NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F064327

Metagenome / Metatranscriptome Family F064327

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F064327
Family Type Metagenome / Metatranscriptome
Number of Sequences 128
Average Sequence Length 82 residues
Representative Sequence LDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPALVEAPAVVEFRPSSREAIRAGWVVCQICGRRGRWVNPFPEVKHDF
Number of Associated Samples 83
Number of Associated Scaffolds 128

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.79 %
% of genes near scaffold ends (potentially truncated) 92.19 %
% of genes from short scaffolds (< 2000 bps) 71.88 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (96.875 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland
(28.906 % of family members)
Environment Ontology (ENVO) Unclassified
(83.594 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(53.906 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 17.86%    β-sheet: 7.14%    Coil/Unstructured: 75.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.26
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 128 Family Scaffolds
PF00665rve 34.38
PF01695IstB_IS21 17.19
PF13181TPR_8 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 128 Family Scaffolds
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 34.38
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 34.38
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 34.38
COG4584TransposaseMobilome: prophages, transposons [X] 34.38
COG1484DNA replication protein DnaCReplication, recombination and repair [L] 17.19

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.88 %
UnclassifiedrootN/A3.12 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000567|JGI12270J11330_10056577All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus2055Open in IMG/M
3300000567|JGI12270J11330_10074598All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus1648Open in IMG/M
3300001356|JGI12269J14319_10265741All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300004152|Ga0062386_101597598All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300005552|Ga0066701_10945668All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300006052|Ga0075029_100139151All Organisms → cellular organisms → Bacteria1485Open in IMG/M
3300006162|Ga0075030_100247898All Organisms → cellular organisms → Bacteria1428Open in IMG/M
3300009518|Ga0116128_1013052All Organisms → cellular organisms → Bacteria2931Open in IMG/M
3300009518|Ga0116128_1025598All Organisms → cellular organisms → Bacteria → Proteobacteria1983Open in IMG/M
3300009519|Ga0116108_1012658All Organisms → cellular organisms → Bacteria3084Open in IMG/M
3300009547|Ga0116136_1013218All Organisms → cellular organisms → Bacteria2925Open in IMG/M
3300009547|Ga0116136_1039428All Organisms → cellular organisms → Bacteria1384Open in IMG/M
3300009548|Ga0116107_1010426All Organisms → cellular organisms → Bacteria3981Open in IMG/M
3300009614|Ga0116104_1124182All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300009615|Ga0116103_1011710All Organisms → cellular organisms → Bacteria2961Open in IMG/M
3300009621|Ga0116116_1043413All Organisms → cellular organisms → Bacteria1397Open in IMG/M
3300009639|Ga0116122_1230423All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300009643|Ga0116110_1024493All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus2307Open in IMG/M
3300009760|Ga0116131_1015019All Organisms → cellular organisms → Bacteria2954Open in IMG/M
3300009760|Ga0116131_1094962All Organisms → cellular organisms → Bacteria899Open in IMG/M
3300009824|Ga0116219_10104381All Organisms → cellular organisms → Bacteria1653Open in IMG/M
3300009839|Ga0116223_10059072All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus2482Open in IMG/M
3300009839|Ga0116223_10218263All Organisms → cellular organisms → Bacteria1159Open in IMG/M
3300010379|Ga0136449_100730368All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus1653Open in IMG/M
3300010379|Ga0136449_101433817All Organisms → cellular organisms → Bacteria1063Open in IMG/M
3300010379|Ga0136449_103667455All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300012207|Ga0137381_10126191All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus2189Open in IMG/M
3300012208|Ga0137376_11374084All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300012359|Ga0137385_10586890All Organisms → cellular organisms → Bacteria938Open in IMG/M
3300014152|Ga0181533_1041489All Organisms → cellular organisms → Bacteria2490Open in IMG/M
3300014152|Ga0181533_1092011All Organisms → cellular organisms → Bacteria1378Open in IMG/M
3300014155|Ga0181524_10256634All Organisms → cellular organisms → Bacteria818Open in IMG/M
3300014156|Ga0181518_10040602All Organisms → cellular organisms → Bacteria2889Open in IMG/M
3300014156|Ga0181518_10235359Not Available937Open in IMG/M
3300014158|Ga0181521_10090811All Organisms → cellular organisms → Bacteria1907Open in IMG/M
3300014158|Ga0181521_10351357All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300014158|Ga0181521_10560662All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300014158|Ga0181521_10598176All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300014159|Ga0181530_10189483All Organisms → cellular organisms → Bacteria1140Open in IMG/M
3300014494|Ga0182017_10063606All Organisms → cellular organisms → Bacteria2444Open in IMG/M
3300016730|Ga0181515_1109811All Organisms → cellular organisms → Bacteria999Open in IMG/M
3300016730|Ga0181515_1209878All Organisms → cellular organisms → Bacteria2394Open in IMG/M
3300017925|Ga0187856_1025245All Organisms → cellular organisms → Bacteria2931Open in IMG/M
3300017931|Ga0187877_1047303All Organisms → cellular organisms → Bacteria1989Open in IMG/M
3300017935|Ga0187848_10147882All Organisms → cellular organisms → Bacteria1036Open in IMG/M
3300017935|Ga0187848_10269894All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300017935|Ga0187848_10320130All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300017948|Ga0187847_10892053All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300017961|Ga0187778_11262475All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300017970|Ga0187783_10495115All Organisms → cellular organisms → Bacteria886Open in IMG/M
3300017972|Ga0187781_10418618All Organisms → cellular organisms → Bacteria958Open in IMG/M
3300017972|Ga0187781_10420486All Organisms → cellular organisms → Bacteria955Open in IMG/M
3300017996|Ga0187891_1028117All Organisms → cellular organisms → Bacteria2563Open in IMG/M
3300017996|Ga0187891_1030338All Organisms → cellular organisms → Bacteria2438Open in IMG/M
3300017996|Ga0187891_1216404All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300018002|Ga0187868_1158407All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300018002|Ga0187868_1289909All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300018003|Ga0187876_1086955All Organisms → cellular organisms → Bacteria1188Open in IMG/M
3300018003|Ga0187876_1167508All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300018005|Ga0187878_1267016All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300018007|Ga0187805_10028925All Organisms → cellular organisms → Bacteria → Proteobacteria2455Open in IMG/M
3300018008|Ga0187888_1171897All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300018008|Ga0187888_1242220All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300018008|Ga0187888_1369463All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300018009|Ga0187884_10037544All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus2356Open in IMG/M
3300018009|Ga0187884_10201312Not Available821Open in IMG/M
3300018013|Ga0187873_1270683All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300018016|Ga0187880_1437112All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300018017|Ga0187872_10227523All Organisms → cellular organisms → Bacteria846Open in IMG/M
3300018017|Ga0187872_10384502All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300018019|Ga0187874_10137096All Organisms → cellular organisms → Bacteria1042Open in IMG/M
3300018019|Ga0187874_10220498All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300018020|Ga0187861_10097388All Organisms → cellular organisms → Bacteria1425Open in IMG/M
3300018020|Ga0187861_10376964All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300018022|Ga0187864_10035098All Organisms → cellular organisms → Bacteria2931Open in IMG/M
3300018022|Ga0187864_10039187All Organisms → cellular organisms → Bacteria2738Open in IMG/M
3300018022|Ga0187864_10351284All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300018022|Ga0187864_10448157All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300018030|Ga0187869_10263780All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300018033|Ga0187867_10168915All Organisms → cellular organisms → Bacteria1253Open in IMG/M
3300018034|Ga0187863_10254094All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300018040|Ga0187862_10669004All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300018062|Ga0187784_10696876All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300018062|Ga0187784_10725552All Organisms → cellular organisms → Bacteria794Open in IMG/M
3300018062|Ga0187784_11284432All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300018062|Ga0187784_11690243All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300018085|Ga0187772_10464201All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium889Open in IMG/M
3300018086|Ga0187769_10650199All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300018086|Ga0187769_10675121All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300018090|Ga0187770_10360881All Organisms → cellular organisms → Bacteria1137Open in IMG/M
3300025419|Ga0208036_1005185All Organisms → cellular organisms → Bacteria3586Open in IMG/M
3300025419|Ga0208036_1006769All Organisms → cellular organisms → Bacteria2958Open in IMG/M
3300025444|Ga0208189_1071973All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300025448|Ga0208037_1008257All Organisms → cellular organisms → Bacteria3067Open in IMG/M
3300025500|Ga0208686_1008607All Organisms → cellular organisms → Bacteria2952Open in IMG/M
3300025500|Ga0208686_1034471All Organisms → cellular organisms → Bacteria1241Open in IMG/M
3300026451|Ga0247845_1020996All Organisms → cellular organisms → Bacteria1083Open in IMG/M
3300027854|Ga0209517_10055537All Organisms → cellular organisms → Bacteria2940Open in IMG/M
3300027854|Ga0209517_10089400All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus2108Open in IMG/M
3300027882|Ga0209590_10028906All Organisms → cellular organisms → Bacteria2904Open in IMG/M
3300027905|Ga0209415_11033161All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300028774|Ga0302208_10071422All Organisms → cellular organisms → Bacteria860Open in IMG/M
3300029945|Ga0311330_11344952All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300030659|Ga0316363_10064538All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus1699Open in IMG/M
3300030659|Ga0316363_10072980All Organisms → cellular organisms → Bacteria1574Open in IMG/M
3300030706|Ga0310039_10164488All Organisms → cellular organisms → Bacteria890Open in IMG/M
3300030707|Ga0310038_10445824All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300031234|Ga0302325_13162510All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300031240|Ga0265320_10043247All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus2228Open in IMG/M
3300032042|Ga0318545_10031215All Organisms → cellular organisms → Bacteria1746Open in IMG/M
3300032054|Ga0318570_10165936All Organisms → cellular organisms → Bacteria991Open in IMG/M
3300032160|Ga0311301_10313922All Organisms → cellular organisms → Bacteria2494Open in IMG/M
3300032829|Ga0335070_11769143All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300033402|Ga0326728_10544594All Organisms → cellular organisms → Bacteria925Open in IMG/M
3300033402|Ga0326728_10906644All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300033433|Ga0326726_10160189All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus2058Open in IMG/M
3300033755|Ga0371489_0038058All Organisms → cellular organisms → Bacteria3408Open in IMG/M
3300033977|Ga0314861_0034690All Organisms → cellular organisms → Bacteria2958Open in IMG/M
3300033977|Ga0314861_0083340All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1670Open in IMG/M
3300033977|Ga0314861_0118614All Organisms → cellular organisms → Bacteria1327Open in IMG/M
3300033977|Ga0314861_0135857All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomicrobium → unclassified Methylomicrobium → Methylomicrobium sp. wino11215Open in IMG/M
3300033977|Ga0314861_0273615All Organisms → cellular organisms → Bacteria769Open in IMG/M
3300033977|Ga0314861_0307362All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium713Open in IMG/M
3300033977|Ga0314861_0328963All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300033982|Ga0371487_0251185All Organisms → cellular organisms → Bacteria818Open in IMG/M
3300033983|Ga0371488_0040176All Organisms → cellular organisms → Bacteria3028Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland28.91%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland14.84%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil14.06%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland9.38%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog8.59%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland5.47%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil4.69%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.12%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.56%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.78%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.78%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.78%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.78%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.78%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.78%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.78%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.78%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300009518Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150EnvironmentalOpen in IMG/M
3300009519Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150EnvironmentalOpen in IMG/M
3300009547Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40EnvironmentalOpen in IMG/M
3300009548Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100EnvironmentalOpen in IMG/M
3300009614Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150EnvironmentalOpen in IMG/M
3300009615Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100EnvironmentalOpen in IMG/M
3300009621Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150EnvironmentalOpen in IMG/M
3300009639Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40EnvironmentalOpen in IMG/M
3300009643Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40EnvironmentalOpen in IMG/M
3300009760Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100EnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300014152Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaGEnvironmentalOpen in IMG/M
3300014155Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaGEnvironmentalOpen in IMG/M
3300014156Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaGEnvironmentalOpen in IMG/M
3300014158Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaGEnvironmentalOpen in IMG/M
3300014159Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaGEnvironmentalOpen in IMG/M
3300014160Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaGEnvironmentalOpen in IMG/M
3300014494Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaGEnvironmentalOpen in IMG/M
3300016730Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017925Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40EnvironmentalOpen in IMG/M
3300017931Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100EnvironmentalOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017996Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40EnvironmentalOpen in IMG/M
3300018002Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40EnvironmentalOpen in IMG/M
3300018003Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40EnvironmentalOpen in IMG/M
3300018005Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150EnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018008Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40EnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018013Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100EnvironmentalOpen in IMG/M
3300018016Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40EnvironmentalOpen in IMG/M
3300018017Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40EnvironmentalOpen in IMG/M
3300018019Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150EnvironmentalOpen in IMG/M
3300018020Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100EnvironmentalOpen in IMG/M
3300018022Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40EnvironmentalOpen in IMG/M
3300018030Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100EnvironmentalOpen in IMG/M
3300018033Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018040Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300025419Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025444Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025448Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025500Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)EnvironmentalOpen in IMG/M
3300026451Peat soil microbial communities from Stordalen Mire, Sweden - P.F.S.T-25EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300028774Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E2_3EnvironmentalOpen in IMG/M
3300029945I_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300030659Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)EnvironmentalOpen in IMG/M
3300030706Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)EnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031240Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaGHost-AssociatedOpen in IMG/M
3300032042Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26EnvironmentalOpen in IMG/M
3300032054Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033755Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fractionEnvironmentalOpen in IMG/M
3300033977Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75EnvironmentalOpen in IMG/M
3300033982Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fractionEnvironmentalOpen in IMG/M
3300033983Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fractionEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12270J11330_1005657733300000567Peatlands SoilRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPTPARVEAPAVVEFRPSPREVIRAGWVVCQICGCRGRWVNPFPEVKHDF*
JGI12270J11330_1007459833300000567Peatlands SoilRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPALVEAPAVVEFRPSSREAIRPGWVVCQICGRRGRWVNPFPEVKHDFR*
JGI12269J14319_1026574123300001356Peatlands SoilRQRQREYRQRLRARVTDQSSLRASPCVNLTVPPAPEMVEATPGPDLRPSPDGETSPGWVVCQICGRRGHWVNPFXEVEHDY*
Ga0062386_10159759823300004152Bog Forest SoilRVTDQSSLRSSPCVNLTVRPTPARVEAPAVVEFRPSPREAIRAGWVVCQICGRRGRWVNPFPEVKHDF*
Ga0066701_1094566823300005552SoilRRLKARVTDKSSLRASPYVNLPLPPAREPVEVTPASLDCLPSLGPECAPGWVVCQICGRRGRWVNPFPEVKHDFR*
Ga0075029_10013915113300006052WatershedsHRQRQREYRQRLKARVTDQSSLPTSPCVNLTAPSVPQRVEAPLAADFSPAQAEYTASGVLCQICGRRGQWVNPFPEVKHDCR*
Ga0075030_10024789823300006162WatershedsANRRYQQSLGLEGRLDHRQRLKARVTDQSSLPTSPCVNLTAPSVPQRVEAPLAADFSPAQAEYTASGVLCQICGRRGQWVNPFPEVKHDCR*
Ga0116128_101305213300009518PeatlandGLEGRLDHRQRQREYRQRLKARVTDQSSLRASPCVNLTAPPTPEPAEAPPASDFFPGSDAEYAARWVVCQICGRRGRWVNPFPEVKHDCR*
Ga0116128_102559813300009518PeatlandEGRLDHRQRQREYRQRLKARVTDQSSLRASPCVNLTAPPAPEPAEAPPAAVFSPGSDAEYAASWVICQICGRRGRWINPFPEVKYDCR*
Ga0116108_101265813300009519PeatlandGLEGRLDHRQRQREYRQRLKARVTDQSSLRASPCVNLTAPPAPEPAEAPPAAVFSPGSDAEYAASWVICQICGRRGRWINPFPEVKYDCR*
Ga0116136_101321813300009547PeatlandEGRLDHRQRQREYRQRLKARVTDQSSLRASPCVNLTAPPTPEPAEAPPASDFFPGSDAEYAARWVVCQICGRRGRWVNPFPEVKHDCR*
Ga0116136_103942823300009547PeatlandLDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPALVEAPAVVEFRPSSREAIRAGWVVCQICGRRGRWVNPFPEVKHDF*
Ga0116107_101042673300009548PeatlandLDHRQRQREYRQRLKARVTDQSSLRASPCVNLTAPPAPEPAEAPPAAVFSPGSDAEYAASWVICQICGRRGRWINPFPEVKYDCR*
Ga0116104_112418213300009614PeatlandRRYEQSLGPEGRLDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVPPAREPITAAPAPNLRPSPGAETPTGWVVCEICGRRGHWINPFPEVKHDFR*
Ga0116103_101171013300009615PeatlandEANRRYQQSLGLEGRLDHRQRQREYRQRLKARVTDQSSLRASPCVNLTAPPTPEPAEAPPASDFFPGSDAEYAARWVVCQICGRRGRWVNPFPEVKHDCR*
Ga0116116_104341323300009621PeatlandGLDGRLDHRQRQHEYRQRLRVRVTDQSSLRPSPCVNLTVPPAREPITAAPAPNLRPSPGAETPTGWVVCEICGRRGHWINPFPEVKHDFR*
Ga0116122_123042323300009639PeatlandLGLEGRLDHRQRQREYRQRLKARVTDQSSLRASPYVNLTAPPIPQPAEAPVAAVFPPGSEAEYTASGVVCQICGRRGRWVNPFPEVKHDFR*
Ga0116110_102449313300009643PeatlandDQSSLRSSPCVNLTVRPAPALVDAPAVVEYRPSSREAIRAGWVVCQICGRRGRWVNPFPEVKHDF*
Ga0116131_101501913300009760PeatlandRRYQQSLGLEGRLDHRQRQREYRQRLKARVTDQSSLRASPCVNLTAPPTPEPAEAPPASDFFPGSDAEYAARWVVCQICGRRGRWVNPFPEVKHDCR*
Ga0116131_109496213300009760PeatlandRRYQQSLGLEGRLDHRQRQREYRQRLKARVTDQSSLRASPYVNLTAPPAPEPVEAPPAAVFSPGSDAEYAASWVICQICGRRGRWINPFPEVKYDCR*
Ga0116219_1010438113300009824Peatlands SoilQREYRQRLKARVTDQSSLRSSPCVNLTVRPTPARVEAPAVVEFRPSPREVIRAGWVVCQICGCRGRWVNPFPEVKHDF*
Ga0116223_1005907233300009839Peatlands SoilGPEGRLDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPTPARVEAPAVVEFRPSPREVIRAGWVVCQICGCRGRWVNPFPEVKHDF*
Ga0116223_1021826313300009839Peatlands SoilRLDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPALVEAPAVVEFRPSSREAIRPGWVVCQICGRRGRWVNPFPEVKHDFR*
Ga0136449_10073036833300010379Peatlands SoilEYRQRLKARVTDQSSLRSSPCVNLTVRPAPALVEAPAVVEFRPSSREAIRPGWVVCQICGRRGRWVNPFPEVKHDFR*
Ga0136449_10143381723300010379Peatlands SoilYRQRLKARVTDQSSLGASPCVNLTAPPVPQTAAAPVAADFSPGSEAEYAASGVVCQLCGRRGRWVNPFPEVEHDSC*
Ga0136449_10366745513300010379Peatlands SoilQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPARVEAPAVVEFRPSSREAIRPGWVVCQICGRRGRWVNPFPEVKHDF*
Ga0137381_1012619113300012207Vadose Zone SoilDPDGRADHRDRQREYRRRLKARVTDKSSLRASPCVNLSASPAREPVETTPALDDLPSLGPECASGWVVCQICGRRGRWVNPFLEVKHDFQ*
Ga0137376_1137408413300012208Vadose Zone SoilLKARVTDKSSPRASSCVNLSAPPAREPVETTPALDDLPSLGPECASGWVVCQICGRRGRWVNPFLEVKHDFQ*
Ga0137385_1058689013300012359Vadose Zone SoilRLKARVTDKSSLRASPCVNLSASPAREPVETTPALDDLPSLGPECASGWVVCQICGRRGRWVNPFLEVKHDFQ*
Ga0181533_104148933300014152BogRLDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPARVEAPAVVEFRPSSREAIRPGWVVCQICGRRGRWINPFPR*
Ga0181533_109201113300014152BogRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPTPALVETPAGVEFRPSSKEAIRAGWVVCQICGRRGRWVNPFPR*
Ga0181524_1025663423300014155BogQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPALVEAPAVVEFRPSSREAIRAGWVVCQICGRRGRWVNPFPEVKHDF*
Ga0181518_1004060213300014156BogQRLKARVTDQSSLRSSPCVNLTVRPAPARVEAPAVVEFRPSSREAIRAGWVVCQICGRRGRWINPFPR*
Ga0181518_1023535923300014156BogMGPEGRLDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPTPALVETPAGVEFRPSSKEAIRAGWVVCQICGRRGRWVNPFPR*
Ga0181521_1009081133300014158BogGPEGRLDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPARVEAPAVVEFRPSSREAIRPGWVVCQICGRRGRWVNPFPEVKHDF*
Ga0181521_1035135713300014158BogGLEGRLDHRQRQREYRQRLKARVTDQSSLRASPCVNLTAPPAPEPAEAPPAEVFPTGSDAEYAASWVICQICGRRGRWINPFPEVKYDCR*
Ga0181521_1056066213300014158BogRLKARVTDQSSLRSSPCVNLTVRPAPALVEAPAVVEFRPSSREAIRAGRVVCQICGRRGRWVNPFPEVKHDF*
Ga0181521_1059817613300014158BogRRYEQSRGPEGRLDHRERQREYRQRLKARVTDQCSLRGSPCVNLTAPPVPQPSAAPVAADFSPGSEAEYTTSGVVCQICGRRGRWINPFPEVKHDFR*
Ga0181530_1018948313300014159BogQSLGLEGRLDHRQRQREYRQRLKARVTDQSSLRASPCVNLTAPPAPQLVESPPAADFSRGPDAEYAASWVVCQICGRRGRWVNPFPEVNHDYR*
Ga0181517_1032673013300014160BogRQRARVTDQSSLGTSPYVNLTAPPIPPPAEAPVAADFSPGSEAEYTASGIVCQICGRRGRWVNPFPEVEHGY*
Ga0182017_1006360633300014494FenRQRLKGRVTDQSSLRASPYVNLTAPPAPEPVEAPPAAVFSPGSDAEYAASWVICQICGRRGRWINPFPEVKYDCR*
Ga0181515_110981113300016730PeatlandLRSSPCVNLTVRPAPARVEAPAVVEFRPSSREAIRPGWVVCQICGRRGRWINPFPR
Ga0181515_120987813300016730PeatlandRSSPCVNLTVRPAPARVEAPAVVEFRPSSREAIRAGWVVCQICGRRGRWINPFPR
Ga0187856_102524513300017925PeatlandGLEGRLDHRQRQREYRQRLKARVTDQSSLRASPCVNLTAPPTPEPAEAPPASDFFPGSDAEYAARWVVCQICGRRGRWVNPFPEVKHDCR
Ga0187877_104730313300017931PeatlandGLEGRLDHRQRQREYRQRLKARVTDQSSLRASPCVNLTAPPAPEPAEAPPAAVFSPGSDAEYAASWVICQICGRRGRWINPFPEVKYDCR
Ga0187848_1014788223300017935PeatlandQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPALVDAPAVVEYRPSSREAIRAGWVVCQICGRRGRWVNPFPEVKHDF
Ga0187848_1026989413300017935PeatlandLDHRQRQREYRQRLKARVTDQSSLRASPCVNLTAPPAPQLVESPPAADFSRGPDAEYAASWVVCQICGRRGRWVNPFPEVNHDYR
Ga0187848_1032013023300017935PeatlandRLDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPALVEAPAVVEFRPSSREAIRAGRVVCQICGRRGRWVNPFPEVKHDF
Ga0187847_1089205313300017948PeatlandRQREYRQRLKARVTDQSSLGASPYVNLTAPPIPQPAEAPVAADFSPGSEAESTASGVVCQICGRRGRGINPFHEVRYDCR
Ga0187778_1126247513300017961Tropical PeatlandEGRLDHRQRQREYRQRLKARVTDQSSLRTSPCVNLRLPPAPKPAEVTPVPDLGSSTDRETFPGWVVCQICGRRGRWVNPFPEVQHDPR
Ga0187783_1049511523300017970Tropical PeatlandSLSTSPYVNLTVLPAPEATEAPLAVKFRPSSRAAIRAGWVVCQICGRRGRWVNPFPEVQHDPR
Ga0187781_1041861823300017972Tropical PeatlandARVTDQSSLSTSPYVNLTVLPAPEATEAPLAVKFRSSSRAAIRAGWVVCQICGCRGRWVNPFPEVQHDPR
Ga0187781_1042048623300017972Tropical PeatlandRVTDQSSLSTSPYVNLTVLPAPEATEAPLAVKFRPSSRAAIRAGWVVCQICGRRGRWVNPFPEVEHDPR
Ga0187891_102811733300017996PeatlandGPEGRLDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPARVEAPAVVEFRPSSREAIRPGWVVCQICGRRGRWVNPFPEVKHDF
Ga0187891_103033833300017996PeatlandEYRQRLKARVTDQSSLRSSPCVNLTVRPAPALVDAPAVVEYRPSSREAIRAGWVVCQICGRRGRWVNPFPEVKHDF
Ga0187891_121640423300017996PeatlandRLDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPALVEAPAVVEFRPSSREAIRAGWVVCQICGRRGRWVNPFPEVKHDF
Ga0187868_115840713300018002PeatlandQRQREYRQRLKARVTDQSSLRASPCVNLTAPPAPEPVESPPAADFSRGPDAEYAASWVVCQLCGRRGRWVNPFPEVNHDYR
Ga0187868_128990913300018002PeatlandRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPALVEAPAVVEFRPSSREAIRAGRVVCQICGRRGRWVNPFPEVKHDF
Ga0187876_108695513300018003PeatlandRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPARVEAPAVVEFRPSSREAIRPGWVVCQICGRRGRWINPFPR
Ga0187876_116750823300018003PeatlandDHRQRQREYRQRLKARVTDQSSLRASPYVNLTAPPIPQPAEAPVAADFSPGSEAEYTASGVVCQICGRRGRWVNPFPEVNHDYR
Ga0187878_126701623300018005PeatlandHRQRQREYRQRLKARVTDQSSLRASPCVNLTAPPAPEPAEAPPAAVFSPGSDAEYAASWVICQICGRRGRWINPFPEVKYDCR
Ga0187805_1002892513300018007Freshwater SedimentQREYRQRLKARVTDQSSLQTSLCVNLRVPPAPEPVEATPAPDLGSSPDRATSPGWVVCQVCGRRGRWVNPFPEVQHDSR
Ga0187888_117189723300018008PeatlandRLDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPALVDAPAVVEYRPSSREAIRAGWVVCQICGRRGRWVNPFPEVKHDF
Ga0187888_124222013300018008PeatlandLGLEGRLDHRQRQREYRQRLKARVTDQSSLRASPYVNLTAPPIPQPAEAPVAAVFPPGSEAEYTASGVVCQICGRRGRWVNPFPEVNHDYR
Ga0187888_136946323300018008PeatlandRLDHRQRQREYRQRLKARVTDQSSLRASPYVNLTAPPIPQPAEAPVAADFSPGSEAEYTASGVVCQICGRRGRWVNPFPEVKHDCR
Ga0187884_1003754413300018009PeatlandGPEGRLDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPARVEAPAVVEFRPSSREAIRPGWVVCQICGRRGRWINPFPR
Ga0187884_1020131213300018009PeatlandVNLTVRPAPVPVNTLPAVDPRPSPHAKIRGGWVVCQICGRRGRWVNPFPR
Ga0187873_127068323300018013PeatlandLDHRDRQRAYRRRLQARVTDQSSLRTSPCVNLTVLPAPEQVESPPAADLRPSSGAEIPPGWVVCQICGRRGRWINPFPEVKHDFR
Ga0187880_143711213300018016PeatlandQRLKARVTDQSSLRSSPCVNLTVRPAPARVEAPAVVEFRPSSREAIRPGWVVCQICGRRGRWVNPFPEVKHDF
Ga0187872_1022752323300018017PeatlandLGLEGRLDHRQRQREYRQRLKARVTDQSSLRASPYVNLTAPPIPQPAEAPVAAVFPPGSEAEYTASGVVCQICGRRGRWVNPFPEVKHDFR
Ga0187872_1038450223300018017PeatlandEYRQRLKARVTDQSSLRSSPCVNLTVRPAPALVEAPAVVEFRPSSREAIRAGRVVCQICGRRGRWVNPFPEVKHDF
Ga0187874_1013709623300018019PeatlandQRQREYRQRLKARVTDQSSLRASPCVNLTAPPAPQLVESPPAADFSRGPDAEYAASWVVCQICGRRGRWVNPFPEVNHDYR
Ga0187874_1022049823300018019PeatlandPERRLDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPARVEAPAVVEFRPSSREAIRPGWVVCQICGRRGRWINPFPR
Ga0187861_1009738823300018020PeatlandRRLQRREANRRYQQSLGLEGRLDHRQRLKVRVTDQSSLRPSPCVNLTVPPVRGPIAAAPAPNLRPSPGAEIPTGWVVCQICGRRGRWINPFPEVKHDFR
Ga0187861_1037696413300018020PeatlandARVTDQSSLRSSPCVNLTVRPAPARVEAPAVVEFRPSSREAIRPGWVVCQICGRRGRWINPFPR
Ga0187864_1003509813300018022PeatlandGLEGRLDHRQRQREYRQRLKARVTDQSSLRASPCVNLTAPPTPEPAEAPPASDFFPGSDAEYAARWVVCQICGRRGRWVNPFPELKHDCR
Ga0187864_1003918743300018022PeatlandDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPALVEAPAVVEFRPSSREAIRAGRVVCQICGRRGRWVNPFPEVKHDF
Ga0187864_1035128413300018022PeatlandDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPALVDAPAVVEYRPSSREAIRAGWVVCQICGRRGRWVNPFPEVKHDF
Ga0187864_1044815713300018022PeatlandREYRQRLKARVTDQSSLRASPCVNLTAPPAPEPVESPPAADFSRGPDAEYAASWVVCQICGRRGRWVNPFPEVNHDYR
Ga0187869_1026378013300018030PeatlandHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPARVEAPAVVEFRPSSREAIRPGWVVCQICGRRGRWINPFPR
Ga0187867_1016891513300018033PeatlandQSLGPEGRLDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPARVEAPAVVEFRPSSREAIRPGWVVCQICGRRGRWINPFPR
Ga0187863_1025409413300018034PeatlandGLEGRRDHRQRQREYRQRLKARVTDQSSLGASPYVNLTAPPIPQPAEAPVAADFSPGSEAESTASGVVCQICGRRGRGINPFHEVRYDCR
Ga0187862_1066900413300018040PeatlandHRQRQREYRQRLKARVTDQSSLRASPYVNLTAPPIPQPAEAPVAADFSPGSEAEYTASGVVCQICGRRGRWVNPFPEVNHDYR
Ga0187784_1069687623300018062Tropical PeatlandEANRRYEQSLGDEGRLDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPTPARVEAPAVVEFRPSSREAIRAGWVVCQICGRRGRWINPFPR
Ga0187784_1072555213300018062Tropical PeatlandRLDHRQRQREYRQRLKARVTDQSSLPSSPCVNLTVRPTPARVEAPAVVEFRPSSREAIRAGWVVCQICSRRGRWINPFPR
Ga0187784_1128443213300018062Tropical PeatlandRQRARVTDQSSLSTSPYVNLTVLPAPEATEAPLAVKFRPSSRAAIRAGWVVCQICGRRGRWVNPFPEVEHDPR
Ga0187784_1169024323300018062Tropical PeatlandRREANRRYAQSLGDEGRLDHRQRQREYRQRLKARVTDQSSPPSSPCVNLSVRPTPARVEAPAVVEFRPSSREAIRAGWVVCQICGRRGRWINPFPR
Ga0187772_1046420133300018085Tropical PeatlandLKARVTDKSSLPASPYVNLTAPTASEFDQALPALGLRPSPGDEILIGWVVCQICGRRGRWINPFPEVKHDF
Ga0187769_1065019923300018086Tropical PeatlandQRLKARVTDKSSLPASPYVNLTPPVASEFDQDPTLLGLRPSPGAKIPAGWVVCQICGRRGRWINPFPEVQHDFR
Ga0187769_1067512123300018086Tropical PeatlandEGRLDHRQRQREYRQRLKARVTDQSSVRAFPCVNLMAPPAPELVEATPAPDLGSSPDGETFPSWVVCQICGRRGRWVNPFPEVQYDSR
Ga0187770_1036088133300018090Tropical PeatlandLDHCQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPARVEAPAVVEFRPSSREAIPAGWVVCQICGRRGRWVNPFPEVKHDFR
Ga0208036_100518563300025419PeatlandLGLEGRLDHRQRQREYRQRLKARVTDQSSLRASPCVNLTAPPTPEPAEAPPASDFFPGSDAEYAARWVVCQICGRRGRWVNPFPEVKHDCR
Ga0208036_100676943300025419PeatlandLGLEGRLDHRQRQREYRQRLKARVTDQSSLRASPCVNLTAPPAPEPAEAPPAAVFSPGSDAEYAASWVICQICGRRGRWINPFPEVKYDCR
Ga0208189_107197323300025444PeatlandRQREYRQRLKARVTDQSSLRASPCVNLTAPPAPEPAEAPPAAVFSPGSDAEYAASWVICQICGRRGRWINPFPEVKYDCR
Ga0208037_100825713300025448PeatlandLEGRLDHRQRQREYRQRLKARVTDQSSLRASPCVNLTAPPAPEPAEAPPAAVFSPGSDAEYAASWVICQICGRRGRWINPFPEVKYDCR
Ga0208686_100860743300025500PeatlandDHRQRQREYRQRLKARVTDQSSLRASPCVNLTAPPTPEPAEAPPASDFFPGSDAEYAARWVVCQICGRRGRWVNPFPEVKHDCR
Ga0208686_103447113300025500PeatlandREGRLDHRQRQREYRQRLKARVTDQSSLQTSPCVNLRVPPAPEPAEATPAPDLGSSPHGETSPGWVVCQICGRRGRWVNPFSEVQHDSR
Ga0247845_102099623300026451SoilLDHRQRQREYRQRLKGRVTDQSSLRASPYVNLTAPPAPEPVEAPPAAVFSPGSDAEYAASWVICQICGRRGRWINPFPEVKYDCR
Ga0209517_1005553743300027854Peatlands SoilLGPEGRLDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPARVEAPAVVEFRPSSREAIRPGWVVCQICGRRGRWVNPFPEVKHDF
Ga0209517_1008940013300027854Peatlands SoilLGPEGRLDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPTPARVEAPAVVEFRPSPREVIRAGWVVCQICGCRGRWVNPFPEVKHDF
Ga0209590_1002890633300027882Vadose Zone SoilQREYRRRLKARVTDKSSLRASPCVNLSAPPAREPVETTPALDCLPSLGPECASGWVVCQICGRRGRWVNPFLEVKHDFQ
Ga0209415_1103316123300027905Peatlands SoilQRLKARVTDQSSLRSSPCVNLTVRPTPARVEAPAVVEFRPSPREVIRAGWVVCQICGCRGRWVNPFPEVKHDF
Ga0302208_1007142223300028774FenLDHRQRQREYRQRLKARVTDQSSLRASPYVNLTAPPIPQPAEAPVAADLSPGSETECTASGIVCQICGRRGRWVNPFPEVEHDY
Ga0311330_1134495223300029945BogYQQSLGLDGSLDHRQRQREYRQRLKARVTDQSSLRASPCVNLTAPPASEPAEAPPPAVFSPGLEAEYPASGVVCQICGRRGRWVNPFPEVQHDS
Ga0316363_1006453813300030659Peatlands SoilLGPEGRLDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPALVEAPAVVEFRPSSREAIRPGWVVCQICGRRGRWVNPFPEVKHDFR
Ga0316363_1007298023300030659Peatlands SoilQSSLRSSPCVNLTVRPAPARVEAPAVVEFRPSSREAIRPGWVVCQICGRRGRWVNPFPEVKHDF
Ga0310039_1016448823300030706Peatlands SoilQREYRQRLKARVTDQSSLRSSPCVNLTVRPTPARVEAPAVVEFRPSPREVIRAGWVVCQICGCRGRWVNPFPEVKHDF
Ga0310038_1044582423300030707Peatlands SoilEQSLGPEGRLDHRQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPALVEAPAVVEFRPSSREAIRPGWVVCQICGRRGRWVNPFPEVKHDFR
Ga0302325_1316251013300031234PalsaNRRYHQSLGMEGRLDHRQRQREYRQRLKGRVTDQSSLRASPYVNLTASLIPQPAEAPVATDFSPGSEAAYTASGVICQICGRRGRWINPFPR
Ga0265320_1004324733300031240RhizosphereDGRLDHRQRQREYRQRLKARVTDQSSLGASPYVNLTAPPIAPPAEAPGATDFSPGSEAEYTASGVVCQICGRRGRWINPFPEVKHDYR
Ga0318545_1003121513300032042SoilRKRQRAHVTDKSSLRVSVYVNLTVPPACEPIEATPASDLRPSAGAAVRAGWVVCQICGRRGRWVNPFPEVKHDFR
Ga0318570_1016593633300032054SoilQREYRKRQRARVTDKSSLRVSVYVNLTVPPACEPIEATPASDLRPSAGAAVRAGWVVCQICGRRGRWVNPFPEVKHDFR
Ga0311301_1031392213300032160Peatlands SoilQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPARVEAPAVVEFRPSSREAIRPGWVVCQICGRRGRWVNPFPEVKHDF
Ga0311301_1179254823300032160Peatlands SoilRRLKGRVTDQSSLGASPYVNLTAPPIPQPAEAPVAADFSPGSEAEYPASGVVCQICRRRGRWVNPFPEVKHDCR
Ga0335070_1176914313300032829SoilYEQSLGLEGRLDHRQRQREYRQRLKARVTDQSSLPSSPCVNLTVRPTPARVEAPAVVEFRPSSREAIRAGWVVCQICGRRGRWINPFPR
Ga0326728_1054459423300033402Peat SoilSLGPEGRLDHRQRQREYRQRLKARVTDQSSLPSSPCVNLTVRPAPARVEAPARVEAPARVEFRPSSREAIRAGWVVCQICGRRGRWLNPFPEVKHDFR
Ga0326728_1090664423300033402Peat SoilRQRQREYRQRLKARVTDQSSLHASPYVNLTAPPVPPPSEAPGAADFSPRSEAEYTASGVVCQICGRRGRWVNPFPEVEHDY
Ga0326726_1016018913300033433Peat SoilEANRRYQQSLGLEGRLDHRQRQREYRQRLKARVTDQSSLRTSPCVNLTAPPVRPASEAPVAADFSPGSEAEYAASGVVCQICGRWGRWVNPFPEVKHDRR
Ga0371489_0038058_2686_28743300033755Peat SoilMTDQSSLRSSPCVNLTVGPAPARVEAPAVVEFRPSSREAIRAGWVVCQICGRRGRWINPFPR
Ga0314861_0034690_535_7233300033977PeatlandMTDQSSLRSSPCVNLTVRPTPARVEAPAVVEFRPSSREAIRAGWVVCQICGRRGRWINPFPR
Ga0314861_0083340_363_5513300033977PeatlandMTDQSSLRSSPCVNLTVRPAPARVEAPAVVEFRPSSREAIPAGWVVCQICGRRGRWVNPFPR
Ga0314861_0118614_518_7243300033977PeatlandMTDQSSLRSSPCVNLTVRPAPARVEAPAVVEFRPSSREAIPAGWVVCQICGRRGRWVNPFPEVKHDFR
Ga0314861_0135857_2_2593300033977PeatlandLGDEGRLDHRQRQREYRQRLKARVTDQSSLPSSPCVNLTVRPTPARVEAPAVVEFRPSSREAIRAGWVVCQICSRRGRWINPFPR
Ga0314861_0273615_3_2783300033977PeatlandLGLEGRLDHCQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPAPARVEAPAVVEFQPSSREAIPAGWVVCQICGRRGRWVNPFPEVKHDFR
Ga0314861_0307362_351_5393300033977PeatlandMTDQSSLPSSPCVNLTVRPAPARVEFRPSSREAIRAGWVVCQICGRRGRWVNPFPDVKHDFR
Ga0314861_0328963_423_6803300033977PeatlandLGLEGRLDHCQRQREYRQRLKARVTDQSSLRSSPCVNLTVRPVPARVEAPAVVEFRPSSREAILAGWVVCQICGRRGRWVNPFPR
Ga0371487_0251185_2_2473300033982Peat SoilQRQREYRQRLKARVTDQSSLGASPYVNLTAPPIPPPAEAPVAADFSPGSEAEYTASGVVCQICGRRGRWVNPFPEVKHDFR
Ga0371488_0040176_388_5943300033983Peat SoilMTDQSSLRSSPCVNLTVRPAPARVEAPAVAEFRPSSREAIRAGWVVCQICGRRGRWVNPFSEVKHDFR

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.