Metagenome / Metatranscriptome Family F064219

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F064219
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	75 residues
Representative Sequence	AATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGQVGAEATALLVALPEDLAARARELYGPMA
Number of Associated Samples	99
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	9.30 %
% of genes near scaffold ends (potentially truncated)	88.37 %
% of genes from short scaffolds (< 2000 bps)	82.17 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (70.543 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (27.132 % of family members)
Environment Ontology (ENVO)	Unclassified (31.783 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (34.109 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.22% β-sheet: 51.35% Coil/Unstructured: 32.43%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF13548	DUF4126	18.60
PF11695	DUF3291	6.98
PF01471	PG_binding_1	3.88
PF06224	HTH_42	3.10
PF13408	Zn_ribbon_recom	2.33
PF08281	Sigma70_r4_2	2.33
PF13602	ADH_zinc_N_2	2.33
PF00027	cNMP_binding	2.33
PF00202	Aminotran_3	2.33
PF00563	EAL	1.55
PF13404	HTH_AsnC-type	1.55
PF07508	Recombinase	1.55
PF01544	CorA	1.55
PF00857	Isochorismatase	1.55
PF03551	PadR	0.78
PF12802	MarR_2	0.78
PF12680	SnoaL_2	0.78
PF05977	MFS_3	0.78
PF13483	Lactamase_B_3	0.78
PF04542	Sigma70_r2	0.78
PF01636	APH	0.78
PF01740	STAS	0.78
PF00211	Guanylate_cyc	0.78
PF14696	Glyoxalase_5	0.78
PF00239	Resolvase	0.78
PF00296	Bac_luciferase	0.78
PF00990	GGDEF	0.78
PF00082	Peptidase_S8	0.78
PF13424	TPR_12	0.78
PF16859	TetR_C_11	0.78
PF11898	DUF3418	0.78
PF10604	Polyketide_cyc2	0.78
PF01370	Epimerase	0.78
PF03061	4HBT	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	3.10
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	2.33
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	1.55
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	1.55
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.55
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	1.55
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	1.55
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	1.55
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	1.55
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.78
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.78
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.78
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.78
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.78
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.78
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.78
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.78
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.78
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.78
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.54 %
Unclassified	root	N/A	29.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.54 %
Unclassified	root	N/A	29.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.54 %
Unclassified	root	N/A	29.46 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	65.12 %
Unclassified	root	N/A	29.46 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	50.39 %
Unclassified	root	N/A	29.46 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	33.33 %
Unclassified	root	N/A	29.46 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.46 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	4.65 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.33 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.55 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.55 %
Kineosporiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales	0.78 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.78 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.46 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	4.65 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.55 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.55 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.78 %
Kineosporiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	0.78 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.46 %
Modestobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter	4.65 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.55 %
Asanoa	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Asanoa	0.78 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.78 %
Kineosporia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	0.78 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.78 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.46 %
Modestobacter versicolor	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter versicolor	4.65 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.55 %
Asanoa iriomotensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Asanoa → Asanoa iriomotensis	0.78 %
Kineosporia babensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia → Kineosporia babensis	0.78 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.78 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.78 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001431\|F14TB_100415154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1400	Open in IMG/M
3300003373\|JGI25407J50210_10137888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	601	Open in IMG/M
3300003373\|JGI25407J50210_10140552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	594	Open in IMG/M
3300004016\|Ga0058689_10027228	Not Available	965	Open in IMG/M
3300004114\|Ga0062593_102543375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	580	Open in IMG/M
3300005338\|Ga0068868_101386357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	655	Open in IMG/M
3300005981\|Ga0081538_10073870	All Organisms → cellular organisms → Bacteria	1860	Open in IMG/M
3300005985\|Ga0081539_10019456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4646	Open in IMG/M
3300005985\|Ga0081539_10078811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1738	Open in IMG/M
3300006058\|Ga0075432_10032848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1797	Open in IMG/M
3300006844\|Ga0075428_102406207	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300006847\|Ga0075431_100719760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	975	Open in IMG/M
3300006852\|Ga0075433_10307059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1404	Open in IMG/M
3300006871\|Ga0075434_101662784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	646	Open in IMG/M
3300006904\|Ga0075424_100666964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1110	Open in IMG/M
3300009094\|Ga0111539_11969841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	677	Open in IMG/M
3300009094\|Ga0111539_12985815	All Organisms → cellular organisms → Bacteria → Terrabacteria group	547	Open in IMG/M
3300009100\|Ga0075418_10734559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1065	Open in IMG/M
3300009147\|Ga0114129_10165789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3015	Open in IMG/M
3300009147\|Ga0114129_11215038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	938	Open in IMG/M
3300009156\|Ga0111538_10069091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	4498	Open in IMG/M
3300009789\|Ga0126307_10356554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter versicolor	1178	Open in IMG/M
3300009810\|Ga0105088_1002282	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2440	Open in IMG/M
3300009810\|Ga0105088_1065242	Not Available	633	Open in IMG/M
3300009811\|Ga0105084_1011723	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300009815\|Ga0105070_1082860	Not Available	620	Open in IMG/M
3300009820\|Ga0105085_1003633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2515	Open in IMG/M
3300009840\|Ga0126313_10099800	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2132	Open in IMG/M
3300009840\|Ga0126313_10217990	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1470	Open in IMG/M
3300009840\|Ga0126313_10244191	Not Available	1391	Open in IMG/M
3300009840\|Ga0126313_10314945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Asanoa → Asanoa iriomotensis	1226	Open in IMG/M
3300010038\|Ga0126315_10605171	Not Available	708	Open in IMG/M
3300010040\|Ga0126308_10903867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	615	Open in IMG/M
3300010041\|Ga0126312_10013026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	5571	Open in IMG/M
3300010041\|Ga0126312_10175535	Not Available	1493	Open in IMG/M
3300010041\|Ga0126312_10670706	Not Available	747	Open in IMG/M
3300010045\|Ga0126311_11340455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	596	Open in IMG/M
3300010166\|Ga0126306_10031253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3600	Open in IMG/M
3300010166\|Ga0126306_10036853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3336	Open in IMG/M
3300010395\|Ga0058701_10762314	Not Available	529	Open in IMG/M
3300012204\|Ga0137374_10185505	Not Available	1810	Open in IMG/M
3300012206\|Ga0137380_10056337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3601	Open in IMG/M
3300012351\|Ga0137386_10134916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1761	Open in IMG/M
3300012354\|Ga0137366_10084481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2413	Open in IMG/M
3300012355\|Ga0137369_10140067	Not Available	1933	Open in IMG/M
3300012359\|Ga0137385_10045438	All Organisms → cellular organisms → Bacteria	3932	Open in IMG/M
3300012359\|Ga0137385_10936574	All Organisms → cellular organisms → Bacteria → Terrabacteria group	716	Open in IMG/M
3300012360\|Ga0137375_10071633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3658	Open in IMG/M
3300012532\|Ga0137373_10779340	Not Available	708	Open in IMG/M
3300013306\|Ga0163162_10033869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5079	Open in IMG/M
3300013307\|Ga0157372_11313420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	835	Open in IMG/M
3300014487\|Ga0182000_10352669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	634	Open in IMG/M
3300018027\|Ga0184605_10241006	All Organisms → cellular organisms → Bacteria → Terrabacteria group	822	Open in IMG/M
3300018052\|Ga0184638_1031607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1910	Open in IMG/M
3300018056\|Ga0184623_10113697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1252	Open in IMG/M
3300018075\|Ga0184632_10020560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2796	Open in IMG/M
3300018077\|Ga0184633_10489159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	599	Open in IMG/M
3300018078\|Ga0184612_10233535	Not Available	952	Open in IMG/M
3300018081\|Ga0184625_10003979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6525	Open in IMG/M
3300018429\|Ga0190272_12090064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	603	Open in IMG/M
3300018465\|Ga0190269_11509299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	554	Open in IMG/M
3300018465\|Ga0190269_12009478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter versicolor	504	Open in IMG/M
3300018466\|Ga0190268_11043175	Not Available	657	Open in IMG/M
3300019767\|Ga0190267_11133933	Not Available	565	Open in IMG/M
3300022534\|Ga0224452_1041027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1359	Open in IMG/M
3300022756\|Ga0222622_10923096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter versicolor	640	Open in IMG/M
3300027006\|Ga0209896_1021753	Not Available	723	Open in IMG/M
3300027056\|Ga0209879_1010116	Not Available	1521	Open in IMG/M
3300027056\|Ga0209879_1052032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia → Kineosporia babensis	664	Open in IMG/M
3300027379\|Ga0209842_1045050	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300027490\|Ga0209899_1010489	All Organisms → cellular organisms → Bacteria	2118	Open in IMG/M
3300027577\|Ga0209874_1102406	All Organisms → cellular organisms → Bacteria → Terrabacteria group	681	Open in IMG/M
3300027718\|Ga0209795_10071552	Not Available	1016	Open in IMG/M
3300027750\|Ga0209461_10046610	All Organisms → cellular organisms → Bacteria → Terrabacteria group	871	Open in IMG/M
3300027952\|Ga0209889_1017764	Not Available	1650	Open in IMG/M
3300027957\|Ga0209857_1035767	Not Available	904	Open in IMG/M
3300027961\|Ga0209853_1104869	Not Available	714	Open in IMG/M
3300028711\|Ga0307293_10002035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5080	Open in IMG/M
3300028715\|Ga0307313_10034866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1435	Open in IMG/M
3300028717\|Ga0307298_10186268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300028720\|Ga0307317_10072455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1124	Open in IMG/M
3300028721\|Ga0307315_10074421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter versicolor	974	Open in IMG/M
3300028722\|Ga0307319_10009100	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3025	Open in IMG/M
3300028722\|Ga0307319_10040573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1452	Open in IMG/M
3300028722\|Ga0307319_10279112	Not Available	551	Open in IMG/M
3300028722\|Ga0307319_10314159	Not Available	519	Open in IMG/M
3300028744\|Ga0307318_10008882	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3238	Open in IMG/M
3300028744\|Ga0307318_10105807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	953	Open in IMG/M
3300028744\|Ga0307318_10189316	All Organisms → cellular organisms → Bacteria → Terrabacteria group	711	Open in IMG/M
3300028755\|Ga0307316_10266100	Not Available	624	Open in IMG/M
3300028755\|Ga0307316_10376595	All Organisms → cellular organisms → Bacteria → Terrabacteria group	524	Open in IMG/M
3300028771\|Ga0307320_10337966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter versicolor	600	Open in IMG/M
3300028778\|Ga0307288_10422820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300028787\|Ga0307323_10030871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1860	Open in IMG/M
3300028787\|Ga0307323_10206002	All Organisms → cellular organisms → Bacteria → Terrabacteria group	710	Open in IMG/M
3300028791\|Ga0307290_10281640	Not Available	609	Open in IMG/M
3300028791\|Ga0307290_10343963	All Organisms → cellular organisms → Bacteria → Terrabacteria group	546	Open in IMG/M
3300028796\|Ga0307287_10155452	Not Available	869	Open in IMG/M
3300028796\|Ga0307287_10418343	Not Available	504	Open in IMG/M
3300028796\|Ga0307287_10420720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter versicolor	502	Open in IMG/M
3300028807\|Ga0307305_10517555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300028809\|Ga0247824_10566429	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300028872\|Ga0307314_10295431	All Organisms → cellular organisms → Bacteria → Terrabacteria group	515	Open in IMG/M
3300028878\|Ga0307278_10220622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	843	Open in IMG/M
3300028880\|Ga0307300_10269523	All Organisms → cellular organisms → Bacteria → Terrabacteria group	569	Open in IMG/M
3300028884\|Ga0307308_10022067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2929	Open in IMG/M
3300030496\|Ga0268240_10109374	Not Available	654	Open in IMG/M
3300030499\|Ga0268259_10036805	Not Available	961	Open in IMG/M
3300030510\|Ga0268243_1158650	Not Available	550	Open in IMG/M
3300030903\|Ga0308206_1002102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2153	Open in IMG/M
3300031092\|Ga0308204_10113067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	764	Open in IMG/M
3300031731\|Ga0307405_10449811	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1021	Open in IMG/M
3300031731\|Ga0307405_10527871	Not Available	951	Open in IMG/M
3300031731\|Ga0307405_10653031	Not Available	865	Open in IMG/M
3300031731\|Ga0307405_11747157	Not Available	552	Open in IMG/M
3300031824\|Ga0307413_10100585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1909	Open in IMG/M
3300031824\|Ga0307413_12105548	Not Available	510	Open in IMG/M
3300031852\|Ga0307410_10276355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1316	Open in IMG/M
3300031852\|Ga0307410_10850391	Not Available	779	Open in IMG/M
3300031901\|Ga0307406_11330007	Not Available	628	Open in IMG/M
3300031911\|Ga0307412_10243877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1391	Open in IMG/M
3300031995\|Ga0307409_102191402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	582	Open in IMG/M
3300032002\|Ga0307416_102340853	Not Available	634	Open in IMG/M
3300032004\|Ga0307414_11195413	Not Available	704	Open in IMG/M
3300032005\|Ga0307411_10130630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1835	Open in IMG/M
3300032126\|Ga0307415_100026737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3645	Open in IMG/M
3300032126\|Ga0307415_101747394	Not Available	601	Open in IMG/M
3300034115\|Ga0364945_0167260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	664	Open in IMG/M
3300034174\|Ga0334932_021465	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1082	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.22%
Host-Associated	Host-Associated	31.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.24%
Plants	Host-Associated → Plants	31.78%
Aquatic	Environmental → Aquatic	6.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.48%
Sediment	Environmental → Aquatic → Sediment	6.98%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.10%
Roots	Host-Associated → Plants → Roots	2.33%
Phyllosphere	Host-Associated → Plants → Phyllosphere	2.33%
Phylloplane	Host-Associated → Plants → Phylloplane	1.55%
Floodplain	Environmental → Terrestrial → Floodplain	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.48%
Sand	Environmental → Terrestrial → Soil → Sand	10.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.10%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.33%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	2.33%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.55%
Loam	Environmental → Terrestrial → Soil → Loam	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.48%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	10.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.10%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	27.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	12.40%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	10.85%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	10.08%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.30%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.33%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	2.33%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	2.33%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.55%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.55%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010395	Agave microbial communities from Guanajuato, Mexico - Or.Ma.e	Host-Associated	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027957	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030499	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034174	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 28HNS	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TB_1004151541	3300001431	Soil	RYRAQVPYDAPLPLVAGLTDTRGRRVRAWSRLHLPSGQVGAEATALLVALPEDLAARARELYGPMA*
JGI25407J50210_101378882	3300003373	Tabebuia Heterophylla Rhizosphere	ATATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLSSGEVGAEATALLVALPEDLATRARELYGPMA*
JGI25407J50210_101405521	3300003373	Tabebuia Heterophylla Rhizosphere	AGIWAATATMDVRYRAQVPYDAPLPLVAGLTDXRGRRVRTWSRLHLPSGQVGADATGLLVALPEEVAARARELYGPMA*
Ga0058689_100272282	3300004016	Agave	WAATATMDVRYRAQVPYDAPLPLVAGVTDSRGRRVRAWSRLHLPSGAVGAEATALLVALPEDLATRARELYGPMA*
Ga0062593_1025433752	3300004114	Soil	VPYDAPLPLVAGLTDTRGRRVRAWSRLQLPSGEVGAEATALLVALPENLATRARELYGPMA*
Ga0068868_1013863572	3300005338	Miscanthus Rhizosphere	DEVMGYASILLAGIWAATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPDDLADRARALYGPMA*
Ga0081538_100738701	3300005981	Tabebuia Heterophylla Rhizosphere	ILLAGIWAATATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGQVGADATGLLVALPEEVAARARELYGPMA*
Ga0081539_100194565	3300005985	Tabebuia Heterophylla Rhizosphere	MGYASILLAGIWAATATLDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPEDLAARARELYGPMA*
Ga0081539_100788114	3300005985	Tabebuia Heterophylla Rhizosphere	PYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEIGAEATALLVALPEDLAARARELYGPMA
Ga0075432_100328481	3300006058	Populus Rhizosphere	APLPLVAGLTDTRGRRVRAWSRLQLPSGQVGAEATALLVALPEDLAARARELYGPMA*
Ga0075428_1024062071	3300006844	Populus Rhizosphere	QVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGQVGAEATALLVALPEELASRARTLYGPMA*
Ga0075431_1007197601	3300006847	Populus Rhizosphere	VPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGQVGAEATALLVALPEELASRARTLYGPMA*
Ga0075433_103070591	3300006852	Populus Rhizosphere	LAGIWAATATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRAWSRLQLPSGQVGAEATALLVALPEDLAARARELYGPMA*
Ga0075434_1016627842	3300006871	Populus Rhizosphere	LAGIWAATATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGQVGAEATALLVALPGDLAARARELYGPMA*
Ga0075424_1006669642	3300006904	Populus Rhizosphere	GIWAATATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRAWSRLQLPSGQVGAEATALLVALPEDLAARARELYGPMA*
Ga0111539_119698412	3300009094	Populus Rhizosphere	ATMDVRYRAQVPYDAPLPLVAGVTDARGRRVRTWSRLLLPSGRVGAEATALLVALPEDLASRARELYGPMA*
Ga0111539_129858152	3300009094	Populus Rhizosphere	VPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGQVGAEATALLVALPGDLAARARELYGPMA*
Ga0075418_107345591	3300009100	Populus Rhizosphere	TATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGQVGAEATALLVALPEELASRARTLYGPLA*
Ga0114129_101657891	3300009147	Populus Rhizosphere	AGIWAATATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGQVGAEATALLVALPGDLAARARELYGPMA*
Ga0114129_112150382	3300009147	Populus Rhizosphere	MDVRYRAQVLYDAPLPLVAGVTDARGRRVRTWSRLLLPSGRVGAEATALLVALPEDLASRARELYGPMA*
Ga0111538_100690916	3300009156	Populus Rhizosphere	ALDEVMGYASILLAGIWAATATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRAWSRLQLPSGQVGAEATALLVALPEDLAARARELYGPMA*
Ga0126307_103565543	3300009789	Serpentine Soil	MGYASILLAGIWAATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPDDLADRARALYGPMA*
Ga0105088_10022824	3300009810	Groundwater Sand	MEVRFRAHVPYDAPLPMVAGVTDARGRRVRAWARLHLPDGRVGAEATGLLVALPAEVADRARALYGPMA*
Ga0105088_10652421	3300009810	Groundwater Sand	VLLTAPALRVGVYHPLDEVIGYASILLAGIWAATATMDLRYPAQVPYDAPLPLVAGLVDTRGRWVRAWARLHLPGGGVGVEAKGLLVALPEEVAARARELYGPMA*
Ga0105084_10117231	3300009811	Groundwater Sand	MGYASILLAGIWAATATMDLRYPAQVPYDAPLPLVAGLVDTRGRWVRAWARLHLPGGGVGVEAKGLLVALPEEVAARARELYGPMA*
Ga0105070_10828601	3300009815	Groundwater Sand	SATALDEVMGYSAILLAGIWAATATMDLRYRAQVPYDAPLPLVAGLIDTHGRRVRAWARLHLPGGGVGVEAKGLLVALPEEVAARARELYGPMA*
Ga0105085_10036333	3300009820	Groundwater Sand	ARVPYDAPLPLVAGVTDARGRRVRAWARLHLPDGRVGAEASGLLVALPADVAERARALYGPMA*
Ga0126313_100998001	3300009840	Serpentine Soil	ATALDEVMGYASILLAGIWAATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEIGAEATALLVALPEDLAARARELYGPMA*
Ga0126313_102179903	3300009840	Serpentine Soil	RYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGQVGAEATALLVALPEDLAARARELYGPMA*
Ga0126313_102441913	3300009840	Serpentine Soil	LDEVMGYASILLAGIWAATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPEDLAARARELYGPMA*
Ga0126313_103149451	3300009840	Serpentine Soil	RAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEIGAEATALLVALPEDLAARARELYGPMA*
Ga0126315_106051712	3300010038	Serpentine Soil	YASILLAGIWAATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLLLPSGEVGAEATALLVALPEELASRARELYGPMA*
Ga0126308_109038671	3300010040	Serpentine Soil	PLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPEDLAARARELYGPMA*
Ga0126312_100130261	3300010041	Serpentine Soil	MGYASILLAGIWAATATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGQVGAEATALLVALPESLAARARELYGPMA*
Ga0126312_101755353	3300010041	Serpentine Soil	RAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPEDLADRARALYGPMA*
Ga0126312_106707061	3300010041	Serpentine Soil	TMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEIGAEATALLVALPEDLAARARELYGPMA*
Ga0126311_113404551	3300010045	Serpentine Soil	DAPLPLVAGLTDTRGRRVRAWSRLQLPSGEVGAEATALLVALPENLATRARELYGPMA*
Ga0126306_100312532	3300010166	Serpentine Soil	MDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLYLPSGEVGAEATALLVALPEELAERARALYGPMA*
Ga0126306_100368533	3300010166	Serpentine Soil	MGYASILLAGVWAATATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLLLPSGQVGAEATALLVALPEDLASRARELYGPMA*
Ga0058701_107623141	3300010395	Agave	LAGIWAATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRAWSRLQLPSGEVGAEATALLVALPENLAIRARELYGPMA*
Ga0137374_101855051	3300012204	Vadose Zone Soil	MGYSAILLAGIWTATATMDLRYRAQVPYDAPLPLVAGLIDTRGRRVRAWARLHLPGGGVGVEAKGLLVALPEEVAARARELYGPMA*
Ga0137380_100563372	3300012206	Vadose Zone Soil	MELRYRAQVPYDAPLPLVAGLADVPRDRRVRSWARLLLPDGRVGAEATGLLVALPEDLADRARLLYGPMT*
Ga0137386_101349161	3300012351	Vadose Zone Soil	AQVPYDAPLPLVAGLIDARGRRVRAWARLHLPGGGVGVEAKGLLVALPEEVAARARELYGPMA*
Ga0137366_100844815	3300012354	Vadose Zone Soil	AGIWAATATMDLRYRAQVSYHAPLPLVAGLVDARGRRVRAWARLHLPGGGVGVEAKGLLVALPEETAARARELYGPMA*
Ga0137369_101400673	3300012355	Vadose Zone Soil	MGYAAILLAGIWAATATMELRYRARVPYDAPLPLVAGLSGAPRGRRVRSWARLLLPDGGVGAEATGLLVALPDDLAERA
Ga0137385_100454384	3300012359	Vadose Zone Soil	EVRFRAPVPYDATLELVAGITETRSRRVRAWARLHLPDGTVAISATGLLVPLPPETAAPARQLYGPLA*
Ga0137385_109365741	3300012359	Vadose Zone Soil	EVRFRAPVPYDATLELVAGITETRSRRVRAWARLHLPDGTAAVSATGLLVPLPPETAARARQLYGPLA*
Ga0137375_100716332	3300012360	Vadose Zone Soil	MGYAAILLAGIWAATATMELRYRARVPYDAPLPLVAGLSGAPRGRRVRSWARLLLPDGGVGAEATGLLVALPDDLAERARRLYGPMT*
Ga0137373_107793401	3300012532	Vadose Zone Soil	EVRFRAPVPYDASLELVAGITETRSRRVRAWARLHLPDGSVGVSSTGLLVPLPPETAARARQLYGPLA*
Ga0163162_100338691	3300013306	Switchgrass Rhizosphere	TALDEVMGYASILLAGIWAATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPDDLADRARALYGPMA*
Ga0157372_113134202	3300013307	Corn Rhizosphere	PLPLVAGLTDTRGRRVRTWSSLHLPSGEVGAEATALLVALPDDLADRARALYGPMA*
Ga0182000_103526692	3300014487	Soil	RARVPYDAPLPLVAGLVDARGRRVRAWARLHLPGGQVGAEATGLLVALPEEVAARARELYGPMA*
Ga0184605_102410061	3300018027	Groundwater Sediment	TMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGQVGAEATALLVALPENLAARARELYGPMA
Ga0184638_10316071	3300018052	Groundwater Sediment	PLVAGVTDARGRRVRAWARLHLPDGRVGAEASGLLVALPAEVAERARALYGPMA
Ga0184623_101136971	3300018056	Groundwater Sediment	GGLSATALDEVMGYASILLAGIWAATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPDDLADRARALYGPLA
Ga0184632_100205603	3300018075	Groundwater Sediment	FRARVPYDAPLPLVAGVTDARGRRVRAWARLHLPDGRVGAEASGLLVALPAEVAERARALYGPMA
Ga0184633_104891592	3300018077	Groundwater Sediment	AGIWAATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPDDLADRARALYGPMA
Ga0184612_102335352	3300018078	Groundwater Sediment	ATMELRYRARVPYDAPLPLVAGLASAPRGRRVRSWARLLLPDGRVGAEATGVLVALPDGLAERARLLYGPMA
Ga0184625_100039792	3300018081	Groundwater Sediment	MGYASILLAGIWAATATMDVRYRAQVPYDAPLPLVAGLSDTRGRRVRTWSRLHLPSGQVGAEATALLVALPEELASRARTLYGPMA
Ga0190272_120900641	3300018429	Soil	MPEATATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRAWARLHLPSGRVGVEATGLLVALPPDLADRARTLYGPMA
Ga0190269_115092991	3300018465	Soil	MGYASILLAGIWAATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLLLPSGEVGAEATALLVALPEDLASRARALYGPMA
Ga0190269_120094782	3300018465	Soil	AQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPEDLADRARALYGPMA
Ga0190268_110431752	3300018466	Soil	GYASILLAGIWAATATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRAWARLHLPSGRVGVEATGLLVALPPDLADRARTLYGPMA
Ga0190267_111339331	3300019767	Soil	DEVMGYASILLAGIWAATATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGQVGAEATALLVALPEELASRARTLYGPMA
Ga0224452_10410271	3300022534	Groundwater Sediment	AGIWAATATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGQVGAEATALLVALPEELASRARTLYGPMA
Ga0222622_109230962	3300022756	Groundwater Sediment	RAQVPYDAPLPLVAGLTDSRGRRVRTWSRLHLPSGEVGAEATALLVALPDDLADRARALYGPMA
Ga0209896_10217532	3300027006	Groundwater Sand	EVMGYSAILLAGIWAATATMDLRYRAQVPYDAPLPLVAGLIDTHGRRVRAWARLHLPSGGVGVEAKGLLVALPEEVAVRARELYGPMA
Ga0209879_10101163	3300027056	Groundwater Sand	ATALDEVMGYASILLAGIWAATATMDLRYPAQVPYDAPLPLVAGLVDTRGRWVRAWARLHLPGGGVGVEAKGLLVALPEEVAARARELYGPMA
Ga0209879_10520322	3300027056	Groundwater Sand	MEVRFRAHVPYDAPLPMVAGVTDARGRRVRAWARLHLPDGRVGAEATGLLVALPAEVADRARALYGPMA
Ga0209842_10450502	3300027379	Groundwater Sand	MGYASILLAGIWAATATMDLRYPAQVPYDAPLPLVAGLVDTRGRWVRAWARLHLPGGGVGVEAKGLLVALPEEVAARARELYGPMA
Ga0209899_10104894	3300027490	Groundwater Sand	TMEVRFRAHVPYDAPLPMVAGVTDARGRRVRAWARLHLPDGRVGAEATGLLVALPAEVADRARALYGPMA
Ga0209874_11024061	3300027577	Groundwater Sand	VPYDAPLPLVAGVTDARGRRVRAWARLHLPDGQVGAEATGLLVALPAEVAERARALYGPM
Ga0209795_100715522	3300027718	Agave	ARVPYDAPLPLVAGLTDARGRRVRAWARLHLPGGQVGAEATGLLVALPADVAERARALYGPMA
Ga0209461_100466102	3300027750	Agave	TALDEVMGYASILLAGIWAATATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPENLAARARELYGPMA
Ga0209889_10177641	3300027952	Groundwater Sand	EVMGYASILLAGIWAATATMDLRYPAQVPYDAPLPLVAGLVDTRGRWVRAWARLHLPGGGVGVEAKGLLVALPEEVAARARELYGPMA
Ga0209857_10357671	3300027957	Groundwater Sand	ILLAGIWAATATMDLRYRAQVPYDAPLPLVAGLIDTRGRRVRAWARLHLPGGGVGVEAKGLLVALPEEVAVRARELYGPMA
Ga0209853_11048691	3300027961	Groundwater Sand	RFRARVPYDAPLPLVAGVTDARGRRVRAWARLHLPDGRVGAEASGLLVALPADVAERARALYGPMA
Ga0307293_100020351	3300028711	Soil	TALDEVMGYASILLAGIWAATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGQVGAEATALLVALPEDLAARARELYGPMA
Ga0307313_100348663	3300028715	Soil	WAATATMYLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPDDLADRARALYGPMA
Ga0307298_101862682	3300028717	Soil	MGYASILLAGIWAATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGQVGAEATALLVALPEDLAARARELYGPMA
Ga0307317_100724551	3300028720	Soil	PLPLVAGLTDSRGRRVRTWSRLHLPSGEVGAEATALLVALPGDLADRARALYGPMA
Ga0307315_100744213	3300028721	Soil	QVPYDAPLPLVAGLTDSRGRRVRTWSRLHLPSGEVGAEATALLVALPDDLADRARALYGPMA
Ga0307319_100091005	3300028722	Soil	VMGYASILLAGIWAATATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRAWSRLHLPSGQVGAEATALLVALPEDLAARARELYGPMA
Ga0307319_100405731	3300028722	Soil	AGIWAATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPTGEVGAEATALLVALPEDLADRARALYGPMA
Ga0307319_102791121	3300028722	Soil	GIWAATATMDLRYRAQVPYDAPLPLVAGLTDSRGRRVRTWSRLHLPSGEVGAEATALLVALPDDLADRARALYGPMA
Ga0307319_103141592	3300028722	Soil	AGIWAATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPEDLASRARALYGPMA
Ga0307318_100088821	3300028744	Soil	TALDEVMGYASILLAGIWAATATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRAWSRLHLPSGQVGAEATALLVALPEDLAARARELYGPMA
Ga0307318_101058074	3300028744	Soil	LSATALDEVMGYASILLAGIWAATATMDLRYRAQVPYHAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPDDLADRARALYGPMA
Ga0307318_101893162	3300028744	Soil	AATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGQVGAEATALLVALPEDLAARARELYGPMA
Ga0307316_102661001	3300028755	Soil	DAPLPLVAGLTDSRGRRVRTWSRLHLPSGEVGAEATALLVALPDDLADRARALYGPMA
Ga0307316_103765952	3300028755	Soil	ASILLAGIWAATATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRAWSRLHLPSGQVGAEATALLVALPEDLAARARELYGPMA
Ga0307320_103379663	3300028771	Soil	SILLAGIWAATATMDLRYRAQVPYHAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATAMLVALPDDLADRARALYGPMA
Ga0307288_104228201	3300028778	Soil	YRAQVPYDAPLPLVAGLTDSRGRRVRTWSRLHLPSGEVGAEATALLVALPDDLADRARALYGPMA
Ga0307323_100308711	3300028787	Soil	YASILLAGIWAATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPDDLADRARALYGPMA
Ga0307323_102060022	3300028787	Soil	DEVMGYASILLAGIWAATATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRAWSRLHLPSGQVGAEATALLVALPEDLAARARELYGPMA
Ga0307290_102816401	3300028791	Soil	TATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRAWARLHLPSGRVGVEATGLLVALPPDLADRARTLYGPMA
Ga0307290_103439631	3300028791	Soil	ILLAGIWAATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGQVGAEATALLVALPENLAARARELYGPMA
Ga0307287_101554522	3300028796	Soil	RVPYDAPLPLVAGVTDARGRRVRAWARLHLPGGQVGAEATGLLVALPADVAERARALYGPMA
Ga0307287_104183431	3300028796	Soil	EVRYRAQIPVDQALALVAGISAGAGGRRLRAWARLLLPDGRVGVEATGLLVALPEPMASRARELYGPLV
Ga0307287_104207202	3300028796	Soil	LLAGIWAATATMDLRYRAQVPYDAPLPLVAGLTDSRGRRVRTWSRLHLPSGEVGAEATALLVALPDDLADRARALYGPMA
Ga0307305_105175552	3300028807	Soil	RYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPDDLADRARALYGPMA
Ga0247824_105664291	3300028809	Soil	ATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGQVGAEATALLVALPEELASRARTLYGPMA
Ga0307314_102954311	3300028872	Soil	IWAATATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRAWSRLHLPSGQVGAEATALLVALPEDLAARARELYGPMA
Ga0307278_102206221	3300028878	Soil	RSQVPYDAPLPLVAGLSETRGRRLRSWSRLLLPDGKVGAEARALLVALPAEVAERARALYGPMA
Ga0307300_102695232	3300028880	Soil	TALDEVMGYASILLAGIWAATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGQVGAEATALLVALPENLAARARELYGPMA
Ga0307308_100220671	3300028884	Soil	SATALDEVMGYASILLAGIWAATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGQVGAEATALLVALPEDLAARARELYGPMA
Ga0268240_101093742	3300030496	Soil	RYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPEGLAARARELYGPMA
Ga0268259_100368051	3300030499	Agave	ATATMDVRYRAQVPYDAPLPLVAGVTDSRGRRVRAWSRLHLPSGAVGAEATALLVALPEDLATRARELYGPMA
Ga0268243_11586501	3300030510	Soil	MDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPEDLAARARELYGPMA
Ga0308206_10021022	3300030903	Soil	RYRAQVPYDASLPLVAGLIDTRGRRVRAWARLHLPGGGVGVEAKGLLVALPEEVAARARELYGPMA
Ga0308204_101130671	3300031092	Soil	SILLAGIWAATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPDDLADRARALYGPMA
Ga0307405_104498111	3300031731	Rhizosphere	TMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRAWSRLHLPSGEVGAEATALLVALPEDLAARARELYGPMA
Ga0307405_105278711	3300031731	Rhizosphere	APLPLVAGLTDTRGRRVRTWSRLHLPSGQVGAEATALLVALPEDLAARARELYGPMA
Ga0307405_106530311	3300031731	Rhizosphere	GIWAATATMDVCYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPENLAARARELYGPMA
Ga0307405_117471572	3300031731	Rhizosphere	AGIWAATATMDLRYRAQVPYDAPLPLVAGLVDTRGRRVRAWSRLHLPSGEIGAEATALLVALPEDLAARARELYGPMA
Ga0307413_101005854	3300031824	Rhizosphere	ILLAGIWAATATMDVRYRAQVPHDAPLPLVAGLTDTRGRRVRAWSRLQLPSGEVGAEATALLVALPENLATRARELYGPMA
Ga0307413_121055481	3300031824	Rhizosphere	WAATATMDVRYRAQVPYDAPLPLLAGLTDTRGRRVRTWSRLLLPSGEVGAEATALLVALPEELASRARELYGPMA
Ga0307410_102763552	3300031852	Rhizosphere	TATMEVRFRDRVPYDAPLPLVAGLTDARGRRVRAWARLHLADGRVGAEATGLLVALPAEVAERARALYGPMA
Ga0307410_108503912	3300031852	Rhizosphere	YRAQIPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGQVGAEATALLVALPENLAARARELYGPMA
Ga0307406_113300072	3300031901	Rhizosphere	IMLADIWAATATMDLRYRAQVPYDAPLPLVAGLIDTRGRRVRAWARLHLPGGGVGVEAKGLLVALPEEVAARARELYGPMA
Ga0307412_102438771	3300031911	Rhizosphere	DEVMGYASILLAGIWAATATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRAWSRLQLPSGEVGAEATALLVALPENLATRARELYGPMA
Ga0307409_1021914022	3300031995	Rhizosphere	LALVAGLIDARGRRVRAWARLHLADGRVGAEATGLLVALPAEVAERARALYGPMA
Ga0307416_1023408531	3300032002	Rhizosphere	ALDEVMGYASILLAGIWAATATMDLRYRAQVPYDAPLPLVAGLVETRGRRVRAWSRLHLPSGEIGAEATALLVALPEDLAARARELYGPMA
Ga0307414_111954131	3300032004	Rhizosphere	LAGIWAATATMDVRYRAQVPYDAPLPLLAGLTDTRGRRVRTWSRLLLPSGEVGAEATALLVALPEELASRARELYGPMA
Ga0307411_101306304	3300032005	Rhizosphere	ATATMDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPDDLADRARALYGPMA
Ga0307415_1000267376	3300032126	Rhizosphere	DAPLPLVAGLTDTRGRRVRAWSRLQLPSGEVGAEATALLVALPENLATRARELYGPMA
Ga0307415_1017473941	3300032126	Rhizosphere	ILLAGIWAATATMDVRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPEDLAARARELYGPMA
Ga0364945_0167260_441_650	3300034115	Sediment	MDLRYRAQVPYDAPLPLVAGLTDTRGRRVRTWSRLHLPSGEVGAEATALLVALPDDLADRARALYGPMA
Ga0334932_021465_870_1079	3300034174	Sub-Biocrust Soil	MDVRYRAQVPYDAPLPLVAGLTDTRGRRVRAWSRLHLPSGEVGAEATALLVALPEDLATRARELYGPMA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064219

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences