037_11749600	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300016422\|Ga0182039_10347021	Not Available	1245	Open in IMG/M
3300016422\|Ga0182039_11471518	Not Available	620	Open in IMG/M
3300016422\|Ga0182039_12200070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300016445\|Ga0182038_12061200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300017823\|Ga0187818_10277500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300017947\|Ga0187785_10304572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300017961\|Ga0187778_10440326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	859	Open in IMG/M
3300017970\|Ga0187783_10034902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3724	Open in IMG/M
3300017970\|Ga0187783_10059964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2806	Open in IMG/M
3300017972\|Ga0187781_10246196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1265	Open in IMG/M
3300017974\|Ga0187777_11425378	Not Available	512	Open in IMG/M
3300018058\|Ga0187766_11231141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300018062\|Ga0187784_10086187	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2553	Open in IMG/M
3300018062\|Ga0187784_10499856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	980	Open in IMG/M
3300018062\|Ga0187784_11467100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300021086\|Ga0179596_10032088	All Organisms → cellular organisms → Bacteria → Acidobacteria	2034	Open in IMG/M
3300021170\|Ga0210400_10243092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1471	Open in IMG/M
3300021178\|Ga0210408_10392174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1106	Open in IMG/M
3300021178\|Ga0210408_10775550	Not Available	752	Open in IMG/M
3300021384\|Ga0213876_10788662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	506	Open in IMG/M
3300021405\|Ga0210387_11532683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	569	Open in IMG/M
3300022527\|Ga0242664_1048347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	770	Open in IMG/M
3300026345\|Ga0257148_1013769	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300026369\|Ga0257152_1022845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300026494\|Ga0257159_1021926	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300026507\|Ga0257165_1085981	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300026514\|Ga0257168_1025470	All Organisms → cellular organisms → Bacteria → Acidobacteria	1245	Open in IMG/M
3300027821\|Ga0209811_10334966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300027854\|Ga0209517_10205978	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300030019\|Ga0311348_11293655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300031545\|Ga0318541_10414784	Not Available	753	Open in IMG/M
3300031545\|Ga0318541_10442063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	727	Open in IMG/M
3300031545\|Ga0318541_10485696	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	691	Open in IMG/M
3300031573\|Ga0310915_10402055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	973	Open in IMG/M
3300031719\|Ga0306917_11216707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300031719\|Ga0306917_11406442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300031744\|Ga0306918_10422047	Not Available	1041	Open in IMG/M
3300031763\|Ga0318537_10307269	Not Available	587	Open in IMG/M
3300031770\|Ga0318521_10520433	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300031781\|Ga0318547_10739848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300031833\|Ga0310917_10699092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300031893\|Ga0318536_10128269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1284	Open in IMG/M
3300031910\|Ga0306923_12573262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300031941\|Ga0310912_10828770	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300031942\|Ga0310916_10659544	Not Available	887	Open in IMG/M
3300031942\|Ga0310916_10738452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	832	Open in IMG/M
3300031945\|Ga0310913_10827108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300031945\|Ga0310913_11166974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300031954\|Ga0306926_12056661	Not Available	640	Open in IMG/M
3300032035\|Ga0310911_10764377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300032059\|Ga0318533_11118803	Not Available	577	Open in IMG/M
3300032076\|Ga0306924_11725270	Not Available	655	Open in IMG/M
3300032076\|Ga0306924_12394548	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300032090\|Ga0318518_10589754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300032160\|Ga0311301_10787278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1310	Open in IMG/M
3300032160\|Ga0311301_12681586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300032261\|Ga0306920_103885752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300032261\|Ga0306920_104353396	Not Available	508	Open in IMG/M
3300032515\|Ga0348332_12774349	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300032892\|Ga0335081_10343226	All Organisms → cellular organisms → Bacteria → Proteobacteria	1951	Open in IMG/M
3300033289\|Ga0310914_11100473	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300033289\|Ga0310914_11241966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	647	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.67%
Host-Associated	Host-Associated	2.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.70%
Aquatic	Environmental → Aquatic	6.98%
Arthropoda	Host-Associated → Arthropoda	1.55%
Plants	Host-Associated → Plants	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.15%
Freshwater	Environmental → Aquatic → Freshwater	3.88%
Sediment	Environmental → Aquatic → Sediment	2.33%
Digestive System	Host-Associated → Arthropoda → Digestive System	1.55%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.78%
Peat	Environmental → Terrestrial → Peat	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.89%
Loam	Environmental → Terrestrial → Soil → Loam	12.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.33%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	1.55%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.08%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.30%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.33%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.55%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	1.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.78%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.30%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.75%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.43%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.10%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.33%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	1.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.78%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.78%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.78%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.78%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.78%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026345	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-A	Environmental	Open in IMG/M
3300026369	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-A	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1016793811	3300002245	Forest Soil	AGSAPDYSYRGKHLQLHFTVEDEGVFTMPWSATITYRRGRETWREVVCAENTRELALAGRAAAVPTADKLDF*
Ga0062389_1003485144	3300004092	Bog Forest Soil	FTVEDEGVFTMPWSATITYRRGAEAWREVVCAENMRELAIAGRGSAVPTANQPDF*
Ga0062389_1007376323	3300004092	Bog Forest Soil	EDEGVFTMPWSATITYRRGAEAWREVVCAENTRELTIAGRAAAVPTANEPDF*
Ga0062386_1012385672	3300004152	Bog Forest Soil	VEDDGVFTMPWTATITYRRGFEAWREIVCAENTRELAIAGRGNAVPTADKPDF*
Ga0066398_101881471	3300004268	Tropical Forest Soil	VEDEGVFTMPWSATITYRRGREAWREVVCAENTQELALAGRDAAVPHADKPDF*
Ga0066388_1001950233	3300005332	Tropical Forest Soil	LQFTVEDEGVFTMPWSATITYRRGREAWREVVCTENTQELMLAGRDAAVPHADKPDF*
Ga0066388_1011582542	3300005332	Tropical Forest Soil	MPWSATLTYRRGLEAWREVVCAENTLELALAGRAAAVPTANRPDF*
Ga0066388_1025748641	3300005332	Tropical Forest Soil	YRGKHLQLQFTVEDDGVFTMPWSATITYRRGVETWREVVCAENTRELAIAGRGAAVPTADKPDF*
Ga0066388_1074325241	3300005332	Tropical Forest Soil	GVFTMPWSATITYRRGKEDWREVVCPENKQELAIAGRGAAVPTANKPDF*
Ga0066388_1074710792	3300005332	Tropical Forest Soil	LQFTVEDEGVFTMPWSATITYRRGREAWREVVCTENTQELVLAGRDAAVPHADKPDF*
Ga0070694_1004514352	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	YKGKHLQLEFTVEDEGVFTMPWRATITYRRGREEWREVVCAENNLEQTFAGRGAAIPTANRPDF*
Ga0066903_1015351291	3300005764	Tropical Forest Soil	VFTMPWSATITYRRGREAWREVVCTENTQELMLAGRDAAVPHADKPDF*
Ga0066903_1060002461	3300005764	Tropical Forest Soil	GADAGSAPDYSYRGKHLQLQFTVEDEGVFTMPWSATITYRRGREAWREVVCAENTQELALAGRDAAVPHADKPDF*
Ga0066903_1073585601	3300005764	Tropical Forest Soil	EGVFTMPWSATITYRRGRETWREVVCPENLQELALAGRDSAVPIAHTPDF*
Ga0066903_1086505841	3300005764	Tropical Forest Soil	FTVEDDGVFTMPWSATITYRRGREEWREVVCPENMQELVLAGRAAAVPTAHKPDF*
Ga0070717_107259053	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	ATITYRRGAEAWREVVCAENTRELAIAGRAAAVPTANQPDF*
Ga0075030_1007183511	3300006162	Watersheds	DQGVFTMPWAATITYRPGIEAWREVVCPENTLELDLAGRGTAIPVATGLDF*
Ga0075018_106779841	3300006172	Watersheds	TMPWSATVTYRRGIEEWREVVCAENTRELTVGGTAVTVPRADKPDF*
Ga0070716_1018230132	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	TVEDEGVFTMPWTATITYRRGREAWREVVCAENTRELAIAGRAAAVPRADKPDF*
Ga0075014_1003944871	3300006174	Watersheds	RGKEAWREIVCPENTRELAFAGRDARIPTADKPDF*
Ga0073928_107521691	3300006893	Iron-Sulfur Acid Spring	NLRPGGGADAGSAPDYSYRGKHLQLHFTVEDEGVFTMLWSATITYRRGRETWREVVCAENTRELALAGRAAAVPTADKPDF*
Ga0099791_100090111	3300007255	Vadose Zone Soil	APDYSYRGKHLQLLFTVEDEGVFTMPWSATITYRRGREAWREVVCAENLQELVLAGRDTAVPRANKPDF*
Ga0099795_100832431	3300007788	Vadose Zone Soil	APDYSYRGKHLQLHFTVEDEGVFTMPWSATITYRRGLEAWREVVCAENLQELVLAGRDTAVPRANKPDF*
Ga0099829_108211301	3300009038	Vadose Zone Soil	VEDAGVFTMPWSATITYRRGAEAWREVVCAENTRELAIAGRDAAVPRADKPDF*
Ga0099828_104401773	3300009089	Vadose Zone Soil	WSATITYRRGAEAWREVVCAENTLELAIAGRDAAVPRADKSDF*
Ga0099827_119839322	3300009090	Vadose Zone Soil	RENRRPPGGADAGSAPDYSYRGKHLQLHFTVEDEGVFTMPWSATITYRRGAEAWREVVCAENTRELAIAGRDAAVPTAHQPDF*
Ga0116222_15527002	3300009521	Peatlands Soil	LPVARRWGKHLQLRFTVEDEGVFTMPWTATITYRRGIEAWREVVCPENTRELAIAGRAAAVPTADKPDF*
Ga0116220_101121361	3300009525	Peatlands Soil	QFTVEDEGVFTMPWSATITYRRGREAWREVVCAENTRELDIAGRDAAVPRADKPDF*
Ga0116215_14804322	3300009672	Peatlands Soil	KLLQLQFTVEDEGVFTMPWSATITYRRGREAWREVVCAENTRELAIAGRDTAVPRADKPDF*
Ga0123355_109070531	3300009826	Termite Gut	TYRRARETWREVVCAENLQELTLAGRDSAVPHAEKPDF*
Ga0126380_114334601	3300010043	Tropical Forest Soil	FTVEDEGVFTMPWSATITYRRGAEAWREVVCAENMRELAMAGRDAAVPTANKPDF*
Ga0126384_107764922	3300010046	Tropical Forest Soil	GSAPDYSYRGKHLQLQFTVEDEGVFTMPWSATITYRRGREAWREVVCAENTQELALAGRDAAVPHADQPDF*
Ga0126384_121022212	3300010046	Tropical Forest Soil	PGGADAGSAPDYSYRGKHLQLHFTVEDEGVFTTPWSATITYRRGREAWREVVCAENLQELVLAGRDTAVPRANKPDF*
Ga0126373_124193942	3300010048	Tropical Forest Soil	VEDEGVFTMPWSATITYRRGREEWREVVCAENMREQAIAGRGPAVPTAHKPDF*
Ga0131853_111502561	3300010162	Termite Gut	PDYSYRGKHLQLRFTVEDDGVFTMPWSATLTYRRGRETWREVVCAENLQELVLAGRDTAVPHAEKPDF*
Ga0074045_109869671	3300010341	Bog Forest Soil	DEGVFTMPWSATITYRRGAEAWREVVCAENTRELAMAGRGAAVPTADQPDF*
Ga0126370_126628532	3300010358	Tropical Forest Soil	EGVFTMPWSATITYRRGREAWREVVCAENLQELVLAGRDTAVPRANKPDF*
Ga0136449_1032255331	3300010379	Peatlands Soil	GVFTMPWSATITYRRGREAWREVVCAENTRELAIAGRDAAVPRADKPDF*
Ga0126383_105559222	3300010398	Tropical Forest Soil	YYSYRGKHLHLQFTVEDEGGFTMPWSATITYRRGAEAWREVVCAENMRELAMAGRDSAVPTANKPDF*
Ga0126383_106878822	3300010398	Tropical Forest Soil	EGVFTTPWSATITYRRGREAWREVVCPENLQELRLAGREAAVPIAQKPEF*
Ga0134123_126277032	3300010403	Terrestrial Soil	AFPMPWSATITYRPGIACWREVVCPENLLELNLANRDGGIPSATTLDF*
Ga0150983_102136341	3300011120	Forest Soil	PRRAWREGVCAENTRELTVVGTAATVPRADKPDF*
Ga0137389_105262652	3300012096	Vadose Zone Soil	GADAGSAPDYSYRGKHLQLQFTVEDDGVFTMPWSATITYRRGAEAWREVVCAENTLELAIAGRDAAVPRADKSDF*
Ga0137388_111633751	3300012189	Vadose Zone Soil	YRGKHLQLQFTVEDEGVFTMPWSATITYRRGAEAWREVVCAENTLELTLAGRDAAMPRADKPDF*
Ga0137383_111367201	3300012199	Vadose Zone Soil	TMPWSATITYRRGAEEWREVVCAENRQELAIAGRGAGVPVADKPDF*
Ga0137376_108896632	3300012208	Vadose Zone Soil	RGKHLQLGFTVEDEGVFTMPWSATVTYRRGAESWREIVCAENTRELALAGRSAAVPHAEKPDF*
Ga0137390_116360181	3300012363	Vadose Zone Soil	GSAPDYSYRGKHLQLRFTVEDEGVFTMPWSATLTYRRGIEAWREVVCTENTRELGIAGRDAAVPAADKPDF*
Ga0137413_105791701	3300012924	Vadose Zone Soil	YRRGAEPWRKVVCAENTRELALAGRSAAAPHADKPDF*
Ga0137413_112805931	3300012924	Vadose Zone Soil	RGAEPWREVVCAENTRELALAGRSAAVPHADKPDF*
Ga0137419_113340412	3300012925	Vadose Zone Soil	FTVEDEGVFTMPWSATITYRRGREAWREVVCAENLQELVLAGRDTAVPRANKPDF*
Ga0137416_122099451	3300012927	Vadose Zone Soil	GSAPDYSYRGTHLQLLFTVEDEGVFTMPWSATITYRRGREAWREVVCAENLQELVLAGRDTAVPRANKPDF*
Ga0126369_102115391	3300012971	Tropical Forest Soil	EDEGVFTMPWSATITYRRGAEAWREVVCAENMRELAMAGRDAAVPTANKPDF*
Ga0126369_107413901	3300012971	Tropical Forest Soil	EDEGVFTMPWSATITYRRGAEAWREVVCAENMRELAMAGRDAAVPTAHKPDF*
Ga0126369_117079532	3300012971	Tropical Forest Soil	QLQFTVEDEGVFTMPWSATITYRRGREAWREVVCTENTQELMLAGRDAAVPHADKPDF*
Ga0126369_118679242	3300012971	Tropical Forest Soil	TITYRRGLEAWREVVCAENTRELAFAGRDTAVPRADRPDF*
Ga0126369_135655301	3300012971	Tropical Forest Soil	TVEDEGVFTMPWSATITYRRGAEAWREVVCAENMRELALAGRAAAVPIANQADF*
Ga0182024_109382802	3300014501	Permafrost	PWTATITYRRGIEAWREVVCPENTRELAIAGRAAAVPTADKPDF*
Ga0182030_105238781	3300014838	Bog	YTYRGKHLQLRFTVEDDGVFTMPWSATVTYRRGKEPWREIVCPENTQELAFAGRDSRIPTADKPDF*
Ga0137409_112626052	3300015245	Vadose Zone Soil	ENLRPGQGADAGSAPDYSYRGKHLQLEFTVEDEGVFTMPWSATVTYRRGAEPWREVVCAENTRELALAGRSTALPHADKPDF*
Ga0182036_109190191	3300016270	Soil	RRGKEDWREVVCPENKEELAIAGRGAAVPTANKPDF
Ga0182041_114247531	3300016294	Soil	DAGSAPDYNYRGKHLQLQFTVEDEGVFTMPWSATITYRRGAEAWREVVCAENMRELALAGRAAAVPMANQADF
Ga0182041_115095732	3300016294	Soil	SAPDYSYRGKHLQLQFTVEDEGVFTIPWSATITYRRGAEPWREVVCAENTRELAIAGRATSGPTANQTDF
Ga0182035_110890421	3300016341	Soil	GSAPDYSYRGKHLQLQFTVEDEGVFTMPWLATITYRRGAEAWREVVCAENMRELAMAGRDAAVPTAHKPDF
Ga0182040_117016181	3300016387	Soil	RPAVGADAGSAPDYSYRGKHLQLHFTVQDEGVFTMPWSATITYRRGREEWREVVCAENMREQAIAGRGPAVPTARKPDF
Ga0182037_117496002	3300016404	Soil	MPWSATITYRRGREAWREVVCAENTRELELAGRNGAVPRADKPDF
Ga0182039_103470212	3300016422	Soil	RIEVSGSTGFSRDPAYKGKGLQLKFTVDDEGVFTMPWSATITYRRGAEAWREVVCAENMRELALAGRAAAVPIANQADF
Ga0182039_114715182	3300016422	Soil	FTVEDAGAFTIPCSATITYRRGREEWREVVCAENMREQAIAGRGPAVPTAHKPDF
Ga0182039_122000701	3300016422	Soil	GSAPDYSYRGKHLQLQFTVEDEGVFTMPWSATITYRRGAEAWREVVCAENMRELALAGRAAAVPMANQADF
Ga0182038_120612002	3300016445	Soil	QFTVEDEGVFTMPWTATITYRRGREAWREVVCAENTRELAIAGRAGAVPRADKPDF
Ga0187818_102775002	3300017823	Freshwater Sediment	FTVEDEGVFTMPWTATETYRRGVEQWREIVCPENTRELIVAGRGAAIPTADKPDF
Ga0187785_103045722	3300017947	Tropical Peatland	APDYSYRGKHLQLQFTVEDEGVFTMPWSATITYRRGREAWREVVCAENTQELALAGRNGAVPHADKPDF
Ga0187778_104403262	3300017961	Tropical Peatland	GVFTMPWSATITYRRGREAWREVVCTENTQELALAGRDKAVPHADKPDF
Ga0187783_100349021	3300017970	Tropical Peatland	APRADYRGKHLQLRFTVEDEGVFTVPWSATITYRRGFEQWREVVCAENKRELALAGRAAAAPNADKPDF
Ga0187783_100599644	3300017970	Tropical Peatland	MPWSATITYRRGLEAWREVVCAENTLELELAGRNGAVPRADKSNF
Ga0187781_102461962	3300017972	Tropical Peatland	YGYRGKVLQPQFAVQDEGVFTMPWSATITYRRGREEWREVVCPENTQELVIAGRGAAVPRADKPDF
Ga0187777_114253782	3300017974	Tropical Peatland	ATITYRRGREAWREVVCPENLQELTLAGRDSAVPIAHTPDF
Ga0187766_112311411	3300018058	Tropical Peatland	SYRGKHLQLHFTVEDEGAFTMPWSATITYRRAREAWREVVCPENMQELALAGRDAAVPTAHKPDF
Ga0187784_100861872	3300018062	Tropical Peatland	MPWSATITYRRGREEWREVVCPENTQELVIAGRGAAVPRADKPDF
Ga0187784_104998562	3300018062	Tropical Peatland	PARGADAGSAPDPNYRGKHLQLEFTVEDSGVFTMPWKATITYRRGFEAWREIVCAENTRELAIAGRGGAVPTADKPDF
Ga0187784_114671002	3300018062	Tropical Peatland	SAPDYSYRGKHLQLHFTVEDQGVFTMPWSATITYRRGLEAWREVACPENTHELVIAGRGNAVPHADKPDF
Ga0179596_100320884	3300021086	Vadose Zone Soil	KHLQLHFTVEDEGVFTMPWSATITYRRGLEAWREVVCAENLQELVLAGRDTAVPRANKPD
Ga0210400_102430922	3300021170	Soil	MPWSATVANRRGIEEWRDVVCAENTRELTVGGTAATVPRADKPDF
Ga0210408_103921742	3300021178	Soil	RGADAGSAPDYSYRGKHLQLRFTVEDGGTFTMPWSATITYRRGKEEWREVVCPENKQELAIAGRGAAVPTANRPDF
Ga0210408_107755502	3300021178	Soil	MPWSATVTYRRGIEEWREVVCAENTRELTVGGTAATVPRADKPDF
Ga0213876_107886622	3300021384	Plant Roots	SAPRADYRGKHLQLEFRVEDDGVFTMPWTATITYRRGFEAWREIVCPENTRELAIAGRASAVPTANKPDF
Ga0210387_115326832	3300021405	Soil	KADYRGKHLQLEFTVEDDGVFTMPWTATITYRRGFEAWREIVCAENTRELAIAGRGNAVPTADKPDF
Ga0242664_10483472	3300022527	Soil	GTHLQLQFTVEDDGVFTTPWSATITYRRGRETWREVVCAENTQELALAGRNGAVPHADRPDF
Ga0257148_10137691	3300026345	Soil	TYRRGLEAWREVVCAENLQELVLAGRDTAVPRANKPDF
Ga0257152_10228451	3300026369	Soil	RENRRPPGGADAGSAPDYSYRGKHLQLHFTVEDEGVFTMPWSATITYRRGLEAWREVVCAENLQELVLAGRDTAVPRANKPDF
Ga0257159_10219261	3300026494	Soil	VEDEGVFTMPWSATITYRRGLEAWREVVCAENLQELVLAGRDTAVPRANKPDF
Ga0257165_10859811	3300026507	Soil	SATITYRRGLEAWREVVCAENLQELVLAGRDTAVPRANKPDF
Ga0257168_10254701	3300026514	Soil	DYSYRGKHLQLHFTVEDEGVFTMPWSATITYRRGLEAWREVVCAENLQELVLAGRDTAVPRANKPDF
Ga0209009_10369072	3300027667	Forest Soil	LLLQFTVEDEGVFTMPWSATITYRRGLAGWFEYICAENPRGFFAGKDSAVPHADKPDF
Ga0209772_101550552	3300027768	Bog Forest Soil	AGAAPDYAYRGKLLQLQFTVEDEGVFTMPWTATITYRRAAEAWREVVCAENTNEYYGGDTSNVPYADKSDF
Ga0209811_103349662	3300027821	Surface Soil	LRPALGADAGSAPDYSYRGKHLQLQFTVDDEGVFTMPWSATVTYRPGREDWREVVCSENRLEPTLAGRGTAVPTATTPDF
Ga0209517_102059783	3300027854	Peatlands Soil	GVFTMPWSATITYRRGVEAWREVVCAENTRELTMAGRGAAVPTAEKPDF
Ga0311348_112936552	3300030019	Fen	LQLRFTVEDDGVFTMPWSATITYRRGKEAWREVVCPENTQELAFAGRDAHIPTAAKPDF
Ga0318541_104147841	3300031545	Soil	YRGKHLQLQFTVEDEGVFTMPWLATITYRRGAEAWREVVCAENMRELAMAGRDAAVPTAHKPDF
Ga0318541_104420632	3300031545	Soil	DAGSAPDYSYRGKLLQLQFTVEDEGVFTMPWTATITYRRGREAWREVVCAENTRELAIAGRAGAVPRADKPDF
Ga0318541_104856961	3300031545	Soil	MQARHLTTGYRGKHLQLQFTVEDEGVFTMPWSATITYRRGAEAWREVVCAENMRELAMAGRDAAVPTANKPDF
Ga0310915_104020552	3300031573	Soil	YSYRGKLLQLQFTVEDEGVFTMPWTATITYRRGREAWREVVCAENTRELAIAGRAGAVPRADKPDF
Ga0306917_112167071	3300031719	Soil	RENMRPARGADAGSAPDYSYRGKHLQLQFTVQDEGVFTMPWSATITYRRGKEEWREVVCPENKQELAIAGRGAAVPTANRPDF
Ga0306917_114064422	3300031719	Soil	MQARHLTTGYRGKHLQLQFTVEDEGVFTMPWLATITYRRGAEAWREVVCAENMRELAMAGRDAAVPTANKPDF
Ga0306918_104220473	3300031744	Soil	ADAGPAPDYAYRGRLLQLKFTVEDEGVFTMPWSATITYRRAGAEPWREVVCAENTQELAFAGRQAARPIADKPDF
Ga0318537_103072692	3300031763	Soil	TYRRGAEAWREVVCAENMRELALAGRAAAVPIANQADF
Ga0318521_105204331	3300031770	Soil	RGKGLQLEFTVEDAGVFTMPWSATITYRRGREAWREVVCPENLQELRLAGREAAVPIAQKPDF
Ga0318547_107398482	3300031781	Soil	DYSYRGKHLQLQFTVQDEGVFTMPWSATITYRRGKEEWREVVCPENKQELAIAGRGAAVPTANRPDF
Ga0310917_106990921	3300031833	Soil	TVEDEGVFTMPWSATITYRRGAEAWREVVCAENMRELALAGRAAAVPIANQADF
Ga0318536_101282692	3300031893	Soil	DAGSAPDYSYRGKHLQLHFTVEDEGVFTMPWSATITYRRGREAWREVVCPENLQELRLAGREAAVPIAQKPDF
Ga0306923_125732621	3300031910	Soil	SGADAGSAPDYSYRGKHLQLRFTVEDEGVFTIPWSATITYRRGAEPWREVVCAENTRELAIAGRATAVPTAKRTDF
Ga0310912_108287702	3300031941	Soil	LQLHFTVEDGGVFTMPWSATITYRRGREAWREVVCPENLQELRLAGREAAVPIAQKPDF
Ga0310916_106595442	3300031942	Soil	AGAFTIPCSATITYRRGREEWREVVCAENMREQAIAGRGPAVPTAYKPDF
Ga0310916_107384522	3300031942	Soil	APDYNYRGKHLQLQFTVEDEGVFTMPWSATITYRRGAEPWREVVCAENTRELAIAGRATAVPTAKRTDF
Ga0310913_108271083	3300031945	Soil	FTVEDEGVFTMPWSATITYRRGAEAWREVVCAENMRELALAGRAAAVPMANQADF
Ga0310913_111669742	3300031945	Soil	DYSYRGKHLQLRFTVEDEGVFTMPWSATITYRRGKEDWREVVCPENKQELAIAGRGAAVPTANRPDF
Ga0306926_120566611	3300031954	Soil	GVFTMPWSATITYRRGAEAWREVVCAENMRELALAGRAAAVPIANQADF
Ga0310911_107643772	3300032035	Soil	DAGSAPDYSYRGKHLQLQFTVEDEGVFTMPWSATITYRRGAEAWREVVCAENMRELALAGRAAAVPIANQADF
Ga0318533_111188032	3300032059	Soil	RFTVEDAGAFTIPCSATITYRRGREEWREVVCAENMREQAIAGRGPAVPTAYKPDF
Ga0306924_117252701	3300032076	Soil	LATITYRRGAEAWREVVCAENMRELAMAGRDAAVPTAHKPDF
Ga0306924_123945481	3300032076	Soil	NLRPAGGADAGSAPDYSYRGKHLQLHFTVEDEGVFTMPWSATITYRRGREAWREVVCPENLQELRLAGREAAVPIAQKPDF
Ga0318518_105897542	3300032090	Soil	APDYSYRGKLLQLQFTVEDEGVFTMPWTATITYRRGREAWREVVCAENTRELAIAGRAGAVPRADKPDF
Ga0311301_107872783	3300032160	Peatlands Soil	ARRWGKHLQLRFTVEDEGVFTMPWTATITYRRGIEAWREVVCPENTRELAIAGRAAAVPTADKPDF
Ga0311301_126815862	3300032160	Peatlands Soil	APDYGYRGKLLQLQFTVEDEGVFTMPWSATITYRRGREAWREVVCAENTRELAIAGRDAAVPRADKPDF
Ga0306920_1038857521	3300032261	Soil	SAPDYSYRGKHLQLQFTVEDEGVFTIPWSATITYRRGAEPWREVVCAENTRELAIAGRATSVPTANQTDF
Ga0306920_1043533962	3300032261	Soil	ATITYRRGRETWREVVCPENLQELALAGRDSAVPIAHTPDF
Ga0348332_127743491	3300032515	Plant Litter	TYRRGSEAWREIACAENRQELAIAGRGAAVPHTDKPDF
Ga0335081_103432261	3300032892	Soil	TATITYRRGREAWREVVCAENTRELAIAGRAAAVPRADKPDF
Ga0310914_111004732	3300033289	Soil	WSATITYRRGREAWREVVCPENLQELRLAGREAAVPIAQKPDF
Ga0310914_112419661	3300033289	Soil	FTMPWLATITYRRGAEAWREVVCAENMRELAMAGRDAAVPTANKPDF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064039

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences