Metagenome Family F064431

Basic Information
Family ID	F064431
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	48 residues
Representative Sequence	KKKNREREGESEEGEKVIWCEELGKYGGVFIGGNGSIGYKHH
Number of Associated Samples	8
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Eukaryota
% of genes with valid RBS motifs	32.03 %
% of genes near scaffold ends (potentially truncated)	42.19 %
% of genes from short scaffolds (< 2000 bps)	30.47 %
Associated GOLD sequencing projects	7
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Most Common Taxonomy
Group	Eukaryota (67.969 % of family members)
NCBI Taxonomy ID	2759
Taxonomy	All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Roots → Nodule → Unclassified → Root Nodules (47.656 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.312 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 22.86% Coil/Unstructured: 77.14%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF03171	2OG-FeII_Oxy	3.12
PF00923	TAL_FSA	2.34
PF00078	RVT_1	2.34
PF13456	RVT_3	2.34
PF03193	RsgA_GTPase	2.34
PF07723	LRR_2	1.56
PF00108	Thiolase_N	1.56
PF05096	Glu_cyclase_2	1.56
PF05938	Self-incomp_S1	1.56
PF03311	Cornichon	1.56
PF00931	NB-ARC	1.56
PF07714	PK_Tyr_Ser-Thr	1.56
PF00201	UDPGT	0.78
PF05699	Dimer_Tnp_hAT	0.78
PF13410	GST_C_2	0.78
PF16900	REPA_OB_2	0.78
PF00665	rve	0.78
PF00924	MS_channel	0.78
PF03016	Exostosin	0.78
PF13401	AAA_22	0.78
PF06045	Rhamnogal_lyase	0.78
PF00180	Iso_dh	0.78
PF02798	GST_N	0.78
PF03372	Exo_endo_phos	0.78
PF06596	PsbX	0.78
PF05033	Pre-SET	0.78
PF02519	Auxin_inducible	0.78
PF04677	CwfJ_C_1	0.78
PF07727	RVT_2	0.78
PF04057	Rep-A_N	0.78
PF01485	IBR	0.78
PF00647	EF1G	0.78
PF05678	VQ	0.78
PF07847	PCO_ADO	0.78
PF05641	Agenet	0.78
PF14309	DUF4378	0.78
PF13966	zf-RVT	0.78
PF01490	Aa_trans	0.78
PF00141	peroxidase	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	6.25
COG0176	Transaldolase/fructose-6-phosphate aldolase	Carbohydrate transport and metabolism [G]	2.34
COG1162	Ribosome biogenesis GTPase RsgA	Translation, ribosomal structure and biogenesis [J]	2.34
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	1.56
COG1819	UDP:flavonoid glycosyltransferase YjiC, YdhE family	Carbohydrate transport and metabolism [G]	1.56
COG3823	Glutamine cyclotransferase	Posttranslational modification, protein turnover, chaperones [O]	1.56
COG0376	Catalase (peroxidase I)	Inorganic ion transport and metabolism [P]	0.78
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.78
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.78
COG0814	Amino acid permease	Amino acid transport and metabolism [E]	0.78
COG1599	ssDNA-binding replication factor A, large subunit	Replication, recombination and repair [L]	0.78
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.78
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.78
COG2940	SET domain-containing protein (function unknown)	General function prediction only [R]	0.78
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.78
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.78
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.53 %
Unclassified	root	N/A	30.47 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.53 %
Unclassified	root	N/A	30.47 %

Name	Rank	Taxonomy	Distribution
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	67.97 %
Unclassified	root	N/A	30.47 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.56 %

Name	Rank	Taxonomy	Distribution
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	67.97 %
Unclassified	root	N/A	30.47 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.56 %

Name	Rank	Taxonomy	Distribution
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	67.97 %
Unclassified	root	N/A	30.47 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.56 %

Name	Rank	Taxonomy	Distribution
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	67.97 %
Unclassified	root	N/A	30.47 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	1.56 %

Name	Rank	Taxonomy	Distribution
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	67.97 %
Unclassified	root	N/A	30.47 %
Lactobacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales	1.56 %

Name	Rank	Taxonomy	Distribution
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	48.44 %
Unclassified	root	N/A	30.47 %
Lactobacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae	1.56 %

Name	Rank	Taxonomy	Distribution
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	48.44 %
Unclassified	root	N/A	30.47 %
Levilactobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Levilactobacillus	1.56 %

Name	Rank	Taxonomy	Distribution
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	48.44 %
Unclassified	root	N/A	30.47 %
Levilactobacillus brevis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Levilactobacillus → Levilactobacillus brevis	1.56 %

Name	Rank	Taxonomy	Distribution
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	48.44 %
Unclassified	root	N/A	30.47 %
Levilactobacillus brevis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Levilactobacillus → Levilactobacillus brevis	1.56 %

Name	Rank	Taxonomy	Distribution
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	42.19 %
Unclassified	root	N/A	30.47 %
Levilactobacillus brevis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Levilactobacillus → Levilactobacillus brevis	1.56 %

Name	Rank	Taxonomy	Distribution
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	42.19 %
Unclassified	root	N/A	30.47 %
Levilactobacillus brevis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Levilactobacillus → Levilactobacillus brevis	1.56 %

Name	Rank	Taxonomy	Distribution
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	42.19 %
Unclassified	root	N/A	30.47 %
Levilactobacillus brevis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Levilactobacillus → Levilactobacillus brevis	1.56 %

Name	Rank	Taxonomy	Distribution
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	42.19 %
Unclassified	root	N/A	30.47 %
Levilactobacillus brevis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Levilactobacillus → Levilactobacillus brevis	1.56 %

Name	Rank	Taxonomy	Distribution
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	42.19 %
Unclassified	root	N/A	30.47 %
Levilactobacillus brevis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Levilactobacillus → Levilactobacillus brevis	1.56 %

Name	Rank	Taxonomy	Distribution
fabids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids	42.19 %
Unclassified	root	N/A	30.47 %
Levilactobacillus brevis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Levilactobacillus → Levilactobacillus brevis	1.56 %

Name	Rank	Taxonomy	Distribution
Fabales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales	42.19 %
Unclassified	root	N/A	30.47 %
Levilactobacillus brevis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Levilactobacillus → Levilactobacillus brevis	1.56 %

Name	Rank	Taxonomy	Distribution
Fabaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae	42.19 %
Unclassified	root	N/A	30.47 %
Levilactobacillus brevis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Levilactobacillus → Levilactobacillus brevis	1.56 %

Name	Rank	Taxonomy	Distribution
Papilionoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae	36.72 %
Unclassified	root	N/A	30.47 %
Levilactobacillus brevis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Levilactobacillus → Levilactobacillus brevis	1.56 %

Name	Rank	Taxonomy	Distribution
50 kb inversion clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade	36.72 %
Unclassified	root	N/A	30.47 %
Levilactobacillus brevis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Levilactobacillus → Levilactobacillus brevis	1.56 %

Name	Rank	Taxonomy	Distribution
NPAAA clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade	36.72 %
Unclassified	root	N/A	30.47 %
Levilactobacillus brevis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Levilactobacillus → Levilactobacillus brevis	1.56 %

Name	Rank	Taxonomy	Distribution
Hologalegina	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina	33.59 %
Unclassified	root	N/A	30.47 %
indigoferoid/millettioid clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade	3.12 %
Levilactobacillus brevis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Levilactobacillus → Levilactobacillus brevis	1.56 %

Name	Rank	Taxonomy	Distribution
IRL clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade	33.59 %
Unclassified	root	N/A	30.47 %
Phaseoleae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae	3.12 %
Levilactobacillus brevis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Levilactobacillus → Levilactobacillus brevis	1.56 %

Name	Rank	Taxonomy	Distribution
Trifolieae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae	33.59 %
Unclassified	root	N/A	30.47 %
Glycine	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Glycine	1.56 %
Levilactobacillus brevis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Levilactobacillus → Levilactobacillus brevis	1.56 %
Phaseolus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Phaseolus	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.47 %
Medicago	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago	22.66 %
Glycine subgen. Soja	subgenus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Glycine → Glycine subgen. Soja	1.56 %
Levilactobacillus brevis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Levilactobacillus → Levilactobacillus brevis	1.56 %
Phaseolus vulgaris	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Phaseolus → Phaseolus vulgaris	0.78 %
Trifolium	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Trifolium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.47 %
Medicago truncatula	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	22.66 %
Glycine max	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Glycine → Glycine subgen. Soja → Glycine max	1.56 %
Levilactobacillus brevis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Levilactobacillus → Levilactobacillus brevis	1.56 %
Trifolium subterraneum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Trifolium → Trifolium subterraneum	0.78 %
Phaseolus vulgaris	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Phaseolus → Phaseolus vulgaris	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300006948\|Ga0099826_10052993	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	2704	Open in IMG/M
3300006948\|Ga0099826_10055168	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	2633	Open in IMG/M
3300006948\|Ga0099826_10058992	Not Available	2512	Open in IMG/M
3300006948\|Ga0099826_10071953	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	2191	Open in IMG/M
3300006948\|Ga0099826_10084396	Not Available	1965	Open in IMG/M
3300006948\|Ga0099826_10090579	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	1873	Open in IMG/M
3300006948\|Ga0099826_10101380	Not Available	1736	Open in IMG/M
3300006948\|Ga0099826_10107016	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	1674	Open in IMG/M
3300006948\|Ga0099826_10116025	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1586	Open in IMG/M
3300006948\|Ga0099826_10123968	Not Available	1517	Open in IMG/M
3300006948\|Ga0099826_10182640	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	1165	Open in IMG/M
3300006948\|Ga0099826_10184827	Not Available	1156	Open in IMG/M
3300006948\|Ga0099826_10193055	Not Available	1121	Open in IMG/M
3300006948\|Ga0099826_10216964	Not Available	1033	Open in IMG/M
3300006948\|Ga0099826_10230971	Not Available	989	Open in IMG/M
3300006948\|Ga0099826_10248966	Not Available	938	Open in IMG/M
3300006948\|Ga0099826_10301531	Not Available	818	Open in IMG/M
3300006948\|Ga0099826_10339573	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	751	Open in IMG/M
3300006948\|Ga0099826_10418442	Not Available	646	Open in IMG/M
3300006948\|Ga0099826_10448464	Not Available	615	Open in IMG/M
3300006948\|Ga0099826_10462896	Not Available	601	Open in IMG/M
3300006948\|Ga0099826_10537088	Not Available	540	Open in IMG/M
3300006948\|Ga0099826_10583191	Not Available	510	Open in IMG/M
3300021254\|Ga0223824_10464167	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	1054	Open in IMG/M
3300022739\|Ga0228711_1000031	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae	93892	Open in IMG/M
3300022739\|Ga0228711_1000406	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	51121	Open in IMG/M
3300022739\|Ga0228711_1000480	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	48955	Open in IMG/M
3300022739\|Ga0228711_1001061	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae	38797	Open in IMG/M
3300022739\|Ga0228711_1001516	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	34298	Open in IMG/M
3300022739\|Ga0228711_1001690	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae	32983	Open in IMG/M
3300022739\|Ga0228711_1002129	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	30084	Open in IMG/M
3300022739\|Ga0228711_1003334	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae	24893	Open in IMG/M
3300022739\|Ga0228711_1003600	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	24091	Open in IMG/M
3300022739\|Ga0228711_1003796	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	23426	Open in IMG/M
3300022739\|Ga0228711_1004390	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	21724	Open in IMG/M
3300022739\|Ga0228711_1004606	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae	21157	Open in IMG/M
3300022739\|Ga0228711_1005073	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	20087	Open in IMG/M
3300022739\|Ga0228711_1005513	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	19227	Open in IMG/M
3300022739\|Ga0228711_1005608	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	19056	Open in IMG/M
3300022739\|Ga0228711_1006612	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	17138	Open in IMG/M
3300022739\|Ga0228711_1007547	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	15693	Open in IMG/M
3300022739\|Ga0228711_1008208	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	14763	Open in IMG/M
3300022739\|Ga0228711_1010467	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	12179	Open in IMG/M
3300022739\|Ga0228711_1011231	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	11451	Open in IMG/M
3300022739\|Ga0228711_1011371	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae	11330	Open in IMG/M
3300022739\|Ga0228711_1011839	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	10914	Open in IMG/M
3300022739\|Ga0228711_1012381	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae	10450	Open in IMG/M
3300022739\|Ga0228711_1012589	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	10301	Open in IMG/M
3300022739\|Ga0228711_1013556	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	9531	Open in IMG/M
3300022739\|Ga0228711_1016389	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	7739	Open in IMG/M
3300022739\|Ga0228711_1017119	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	7330	Open in IMG/M
3300022739\|Ga0228711_1017862	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae	6922	Open in IMG/M
3300022739\|Ga0228711_1018188	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	6751	Open in IMG/M
3300022739\|Ga0228711_1019360	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	6213	Open in IMG/M
3300022739\|Ga0228711_1021769	Not Available	5192	Open in IMG/M
3300022739\|Ga0228711_1022470	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	4933	Open in IMG/M
3300022739\|Ga0228711_1023343	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	4624	Open in IMG/M
3300022739\|Ga0228711_1023658	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	4523	Open in IMG/M
3300022739\|Ga0228711_1024210	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	4346	Open in IMG/M
3300022739\|Ga0228711_1024802	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae	4164	Open in IMG/M
3300022739\|Ga0228711_1024879	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	4141	Open in IMG/M
3300022739\|Ga0228711_1031792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Levilactobacillus → Levilactobacillus brevis	2556	Open in IMG/M
3300022739\|Ga0228711_1032203	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	2486	Open in IMG/M
3300022739\|Ga0228711_1032750	Not Available	2398	Open in IMG/M
3300022739\|Ga0228711_1034002	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	2208	Open in IMG/M
3300022739\|Ga0228711_1034832	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	2095	Open in IMG/M
3300022739\|Ga0228711_1043470	Not Available	1234	Open in IMG/M
3300022739\|Ga0228711_1056438	Not Available	685	Open in IMG/M
3300022739\|Ga0228711_1061592	Not Available	568	Open in IMG/M
3300022740\|Ga0228710_1001148	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	38620	Open in IMG/M
3300022740\|Ga0228710_1001158	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	38448	Open in IMG/M
3300022740\|Ga0228710_1001396	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	36017	Open in IMG/M
3300022740\|Ga0228710_1001477	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae	35352	Open in IMG/M
3300022740\|Ga0228710_1002863	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae	27407	Open in IMG/M
3300022740\|Ga0228710_1003515	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae	24907	Open in IMG/M
3300022740\|Ga0228710_1003816	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae	23909	Open in IMG/M
3300022740\|Ga0228710_1005190	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	20296	Open in IMG/M
3300022740\|Ga0228710_1007412	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	16197	Open in IMG/M
3300022740\|Ga0228710_1008553	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	14641	Open in IMG/M
3300022740\|Ga0228710_1015807	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae	8117	Open in IMG/M
3300022740\|Ga0228710_1017670	Not Available	6999	Open in IMG/M
3300022740\|Ga0228710_1017815	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	6928	Open in IMG/M
3300022740\|Ga0228710_1018653	Not Available	6488	Open in IMG/M
3300022740\|Ga0228710_1031135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Levilactobacillus → Levilactobacillus brevis	2556	Open in IMG/M
3300022740\|Ga0228710_1042539	Not Available	1248	Open in IMG/M
3300027666\|Ga0209282_1096511	Not Available	1534	Open in IMG/M
3300027666\|Ga0209282_1115683	Not Available	1352	Open in IMG/M
3300027666\|Ga0209282_1154540	Not Available	1104	Open in IMG/M
3300027666\|Ga0209282_1174639	Not Available	1013	Open in IMG/M
3300027666\|Ga0209282_1242677	Not Available	801	Open in IMG/M
3300027666\|Ga0209282_1282492	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	715	Open in IMG/M
3300031967\|Ga0315914_1001383	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae	35912	Open in IMG/M
3300031967\|Ga0315914_1003130	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Trifolium → Trifolium subterraneum	25213	Open in IMG/M
3300031967\|Ga0315914_1004121	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	21782	Open in IMG/M
3300031967\|Ga0315914_1009363	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	12628	Open in IMG/M
3300031967\|Ga0315914_1010198	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae	11767	Open in IMG/M
3300031967\|Ga0315914_1011516	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	10570	Open in IMG/M
3300031967\|Ga0315914_1018383	Not Available	6285	Open in IMG/M
3300031967\|Ga0315914_1019685	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Glycine → Glycine subgen. Soja → Glycine max	5721	Open in IMG/M
3300031967\|Ga0315914_1020225	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae	5507	Open in IMG/M
3300031967\|Ga0315914_1020382	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Phaseolus → Phaseolus vulgaris	5451	Open in IMG/M
3300031967\|Ga0315914_1026089	Not Available	3685	Open in IMG/M
3300031967\|Ga0315914_1027923	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	3273	Open in IMG/M
3300031967\|Ga0315914_1044233	Not Available	1324	Open in IMG/M
3300033430\|Ga0315913_1006370	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	14281	Open in IMG/M
3300033430\|Ga0315913_1011482	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	10009	Open in IMG/M
3300033430\|Ga0315913_1017547	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	7160	Open in IMG/M
3300033430\|Ga0315913_1020241	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Glycine → Glycine subgen. Soja → Glycine max	6217	Open in IMG/M
3300033430\|Ga0315913_1022664	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	5510	Open in IMG/M
3300033430\|Ga0315913_1031305	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae	3702	Open in IMG/M
3300033430\|Ga0315913_1033917	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	3301	Open in IMG/M
3300033430\|Ga0315913_1053418	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	1523	Open in IMG/M
3300033430\|Ga0315913_1062278	Not Available	1135	Open in IMG/M
3300033430\|Ga0315913_1064030	Not Available	1077	Open in IMG/M
3300033430\|Ga0315913_1087194	Not Available	631	Open in IMG/M
3300033430\|Ga0315913_1091419	Not Available	586	Open in IMG/M
3300033464\|Ga0315915_1000615	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	38234	Open in IMG/M
3300033464\|Ga0315915_1008003	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	12466	Open in IMG/M
3300033464\|Ga0315915_1014989	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	7595	Open in IMG/M
3300033464\|Ga0315915_1018314	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	6228	Open in IMG/M
3300033464\|Ga0315915_1021024	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae	5352	Open in IMG/M
3300033464\|Ga0315915_1026917	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae → Medicago → Medicago truncatula	4006	Open in IMG/M
3300033464\|Ga0315915_1028032	Not Available	3791	Open in IMG/M
3300033464\|Ga0315915_1036910	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae	2595	Open in IMG/M
3300033464\|Ga0315915_1039282	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → Hologalegina → IRL clade → Trifolieae	2358	Open in IMG/M
3300033464\|Ga0315915_1050745	Not Available	1576	Open in IMG/M
3300033464\|Ga0315915_1062145	Not Available	1120	Open in IMG/M
3300033464\|Ga0315915_1075778	Not Available	797	Open in IMG/M

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
Powered by PDBe Molstar

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	99.22%
Mammals	Host-Associated → Mammals	0.78%

Habitat	Taxonomy	Distribution
Roots	Host-Associated → Plants → Roots	47.66%
Nodule	Host-Associated → Plants → Nodule	28.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.66%
Digestive System	Host-Associated → Mammals → Digestive System	0.78%

Habitat	Taxonomy	Distribution
Nodule	Host-Associated → Plants → Roots → Nodule	47.66%
Unclassified	Host-Associated → Plants → Nodule → Unclassified	28.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.66%
Foregut	Host-Associated → Mammals → Digestive System → Foregut	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Roots → Nodule → Unclassified	47.66%
Unclassified	Host-Associated → Plants → Nodule → Unclassified → Unclassified	28.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.66%
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen	0.78%

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F064431

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300006948	Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15	Host-Associated	Open in IMG/M
3300021254	Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assembly	Host-Associated	Open in IMG/M
3300022739	Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules	Host-Associated	Open in IMG/M
3300022740	Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules	Host-Associated	Open in IMG/M
3300027666	Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes)	Host-Associated	Open in IMG/M
3300031967	Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - elongated nodules	Host-Associated	Open in IMG/M
3300033430	Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - small nodules	Host-Associated	Open in IMG/M
3300033464	Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - branched nodules	Host-Associated	Open in IMG/M

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0099826_100529934	3300006948	Root Nodules	VARERREIEGESEEGEKVIWCEEIGKYEGVFISGNGSLGYNNHKCDQKKCKLNVEN*
Ga0099826_100551682	3300006948	Root Nodules	MKKERREIEGESEKGEKVIWCEEIGKYGEVFLGGNVGYNHHKYGQKNV*
Ga0099826_100589921	3300006948	Root Nodules	MTRDLLKKKKRKIEGEKVIWCEEIWKYGGEFIGGNGSICNHHKCGQKNM*
Ga0099826_100719535	3300006948	Root Nodules	MKKRKKEIEGESEEGEKVIWCEEIGKYRGVFIGENGSVGYNHHKCGQKNV*
Ga0099826_100843961	3300006948	Root Nodules	MTRDYKKREIEGESGEGDKVIWCEEIRKYEGVFIGGNGNIGYNNHKCGQKNV
Ga0099826_100905794	3300006948	Root Nodules	LQKRRREIEGESEEGERVIWCEEIGKYGGVFIGGNCSISYKKP*
Ga0099826_101013801	3300006948	Root Nodules	KRRREREGESEEGEKVIWCEELGKYGGVFIGGNGRIGYKHH*
Ga0099826_101070161	3300006948	Root Nodules	LPPKRLLKKRRRREIEGESEEGEKVIWCEEIVKYGGVFIGENGSIGYKYH*
Ga0099826_101160254	3300006948	Root Nodules	LPQREKRLLKKKREIEGESEEGEKVIWCEELGKYGGVFIGGNGSISYKHH*
Ga0099826_101239682	3300006948	Root Nodules	MKEKERREIEGESEEGEKVIWCEEIRKYGGVFIGGNDSVGYNHHKCGQKNM*
Ga0099826_101826401	3300006948	Root Nodules	KKKEKMGDTVRRCEEMGKFGGVFIGGNGSIGYNYHKCSKKYT*
Ga0099826_101848271	3300006948	Root Nodules	EGESEEGEKVIWCEELGKYGRVFIGGIGSIGFKHH*
Ga0099826_101930551	3300006948	Root Nodules	EIEGESEEGEKVIWCEEIGKYVGVFIGGNGSIGYNYNKCGQKNV*
Ga0099826_102169641	3300006948	Root Nodules	RRFIGGESEEESENVRWCEEIGKFGGVFIGGNDSIGYNYHKCS*
Ga0099826_102309712	3300006948	Root Nodules	REIEGESEEGEKVIWCEEIRKYGGMFIGRNGSIGYNNHKCGKKNV*
Ga0099826_102489661	3300006948	Root Nodules	VTRDLLNLLKERIIEGEGEEGEKVIWCEEIGKYGGVFIGGNGSIGYNHHKCGKKKRVEVVKNV*
Ga0099826_103015311	3300006948	Root Nodules	LKKKRRRERGGESEEGEKEIWCEEIGKYGGVFMGVYDNIGYNYHKCGQKNV*
Ga0099826_103395732	3300006948	Root Nodules	LTKKEREREGESEEGEKMIWCEELGKYGGVFIGGNGSIG*
Ga0099826_104184421	3300006948	Root Nodules	LPPKRLLTKKKNREREEESEEGEKVIWREELGKYGAVFIGGNGSIGYKHH*
Ga0099826_104484642	3300006948	Root Nodules	LISFTPKETIDKKKRREREGKSEEGEKVIWCEELGKYGGVFISGNGSIGYKHH*
Ga0099826_104628962	3300006948	Root Nodules	MKKRKKRIEGESEEGEKVIWCEEIGKYGGVFIGENGSVGYNHHKCGQKNV*
Ga0099826_105370882	3300006948	Root Nodules	LPPKRLLKKKEKKIEGESEEGEKVIWCEEIGKYGGLFIGENGSIGYKYGGF*
Ga0099826_105831911	3300006948	Root Nodules	QKNIEKKTRRREIEGESEDGEKVIWCEKIGRYRGIFIGGNGSIGYKYR*
Ga0223824_104641671	3300021254	Cattle And Sheep Rumen	LKKRKERREIEGESEEGEKVIWCEELGKYGGVFIGRNVNLGCNYHKYGQKKRVKW
Ga0228711_100003126	3300022739	Root Nodules	LKEKKREIEGESEEGEKVIWCEEIRKYGGVFIGGNDSIGYKHH
Ga0228711_100040615	3300022739	Root Nodules	LTKKEREREGESEEGEKMIWCEELGKYGGVFIGGNGSIGYKHH
Ga0228711_100048026	3300022739	Root Nodules	LKKKREIEGESEEGEKVIWCEKIGKYGGVFIGENGSISYKDHKCGKKKCKWCKKNV
Ga0228711_100106111	3300022739	Root Nodules	VARERREIEGESEEGEKVIWCEEIGKYEGVFISGNGSLGYNNHKCDQKKCKLNVEN
Ga0228711_100151619	3300022739	Root Nodules	LPPKRLLKKRRRREIEGESEEGEKVIWCEEIVKYGGVFIGENGSIGYKYH
Ga0228711_100169031	3300022739	Root Nodules	LRKKKREIKGGSEEREKVIWCEEIGKYEGVFIGGNGSIGYNYNKCGQKNV
Ga0228711_10021291	3300022739	Root Nodules	REREGESEEGEKVIWCEELGKYGGVFIGGNGSIGYKHH
Ga0228711_100333417	3300022739	Root Nodules	KREIEGESEEGEKVIWCEVIGKYGGVFIGENGSISYNNHKCGQKTCKLGKKNV
Ga0228711_10036003	3300022739	Root Nodules	VTRDLLKKEKKREIEGETEEGEKVIWCEKIEKYGGVFIGGNGSIGYNHHKCGQKYV
Ga0228711_100379617	3300022739	Root Nodules	MKKERREIEGESEKGEKVIWCEEIGKYGEVFLGGNVGYNHHKYGQKNV
Ga0228711_10043908	3300022739	Root Nodules	MTRDYXKKREIEGESGEGDKVIWCEEIRKYEGVFIGGNGNIGYNNHKCGQKNV
Ga0228711_10046061	3300022739	Root Nodules	LKKKREIEGESEEGEKVIWCEEIGKYGGVFIGGNGSVGYKNHNCGQKNV
Ga0228711_10050734	3300022739	Root Nodules	LTKKKREREGESEEGEKVIWCEELGKYGGVFIGENGSIGYKHH
Ga0228711_10055134	3300022739	Root Nodules	VTRDYWKKKKERREIEGESEEGEKVIWCEEIGKYEGVFIGGNGSIGYNYHKCGQKNM
Ga0228711_10056081	3300022739	Root Nodules	LPPKSILKKKKEKEREGESEEGEKVIWYEELGKYGGVFIGGNSSIGYKHH
Ga0228711_10066128	3300022739	Root Nodules	LQKRRREIEGESEEGERVIWCEEIGKYGGVFIGGNCSISYKKP
Ga0228711_10075471	3300022739	Root Nodules	KRRKEKKKREIEIEGESEEGEKVIWCEEIGKYVGVFIGGNGSIGYNYNKCGQKNV
Ga0228711_10082083	3300022739	Root Nodules	LKKKREIEGESEEGEKVIWCEEIRKYGGVFIGGNGSVGYKNHKYGKKNV
Ga0228711_10104678	3300022739	Root Nodules	LKTKREIEGESEEGKKVIWCEELGKYGGIFIGGNDSIGYKYH
Ga0228711_101123111	3300022739	Root Nodules	REEESEEGEKVIWREELGKYGAVFIGGNGSIGYKHH
Ga0228711_10113713	3300022739	Root Nodules	MTRDLLKKKKRKIEGEKVIWCEEIWKYGGEFIGGNGSICNHHKRGQKNM
Ga0228711_101183912	3300022739	Root Nodules	LKRKKRREIEGESEEGEKVIWCEEIGKYGGVFIGENGSIVITTINVVKKMCKLGKKNV
Ga0228711_10123819	3300022739	Root Nodules	LPQREKRLLKKKREIEGESEEGEKVIWCEELGKYGGVFIGGNGSISYKHH
Ga0228711_10125892	3300022739	Root Nodules	MKEKERREIEGESEEGEKVIWCEEIRKYGGVFIGGNDSVGYNHHKCGQKNM
Ga0228711_10135565	3300022739	Root Nodules	RLLKKEKKKREIEGEKVIWCEEIGKYEGVFIGENGSISYNRHKCGQKNMQIR
Ga0228711_10163894	3300022739	Root Nodules	KKKKKKEGESEEGEKVIWCEESGKYGGVFIGGNGSIDNKHH
Ga0228711_10171197	3300022739	Root Nodules	LKKKKKREIEGDSEEGEKVIWCEEIGKYGGVFVGGNGSIGYKHH
Ga0228711_10178621	3300022739	Root Nodules	LKKKREIEGESEEGVKVIWCEEIGKYGGVFIGGNGSIGYNNHKCGQKNM
Ga0228711_10181882	3300022739	Root Nodules	VTRDYWKRKKRREIEGESEEGEKVIWCEEIGKYRGVFIGGNGSIDYKNHICGQKNV
Ga0228711_10193603	3300022739	Root Nodules	VTKDYWKEKRRREIEGESEEGEKVIWCEEIGKYGGIFIGGNGSIDYSNHIFGQKNV
Ga0228711_10217694	3300022739	Root Nodules	QFCPQRDYWQKKKREREGESEEEEKVIWCEELGKYGGLFIGGNGSIGYKHH
Ga0228711_10224705	3300022739	Root Nodules	LNEKRRRREIERESEEGEKVIWCEEIGKYGGVFIGENGSIGYNNHKCGQNNV
Ga0228711_10233435	3300022739	Root Nodules	LPPKRLLKKKEKKIEGESEEGEKVIWCEEIGKYGGLFIGENGSIGYKYGGF
Ga0228711_10236582	3300022739	Root Nodules	LKKRRREIEGDSEEGEKVIWCGEIGKYGGVFIDGNDSIGYKHH
Ga0228711_10242102	3300022739	Root Nodules	MKKRKKRIEGESEEGEKVIWCEEIGKYGGVFIGENGSVGYNHHKCGQKNV
Ga0228711_10248025	3300022739	Root Nodules	VTRDYLKKRREIEGESEEGEKVIWCEEIGKYGGVFICQNGSISYNYHKCGKKNV
Ga0228711_10248795	3300022739	Root Nodules	VTREIEGESEEGEKVIWCEEIRKYGGMFIGRNGSIGYNNHKCGKKNV
Ga0228711_10317923	3300022739	Root Nodules	NIDKKKKEREGESEEGEKVIWCEESGKYGGVFIGGNCSTGYKHH
Ga0228711_10322034	3300022739	Root Nodules	LPPKRVLKKKTRREIEGESEEGGKVIWCEEIGKYRGVFIGGNDSIGYKYH
Ga0228711_10327501	3300022739	Root Nodules	QMKKKKKKRNRGGSEEGEKVIWCEEIWKYGGVFIGGNGSIGYNNHKCGQKNV
Ga0228711_10340021	3300022739	Root Nodules	LIAFAPKETIDKKTKREREGESEEGEKVIWCEELGKYGGVFIGGNGSIGYKHH
Ga0228711_10348322	3300022739	Root Nodules	LITFAPKETIDKKKNREGESEEGEKVIWCEELGKYGGVFIGGNGSIG
Ga0228711_10434703	3300022739	Root Nodules	KRILKKKKREREGESEEGEKMIWCAELGMYGGVFIGGNDNIDYKHH
Ga0228711_10564381	3300022739	Root Nodules	KREREEENEEGEKVIWCEELGKYGEVFICGNDSIGYKHY
Ga0228711_10615921	3300022739	Root Nodules	MKRKKEKKKREIEIEGESEEGEKVIWCEEIGKYVGVFIGGNGSIG
Ga0228710_10011481	3300022740	Root Nodules	LTKKKEKEREGESEEGEKVIWYEELGKYGGVFIGGNSSIGYKHH
Ga0228710_10011581	3300022740	Root Nodules	ERERESGEGEKVIWCEELGKYGGVFIGGNGSIGYKHH
Ga0228710_10013961	3300022740	Root Nodules	KKKKKEIEGEKVIWCEEIGKYGAVFIGENGSIGYNKHKCGQKNV
Ga0228710_100147732	3300022740	Root Nodules	FAPKETIDKKKRKRRERVGESEEGEKVIWCEKLGKYEGVFIGGNGSIGYKHH
Ga0228710_10028638	3300022740	Root Nodules	LTKKKNREREEESEEGEKVIWREELGKYGAVFIGGNGSIGYKHH
Ga0228710_100351511	3300022740	Root Nodules	KRKKKKREIEGESEEGEKVIWCEVIGKYGGVFIGENGSISYNNHKCGQKTCKLGKKNV
Ga0228710_10038161	3300022740	Root Nodules	LPQKRLLKKKRREIEGESEEGKKVIWCEELGKYGGVFIDENGSICYKYH
Ga0228710_10051909	3300022740	Root Nodules	LSPKRLLKKKKREREGESEEGEKVIWCEELGKYGGVFIGENGSIGYKHH
Ga0228710_100741212	3300022740	Root Nodules	MKRKKEKKKREIEIEGESEEGEKVIWCEEIGKYVGVFIGGNGSIGYNYNKCGQKNV
Ga0228710_10085536	3300022740	Root Nodules	VTRDLLKNKKKKRNRGGSEEGEKVIWCEEIWKYGGVFIGGNGSIGYNNHKCGQKNV
Ga0228710_10158078	3300022740	Root Nodules	PKENIEKKKKREGESEEAEKVIWCEELGKYGGVFIGGNGSIGYKHH
Ga0228710_10176701	3300022740	Root Nodules	YRKKKKREREGESEEGEKVIWCEELGKYGGVFIGGNGSIDYKHH
Ga0228710_10178151	3300022740	Root Nodules	LLKKKKKREIEGDSEEGEKVIWCEEIGKYGGVFVGGNGSIGYKHH
Ga0228710_10186533	3300022740	Root Nodules	PKRLLTKKKKKEGESEEGEKVIWCEESGKYGGVFIGGNGSIDNKHH
Ga0228710_10311353	3300022740	Root Nodules	KKKKEREGESEEGEKVIWCEESGKYGGVFIGGNCSTGYKHH
Ga0228710_10425391	3300022740	Root Nodules	KKREREEENEEGEKVIWCEELGKYGEVFICGNDSIGYKHY
Ga0209282_10965111	3300027666	Root Nodules	ERESEEGEKMIWCEKLGKYGGVFIGGNDSIGYKHH
Ga0209282_11156831	3300027666	Root Nodules	KKKREIEGEKVIWCEEIGKYGGVFIGGNDSIGYNYHKCGKKKNV
Ga0209282_11545402	3300027666	Root Nodules	KKKKIEGESEEGGKVIWCEEIWKYGGVFIGRNGTIGCKYH
Ga0209282_11746391	3300027666	Root Nodules	LPPKRLLTKKKNREREEESEEGEKVIWREELGKYGAVFIGGNGSIGYKHH
Ga0209282_12426771	3300027666	Root Nodules	LKEKKREIEGESEEGEKVIWCEEIRKYGGVFIGGNDSIGYKHHSCGPKTCIMGKKRVD
Ga0209282_12824921	3300027666	Root Nodules	LKKKKKREIEGESEEGEKVIWCEEIGKYGGVFIGENGSIGYKHH
Ga0315914_10013833	3300031967	Root Nodules	LTKKKREREGESEEGEKVIWFEELGKYGGVFTCGNGSIGYKHH
Ga0315914_10031308	3300031967	Root Nodules	MDKIKREREGESEEGEKVIWCEELGRKYGGVFIGGNGSIGYKHH
Ga0315914_100412116	3300031967	Root Nodules	RILITFAPKETIDKKKKREGESEEAEKVIWCEELGKYGGVFIGGNGSIGYKHH
Ga0315914_10093634	3300031967	Root Nodules	LPPKRKETIEKKRRREIEGESEEGEKVIWCEKIGKYGGVFIGGNSSIGYKHH
Ga0315914_10101982	3300031967	Root Nodules	LISFTPKETIDKKKRREREGKSEEGEKVIWCEELGKYGGVFISGNGSIGYKHH
Ga0315914_10115166	3300031967	Root Nodules	LTKKKREREGESEEGEKMIWCAELGMYGGVFIGGNDNIDYKHH
Ga0315914_10183831	3300031967	Root Nodules	QRDYXQKKKREREGESEEGEKVIWCEELGKYGGVFIGGNGSIDYKHH
Ga0315914_10196856	3300031967	Root Nodules	KKKNREREGESEEGEKVIWCEELGKYGGVFIGGNGSIGYKHH
Ga0315914_10202254	3300031967	Root Nodules	VTRDYLKKRREIEGESEEGEKVIWCEEIWKYGGVFICQNGSISYNYHKCGKKNV
Ga0315914_10203821	3300031967	Root Nodules	LKEKKRREIEGESEEGEKVIWCEEIGKYGGVFIGENGSIGYNNHKCGQKNV
Ga0315914_10260891	3300031967	Root Nodules	LITFAPTRLLTKKKTEREREGESEERDKVIWCEELGKYEGVFIGGNDSIGYKHH
Ga0315914_10279231	3300031967	Root Nodules	LKQKRREIEGESEEGEKVIWCGEIGKYEGVFIDGNDSIGYKHH
Ga0315914_10442331	3300031967	Root Nodules	LKKKRREIEGESEEGEKVIWCEEIGKYGGVFIGGNGSIGYKHHYCGQKNVYNE
Ga0315913_100637015	3300033430	Root Nodules	LITFAPKETIDKKKKREGESEEAEKVIWCEELGKYGGVFIGGNGSIGYKHH
Ga0315913_10114825	3300033430	Root Nodules	LKKEKKKREIEGEKVIWCEEIGKYEGVFIGENGSISYNRHKCGQKNMQIR
Ga0315913_10175473	3300033430	Root Nodules	VTRDLLNLLKERIIEGEGEEGEKVIWCEEIGKYGGVFIGGNGSIGYNHHKCGKKNV
Ga0315913_10202411	3300033430	Root Nodules	LPPKRLLTKKKKNREREGESEEGEKVIWCEELGKYGGVFIGGNGSIGYKHH
Ga0315913_10226648	3300033430	Root Nodules	EVXSLLPPKSLLTKKKEKEREGESEEGEKVIWYEELGKYGGVFIGGNSSIGYKHH
Ga0315913_10313051	3300033430	Root Nodules	KERREREGESEEGEKVIRCEEIGKYGAVFIGENGSIGYNKHKCGKKNV
Ga0315913_10339174	3300033430	Root Nodules	KKLFNKKKKREIEGDSEEGEKVIWCEEIGKYGGVFVGGNGSIGYKHH
Ga0315913_10534183	3300033430	Root Nodules	RREIEGESEEGEKVIWCEEIVKYGGVFIGENGSIGYKYH
Ga0315913_10622781	3300033430	Root Nodules	LKKKREIEGESEEGEKVIWCEEIRKYGGVFIGGNGSVGY
Ga0315913_10640302	3300033430	Root Nodules	LLTKKKREREGESEEGEKMIWCAELGMYGGVFIGGNDNIDYKHH
Ga0315913_10871942	3300033430	Root Nodules	FCPKKTIDNKKQREREGESEVGEKVIWCEELGKYGGVFIGGNGDSIGYKHH
Ga0315913_10914192	3300033430	Root Nodules	KRRRQIEGESEEGKKVIWCEKIEKYGGVFIGGNGSIGYNYHKCGQKNV
Ga0315915_100061533	3300033464	Root Nodules	ERERERESGEGEKVIWCEELGKYGGVFIGGNGSIGYKHH
Ga0315915_100800311	3300033464	Root Nodules	KKNREREEESEEGEKVIWREELGKYGAVFIGGNGSIGYKHH
Ga0315915_101498910	3300033464	Root Nodules	EREGESEEGEKVIWCEELGKYGGVFIGGNGSIGYKHH
Ga0315915_10183147	3300033464	Root Nodules	RGIKSLETIEQKRRREREGESEEGEKVIWCEELGKYGGVFIGGNGSIGYRHH
Ga0315915_10210245	3300033464	Root Nodules	REGESEEGEKVIWCEELGKYRGVFIGGNGSIGYKHH
Ga0315915_10269171	3300033464	Root Nodules	REGESEEEEKVIWREELGKYGGVFIVENGSIGYKHH
Ga0315915_10280322	3300033464	Root Nodules	LPSKRKETIEKKKKREIEGESEKGYKVIWSEELGKHGGVFIGGMVV
Ga0315915_10369101	3300033464	Root Nodules	LITSPKLATHHLPQVTRDYLKKRREIEGESEEGEKVIWCEEIGKYGGVFICQNGSISYNYHKCGKKNV
Ga0315915_10392823	3300033464	Root Nodules	CSLLPPKRLLKKKGKEMEGESEDGAKVIWREEIRKYGGVFIGGLR
Ga0315915_10507451	3300033464	Root Nodules	QKRRREREGESEEGEKVIWCEELGKYGGVFIGGNGRIGYKHH
Ga0315915_10621451	3300033464	Root Nodules	LEILKKKKKRNKGREXGGRKVIWCEEIRKYGKVFIGGNGIIGYNKHKCGQKNM
Ga0315915_10757781	3300033464	Root Nodules	KKKQREREGESEKGKKVIWCEELGKYGGVFIGGNGSIGYKHH

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign