Metagenome / Metatranscriptome Family F064345

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Overview

Basic Information
Family ID	F064345
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	60 residues
Representative Sequence	MKLGAKRGELVQLMQKFVPRSDVGIFRNERTKSTPLDPKLMIRSVSLSLGAFGIVL
Number of Associated Samples	91
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	16.67 %
% of genes near scaffold ends (potentially truncated)	92.97 %
% of genes from short scaffolds (< 2000 bps)	98.44 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (98.438 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere (42.188 % of family members)
Environment Ontology (ENVO)	Unclassified (75.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (70.312 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.71% β-sheet: 0.00% Coil/Unstructured: 64.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.44 %
All Organisms	root	All Organisms	1.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.44 %
Viruses	superkingdom	All Organisms → Viruses	0.78 %
cellular organisms	root	All Organisms → cellular organisms	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.44 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.44 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.44 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.44 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.44 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004114\|Ga0062593_102951679	Not Available	544	Open in IMG/M
3300005330\|Ga0070690_101405624	Not Available	561	Open in IMG/M
3300005331\|Ga0070670_100482857	Not Available	1100	Open in IMG/M
3300005335\|Ga0070666_10217934	All Organisms → Viruses → Predicted Viral	1345	Open in IMG/M
3300005347\|Ga0070668_101804092	Not Available	563	Open in IMG/M
3300005347\|Ga0070668_101870707	Not Available	552	Open in IMG/M
3300005367\|Ga0070667_101932857	Not Available	555	Open in IMG/M
3300005367\|Ga0070667_102075229	Not Available	535	Open in IMG/M
3300005441\|Ga0070700_100326876	Not Available	1129	Open in IMG/M
3300005445\|Ga0070708_101817225	Not Available	565	Open in IMG/M
3300005445\|Ga0070708_102254934	Not Available	502	Open in IMG/M
3300005467\|Ga0070706_100438049	Not Available	1216	Open in IMG/M
3300005544\|Ga0070686_100447260	Not Available	992	Open in IMG/M
3300005617\|Ga0068859_100924229	Not Available	956	Open in IMG/M
3300005719\|Ga0068861_100905567	Not Available	836	Open in IMG/M
3300005841\|Ga0068863_100828416	Not Available	923	Open in IMG/M
3300005841\|Ga0068863_101581681	Not Available	664	Open in IMG/M
3300005841\|Ga0068863_101844321	Not Available	614	Open in IMG/M
3300005842\|Ga0068858_100808783	Not Available	914	Open in IMG/M
3300005843\|Ga0068860_100641627	Not Available	1069	Open in IMG/M
3300005843\|Ga0068860_102399276	Not Available	547	Open in IMG/M
3300005843\|Ga0068860_102425155	Not Available	544	Open in IMG/M
3300005843\|Ga0068860_102656322	Not Available	519	Open in IMG/M
3300009101\|Ga0105247_10640232	Not Available	793	Open in IMG/M
3300009973\|Ga0105136_111352	Not Available	549	Open in IMG/M
3300009975\|Ga0105129_105390	Not Available	747	Open in IMG/M
3300009975\|Ga0105129_113466	Not Available	584	Open in IMG/M
3300009976\|Ga0105128_116906	Not Available	551	Open in IMG/M
3300009980\|Ga0105135_130581	Not Available	506	Open in IMG/M
3300009981\|Ga0105133_125173	Not Available	546	Open in IMG/M
3300009981\|Ga0105133_125381	Not Available	544	Open in IMG/M
3300009990\|Ga0105132_100434	Not Available	1804	Open in IMG/M
3300009990\|Ga0105132_101232	Not Available	1347	Open in IMG/M
3300009990\|Ga0105132_119400	Not Available	659	Open in IMG/M
3300009990\|Ga0105132_128023	Not Available	592	Open in IMG/M
3300009992\|Ga0105120_1004186	Not Available	1199	Open in IMG/M
3300009992\|Ga0105120_1036111	Not Available	599	Open in IMG/M
3300010265\|Ga0134098_1072012	Not Available	529	Open in IMG/M
3300010267\|Ga0134101_1071646	Not Available	592	Open in IMG/M
3300010371\|Ga0134125_12896346	Not Available	521	Open in IMG/M
3300010396\|Ga0134126_12201206	Not Available	601	Open in IMG/M
3300014968\|Ga0157379_11242632	Not Available	718	Open in IMG/M
3300015270\|Ga0182183_1073601	Not Available	547	Open in IMG/M
3300015270\|Ga0182183_1081458	Not Available	529	Open in IMG/M
3300015273\|Ga0182102_1009449	Not Available	761	Open in IMG/M
3300015273\|Ga0182102_1041347	Not Available	522	Open in IMG/M
3300015280\|Ga0182100_1046352	Not Available	655	Open in IMG/M
3300015290\|Ga0182105_1103120	Not Available	511	Open in IMG/M
3300015293\|Ga0182103_1102472	Not Available	503	Open in IMG/M
3300015297\|Ga0182104_1068660	Not Available	617	Open in IMG/M
3300015301\|Ga0182184_1047533	Not Available	651	Open in IMG/M
3300015309\|Ga0182098_1078249	Not Available	600	Open in IMG/M
3300015309\|Ga0182098_1100041	Not Available	550	Open in IMG/M
3300015309\|Ga0182098_1120241	Not Available	514	Open in IMG/M
3300015310\|Ga0182162_1060363	Not Available	667	Open in IMG/M
3300015311\|Ga0182182_1120529	Not Available	505	Open in IMG/M
3300015312\|Ga0182168_1121014	Not Available	529	Open in IMG/M
3300015312\|Ga0182168_1128030	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	517	Open in IMG/M
3300015315\|Ga0182120_1129569	Not Available	517	Open in IMG/M
3300015316\|Ga0182121_1093563	Not Available	604	Open in IMG/M
3300015319\|Ga0182130_1002045	Not Available	1763	Open in IMG/M
3300015319\|Ga0182130_1029315	Not Available	855	Open in IMG/M
3300015319\|Ga0182130_1082630	Not Available	608	Open in IMG/M
3300015320\|Ga0182165_1054602	Not Available	735	Open in IMG/M
3300015324\|Ga0182134_1013858	Not Available	1130	Open in IMG/M
3300015324\|Ga0182134_1023045	Not Available	971	Open in IMG/M
3300015325\|Ga0182148_1070869	Not Available	661	Open in IMG/M
3300015325\|Ga0182148_1095014	Not Available	594	Open in IMG/M
3300015327\|Ga0182114_1097243	Not Available	621	Open in IMG/M
3300015327\|Ga0182114_1143172	Not Available	530	Open in IMG/M
3300015328\|Ga0182153_1134552	Not Available	530	Open in IMG/M
3300015329\|Ga0182135_1110102	Not Available	577	Open in IMG/M
3300015330\|Ga0182152_1067761	Not Available	694	Open in IMG/M
3300015331\|Ga0182131_1149499	Not Available	512	Open in IMG/M
3300015332\|Ga0182117_1102263	Not Available	625	Open in IMG/M
3300015336\|Ga0182150_1110952	Not Available	594	Open in IMG/M
3300015340\|Ga0182133_1133828	Not Available	589	Open in IMG/M
3300015348\|Ga0182115_1271753	Not Available	537	Open in IMG/M
3300015348\|Ga0182115_1275885	Not Available	532	Open in IMG/M
3300015353\|Ga0182179_1097597	Not Available	875	Open in IMG/M
3300015354\|Ga0182167_1219062	Not Available	693	Open in IMG/M
3300017408\|Ga0182197_1106489	Not Available	576	Open in IMG/M
3300017412\|Ga0182199_1176905	Not Available	533	Open in IMG/M
3300017414\|Ga0182195_1178864	Not Available	550	Open in IMG/M
3300017414\|Ga0182195_1213930	Not Available	510	Open in IMG/M
3300017422\|Ga0182201_1036304	Not Available	799	Open in IMG/M
3300017422\|Ga0182201_1062842	Not Available	670	Open in IMG/M
3300017439\|Ga0182200_1073080	Not Available	668	Open in IMG/M
3300017445\|Ga0182198_1075144	Not Available	734	Open in IMG/M
3300017445\|Ga0182198_1171460	Not Available	538	Open in IMG/M
3300017445\|Ga0182198_1180970	Not Available	526	Open in IMG/M
3300020033\|Ga0182146_105069	Not Available	551	Open in IMG/M
3300025885\|Ga0207653_10060087	Not Available	1280	Open in IMG/M
3300025910\|Ga0207684_11433536	Not Available	564	Open in IMG/M
3300025936\|Ga0207670_11181998	Not Available	647	Open in IMG/M
3300025986\|Ga0207658_10257560	Not Available	1485	Open in IMG/M
3300026088\|Ga0207641_10200773	Not Available	1838	Open in IMG/M
3300028049\|Ga0268322_1001805	Not Available	1353	Open in IMG/M
3300028050\|Ga0268328_1041111	Not Available	617	Open in IMG/M
3300028052\|Ga0268300_1004710	Not Available	793	Open in IMG/M
3300028053\|Ga0268346_1023931	Not Available	614	Open in IMG/M
3300028058\|Ga0268332_1024607	Not Available	759	Open in IMG/M
3300028058\|Ga0268332_1040950	Not Available	641	Open in IMG/M
3300028064\|Ga0268340_1028987	Not Available	741	Open in IMG/M
3300028064\|Ga0268340_1034470	Not Available	700	Open in IMG/M
3300028140\|Ga0268334_1013294	Not Available	570	Open in IMG/M
3300028143\|Ga0268348_1015822	Not Available	588	Open in IMG/M
3300028143\|Ga0268348_1025727	Not Available	506	Open in IMG/M
3300028151\|Ga0268308_1025880	Not Available	549	Open in IMG/M
3300028155\|Ga0268349_1044812	Not Available	562	Open in IMG/M
3300028248\|Ga0268312_1006165	Not Available	870	Open in IMG/M
3300028253\|Ga0268316_1015838	Not Available	579	Open in IMG/M
3300028262\|Ga0268310_1000933	Not Available	1758	Open in IMG/M
3300028262\|Ga0268310_1007038	Not Available	953	Open in IMG/M
3300028466\|Ga0268321_110106	Not Available	525	Open in IMG/M
3300028469\|Ga0268337_1008806	Not Available	639	Open in IMG/M
3300028469\|Ga0268337_1014070	Not Available	558	Open in IMG/M
3300028471\|Ga0268323_1020995	Not Available	511	Open in IMG/M
3300028472\|Ga0268315_1024422	Not Available	524	Open in IMG/M
3300028475\|Ga0268327_1022189	Not Available	538	Open in IMG/M
3300028525\|Ga0268305_104330	Not Available	693	Open in IMG/M
3300028529\|Ga0268311_1003689	Not Available	943	Open in IMG/M
3300028529\|Ga0268311_1021729	Not Available	557	Open in IMG/M
3300032502\|Ga0214490_1137281	Not Available	554	Open in IMG/M
3300032689\|Ga0214497_1134082	Not Available	518	Open in IMG/M
3300033542\|Ga0314769_1338832	Not Available	505	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	88.28%
Environmental	Environmental	10.16%
Engineered	Engineered	1.56%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	88.28%
Terrestrial	Environmental → Terrestrial	10.16%
Bioreactor	Engineered → Bioreactor	1.56%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	62.50%
Soil	Environmental → Terrestrial → Soil	10.16%
Unclassified	Host-Associated → Plants → Unclassified	10.16%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.03%
Unclassified	Engineered → Bioreactor → Unclassified	1.56%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	62.50%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified	10.16%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.59%
Loam	Environmental → Terrestrial → Soil → Loam	7.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.47%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	2.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.56%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	1.56%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	62.50%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified → Unclassified	10.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.47%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.56%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	1.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%

Habitat	Taxonomy	Distribution
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	42.19%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	20.31%
Switchgrass Associated	Host-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated	10.16%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	8.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.47%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.34%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.56%
Switchgrass Degrading	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Switchgrass Degrading	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009973	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_222 metaG	Host-Associated	Open in IMG/M
3300009975	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_187 metaG	Host-Associated	Open in IMG/M
3300009976	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_186 metaG	Host-Associated	Open in IMG/M
3300009980	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_219 metaG	Host-Associated	Open in IMG/M
3300009981	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_208 metaG	Host-Associated	Open in IMG/M
3300009990	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_206 metaG	Host-Associated	Open in IMG/M
3300009992	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_108 metaG	Host-Associated	Open in IMG/M
3300010265	Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 9_31_10_142_A3 metaG	Engineered	Open in IMG/M
3300010267	Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 12_48_3.3_201_A2 metaG	Engineered	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015270	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015273	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015280	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015290	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015293	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015297	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015301	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015309	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015310	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015311	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015312	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015315	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015316	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015319	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015320	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015324	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015325	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015327	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015328	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015329	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015330	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015331	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015332	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015336	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015340	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015348	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015353	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015354	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017408	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017412	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017414	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017422	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017439	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017445	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300020033	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12JUL2016_LD2 MG	Host-Associated	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028049	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028050	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028052	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028053	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028058	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028064	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028140	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028143	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028151	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028155	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028248	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028253	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028262	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028466	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028469	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028471	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028472	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028475	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028525	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028529	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300032502	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032689	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_12JUL2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033542	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_18SEP2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062593_1029516791	3300004114	Soil	RNYMKLGAKRGELVQLMQKSVPRSDVGIFRNERTKSTPLDPKLMIRSVSLSLGAFGIVL*
Ga0070690_1014056241	3300005330	Switchgrass Rhizosphere	MKLGAKRGELVQLMQKFVPRSHIGIFRNEHTLSTLLDPKVMFQYVLYYLRAFGIVS*
Ga0070670_1004828573	3300005331	Switchgrass Rhizosphere	MKPDAKHTELVQLTQKFVTRSHIGIFRNKHNQSTPLDPILFFRCVLYYLGAFGIVS*
Ga0070666_102179343	3300005335	Switchgrass Rhizosphere	MKLGAKRGELVQLMQKFVPRSHIGIFHNKHTLSTLLDPKVMFQYVLYYLRAFGIVS*
Ga0070668_1018040922	3300005347	Switchgrass Rhizosphere	VHLGSFLKCLKLGAKRDELVQLMQKFVPRSHIGIFSNGRTLSTPLDPKVMFQYVLQYLGAFGIVS*
Ga0070668_1018707072	3300005347	Switchgrass Rhizosphere	FRNCMKLDAKQGELVQLMQKFVPRSHVGIFCNERTKSTPLDTKLMFWCIAWCLGAFGIIS
Ga0070667_1019328572	3300005367	Switchgrass Rhizosphere	MKLGAKRGELVQLMQKFVPRSHVGIFRNERTKSTALDPKLMIRFVLLYLGAFGIVL*
Ga0070667_1020752291	3300005367	Switchgrass Rhizosphere	AKRGELVQLMQKFVPRSHVGIFRNGHNQSTQLDPKVMFWYVSMYLGAFGIVS*
Ga0070700_1003268762	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MKLGAKRGELVQLMQKFVPRSDVGIFRNERTKSTPLDPKLMIRSVSLSLGAFGIVL*
Ga0070708_1018172251	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	NYMKLGAKRGELVQLMQKFVPRSDVGIFRNERTKSTPLDPKLMIQSVSLSLGAFGIVL*
Ga0070708_1022549342	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKLDAKQGELVQLMQKFVPRSHVGIFCNEHTQSTPLDPKLMFWCVAWCLGAFGIVSELHE
Ga0070706_1004380491	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	HLGSFRNYMKLGAKRGELVQLMQKFVPRSDVGIFRNERTKSTPLDPKLMIRSVSLSLGAFGIVL*
Ga0070706_1021156831	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	KLGAKRAELVQLMQKFVPRSRVGIFRNERTSNPKDPKLMFWRISQCSDAFGIVLLQQ
Ga0070686_1004472602	3300005544	Switchgrass Rhizosphere	MKLGAKRGELVQLMRKFVPRSHIEIFRNEHTLSTLLDPKVMFQYVLYFLRAFGIVS*
Ga0068859_1009242292	3300005617	Switchgrass Rhizosphere	WVHLGSFRNCMKLGAKRGELVQLMQKFVPRSHIGIFHNKHTLSTLLDPKVMFQYVLYYLRAFGIVS*
Ga0068861_1009055671	3300005719	Switchgrass Rhizosphere	CELVQLMQKFVPRSHVGIFRNERTEPTPLDPKLMFWCIAYSLGAFGIVS*
Ga0068863_1008284161	3300005841	Switchgrass Rhizosphere	MKLDAKQGELVQLMQKFVPRSHVGILCNERTQSTPLDPKLMFWCVAWCLGAFGIVSELHE
Ga0068863_1015816811	3300005841	Switchgrass Rhizosphere	CIKLDAKQGELVQLMQKFVPRSHVGIFRNERTQSTPLDPELMFWCIAYCLGAFGIDS*
Ga0068863_1018443212	3300005841	Switchgrass Rhizosphere	SFRNYMKLGAKRGELVQLMQKFVPRSDVGIFRNEGTKSIPLDPKLMIRSVSLSLGAFGIVL*
Ga0068858_1008087832	3300005842	Switchgrass Rhizosphere	NCIKLDAKQGELVQLMQKFVPRSHVGIFRNERTQSTPLDPELMFWCIAYCLGAFGIDS*
Ga0068860_1006416272	3300005843	Switchgrass Rhizosphere	MKLDAKQGELVQLMQKFVPRSHVGIFCNERTQSTPLDPKLMFWCVAWCLGAFGIVSELHETRFKT
Ga0068860_1023992761	3300005843	Switchgrass Rhizosphere	RNYMKLGAKRGELVQLMQKFVPRSDVGIFRNERTKSTPLDPKLMIRSVSLSLGAFGIVL*
Ga0068860_1024251551	3300005843	Switchgrass Rhizosphere	YMKLGAKRGELVQLMQKFVPRSDVGIFRNERTQSTPLDPKLMIRSVSLSLGAFGIVL*
Ga0068860_1026563221	3300005843	Switchgrass Rhizosphere	VHLGSFRNCMKLGAKRGELVQLMQKFVPRSHIGIFHNKHTLSTLLDPKVMFQYVLYYLRAFGIVS*
Ga0105247_106402321	3300009101	Switchgrass Rhizosphere	LDLCSILVHLGLFRNCMKLGAKRGELVQLMQKFVPRSDVGIFCNGQSQSTQLDPKVMFRYVSYYLGAFGIVS*
Ga0105136_1113521	3300009973	Switchgrass Associated	SILVHLGSFRNCMKLGAKRGEMVQLMQKFVPRSDIRIFRNERTKSTPLDPKLMIRSVLLSLGAFGIVL*
Ga0105129_1053901	3300009975	Switchgrass Associated	IQSTPLDLHSILVHLGSFRNYMKLGAKRGELVQLMQKFVPRSDVGIFHNERTQSTPLDPKLMFRSVS*
Ga0105129_1134661	3300009975	Switchgrass Associated	TPLDLHSILVHLGSFRNYMKLSAKRGELVQLVQKFVPRSDVGIFRNEGTKSTPLDPKLMIRSVSLSLGAFGIVL*
Ga0105128_1169061	3300009976	Switchgrass Associated	GLFPNCMKLDAKQGELVQLMQKFVPRSHAGIFHNERTQSTPFYPKLMFWCVALCLGAFGIVS*
Ga0105135_1305811	3300009980	Switchgrass Associated	WGELVQLMQKFVPQSDVGIFRNERTKSTPLDPKLMIRSVLLYLAAFGIVS*
Ga0105133_1251731	3300009981	Switchgrass Associated	LHSVWVHLGLFPNCMKLDAKQGELVQLMQKFVPRSHDGIFHNERTQSTPFYPKLMFWCVALCLGAFGIVS*
Ga0105133_1253811	3300009981	Switchgrass Associated	IKLDAKQGELVQLMQKFVPRSHVRIFLNERTESTPLDPELMFWCIAWCLGAFGIVS*
Ga0105132_1004341	3300009990	Switchgrass Associated	GELVQLMQKFVPRSDVGIFRNEHTQSTQLDPKLMFLAAFGIVS*
Ga0105132_1012321	3300009990	Switchgrass Associated	NCLKLGAKQGELVQLMQKLVPRSHVGILSNKCTESTPLEPKLMFWCVALCLAAFGIVS*
Ga0105132_1194001	3300009990	Switchgrass Associated	ELVQLMQKFVPRSHIGIFRNARTLSIPLDPKVMFQYVLQYLGAFGIVS*
Ga0105132_1280232	3300009990	Switchgrass Associated	GAKRGELVQLMQKFVPRIHIVIFRNERTSTPLDNKLIFWCIAKCLGAFGIIS
Ga0105120_10041863	3300009992	Switchgrass Associated	FGVFHCVWVHSGSFRNCMKLGAKHTELVQLMQKFVPQSDVGIFRNERTKSTPLDPKLMIRSVLLYLAAFGIVS*
Ga0105120_10361111	3300009992	Switchgrass Associated	AKQGELVQLMQKFVPQSHVGIFHNERTQSTPFYPKLMFWCVALCLGAFGIAS*
Ga0134098_10720121	3300010265	Switchgrass Degrading	MKLGAKHTELVQLMQKFVPQSHVRILHNERAQSTLLEPKLMFWCIAHCLGAFG
Ga0134101_10716461	3300010267	Switchgrass Degrading	LCSIFVHLGLFRNCMKLGAKRGELVQLMQKFRPRSDVGIFCNGQSQSTPLDPKLLIQSVSLSLGAFGIVL*
Ga0134125_128963461	3300010371	Terrestrial Soil	VHLGSFRNYMKLDAKQGELVQLMHKLVPRCHIEIFRNERTQSNPLDPKLTFWCVSYHWGAFGTAWLP*
Ga0134126_122012062	3300010396	Terrestrial Soil	MKLGAKRGELVQLMQKFVPRSDVGIFRNERTKSTLLDNKLMIRSVSLSLGAFGIVL*
Ga0157379_112426321	3300014968	Switchgrass Rhizosphere	AKHTELVQLMQKIVPQSHVGIFRNDRTLSTALDSKLMCRWVSLYLGGFGIVS*
Ga0182183_10736011	3300015270	Switchgrass Phyllosphere	MKLGAKRGALVQLMQKFVPRSDVGIFRNERTKSTPLDPKLMIRSVSLSL
Ga0182183_10814581	3300015270	Switchgrass Phyllosphere	NCIKLDAKQGELVQLMQKFVPRSHVGIFRNERTQSTPLDPELMFWCIAYCLGAFGIGS*
Ga0182102_10094491	3300015273	Switchgrass Phyllosphere	LGAKRGELVQLMQKFVPRSHIGIFHNKHTLSTLLDPKVMFQYVLYYLRAFGIVS*
Ga0182102_10413471	3300015273	Switchgrass Phyllosphere	MKLSAKRGELVQLMQKFVPRSDVGIFCNGQHQSTQLDPKVMVRYVSYYLGAFGIV
Ga0182100_10463521	3300015280	Switchgrass Phyllosphere	FRNCMKLDAKQGELVQLMQKFVPRSHVGIFCNERTQSTPLDPKLMFWCVAWCLGAFGIVSELHETRFKTV*
Ga0182105_11031201	3300015290	Switchgrass Phyllosphere	LKLGAKWGQLVQLMQKVVTRSHIGIFRNERTQSAPLDPRLMFWCVVKCLAAFGIVS*
Ga0182103_11024721	3300015293	Switchgrass Phyllosphere	MKLDAKLGELVQLMQKFVPRSHVVIFRNERTKSTPLDPKLMFWCVAWCLGAFG
Ga0182104_10686601	3300015297	Switchgrass Phyllosphere	LCSILVHLGSFRNCMKLGAKRGELVQLMQKFVPRSNVRIFRNECTKSTPLDPNLMIRSVLLYLGAFGIIS*
Ga0182184_10475331	3300015301	Switchgrass Phyllosphere	VWVHLGSFRNCMKLGAKRGELVQLMQKFVPRSHIGIFRNEHTLSTLLDPKVMFQYVLYYLRAFGIVS*
Ga0182098_10782491	3300015309	Switchgrass Phyllosphere	MKLDAKQGELVQLMQKFVPRSHVGIFCNERTQSTPLDPKLMFWCVAWCLGAFGIVSELHETRFKTV*
Ga0182098_11000411	3300015309	Switchgrass Phyllosphere	MKLGEKRGELVQLKQKFVPRSDVGIFRNERTKSTPLDPKLMIRSVSLSL
Ga0182098_11202411	3300015309	Switchgrass Phyllosphere	MKLGAKRGELVQLMQKFVPRSDVRIFRNECTKSTPLDDKLMIRSVLLYL
Ga0182162_10603631	3300015310	Switchgrass Phyllosphere	MKLGTKRGQLVQLMQKSVARSHIGIFCNDRTESTPLDPKLMFWCVAWCLAAFGIVS
Ga0182182_11205291	3300015311	Switchgrass Phyllosphere	ILVHLGLFRNCMKLGAKRGELVQLMQKFVPRSDIGIFCNERIKSTPLDPKLMIRSVLLSLGAFGIVL*
Ga0182168_11210141	3300015312	Switchgrass Phyllosphere	TLNSYFGVFQSVWVHLGSFRKCMELGAKRGELEQLMQKFVPQNHVGIFHNERTKSTPLDPKLMIWSVLLYLGAFGIVS*
Ga0182168_11280301	3300015312	Switchgrass Phyllosphere	SILVHLGPFRNCMKLSAKRGELVQLMKKFVPRSDVRIFYNEHTKSTPLNPKLMIRSVLLSLGAFGIIL*
Ga0182120_11295691	3300015315	Switchgrass Phyllosphere	KLGAKRGELVQLMQKFVPRSHIGIFHNKHTLSTLLDPKVMFQYVLYYLHAFGIVS*
Ga0182121_10935631	3300015316	Switchgrass Phyllosphere	MKLGAKRDELMQKFVPRSRVGIFRNECTRSTPSDPKLMFWCVSNYLGAFGTVW
Ga0182130_10020453	3300015319	Switchgrass Phyllosphere	RNRMKLGAKRGELVQLMQKFVPRSDIGIFRNEHTKSNPLDPKLMIRSILLYLVAFGIVS*
Ga0182130_10293151	3300015319	Switchgrass Phyllosphere	KLDAKQGELVQLMQKFVPRSHVGIFRNERTQSTPLDPELMFWCIAYCLGAFGIDS*
Ga0182130_10826301	3300015319	Switchgrass Phyllosphere	MKLGAKQTELVQLMQKFVPRSRVGIVHNASTQSIPLDPKLMFRWISQCLGAFGIVSLLH
Ga0182165_10546021	3300015320	Switchgrass Phyllosphere	MKLGAKRGELVQLMQKFVPRSDIGIFRNEHTKSNPLDPKLMIRSILLYLVAFGIVS*
Ga0182134_10138582	3300015324	Switchgrass Phyllosphere	SFRNCMKLGAKRGELVQLMQKFVPRSDIGIFRNEHTKSNPLDPKLMIRSILLYLVAFGIVS*
Ga0182134_10230451	3300015324	Switchgrass Phyllosphere	CTQSTPLDIRSILVHLGSFRNCMKLGAKRGELEQLMQKFVPQNHVGIFRNERTKPTPLDPKLMIRSVLLYFGAFGIIS*
Ga0182148_10708691	3300015325	Switchgrass Phyllosphere	KLGAKRGELVQLMQKFVPRSHIGIFHNKHTLSTLLDPKVMFQYVLYYLRAFGIVS*
Ga0182148_10950141	3300015325	Switchgrass Phyllosphere	LKCLKLGAKRDELVQLMQKFVPRSHIGIFSNGRTLSTPLDPKVMFQYVLQYLGAFGIVS*
Ga0182114_10972431	3300015327	Switchgrass Phyllosphere	FGVFHSVWVHLGSFRNCMKLGAKGGELVQLMQKFVPRSDVGIFHNERTKSAPLDPKLMIRSVLLYLGAFGMVS*
Ga0182114_11431721	3300015327	Switchgrass Phyllosphere	NCMKLDAKQGELVQLMQKFVPRSHVGIICNERTQSTPLDPKLMFWCVAWCLGAFGIVSELHETRFKTV*
Ga0182153_11345521	3300015328	Switchgrass Phyllosphere	FHNCIKLDAKQGELVQLMQKYVPQRRIVIFCNKRTQSTPLDPKLVFWFFAYCLGAFGMVS
Ga0182135_11101021	3300015329	Switchgrass Phyllosphere	NYMKLGAKRGELVQLMQKFVPRSDVGIFRNERTKFTPLDPKLMIRSVSLSLGAFGIIL*
Ga0182152_10677611	3300015330	Switchgrass Phyllosphere	GAKRDELVQLMQKFIPRSHIRIFRNGRTLSTPLDPKVMFQYVLYYLGAFGIVS*
Ga0182131_11494991	3300015331	Switchgrass Phyllosphere	SILVHLVSFRNYMKLGAKRDELVQLMQMSVPRSDVGIFRNKPTKSTPLDPKVMIRSVSLSLGAFGIVL*
Ga0182117_11022632	3300015332	Switchgrass Phyllosphere	KLGAKQGELVQLMQKLVPRSHVGILSNKCTESTPLEPKLMFWCVALCLAAFGIVS*
Ga0182150_11109521	3300015336	Switchgrass Phyllosphere	MKLGAKRGELVQLMQKFVPRSHIGIFRNEHTQSTLLDPKVMFQYVLYFLHAFGIVL*
Ga0182133_11338281	3300015340	Switchgrass Phyllosphere	PLDLHSILVHLGSFRNCMKLGAKRGELVQLMQKFVPRSDVRIFRHERTKSTPLDPKLMIRSVLLSLGAFGIVL*
Ga0182115_12717531	3300015348	Switchgrass Phyllosphere	SICNYIKLDAKQGELVQLMQKFVPRSHVGIFRSERTQSTPLDPKLMFWCIAYCLGAFGIDS*
Ga0182115_12758852	3300015348	Switchgrass Phyllosphere	VQLMQKFVPRSDVGIFRNERTKSTTLDPKLMIQSVSLSLGAFGIVL*
Ga0182179_10975971	3300015353	Switchgrass Phyllosphere	NRMKLDAKQGELVQLMRKLVPRSHAGIFLYERTKSTPLDPKLLFWCVALCLGAFGIVS*
Ga0182167_12022851	3300015354	Switchgrass Phyllosphere	MQKFVPRSHVGIFRNERAKSTPLDPKLKFCCVAWCLGAFGIV
Ga0182167_12190622	3300015354	Switchgrass Phyllosphere	VWVHLGSFRNCMKLGAKRGELVQLMQKFVPRSHIKIFRNEHTLSTLLDPKVMFQYVLYYLRAFVIVS*
Ga0182197_11064891	3300017408	Switchgrass Phyllosphere	MKLGAKHTELVQLMQKFVPRSDVRIFRNERTKSTPLDPKLMIRSVLLSLGAFGI
Ga0182199_11769051	3300017412	Switchgrass Phyllosphere	FRNCMKLGAKWDELVQLMQKFVPRSHIGIFRNGRTLSTPLDPKVMFLYVLSYLGAFGIVS
Ga0182195_11788642	3300017414	Switchgrass Phyllosphere	MKLGAKRCELVQLIQKFVPRSHVWIFRIERTKSTPLDPKLMFCCVAWCLGAFGI
Ga0182195_12139301	3300017414	Switchgrass Phyllosphere	KRGELVQLMQKFVPRSDVGIFRNERTKSTTLDPKLMIQSVSLSLGAFGIVL
Ga0182201_10363041	3300017422	Switchgrass Phyllosphere	FRNCMKLGAKRGELVQLMQKFVPRSHIGIFRNEHTLSTLLDPKVMFQYVLYYLRAFGIVS
Ga0182201_10628421	3300017422	Switchgrass Phyllosphere	QVELVQLMQKFVPRSHVGIFRNERTQSNQLDPELMFWCIAYYFGAFGIVS
Ga0182200_10730801	3300017439	Switchgrass Phyllosphere	ELVQLMQKFVPRSDVGIFHNERTKSAPLDPKLMGRSVLLYLGVFGMVS
Ga0182198_10751442	3300017445	Switchgrass Phyllosphere	ILVHLGSFRNCMKLGAKRGELVQLMQKFVPRSDVRIFRNECTKSTPLDAKLMIRSVLLYLGAFGIIS
Ga0182198_11714601	3300017445	Switchgrass Phyllosphere	LFRNCMKLGAKHCELVQLMQKFVPRSHVGIFRNERTEPTPLDPKLMFWCVAYSLGAFGIV
Ga0182198_11809701	3300017445	Switchgrass Phyllosphere	FHNCMKLDAKQGELVQLMQKFVPRSHVGIFHNEHTQSAPLDPKLMFWCVTKCWDVFGIIS
Ga0182146_1050691	3300020033	Switchgrass Phyllosphere	AKQGELVQLMQKFVPRSHVGIFRNERTQSTPLDPELMFWCIAYCLGAFGIDS
Ga0207653_100600871	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	DLHSILVHLGSFRNYMKLGAKRGELVQLMQKFVPRSDVGIFRNERTKSTPLDPKLMIRSVSLSLGAFGIVL
Ga0207684_114335361	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LCSILVHMGLFRNCMKLGAKRGELVQLMQKFVPRSDVGIFRNERTKSTPLDPKLMIRSVSLSLGAFGIVL
Ga0207670_111819981	3300025936	Switchgrass Rhizosphere	TTXNSVQNGGELVQLMQKFVPRSDVGIFRNERTKSTPLDPKLMIRSVSLSLGAFGIVL
Ga0207658_102575601	3300025986	Switchgrass Rhizosphere	ILVHLGLFRNYMKLGAKRGELVQLMQKFVPRSDVGIFRNERTKSTPLDPKLMIRSVSLSLGAFGIVL
Ga0207641_102007731	3300026088	Switchgrass Rhizosphere	ILVHLGSFRNYMKLGAKRGELVQLMQKFVPRSDIGIFRNEHTKSNPLDPKLMIRSILLYLVAFGIVS
Ga0268322_10018053	3300028049	Phyllosphere	PNYTQNSYFGVFQSVWVHLGSFRKCMELGAKRGELEQLMQKFVPQNHVGIFHNERTKSTPLDPKLMIWSVLLYLGAFGIVS
Ga0268328_10411111	3300028050	Phyllosphere	NTMKLDAKRGEQVQLMQKFMPXSHVRIFQNERTQSTTLDNKLMIRSVS
Ga0268300_10047101	3300028052	Phyllosphere	MKLVAKQGELVQLMQKFVPRSHVGIFCNERTQSTPLDPKLMFWCVAWCLGAFGIVSELHETRF
Ga0268346_10239311	3300028053	Phyllosphere	PLDLCSILEHLGSFRNCMKLGAKRGELVQLMQKFVPRSDLGILCNGHTQSTQLDPKVMFWYVL
Ga0268332_10246071	3300028058	Phyllosphere	GELVQLMQKCVPRSHVGIFRNERTQSTPLDPELMFWCIAYRLGAFGIDS
Ga0268332_10409501	3300028058	Phyllosphere	MKLGAKRGELVQLMQKFVPRSHIGIFRNEHTLSTLLDPKVMFQYVLYYLRAFGIVS
Ga0268340_10289872	3300028064	Phyllosphere	QKFVPRSDVKIFHNECTKSTPLDAKLMIRSVLLYLGAFGIIS
Ga0268340_10344701	3300028064	Phyllosphere	SVWVHLGSFRNCMKLGAKRGELVQLMQKFVPRSHIGIFRNEHTLSTLLDPKVMFQYVLYYLRAFGIVS
Ga0268334_10132941	3300028140	Phyllosphere	LDIHSILVHLGSFRNYMKLGAKRGALVQLMQKFVPRSDVGIFCNKRTKSTPLDPKLMIRSVSLSLGAFGIVL
Ga0268348_10158221	3300028143	Phyllosphere	MKLGAKRGELVQLVQKFVPRCDVGIFRNERTKCTPLDPKLMIQSVSLSLGAFGIVL
Ga0268348_10257271	3300028143	Phyllosphere	TPDPPYSTLNSCFSVFHSVWVHLGSFRNYMKLGAKRGELVQLMQKFVPRSDVGIFHNERTKSTPLDPKVMIRSVSLSLGAFGIVL
Ga0268308_10258801	3300028151	Phyllosphere	SFCNCMKLGAKRGELVQLMQKFVPRSHIGIFRNEHTLSTLLDPKVMFQYVLYYLRAFGIV
Ga0268349_10448121	3300028155	Phyllosphere	LHSILVHLGSFRNYMKLGAKRGELVQLMQKFVPRSDVGIFRNERTKSTPLDPKLMIRSVSLSLGAFGIVL
Ga0268312_10061652	3300028248	Phyllosphere	MKLDAKQGELVQLMQKFVSRSHVGIFCNERTQSTPLDPKLMLWCVAWCFGAFEIVSELHETRFKTV
Ga0268316_10158381	3300028253	Phyllosphere	LWFRNCMKLDAKRCELVQLMQKFVPQSHVRIFRNERTQSTPLDPELMFWCVAYCFGVFGIVS
Ga0268310_10009332	3300028262	Phyllosphere	LVQLMQKFVPRSDIGIFRNEHTKSNPLDPKLMIRSILLYLVAFGIVS
Ga0268310_10070381	3300028262	Phyllosphere	ELSAKRGELVQLMQKFMPRSHVGIFRNGHTQSTQLDPKVMFQYVSMYLGAFGIVS
Ga0268321_1101061	3300028466	Phyllosphere	NPPPLDIRSILVHLGSFRNCMKLGAKRGELEQLMQKFVPQNHVGIFRNERTKPTPLDPKLMIRSVLLYFGAFGIIS
Ga0268337_10088061	3300028469	Phyllosphere	CNYIKLDAKQGELVQLMQKFVPRSHVGIFRNERTQSTPLDPELMFWCIAYCLGAFGIDS
Ga0268337_10140701	3300028469	Phyllosphere	MKLDAKQGELVQLMQKFVPRSHIGIFCNERTQSTPLDPKLMFWCVAWCLGAFGIVSELHETRFK
Ga0268323_10209951	3300028471	Phyllosphere	SSPLDLHSILVHLGSFRNYMKLGAKRGELVQLMQKFVPRSDLRIFRNERTKSTPLDPKLMIRSVSLSLGAIGIVL
Ga0268315_10244221	3300028472	Phyllosphere	PLDLCNILVHLGSFRNCMKLGAKCGELVQLMQKFVPRSHVGIFRNGHTQSTQLDPKVMFRYVLMYLGAFGIIS
Ga0268327_10221891	3300028475	Phyllosphere	MKLGAKRDELVQLMQKFVPRSRIVIFGNERTRSTPLDPKLMFLCVSQYFGAFGNVSLLH
Ga0268305_1043301	3300028525	Phyllosphere	KLDAKQVELVQLMQKFVPRSHVGIFRNERTQSTPLDPELMFWCIAYCLGAFGIVS
Ga0268311_10036892	3300028529	Phyllosphere	ELVQLMQKFVPRTHVGIFRNERTQSTPLDPELMFWCIAYCLGAFGIDS
Ga0268311_10217291	3300028529	Phyllosphere	EMVQLLQKFMPQSDVGIFRNERTKSTPLDPKLMIRSVLLYLGAFGIVS
Ga0214490_11372811	3300032502	Switchgrass Phyllosphere	GSFPNCMKLGAKRDELVQLMQKFVPRSHIGIFRNGRTLSTPLDPKVMFQYVQYLGAFGIV
Ga0214497_11340821	3300032689	Switchgrass Phyllosphere	MFHYGSKLGAKQAEVVQLMQKFVPRSHIGIFRNERTXSTLSDPKIIFWCIFNHLGAFGTV
Ga0314769_13388321	3300033542	Switchgrass Phyllosphere	AKRGELVQLMQKFVPRSDVGIFRNERTKSTPLDPKLMIRSISLSLGAFGIVL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064345

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences