Metagenome Family F064305

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064305
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	70 residues
Representative Sequence	MKYPWLVAIAILPSVGAADSADAMTYKDIAGQWCGDVTDYVFTPDTLTVKFHDSRPANVFKITK
Number of Associated Samples	76
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	86.29 %
% of genes near scaffold ends (potentially truncated)	89.06 %
% of genes from short scaffolds (< 2000 bps)	85.16 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.750 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.812 % of family members)
Environment Ontology (ENVO)	Unclassified (59.375 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.281 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 29.35% β-sheet: 16.30% Coil/Unstructured: 54.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF11272	DUF3072	3.12
PF09361	Phasin_2	2.34
PF00072	Response_reg	1.56
PF03401	TctC	0.78
PF04392	ABC_sub_bind	0.78
PF01145	Band_7	0.78
PF01522	Polysacc_deac_1	0.78
PF00486	Trans_reg_C	0.78
PF01322	Cytochrom_C_2	0.78
PF04773	FecR	0.78
PF00982	Glyco_transf_20	0.78
PF02954	HTH_8	0.78
PF00589	Phage_integrase	0.78
PF01883	FeS_assembly_P	0.78
PF06348	DUF1059	0.78
PF01135	PCMT	0.78
PF00313	CSD	0.78
PF01176	eIF-1a	0.78
PF01548	DEDD_Tnp_IS110	0.78
PF08734	GYD	0.78
PF11953	DUF3470	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0361	Translation initiation factor IF-1	Translation, ribosomal structure and biogenesis [J]	0.78
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.78
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.78
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.78
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.78
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.78
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.78
COG3909	Cytochrome c556	Energy production and conversion [C]	0.78
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.78
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.75 %
All Organisms	root	All Organisms	31.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.75 %
cellular organisms	root	All Organisms → cellular organisms	31.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.75 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.88 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.34 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.34 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.16 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.34 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.75 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.12 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.34 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.34 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.78 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.78 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.12 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.12 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	2.34 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.34 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %
Methylocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa	0.78 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.12 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.12 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	2.34 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.34 %
unclassified Methylocapsa	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → unclassified Methylocapsa	0.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.12 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.12 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	2.34 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.34 %
Methylocapsa sp. S129	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → unclassified Methylocapsa → Methylocapsa sp. S129	0.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_100813256	Not Available	770	Open in IMG/M
3300005332\|Ga0066388_101610267	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300005332\|Ga0066388_103113760	Not Available	847	Open in IMG/M
3300005332\|Ga0066388_103501213	Not Available	801	Open in IMG/M
3300005332\|Ga0066388_104182038	Not Available	736	Open in IMG/M
3300005332\|Ga0066388_104828143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	686	Open in IMG/M
3300005764\|Ga0066903_100667426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1823	Open in IMG/M
3300005764\|Ga0066903_100847303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1644	Open in IMG/M
3300005764\|Ga0066903_101614311	Not Available	1230	Open in IMG/M
3300005764\|Ga0066903_102854263	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300005764\|Ga0066903_104120903	Not Available	778	Open in IMG/M
3300005764\|Ga0066903_104680529	Not Available	728	Open in IMG/M
3300005764\|Ga0066903_104825650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → unclassified Methylocapsa → Methylocapsa sp. S129	717	Open in IMG/M
3300005764\|Ga0066903_106472853	Not Available	610	Open in IMG/M
3300006057\|Ga0075026_100351296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	817	Open in IMG/M
3300009792\|Ga0126374_10806095	Not Available	718	Open in IMG/M
3300010047\|Ga0126382_10992481	Not Available	735	Open in IMG/M
3300010358\|Ga0126370_11287099	Not Available	684	Open in IMG/M
3300010366\|Ga0126379_10028094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4342	Open in IMG/M
3300010376\|Ga0126381_101129094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1132	Open in IMG/M
3300010376\|Ga0126381_101148751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1122	Open in IMG/M
3300010376\|Ga0126381_101747888	Not Available	898	Open in IMG/M
3300010376\|Ga0126381_102607330	Not Available	723	Open in IMG/M
3300010376\|Ga0126381_103877056	Not Available	584	Open in IMG/M
3300010937\|Ga0137776_1622994	Not Available	535	Open in IMG/M
3300012200\|Ga0137382_10529842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	838	Open in IMG/M
3300012208\|Ga0137376_10533034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	1018	Open in IMG/M
3300012359\|Ga0137385_11037299	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	676	Open in IMG/M
3300012971\|Ga0126369_10093117	All Organisms → cellular organisms → Bacteria	2707	Open in IMG/M
3300012971\|Ga0126369_11311174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	814	Open in IMG/M
3300016294\|Ga0182041_10243176	Not Available	1460	Open in IMG/M
3300016319\|Ga0182033_10020533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4012	Open in IMG/M
3300016319\|Ga0182033_10738007	Not Available	864	Open in IMG/M
3300016319\|Ga0182033_11142385	Not Available	697	Open in IMG/M
3300016341\|Ga0182035_10213588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1534	Open in IMG/M
3300016341\|Ga0182035_10378817	Not Available	1184	Open in IMG/M
3300016341\|Ga0182035_10519627	Not Available	1019	Open in IMG/M
3300016341\|Ga0182035_10722618	Not Available	869	Open in IMG/M
3300016341\|Ga0182035_10768993	Not Available	843	Open in IMG/M
3300016341\|Ga0182035_11889454	Not Available	541	Open in IMG/M
3300016357\|Ga0182032_11269192	Not Available	635	Open in IMG/M
3300016371\|Ga0182034_11663763	Not Available	561	Open in IMG/M
3300016371\|Ga0182034_12045973	Not Available	506	Open in IMG/M
3300016387\|Ga0182040_10646282	Not Available	860	Open in IMG/M
3300016422\|Ga0182039_10326871	Not Available	1280	Open in IMG/M
3300016445\|Ga0182038_10158294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1738	Open in IMG/M
3300016445\|Ga0182038_10415853	Not Available	1130	Open in IMG/M
3300017822\|Ga0187802_10374615	Not Available	561	Open in IMG/M
3300017924\|Ga0187820_1197689	Not Available	626	Open in IMG/M
3300017970\|Ga0187783_10443317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	943	Open in IMG/M
3300017974\|Ga0187777_10063635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2383	Open in IMG/M
3300018007\|Ga0187805_10179027	All Organisms → cellular organisms → Bacteria → Proteobacteria	967	Open in IMG/M
3300018058\|Ga0187766_11148668	Not Available	560	Open in IMG/M
3300018058\|Ga0187766_11194952	Not Available	550	Open in IMG/M
3300018060\|Ga0187765_10053040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2093	Open in IMG/M
3300018060\|Ga0187765_10536545	Not Available	746	Open in IMG/M
3300018062\|Ga0187784_10736486	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300018085\|Ga0187772_10952423	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300018085\|Ga0187772_11323877	Not Available	533	Open in IMG/M
3300020150\|Ga0187768_1067264	Not Available	804	Open in IMG/M
3300021560\|Ga0126371_12027904	Not Available	692	Open in IMG/M
3300026945\|Ga0207743_1032370	Not Available	529	Open in IMG/M
3300027680\|Ga0207826_1158550	Not Available	617	Open in IMG/M
3300031057\|Ga0170834_104267515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300031128\|Ga0170823_15605640	Not Available	999	Open in IMG/M
3300031545\|Ga0318541_10255787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	973	Open in IMG/M
3300031564\|Ga0318573_10446857	Not Available	695	Open in IMG/M
3300031572\|Ga0318515_10225685	Not Available	1005	Open in IMG/M
3300031680\|Ga0318574_10285241	Not Available	958	Open in IMG/M
3300031708\|Ga0310686_110866821	All Organisms → cellular organisms → Bacteria	2107	Open in IMG/M
3300031719\|Ga0306917_10014302	All Organisms → cellular organisms → Bacteria	4684	Open in IMG/M
3300031719\|Ga0306917_10467911	All Organisms → cellular organisms → Bacteria → Proteobacteria	988	Open in IMG/M
3300031724\|Ga0318500_10166518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1044	Open in IMG/M
3300031744\|Ga0306918_10038961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3076	Open in IMG/M
3300031744\|Ga0306918_10045518	All Organisms → cellular organisms → Bacteria → Proteobacteria	2882	Open in IMG/M
3300031744\|Ga0306918_10199336	Not Available	1508	Open in IMG/M
3300031744\|Ga0306918_10229027	Not Available	1411	Open in IMG/M
3300031748\|Ga0318492_10312343	All Organisms → cellular organisms → Bacteria → Proteobacteria	819	Open in IMG/M
3300031751\|Ga0318494_10953365	Not Available	504	Open in IMG/M
3300031753\|Ga0307477_10906972	Not Available	581	Open in IMG/M
3300031754\|Ga0307475_11370493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	546	Open in IMG/M
3300031771\|Ga0318546_10992736	Not Available	591	Open in IMG/M
3300031779\|Ga0318566_10628743	Not Available	522	Open in IMG/M
3300031781\|Ga0318547_10972422	Not Available	530	Open in IMG/M
3300031793\|Ga0318548_10636943	Not Available	518	Open in IMG/M
3300031833\|Ga0310917_10127722	Not Available	1661	Open in IMG/M
3300031879\|Ga0306919_10172239	Not Available	1593	Open in IMG/M
3300031879\|Ga0306919_10578576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	866	Open in IMG/M
3300031879\|Ga0306919_10640536	Not Available	819	Open in IMG/M
3300031890\|Ga0306925_10156990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2449	Open in IMG/M
3300031890\|Ga0306925_11298103	Not Available	723	Open in IMG/M
3300031890\|Ga0306925_11805130	Not Available	585	Open in IMG/M
3300031896\|Ga0318551_10764223	Not Available	561	Open in IMG/M
3300031896\|Ga0318551_10766770	Not Available	560	Open in IMG/M
3300031897\|Ga0318520_10326608	Not Available	928	Open in IMG/M
3300031910\|Ga0306923_10189464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2350	Open in IMG/M
3300031910\|Ga0306923_11627753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	670	Open in IMG/M
3300031910\|Ga0306923_11988006	Not Available	590	Open in IMG/M
3300031910\|Ga0306923_12258878	Not Available	544	Open in IMG/M
3300031941\|Ga0310912_10221305	Not Available	1451	Open in IMG/M
3300031941\|Ga0310912_11124886	Not Available	599	Open in IMG/M
3300031942\|Ga0310916_10739273	Not Available	831	Open in IMG/M
3300031942\|Ga0310916_10922437	Not Available	731	Open in IMG/M
3300031942\|Ga0310916_11649893	Not Available	519	Open in IMG/M
3300031947\|Ga0310909_10436308	Not Available	1099	Open in IMG/M
3300031954\|Ga0306926_10633304	Not Available	1303	Open in IMG/M
3300031954\|Ga0306926_12648605	Not Available	546	Open in IMG/M
3300031962\|Ga0307479_10193883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2000	Open in IMG/M
3300031981\|Ga0318531_10032051	Not Available	2164	Open in IMG/M
3300032010\|Ga0318569_10025557	Not Available	2421	Open in IMG/M
3300032035\|Ga0310911_10108459	Not Available	1529	Open in IMG/M
3300032035\|Ga0310911_10627543	Not Available	623	Open in IMG/M
3300032035\|Ga0310911_10932970	Not Available	500	Open in IMG/M
3300032039\|Ga0318559_10594364	Not Available	516	Open in IMG/M
3300032043\|Ga0318556_10448301	Not Available	675	Open in IMG/M
3300032052\|Ga0318506_10048819	All Organisms → cellular organisms → Bacteria	1701	Open in IMG/M
3300032055\|Ga0318575_10471585	Not Available	637	Open in IMG/M
3300032076\|Ga0306924_10466483	Not Available	1441	Open in IMG/M
3300032076\|Ga0306924_10475677	Not Available	1425	Open in IMG/M
3300032076\|Ga0306924_11169174	Not Available	834	Open in IMG/M
3300032076\|Ga0306924_12261429	Not Available	552	Open in IMG/M
3300032076\|Ga0306924_12275837	Not Available	550	Open in IMG/M
3300032091\|Ga0318577_10036683	Not Available	2147	Open in IMG/M
3300033289\|Ga0310914_11822177	Not Available	513	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.31%
Aquatic	Environmental → Aquatic	4.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.31%
Freshwater	Environmental → Aquatic → Freshwater	3.12%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.78%
Sediment	Environmental → Aquatic → Sediment	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.78%
Loam	Environmental → Terrestrial → Soil → Loam	11.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.12%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	63.28%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.34%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.78%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.38%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.34%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.34%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.34%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.56%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.78%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026945	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 55 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1008132561	3300004152	Bog Forest Soil	MGVMKYPWLAVIAILLSAGAADAADATTYKDIAGQWCGDVTDYVFTPNTLTVKFHDGRPANVFKITKYTYT
Ga0066388_1016102675	3300005332	Tropical Forest Soil	MKYPWLVAIAILPLVGAADIADAMTYKDIAGQWCGDVTDYVFTPNTLTVKF
Ga0066388_1031137601	3300005332	Tropical Forest Soil	MKYSRLAAIAILLSAGATEIAAATTYKGIAGQWCGDVTDYIFTPGSLTVKFHDGRPANLFKITKYTYTNNSVRIDWHQRCRQRVGHSLR*
Ga0066388_1035012132	3300005332	Tropical Forest Soil	MKNPWLVAIAILPSVGAADIADAMTYKDIARQWCGDVTDYVFTPDALTVKFHDRRPAIRQPRQ*
Ga0066388_1041820382	3300005332	Tropical Forest Soil	VKYPWLVAITILLLVGAADVADATTYKDIAGQWCGDVTDYVFAPDTLTVKFHDARPANLFKITKYTYT
Ga0066388_1048281433	3300005332	Tropical Forest Soil	MKYPWLAVIAILLPAGAADIAAAMTYKDIAGSWCGDVTDYVFTPKTLTVKFHDGRPANVFKITKYTYTNDSVRID
Ga0066903_1006674263	3300005764	Tropical Forest Soil	MKNPWLLAIAILPSVGAADIADAMTYKDVAGQWCGDVTDYIFAPDALTVKFHDGRPANVFKITKYTYTNNSVRIDWLNDAGKESVTVFAEFVG
Ga0066903_1008473031	3300005764	Tropical Forest Soil	VKYPWLVTIVILPLVSAADIADATTYKDIAGQWCGDVTDYVFAPDTLTVKFHDARPANMF
Ga0066903_1016143113	3300005764	Tropical Forest Soil	MKYSWLAAIAILLSAGAAEIADATTDIAGPWCGDVTDYVFTPNTLTVKFHDRRPANVFKITARYLRSAAAAQRA*
Ga0066903_1028542632	3300005764	Tropical Forest Soil	MKYPWLVAIAILSSVGAADSADAMTYKDIAGQRCGDVTDYVFTPDTLTVKFHDRRPANVFKITKYTYTNNSVRIDWLNDAGPHGPE*
Ga0066903_1041209032	3300005764	Tropical Forest Soil	MLRASFCLTVGAADIADAMTYKDIAGQWCGDVTGYVFTPNSLTVKFHDGRPDNVFKIMKYTYTDDSVRINWLNG
Ga0066903_1046805291	3300005764	Tropical Forest Soil	MKYFWLATVAILLSAGAADIGNATTYEDIAGQWCGDVTDYVFAPNTLTVRFHDDRPANVFKITKYTYTNDSVRIDWLNADGKESVTVFAEFSGKAMA
Ga0066903_1048256501	3300005764	Tropical Forest Soil	MKYSSLAMLGAIAILLSASVADMADATTYKDIVGQWCGDVTD
Ga0066903_1064728531	3300005764	Tropical Forest Soil	MKYFWLATIAILLSVGAADIANATTYEDIAGQWCGDVTDYVFTPNTLTVRFHDDRPANVFKIMKYTYTNDSVRIDWL
Ga0075026_1003512962	3300006057	Watersheds	MKYGWLAAIATLLSAGAADIADATTYKDIAGQWCGDVTDYVFTPNTLTVKFHDGRPANVFKITKYTYTNDSVSIDWLNGDGKRVGHGFR*
Ga0126374_108060951	3300009792	Tropical Forest Soil	MKYPWLVAIAILSSVGAADSADAMTYKDIAGQWCGDVTDYVFTSDTLTVKFHDSRPANVFKITKYTYTNNSVRIDWLNDAGKESVTVFAEFV
Ga0126382_109924812	3300010047	Tropical Forest Soil	MKYPWLVAIAILPWVGAADIADAMTYKDIAGQWCGDVTDYVFAPNTLTVKFHDNRPANVFKIT
Ga0126370_112870991	3300010358	Tropical Forest Soil	MKYPWLVAIAILPLVGAADIADAMTYKDIAGQWCGDVTDYVFTPNTLTVKFHDGRP
Ga0126379_100280941	3300010366	Tropical Forest Soil	MKCPWLVAIAILSSVGAADSADAMTYKDIAGQWCGDVTDYVFRSDTLTVKFHDSRPANVFQITKYTYTNNSVRIDWLNDTGKESVTIFAEF
Ga0126381_1011290941	3300010376	Tropical Forest Soil	MKYSWLAAIAILLSVGAAEIADAATYKDIAGQWCGDVTDYAFTPNTLTVKFHNGRPANVFKITARYLRSAAAAQRA*
Ga0126381_1011487513	3300010376	Tropical Forest Soil	MKNPWLVAIAILPSVGAADIVDAMTYKDIGGQWCGNVTDYVFTPDALTVKFHDGRTANVFKITKYTYTNNGVRIDWLNDA
Ga0126381_1017478881	3300010376	Tropical Forest Soil	MKYPWLVAIAILPLVGAADIADAMTYKDIAGQWCGDVTDYVFTPNTLTVKFHDGRPANVFKITKYTYTNDSVRIDWLNDVGKESVTVFAEFGGNT
Ga0126381_1026073301	3300010376	Tropical Forest Soil	MKYPWLVAIAILSSVGAADSADAMTYKDIAGQRCGDVTDYVFTPDTLTVKFHDR
Ga0126381_1038770562	3300010376	Tropical Forest Soil	MKNVWLVAIAILLSVGAADIADAMTYKDIAGKWCGDVTDYVFTPDALNVKFHDGRPANVFKINKYTYTDNSVRIDWLNGAGKA
Ga0137776_16229942	3300010937	Sediment	MRYAWLAAIAISLSAGAAYPANAVAYKDIAGQWCGDVTDYVFTPNTLTVKFHDGRPANAFKITKYTYTNDSVSIDWVNAAGKGSVTVFAEFG
Ga0137382_105298422	3300012200	Vadose Zone Soil	VLRGCLKYGWLAAIATLLSAGAADIADATTYKDIAGQWCGDVTDYVFTPNTLP*
Ga0137376_105330341	3300012208	Vadose Zone Soil	VLRGCLKYGWLAAIATLLSAGAADIADATTYKDIAGQWCGDVTDYV
Ga0137385_110372991	3300012359	Vadose Zone Soil	MKYLWLLAIVILPSVGAADTADAMTHKDIAGQWCGDVTDYVFTPDTLTVKFHDSRPANVFKITKYTYTNNSVRIDW
Ga0126369_100931171	3300012971	Tropical Forest Soil	MKHPWLVAIAILPSVGAADIADATTHKDIAGLWCGDVTDYVFTPNTLTVKFHDGRPASVFKITKYTYTNDSVRIDWLNSAGKE
Ga0126369_113111741	3300012971	Tropical Forest Soil	MKHPWLVAIAILPSIGAADIADATTYKDIAGQWCGDVTDYVFAPNTLTVKFHDGRPASVFKITKYTYTNDSVRIDWLNSAGKE
Ga0182041_102431761	3300016294	Soil	MKNPWLVAIAILPSLGAADIADPMTYKDIAGQWCGDVTDYVFTPDALTVKFHDRRPANVFKITKYTYTDNSVRIDWLNDAGKESVTVFAEFIGNAT
Ga0182041_107041252	3300016294	Soil	MKYFWLATVAILLSAGAADIDNATTYEGIAGQWCGDVTDYVFTPNTLTV
Ga0182033_100205331	3300016319	Soil	MKYPWLVAIAILPLVGAPDSAGAMTYKDIAGQWCGDVTDYVFTPDTL
Ga0182033_107380072	3300016319	Soil	MKNPWLLAIAILPSVGAADIADAMTYKDVAGQWCGDVTDYIFTPDALTVKFHDGRPANVFKITKYTYTNNSVRIDWLNDAGKESVTVFAE
Ga0182033_111423851	3300016319	Soil	MKYASLAAIAILLSAGVANIADAMTYKDIAGQWCGDVTDYVFTPSTLTVKFHDGRPANVFKITKYTYTND
Ga0182035_102135881	3300016341	Soil	MKNPWLLAIAILPSVGAADIADAMTYKDVAGQWCGDVTDYIFTPDALTVKFHDGRPANVFKITKYTYTN
Ga0182035_103788172	3300016341	Soil	MKYFWLATVAILLSAGAADIANATTYEGIAGQWCGDVTDYVFTPNTLTVKFHDARPA
Ga0182035_105196272	3300016341	Soil	MPPGKAYNRVIMKYPWLAVIAILLSAGAADIADATTYKDIAGQWCGDITDYVFAPTTLTVKFHDRRPANVFKITKYTYSNDSVRIDWLN
Ga0182035_107226183	3300016341	Soil	MKYASLAAIAILLSAGVANIADAMTYKDIAGQWCGDVTDYVFTPSTLTVKFHDGRPANVFKITKYTYTNDSVSIDWLNAAGKGSVTVFAEFSSSP
Ga0182035_107689931	3300016341	Soil	MKYYWLATVAILLSAGAADIANATTYKDIAGQWCGDVTDYVFTPSTLTVKFHDGRPENVFKITKYTYTPDG
Ga0182035_118894541	3300016341	Soil	MKNPWLVAIAILPSLGAADIADPMTYKDIAGQWCGDVTDYVFTPDALTVKFHDRRPANVFKITKYTYSNDSVRIDWLNSAGK
Ga0182032_112691923	3300016357	Soil	MKYPWLVAIAILSSVGATGSADAMTYKDIAGQWCGDVTDYVFTPDTLTVKFHD
Ga0182034_116637631	3300016371	Soil	MKYPWLVAIAILPSVGAADSADAMTYKDIAGQWCGDVTDYVFTPDTLTVKFHDS
Ga0182034_120459732	3300016371	Soil	MKYPWLVAIAILPSVGAADIADATTHKDIAGQWCGDVTDYVFTPNTLTVKFH
Ga0182040_106462822	3300016387	Soil	MKYPWLVAIAILPSVGAADIAAATTHKDLAGQWCGDVTDYVFTPTTLPVKFL
Ga0182039_103268711	3300016422	Soil	MKNPWLVAIAILPSLGAADIADPMTYKDIAGQWCGDVTDYVFTPDALTVKFHDRRPANVFKITKYTYTDNSVRIDWLNDAGKESVTV
Ga0182038_101582943	3300016445	Soil	MKYPWLVAIAILPLVGAPDSAGAMTYKDIAGQWCGDVTDYVFTPDTLTVKFHDSRPANVFKITKY
Ga0182038_104158531	3300016445	Soil	MKYASLAAIAILLSAGVANIADAMTYKDIAGQWCGDVTDYVFTPST
Ga0187802_103746152	3300017822	Freshwater Sediment	MKYPWLAAIIFLLSADIADATTYKDIAGQWCGETTDYVFAPNSLTVKFHDS
Ga0187820_11976892	3300017924	Freshwater Sediment	MKYPWLAAIAFLLSADIADATTYKDIAGQWCGETTDYVFAPNSLTVKFHDSRPAKTFKIT
Ga0187783_104433173	3300017970	Tropical Peatland	MKYGWIAAIAILLSTGAADTADAVTFKDIAGQWCGDVTDYVFTPNTLTVKFHDGRPANAFKITKY
Ga0187777_100636351	3300017974	Tropical Peatland	MKYFWLATVAILLSAGAADTAHATTYKDIAGQWCGDVTDYVFTPSTLTVKFHDGRPENVFTITKY
Ga0187805_101790271	3300018007	Freshwater Sediment	MKYPWLAATAILASAGAADISEATTYKDIAGQWCGEITDYVFAPSSLTVKFHDGRPA
Ga0187766_111486681	3300018058	Tropical Peatland	MKYAWIAAIAILLSTGAADTANAVTFRDIAGQWCGDVTDYVFTPNTVTVKFHDGRPANAFKITKYTYTNDSVSIDWVNAAGKGSVTVFRGIRRQSYHDGPAAE
Ga0187766_111949521	3300018058	Tropical Peatland	MKYAWLAAIAILLSDGAANIADATTYKDIAGQWCGDVTDYVFTPNTLTVKFHDGGPANAFKITKYTYTND
Ga0187765_100530403	3300018060	Tropical Peatland	MKYFWLATVAILLSAGAADTAHATTYKDIAGQWCGDVTDYVFTPSTLTVKFHDDRPENVFKIT
Ga0187765_105365451	3300018060	Tropical Peatland	MKYAWLAAIAILLSASAADIAGAVTYKDIAGQWCGDVTDYVFTPSTLTVKFHDGRPANAFKITKYTYT
Ga0187784_107364862	3300018062	Tropical Peatland	MKYLWLAAIAFLLSADIADAMTYKNIAGQWCGETTDYAFAPNSLTVKFHDGRPTKTFKITKYTYDNDDVRIDWLNSAG
Ga0187772_109524232	3300018085	Tropical Peatland	MKFAWLAAIAVLLPTAADAVTYKDIAGQWCGDVTDYIFTPNTLTVKFHDGRPTNAFKITKYTYTNDRVSIDWVNGAG
Ga0187772_113238771	3300018085	Tropical Peatland	MKYAWLAAIAILLSDGAANIADATTYKDIAGQWCGDVTDYVFTPNTLTVKF
Ga0187768_10672641	3300020150	Tropical Peatland	MKYARLTAITILLSAGAADTADAVTYKDIAGQWCGDVTDYVFTPNML
Ga0126371_120279042	3300021560	Tropical Forest Soil	MKYSWLVAIAILPSVGAADIADATTHKDIAGQWCGDVTDYVFTPNTLTVKFHDGRPA
Ga0207743_10323702	3300026945	Tropical Forest Soil	MKYSWLAAIVILLSVGAAEIADATTYKDIAGQWCGDVTDYVFTPDTLTVKFHDS
Ga0207826_11585502	3300027680	Tropical Forest Soil	MKYSWLAAIVILLSVGAAEIADATTYKDIAGQWCGDVTDYVFTPDTLTVKFHDSRPANVFKITKYNYTNNSVSIDWLNDA
Ga0170834_1042675151	3300031057	Forest Soil	MKYPWLVAIAILPSVGAADSADAMTYKDIAGQWCGDVTDYVFTPDTLTVKFHDSRPANVFKITK
Ga0170823_156056401	3300031128	Forest Soil	MKYPWLVAIAILPSVGAADSADAMTYKDIAGQWCGDVTDYVFTPDTLTVKFHDSRP
Ga0318541_102539633	3300031545	Soil	MKYFWLATVAILLSAGAADIANATTYEGIAGQWCGDVTDYVF
Ga0318541_102557871	3300031545	Soil	MKYPWLVAIAILPLVGAPDSAGAMTYKDIAGQWCGDVTDYVFTPDTLTVKFHDSRPANVFKITKYTYNNNSVRIDWLNDAGKESVTVFA
Ga0318573_104468572	3300031564	Soil	MKHPWLVAIAILPSVGAADIADATTHKDIAGQWCGDVTDYVFTPNTLTVKFHDGRPASVFKITKYTYTNDSVRIDWLNSAGKESVTVF
Ga0318515_102256851	3300031572	Soil	MKYPWLAVIAILLSAGAADIADATTYKDIAGQWCGDITDYVFAPTTLTVKFHDRRPANVFKITKYTYTDNSVRIDWLNDAGKESVTVFAE
Ga0318574_102852411	3300031680	Soil	MKHPWLVAIAILPSVGAADIADATTHKDIAGQWCGDVTDYVFTPNTLTVKFHDGRPASVFKITKYTYTNDSVRIDWLNSAGKESVTVFAEFIGNTT
Ga0310686_1108668214	3300031708	Soil	MKYPWLAAIAILLSTGAADVAEATTYKDIAGQWCGEITDYVFAPSSLTVKFHDGRPAEVFKIAKYTYTN
Ga0306917_100143023	3300031719	Soil	MKYPWLVAIAILPSVGAADSADAMTYKDIAGQWCGDVTDYVFTPDTLTVKFHDSRPANVFKITKYTYTNNSVRIELTNEC
Ga0306917_104679111	3300031719	Soil	MKYPWLVAIAILSSVGATGSADAMTYKDIAGQWCGDVTDYVFTPDTLTVKFH
Ga0318500_101665181	3300031724	Soil	MKYPWLVAIAILPLVGAPDSAGAMTYKDIAGQWCGDVTDYVFTPDT
Ga0306918_100389619	3300031744	Soil	MKHPWLVAIAILPSVGAADIADATTHKDIAGLWCGDVTDYVFTPNTLTVKFHDGRPASVFKITKYTYTNDSVR
Ga0306918_100455181	3300031744	Soil	MKYPWLVAIAILPSVGAADSADAMTYKDIAGQWCGDVTDYVFTPDTLTVKFHDSR
Ga0306918_101993364	3300031744	Soil	MKYASLAAIAILLSAGVANIADAMTYKDIAGQWCGDVTDYVFTPSTLTVKFHDGRPANVFKITKYTYTNDSVSIDWLNAAGKGSVTVFAEFSSSPTTM
Ga0306918_102290271	3300031744	Soil	MKYFWLATVAILLSAGAADIANATTYEGIAGQWCGDVTDYVFTPNTLTVKFHDARPADVFKITK
Ga0318492_103123433	3300031748	Soil	MKYFWLATVAILLSAGAADIANATTYEGIAGQWCGDVTDYVFTPNTLTVKFHDARPADVFKITKYTYTNDSVRIDWLNSAGKESV
Ga0318494_109533651	3300031751	Soil	MKYFWLATVAILLSAGAADIANATAYEDIAGQWCGDVTDYVFTPNTL
Ga0307477_109069721	3300031753	Hardwood Forest Soil	MIYPRPAAIAILLSAGAANIADAMTYKDIAGQWCGDVTDYVFTPNMLTVKFHDGRPANMFKITKYTYTNDSVR
Ga0307475_113704931	3300031754	Hardwood Forest Soil	MKYPWLVAIAILPSVGAADSADAMTYKDIAGQWCGDVTDYVFTPDTLTVKFHDNRPANVFKITKYTYTNNSVRIDWLNDAGKESVTV
Ga0318509_105683241	3300031768	Soil	MKYFWLATVAILLSAGAADIANATTYEGIAGQWCGDV
Ga0318546_109927362	3300031771	Soil	MKYSWLAAIAILLPVGAADIADAMTYKDIAGQWCGDVTDYVFTPNTLTVKFRDGRPVNVFKITKYTYTNDSVRIDWLNSDDKESVTIFAEFI
Ga0318566_106287431	3300031779	Soil	MKYPWPAAIAILLSAAAANIADAMTYKDIAGQWCGDVTDYVFTPNTLTVKFHDGRPANMFKITKYTY
Ga0318547_109724221	3300031781	Soil	MKYFWLATVAILLSAGAADIANATAYEDIAGQWCGDVTDYVFTPNTLTVRFHDDRPA
Ga0318548_106369431	3300031793	Soil	MKNPWLLAIAILPSVGAADIADAMTYKDVAGQWCGDVTDYIFTPDALTVKFHDGRPANVFKITKYTYTNNSVRIDWLNDAGKESVTVF
Ga0310917_101277223	3300031833	Soil	MKYFWLATVAILLSAGAADIANATTYEGIAGQWCGDVTDYVFTPNTLTVKFHDARPADVFKITKYTYTNDSVRIDWLNSAGKESVTVFAEFRGKAMAQQ
Ga0306919_101722394	3300031879	Soil	MKYFWLATVAILLSAGAADIANATTYEGIAGQWCGDVTDYVFTPNTLTVKFHDARP
Ga0306919_105785763	3300031879	Soil	MKYPWLVAIAILPWVGAADIADAMTYKDIAGQWCGDVTDYIFTPDTLTVKFHDARPANVFKI
Ga0306919_106405361	3300031879	Soil	MKHPWLVAIAILPSVGAADIADATTHKDIAGQWCGDVTDYVFTPNTLTVKFHDGRPASVFKIA
Ga0306925_101569901	3300031890	Soil	MKYFWLATVAILLSAGAADIANATTYEGIAGQWCGDVTDYVFTPNTLTVKFHDARPADVFKITKYTYTNDSVRIDWLNSAGKESVTVF
Ga0306925_112981031	3300031890	Soil	MKYFWLATVAILLSAGAADIANATAYEDIAGQWCGDVTDYVFTPNTLTVRFHDDRPANVFKITKYAYTNDS
Ga0306925_118051302	3300031890	Soil	MKHPWLVAIAILPSVGAADIADATTHKDIAGQWCGDVTDYVFTPNTLTVKFHDGRPASVFKI
Ga0318551_107642231	3300031896	Soil	MKNPWLLAIAILPSVGAADIADAMTYKDVAGQWCGDVTDYIFTPDALTVKFHDGRPANVF
Ga0318551_107667702	3300031896	Soil	RQSRSMKYPWLVAIAILPSVGAADSADAMTYKDIAGQWCGDVTDYVFTPDTLTVKFHDSRPANVFKITKYTYTNNSVRIELTNEC
Ga0318520_103266082	3300031897	Soil	MKYFWLATVAILLSAGAADIANATTYEGIAGQWCGDVTDYVFTPNTLTVKFHDARPADV
Ga0306923_101894641	3300031910	Soil	MKNPWLLAIAILPSVGAADIADAMTYKDVAGQWCGDVTDYIFTPDALTVKFHDGRPANVFKITK
Ga0306923_116277532	3300031910	Soil	MLAGAAAGTGRHGTCFEAVMKNAWIAAIAILLSAGAADSVDAMTYKDIAGQWCGDVTDYVFTPNTLTVKFHDGRPANAFKITKYTYTNDSVSIDWVNAAGKGSVTVFAE
Ga0306923_119880061	3300031910	Soil	MKHPWLVAIAILPSVGAADIADATTHKDIAGQWCGDVTDYVFTPNTLTVKFHDGRPASVFKITKYTYTNDSVRIDWLNSAGKESVTVFAEF
Ga0306923_122588782	3300031910	Soil	MKYPWLVAIAILPLVGAADIADAMTYKDIAGQWCGDVTDYVFTPDTLTVKFHDG
Ga0310912_102213053	3300031941	Soil	MKNPWLVAIAILPSLGAADIADPMTYKDIAGQWCGDVTDYVFTPDALTVKFHDRR
Ga0310912_111248862	3300031941	Soil	MKYPWLVAIAILSSVGATGSADAMTYKDIAGQWCGDVTDYVFT
Ga0310916_107392731	3300031942	Soil	MKYARLTAITILLSAGAADTADAVAYKDIAGQWCGDVTDYVFTPNMLTVKFHDGRPANAFKITKYTYTNDSVSID
Ga0310916_109224371	3300031942	Soil	MKNPWLVAIAILPSLGAADIADPMTYKDIAGQWCGDVTDYVFTPDALTVKFHDRRPANVFKITKYTYTDNSVRIDWLNDAGK
Ga0310916_116498932	3300031942	Soil	MKYASLAAIAILLSAGVANIADAMTYKDIAGQWCGDVTDYVFTPSTLTVKFHDGRPANVFKITKYTYTNDSVSIDWLNAAGKGSVTVFAEF
Ga0310909_104363082	3300031947	Soil	MKYFWLATVAILLSAGAADIANATTYEGIAGQWCGDVTDYVFTPNTLTVKFHDARPADVFKITKYTYTNDSVRIDWLNSAGKE
Ga0306926_106333041	3300031954	Soil	MKHPWLVAIAILPSAGAADIADATTYKDIAGQWCGDVTDYVFTPNTLTVKFHDGRPANV
Ga0306926_126486052	3300031954	Soil	MKYALLAAIAILLSAGAANIADAMTYKDIAGQWCGDVTDYVFTPSTLTVKFHDGRPANAFKITKYTYTNDTVTVDWVNAAGKGSVTVFAEFGGSPA
Ga0307479_101938834	3300031962	Hardwood Forest Soil	MKYPWLAPIAILPSVGAADSADAMTYKDIAGQWCGDVTDYVFTPDTLTVKFHDSRPANVFKITKYTYTNNSVRIDWLNDAGKESVTVFAEFVGNSTTMAQ
Ga0318531_100320511	3300031981	Soil	MKYPWPAAIAILLSAGAANIADAMTYKDIAGQWCGDVTDYVFTPNTLTVKFHDGRPANMFKITKYTYTNDSVCID
Ga0306922_115803042	3300032001	Soil	MKYFWLATIAILLSAGAADIANATTYEDIAGQWCGDVTDYVFTPNTL
Ga0318569_100255573	3300032010	Soil	MKYPWPAAIAILLSAGAANIADAMTYKDIAGQWCGDVTDYVFTPNTLTVKFHDGRPANMFKI
Ga0310911_101084591	3300032035	Soil	MKYPWPAAIAILLSAGAANIADAMTYKDIAGQWCGDVTDYVFTPNTLTVKFHDGRPANMFKITKYTYTNDSVG
Ga0310911_106275433	3300032035	Soil	MKYPWLVAIAILSSVGATGSADAMTYKDIAGQWCGDVTDYVFTPDTLTVK
Ga0310911_109329701	3300032035	Soil	MKNPWLVAIAILPSLGAADIADPMTYKDIAGQWCGDVTDYVFTP
Ga0318559_105943642	3300032039	Soil	MKHPWLVAIAILPSVGAADIADATTHKDIAGQWCGDVTDYVFTPNTLTVKFHDGRPASVFKITKYTYTNDN
Ga0318556_104483013	3300032043	Soil	MKHPWLVAIAILPSVGAADIADATTHKDIAGLWCGDVTDYVSTPNTLTVKFHDGRPASVFKIT
Ga0318506_100488196	3300032052	Soil	MKHPWLVAIAILPSVGAADIADATTHKDIAGQWCGDVTDYVFTPNTLTVKFHDGRPASVFKITKYTYTNDSVRIDW
Ga0318575_104715851	3300032055	Soil	MKYFWLATVAILLSAGAADIANATAYEDIAGQWCGDVTDYVFTPNTLTVRFHDDRPANVFKITKYAYTNDSVRI
Ga0306924_104664831	3300032076	Soil	MKYFWLATVAILLSAGAADIANATTYEGIAGQWCGDVTDYVFTPNTLTVKFHDARPADVFKITKYTYTNDSVRIDWLNSAGKESVTVFAEFRGK
Ga0306924_104756773	3300032076	Soil	MKNPWLVAIAILPSLGAADIADPMTYKDIAGQWCGDVTDYVFTPDALTVKFHDRRPANVFKITKY
Ga0306924_111691741	3300032076	Soil	MKYARLTAITILLSAGAADTADAVAYKDIAGQWCGDVTDYVFTPNML
Ga0306924_122614291	3300032076	Soil	MKYPWLVAIAILSSVGATGSADAMTYKDIAGQWCGDVTDYVFTPDTLTVKFHDSRPANVFKITKYTYTNDSV
Ga0306924_122758371	3300032076	Soil	MKYSWLAAIAILLPVGAADIADAMTYKDIAGQWCGDVTDYVFTPNTLTVKFR
Ga0318577_100366831	3300032091	Soil	MKYPWPAAIAILLSAGAANIADAMTYKDIAGQWCGDVTDYVFTPNTLTVKFHDGRPANMFKITKYTYTN
Ga0310914_118221771	3300033289	Soil	MKYARLTAITILLSAGAADTADAVAYKDIPGQWCGDVTDYVFTPNTLTVKFKDGRPANA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F064305

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences