Metagenome Family F064463

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064463
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	79 residues
Representative Sequence	MKIVVPAVVSLALTANLADQVTAAPLRNKKQAHRQHTMTKPPPRPQQGGSDYYENLLDKVPFGSERWWLIKQRRGGGGM
Number of Associated Samples	53
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.81 %
% of genes near scaffold ends (potentially truncated)	25.78 %
% of genes from short scaffolds (< 2000 bps)	87.50 %
Associated GOLD sequencing projects	48
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.250 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (40.625 % of family members)
Environment Ontology (ENVO)	Unclassified (67.188 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (85.938 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 29.91% β-sheet: 0.00% Coil/Unstructured: 70.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00724	Oxidored_FMN	7.81
PF03061	4HBT	3.12
PF04828	GFA	2.34
PF01435	Peptidase_M48	1.56
PF12697	Abhydrolase_6	1.56
PF08811	DUF1800	0.78
PF00873	ACR_tran	0.78
PF04392	ABC_sub_bind	0.78
PF00583	Acetyltransf_1	0.78
PF01019	G_glu_transpept	0.78
PF13180	PDZ_2	0.78
PF02371	Transposase_20	0.78
PF05199	GMC_oxred_C	0.78
PF00656	Peptidase_C14	0.78
PF05990	DUF900	0.78
PF00296	Bac_luciferase	0.78
PF02735	Ku	0.78
PF13358	DDE_3	0.78
PF02518	HATPase_c	0.78
PF07883	Cupin_2	0.78
PF13505	OMP_b-brl	0.78
PF13676	TIR_2	0.78
PF14026	DUF4242	0.78
PF14375	Cys_rich_CWC	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	7.81
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	7.81
COG3791	Uncharacterized conserved protein	Function unknown [S]	2.34
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	0.78
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.78
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.78
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.78
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.78
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.78
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	0.78
COG4782	Esterase/lipase superfamily enzyme	General function prediction only [R]	0.78
COG5267	Uncharacterized conserved protein, DUF1800 family	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
All Organisms	root	All Organisms	43.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
cellular organisms	root	All Organisms → cellular organisms	43.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	27.34 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.28 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.81 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	2.34 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.81 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	4.69 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	3.12 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.34 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.56 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.78 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.81 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	3.91 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.12 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.34 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.56 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.78 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.78 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.81 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	3.91 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.12 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.34 %
Bradyrhizobium manausense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	0.78 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.78 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.78 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10047550	All Organisms → cellular organisms → Bacteria	1883	Open in IMG/M
3300004633\|Ga0066395_10671792	Not Available	613	Open in IMG/M
3300005332\|Ga0066388_100095685	Not Available	3414	Open in IMG/M
3300005332\|Ga0066388_100123694	All Organisms → cellular organisms → Bacteria → Proteobacteria	3116	Open in IMG/M
3300005332\|Ga0066388_100206692	All Organisms → cellular organisms → Bacteria → Proteobacteria	2587	Open in IMG/M
3300005332\|Ga0066388_101090331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1350	Open in IMG/M
3300005332\|Ga0066388_101328108	All Organisms → cellular organisms → Bacteria → Proteobacteria	1242	Open in IMG/M
3300005332\|Ga0066388_101600569	All Organisms → cellular organisms → Bacteria → Proteobacteria	1146	Open in IMG/M
3300005332\|Ga0066388_102709188	Not Available	905	Open in IMG/M
3300005332\|Ga0066388_102776025	Not Available	894	Open in IMG/M
3300005332\|Ga0066388_103830316	Not Available	768	Open in IMG/M
3300005332\|Ga0066388_104059678	Not Available	746	Open in IMG/M
3300005332\|Ga0066388_104297115	Not Available	726	Open in IMG/M
3300005332\|Ga0066388_104687125	Not Available	696	Open in IMG/M
3300005332\|Ga0066388_105588819	Not Available	636	Open in IMG/M
3300005332\|Ga0066388_107096713	Not Available	563	Open in IMG/M
3300005713\|Ga0066905_100385302	Not Available	1132	Open in IMG/M
3300005713\|Ga0066905_100458900	Not Available	1049	Open in IMG/M
3300005713\|Ga0066905_101669128	Not Available	585	Open in IMG/M
3300005764\|Ga0066903_100199404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2991	Open in IMG/M
3300005764\|Ga0066903_100375707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2319	Open in IMG/M
3300005764\|Ga0066903_100641366	All Organisms → cellular organisms → Bacteria → Proteobacteria	1854	Open in IMG/M
3300005764\|Ga0066903_100749306	Not Available	1734	Open in IMG/M
3300005764\|Ga0066903_100844773	Not Available	1646	Open in IMG/M
3300005764\|Ga0066903_100988453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1536	Open in IMG/M
3300005764\|Ga0066903_101292376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1362	Open in IMG/M
3300005764\|Ga0066903_102470338	Not Available	1006	Open in IMG/M
3300005764\|Ga0066903_103854779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	805	Open in IMG/M
3300005764\|Ga0066903_107119060	Not Available	579	Open in IMG/M
3300006852\|Ga0075433_11281012	Not Available	635	Open in IMG/M
3300006871\|Ga0075434_100073167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3420	Open in IMG/M
3300006871\|Ga0075434_102288049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300009792\|Ga0126374_10065856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1915	Open in IMG/M
3300009792\|Ga0126374_10107921	Not Available	1597	Open in IMG/M
3300009792\|Ga0126374_10171095	Not Available	1342	Open in IMG/M
3300009792\|Ga0126374_10439712	Not Available	923	Open in IMG/M
3300009792\|Ga0126374_10735247	Not Available	746	Open in IMG/M
3300009792\|Ga0126374_11039533	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300010043\|Ga0126380_10212673	Not Available	1305	Open in IMG/M
3300010043\|Ga0126380_10292483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1154	Open in IMG/M
3300010043\|Ga0126380_10378917	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300010046\|Ga0126384_10096776	All Organisms → cellular organisms → Bacteria	2167	Open in IMG/M
3300010046\|Ga0126384_10150352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1792	Open in IMG/M
3300010046\|Ga0126384_10226913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1495	Open in IMG/M
3300010046\|Ga0126384_10316959	Not Available	1288	Open in IMG/M
3300010046\|Ga0126384_11094245	Not Available	730	Open in IMG/M
3300010046\|Ga0126384_12034193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300010046\|Ga0126384_12270949	Not Available	523	Open in IMG/M
3300010047\|Ga0126382_10434395	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300010047\|Ga0126382_10849223	Not Available	784	Open in IMG/M
3300010047\|Ga0126382_11455865	Not Available	628	Open in IMG/M
3300010358\|Ga0126370_10097141	Not Available	2027	Open in IMG/M
3300010358\|Ga0126370_10111854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1915	Open in IMG/M
3300010358\|Ga0126370_10112654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1910	Open in IMG/M
3300010358\|Ga0126370_10324065	Not Available	1233	Open in IMG/M
3300010358\|Ga0126370_10521988	Not Available	1008	Open in IMG/M
3300010358\|Ga0126370_11835301	Not Available	588	Open in IMG/M
3300010359\|Ga0126376_10068049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2593	Open in IMG/M
3300010359\|Ga0126376_10188491	Not Available	1696	Open in IMG/M
3300010360\|Ga0126372_10193944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1683	Open in IMG/M
3300010360\|Ga0126372_10716187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	979	Open in IMG/M
3300010360\|Ga0126372_11318498	Not Available	751	Open in IMG/M
3300010361\|Ga0126378_11220797	Not Available	849	Open in IMG/M
3300010361\|Ga0126378_11857533	All Organisms → cellular organisms → Bacteria → Proteobacteria	685	Open in IMG/M
3300010362\|Ga0126377_10367564	Not Available	1440	Open in IMG/M
3300010362\|Ga0126377_10774623	Not Available	1016	Open in IMG/M
3300010366\|Ga0126379_11782497	Not Available	720	Open in IMG/M
3300010366\|Ga0126379_11992178	Not Available	683	Open in IMG/M
3300010366\|Ga0126379_12119733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	664	Open in IMG/M
3300010376\|Ga0126381_100020618	All Organisms → cellular organisms → Bacteria → Proteobacteria	7702	Open in IMG/M
3300010376\|Ga0126381_101153260	Not Available	1120	Open in IMG/M
3300010398\|Ga0126383_10071477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2987	Open in IMG/M
3300010398\|Ga0126383_10093356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	2666	Open in IMG/M
3300010398\|Ga0126383_12734948	Not Available	576	Open in IMG/M
3300012948\|Ga0126375_11304074	Not Available	610	Open in IMG/M
3300012948\|Ga0126375_11357142	Not Available	600	Open in IMG/M
3300012948\|Ga0126375_12104961	Not Available	501	Open in IMG/M
3300012960\|Ga0164301_10859340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	700	Open in IMG/M
3300012971\|Ga0126369_10383296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1438	Open in IMG/M
3300012971\|Ga0126369_10463220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1319	Open in IMG/M
3300012971\|Ga0126369_10525123	Not Available	1245	Open in IMG/M
3300012971\|Ga0126369_10737230	Not Available	1064	Open in IMG/M
3300012971\|Ga0126369_12326709	Not Available	622	Open in IMG/M
3300015371\|Ga0132258_10133981	Not Available	5914	Open in IMG/M
3300016270\|Ga0182036_11171491	Not Available	638	Open in IMG/M
3300016319\|Ga0182033_10662952	All Organisms → cellular organisms → Bacteria → Proteobacteria	911	Open in IMG/M
3300016319\|Ga0182033_12221074	Not Available	500	Open in IMG/M
3300016341\|Ga0182035_10144895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1815	Open in IMG/M
3300016357\|Ga0182032_11730501	Not Available	545	Open in IMG/M
3300016445\|Ga0182038_10166557	Not Available	1701	Open in IMG/M
3300016445\|Ga0182038_10439199	Not Available	1102	Open in IMG/M
3300021178\|Ga0210408_10378040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1129	Open in IMG/M
3300021405\|Ga0210387_11252051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	643	Open in IMG/M
3300021432\|Ga0210384_10343209	Not Available	1345	Open in IMG/M
3300021478\|Ga0210402_10237960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1679	Open in IMG/M
3300021478\|Ga0210402_12015281	Not Available	503	Open in IMG/M
3300021560\|Ga0126371_10104593	All Organisms → cellular organisms → Bacteria → Proteobacteria	2827	Open in IMG/M
3300021560\|Ga0126371_13573589	Not Available	525	Open in IMG/M
3300027874\|Ga0209465_10072927	Not Available	1665	Open in IMG/M
3300027874\|Ga0209465_10340955	Not Available	751	Open in IMG/M
3300031573\|Ga0310915_10254640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1236	Open in IMG/M
3300031573\|Ga0310915_10396979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	979	Open in IMG/M
3300031719\|Ga0306917_10865623	Not Available	708	Open in IMG/M
3300031768\|Ga0318509_10464171	Not Available	708	Open in IMG/M
3300031771\|Ga0318546_10424803	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300031793\|Ga0318548_10368782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	705	Open in IMG/M
3300031846\|Ga0318512_10523873	Not Available	602	Open in IMG/M
3300031890\|Ga0306925_11289748	Not Available	726	Open in IMG/M
3300031890\|Ga0306925_11716789	Not Available	605	Open in IMG/M
3300031897\|Ga0318520_11085052	Not Available	507	Open in IMG/M
3300031910\|Ga0306923_10428504	All Organisms → cellular organisms → Bacteria → Proteobacteria	1503	Open in IMG/M
3300031910\|Ga0306923_10934022	Not Available	948	Open in IMG/M
3300031910\|Ga0306923_12223415	Not Available	549	Open in IMG/M
3300031912\|Ga0306921_10298910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1885	Open in IMG/M
3300031912\|Ga0306921_11282868	Not Available	811	Open in IMG/M
3300031941\|Ga0310912_11029596	Not Available	631	Open in IMG/M
3300031942\|Ga0310916_10226600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1570	Open in IMG/M
3300031942\|Ga0310916_11330166	Not Available	590	Open in IMG/M
3300031945\|Ga0310913_10775181	Not Available	677	Open in IMG/M
3300031954\|Ga0306926_10091074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3726	Open in IMG/M
3300031954\|Ga0306926_11093714	Not Available	943	Open in IMG/M
3300032001\|Ga0306922_10245733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1923	Open in IMG/M
3300032035\|Ga0310911_10203851	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300032066\|Ga0318514_10554853	Not Available	612	Open in IMG/M
3300032076\|Ga0306924_10394925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1584	Open in IMG/M
3300032261\|Ga0306920_100002832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21906	Open in IMG/M
3300032261\|Ga0306920_101344869	All Organisms → cellular organisms → Bacteria → Proteobacteria	1026	Open in IMG/M
3300033289\|Ga0310914_10268779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1535	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.88%
Host-Associated	Host-Associated	3.12%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.88%
Plants	Host-Associated → Plants	3.12%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.66%
Loam	Environmental → Terrestrial → Soil → Loam	24.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	24.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	40.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	24.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_100475502	3300004633	Tropical Forest Soil	MKIVVPAVVCLALTASLADQVTAAPLRNKKQAQRQHTMPKPPPRPAQGGSDYYENLLDKVPFGSERWWVIKQRRGGGGA*
Ga0066395_106717921	3300004633	Tropical Forest Soil	MKIVVPAVVSLALTASLTDQVSAAPLRNKKQAHRQHTMTKPPPRPPQGGSDYYENLLDKVPFGSERWWKIKQRRGGGGA*
Ga0066388_1000956854	3300005332	Tropical Forest Soil	MKIVVPTLVSLALTASLADQVTAAPLRNKKQAHRHTMIKPAPRPQQGGSDYYENLLDKVPFGSERWWIIKQKRGGGGA*
Ga0066388_1001236946	3300005332	Tropical Forest Soil	MRVGSSWLKTSSNIVVLAAVVLALAASIVGQVTAAPWRNKKQTHRQHTITKPPRRPTQEGGDYYEHILDKVPFGSQRWWNVYRQQHNRGGS*
Ga0066388_1002066923	3300005332	Tropical Forest Soil	MKIVVPALMSLALTASLADQVTAAPLRHKKQAHRQYTMTKPSPRPRQGGSDYFENVFDKVPFGSEGWWVIKQRRSGGGG*
Ga0066388_1010903314	3300005332	Tropical Forest Soil	MKILIHALVSAMIAASLAGSVIAAPSRSKKHPHRQHIMAKPTLRPAQGSGDYYEHLLNKVPFGSQRWWSIYHEQQGVPN*
Ga0066388_1013281082	3300005332	Tropical Forest Soil	MKIVVPGIVSLALTASLVDEVTAAPLRSKKQAHRQHTMTKSPPRSQLGGSDYYENLLDKVPFGAQRWWDIKQRRGGGGG*
Ga0066388_1016005692	3300005332	Tropical Forest Soil	MKIVVSAVLSLALAANLVGQVTAAPLKNKKQAHRQHTMTKPSHRPPQGGGDYYQHVLDKVPFGSRQWWSIYHEQHGEPN*
Ga0066388_1027091882	3300005332	Tropical Forest Soil	MKIVVPAVVSLALTASLADQVTAAPLRNKKQAHPQHTMPPPRPEQGGSNYYEQLLDKVPFGSERWWHIKQRKGGGGA*
Ga0066388_1027760252	3300005332	Tropical Forest Soil	MKIVVPAVVCLALTASLADHVTAAPLRNKKQAQRQHTMPKPPPRPAQGGSDYYENLLDKVPFGSERWWVIK
Ga0066388_1038303161	3300005332	Tropical Forest Soil	MKIVVPAVVSLALTASLTDQATAAPLRNKERAHRQHTMTKPPPRPQQGGNDYYENLLDKVPFGSERWWKIKQRRSGGGA*
Ga0066388_1040596782	3300005332	Tropical Forest Soil	MKIVVFAVVSLAILASLVGQVTAAPLRNKKQAHRQQPMAKPSHRPPQGDGNYYPHLLDKVPFGSQRWWSIYHEQHGEPN*
Ga0066388_1042971151	3300005332	Tropical Forest Soil	MKIVIPAVVSLALASLALAANLVGQVAAAPLKNKKHAHRQQTMTKPPHQPQQGGGDYYEHLLDKVPFGSQRWWDIYQQQQGRGGG*
Ga0066388_1046871251	3300005332	Tropical Forest Soil	MTMKIVVLAAVVLALAASLVGQVTAAPLRNKKQTHRQHTITKPPRRPTQGGVDYYEHVLDKVPFGSQRWWDIYRQQHNRGGS*
Ga0066388_1055888192	3300005332	Tropical Forest Soil	MKIVVPGMVSLALTAWLADEVTAAPSRNKKQAHRQQTMTKSPQSALGGSDYYENLLDKVPFGAQRWWDIKQRRGGEGG*
Ga0066388_1070967131	3300005332	Tropical Forest Soil	MKIVVPAVVCLALTASLADQVTAAPLRNKKQAQRQHTMPKPPPRPAQGGSDYYENLLDKVPFGSERWWVIK
Ga0066905_1003853022	3300005713	Tropical Forest Soil	MKIVVLAVVSLALATSLVGQVTAAPLRNKKQTHRQHTATKPPRQPKQGGGGYYEHLLDKVPFGSQRWWDIYRQQHNRGGP*
Ga0066905_1004589002	3300005713	Tropical Forest Soil	MKIVVSAVISLALAANLVGQVTAAPLRNKKQAYKQHTMTKPSHQPPQGGGDYYQHLLDKVPFGSQRWWRIYHEQHGEPN*
Ga0066905_1016691281	3300005713	Tropical Forest Soil	RKNMQIVIPVVSLALVASLVGGVSAAPVKNKKQAHRQHTMTKPARRPPQAGFDYYEHLLNKVPFGSQRWWTIYNEQHGEPN*
Ga0066903_1001994043	3300005764	Tropical Forest Soil	MPAGPGRTPNIGLAPTPVWQKCMKIVLCAMVSLALAASLVGQVVAAPVRHKKQAYRQRTMTTPPRRAQQGGGDYYEHLLDKVPFGSRRWWDIYQEQHGRGGG*
Ga0066903_1003757073	3300005764	Tropical Forest Soil	MKIVVLAVVSLALAANLVGQVTAAPLRNKKQAHRQHAMTKPSDRPAQRAGDYYEHLLDKVPFGSQRWWRIYHEQHGEPN*
Ga0066903_1006413664	3300005764	Tropical Forest Soil	MKIVVPAVVSLALTASLADQVTAASLRNKKQAHRQHTMTKPPPRPQQGGSDYYEQLLDKVPFGSERWWHIKQRKGGGGS*
Ga0066903_1007493064	3300005764	Tropical Forest Soil	MKIVVPAVVVSLALTANLADQATATPLRTKKQADRQHNRTKPAPRPHPGGSDYYQNLLDKVPFGSERWWVIKQRRGGGGA*
Ga0066903_1008447732	3300005764	Tropical Forest Soil	MKIVVPGMVSLALMASLADEVTAAPSRNKKQAHRQYTMTKSPPRSQLGGSDYYENVLDKVPFGAQRWWDIKQRRGGGGG*
Ga0066903_1009884532	3300005764	Tropical Forest Soil	MKIVVPAVVSLALTASLAEQVAAAPLRNKKQAHRQHTMTKPPPRPQQGGGDYYEQLLDKQPFGSERWWKIKQRRGGGGS*
Ga0066903_1012923762	3300005764	Tropical Forest Soil	MKIVVPAVVSLALTASLADQVTAAPLRNKKQAHRQHTMTKPPPRPQQGGSDYYEQLLDKVPFGSERWWHIKQRKG
Ga0066903_1024703382	3300005764	Tropical Forest Soil	MKIVVPAVVSLVLTASLADQVTAASLRNKKQAQRQHTMTKSPPRPQQGGSDYYEQLLGKVPFGSERWWHIKQRKGGGGA*
Ga0066903_1038547793	3300005764	Tropical Forest Soil	MKIVVSAVISLALAANLVGQVTAAPLRNKKQAHRQHTMAKPSHRPPQGGGDYYQHVLDKVPFGSRQWWSIY
Ga0066903_1071190601	3300005764	Tropical Forest Soil	MKIVVLAAVVLALAASLVGQVTAAPLRNKKQTHRQHTITKPPRRPTQGGVDYYEHVLDKVPFGSQRWWD
Ga0075433_112810121	3300006852	Populus Rhizosphere	MKIIVSAMVSLALMASLADQVAAAPLGNKKQAHRRTMTKPPPRPQQGGSDYYENVLDKVPFGTQRWWAIKQRRSGGGG*
Ga0075434_1000731674	3300006871	Populus Rhizosphere	MKIVVSAAVSLALAANLVGQVTAAPLRNKKQAHRQHTMTKPSHRPPQGGGDYYQHLLDKVPFGSQRWWSVYHEQHGEPN*
Ga0075434_1022880491	3300006871	Populus Rhizosphere	MKIIVAAVSLALVASLADQVTAAPHRNKKRVHRQHMMTKPSNRPSQGGGDYYEHLLNKVPFGSQRWWTIYNEQHGEPN*
Ga0126374_100658563	3300009792	Tropical Forest Soil	MQIVAPVVSLALVASLVSEVSAAPVKNKKQAHRQHSMTRPAQRPPQGGGDYYEHLLNKVPFGSRRWWTIYNEQHGEPN*
Ga0126374_101079212	3300009792	Tropical Forest Soil	MKIVASAMVSLALTASLADRVTAAPLRNKKQAHRQHTHTMTKPPPRPEQGGNDYYENVLDKVPFGTQRWWTIKQRRSGGGG*
Ga0126374_101710952	3300009792	Tropical Forest Soil	MKFVVPAVVSLALTASLADQVTAAPLRNKKQAQRQHMMTKPPPRPAQGGSDYYENLLDKVPFGSERWWVIKQRRGGGGA*
Ga0126374_104397122	3300009792	Tropical Forest Soil	MKIVVPALMSLALTASLADQVTAAPLRNKKQAHRQYTMTKPPPRPQQGGSDYFENVFDKVPFGGEGWWVIKQRRSGGGG*
Ga0126374_107352471	3300009792	Tropical Forest Soil	MKIVVPAVVCLALTASLADHVTAAPLRNKKQAQRQHTMPKPPPRPAQGGSDYYENLLDKVPFGSERWWVIKQRRGGGGA*
Ga0126374_110395331	3300009792	Tropical Forest Soil	KSMKIVVSAVLSLALAANLVGQVTAAPLKNKKQAHRQHTMTKPSHRPPQGGGDYYQHVLDKVPFGSRQWWSIYHEQHGEPN*
Ga0126380_102126732	3300010043	Tropical Forest Soil	MKIVVPALMSLALTTSLADQVTAAPLRNKKQAHRQYTMTKPPPRPQQGGSDYFENVFDKVPFGGERWWVIKQRRSGGGG*
Ga0126380_102924831	3300010043	Tropical Forest Soil	MRIVVPVVSLALVASLVSGVSAAAVKNKKQAHRQHTMTRPAQRPPQGGGDYYEHLLNKVPFGSQRWWTIYNEQHGEPN*
Ga0126380_103789172	3300010043	Tropical Forest Soil	MKIVVPSIVSLALTASLVDEVTAAPLRSKKQAHRQHTMTKSPPRSQLGGSDYYENLLDKVPFGAQRWWDIKQRRGGGGG*
Ga0126384_100967762	3300010046	Tropical Forest Soil	MKIVVTGMVSLALTASLADEVTAAPLRNKKQAHRQHTMTKPPLRPQQGGSEYYENILDKVPFGTQRWWNIKQRRGGGGG*
Ga0126384_101503522	3300010046	Tropical Forest Soil	MQIVAPVVSLALVASLVSEVSAAPVKNKKQPHRQHSMTRPAQRPPQGGGDYYEHLLNKVPFGSQRWWTIYNEQHGEPN*
Ga0126384_102269131	3300010046	Tropical Forest Soil	MKIVVPAVVSLALTASLADQVTAAPLRNKKQAHRQHTMTKPPPRRQQGGSDYYENLFDKVPFGS
Ga0126384_103169592	3300010046	Tropical Forest Soil	MKIVVSAVISLALAANLVGQVTAAPLRNKKQAYKQHTMTKPSYQPPQGGGDYYQHLLDKVPFGSQRWWRIYHEQHGEPN*
Ga0126384_110942451	3300010046	Tropical Forest Soil	MKIVVPAVVCLALTSSLADQVTAAPLRNKKQAQRQHTMPKPPPRPAQGGSDYYENLLNKVPFGSERWWVIKQRRGGGGA*
Ga0126384_120341931	3300010046	Tropical Forest Soil	GQLLRADQLGTTTFVGRKSMKIVVSAVVSLALAANLVGQVTAAPLRNKKQTHRQHAMTKPSDRPPQRGGDYYEHLLDKVPFGSQRWWRIYHEQHGEPN*
Ga0126384_122709491	3300010046	Tropical Forest Soil	MKIVVPALMSLALTASLADQVTAAPLSHKKQAHLQYTMTKPSPRPRQGGSDYFENVFDKVPFGGEEWWVIKQRRSGGGG*
Ga0126382_104343952	3300010047	Tropical Forest Soil	MKIVVPGLVSLVLTASVADEVTAAALRNKKQAHRQHTMTKSPPRSQLGGSDYYENLLDKVPFGAQRWWDIKQRRGGGGG*
Ga0126382_108492231	3300010047	Tropical Forest Soil	MKIVVPALMSLALTASLADQVTAAPLRNKKQAHRQYTMTKPPPRPQQGGSDYFENVFDKVPFGGERWWVIKQRRSGGGG*
Ga0126382_114558651	3300010047	Tropical Forest Soil	MKIVAPALVSLALTASLADQVTAAPLRNKKEAHRQHTMTKPAPRPQQGGSDYHENLLDKVPFGSERWWVIKQRRGGGGA*
Ga0126370_100971412	3300010358	Tropical Forest Soil	MRVDSSWLKTSSNIVVLAAVVLALAASIVGQVTAAPWRNKKQTHRQHTITKPPRRPTQEGGDYYEHILDKVPFGSQRWWNVYRQQHNRGGS*
Ga0126370_101118541	3300010358	Tropical Forest Soil	MVVWRTSMKIVVLAVVSLALAANLVGQVTAAPLRNKKQAHRQHAMTKPSDRPAQRAGDYYEHLLDKVPFGSQRWWRIYHEQHGEPN*
Ga0126370_101126543	3300010358	Tropical Forest Soil	MKIVVPALISLALTASLADQVTAASLRHKKQAHRQYTMTKPPPRPQQGGSDYFENVFDKVPFGGEGWWVIKQRRSGGGG*
Ga0126370_103240652	3300010358	Tropical Forest Soil	MKIVVPAVVVSLALTANLADQATATPLRTKKQAHRQHTMTKPPPRPPQGGSDYYENLLDKVPFGSERWWVIKQRRGGGGA*
Ga0126370_105219881	3300010358	Tropical Forest Soil	MKIVVPALMSLALTASLADQVTAAPLRHKKQAHRQYTMTKPSPRPRQGGSDYFENVFDKVPFGSEGWWVIKQRR
Ga0126370_118353011	3300010358	Tropical Forest Soil	MQIVVPVVSLALVSSLVSGVSAAPVKNKKQAHRQHTMTRPAQRPPQGGSDYYEHLLNKVPFGSQRWWTIYNEQHGEPN*
Ga0126376_100680492	3300010359	Tropical Forest Soil	MKIVVLAEVSLALTASLADQVTAAPLRNKKQAHRQHTMTKPPPRPQQGGSDYYEQLLDKVPFGSERWWHIKQRKGGGGS*
Ga0126376_101884913	3300010359	Tropical Forest Soil	MKIVVPAVVCLALTSSLADQVTAAPLRNKKQAQRQHTMPKPPPRPAQGGSDYYENLLDKVPFGSERWWVIKQRRGGGGA*
Ga0126372_101939443	3300010360	Tropical Forest Soil	MRVGSSWLKTSSNIVVLAAVVLALAASIVGQVTAAPWRNKKQTHRQHTITKPPRRPTQEGGDYYEHILDKVPFGSQRWWDVYRQQHNRGGS*
Ga0126372_107161871	3300010360	Tropical Forest Soil	MKIVVPAVVSLALAANLVGQVTAAPLRNKKQAHRQHAMTKPSDRPAQRAGDYYEHLLDKVPFGSQRWWRIYHEQHGEPN*
Ga0126372_113184981	3300010360	Tropical Forest Soil	MKIVAPAVVCLALTASLADQVTAAPLRNKKQAQRQHTMPKPPPRPAQGGSDYYENLLNKVPFGSERWWVIKHRRGGGGA*
Ga0126378_112207971	3300010361	Tropical Forest Soil	MKIVVPAVVSLVLTASLADQVTAASLRNKKQAHRQHTMTKPPPRPQQGGSDYYEQLLDKVPFGSERWW
Ga0126378_118575332	3300010361	Tropical Forest Soil	MKIVVPALMSLALTASLADQVTAAPLRNKKQAHRQYTMTKPPLRPQQGGSDYFENVFDKVPFGGEGWWVIKQRRSGGGG*
Ga0126377_103675641	3300010362	Tropical Forest Soil	MKIVVFAMVSLALTASLADQVAAAAFRNKKQAHGLHRMTKPPPRPQQGGSDYYENVFDKVPFGTERWWNIKQRRSGGGG*
Ga0126377_107746231	3300010362	Tropical Forest Soil	IMQIAVRVVSLALVASLASGVSAAPVKNKQQAHRQHTMTRPAQRPPQGGGDYYEHLLNKVPFGSQRWWTIYNEQHGEPN*
Ga0126379_117824971	3300010366	Tropical Forest Soil	MKIVVPAVVCLALTASLADQVTAAPLRNKKQAQRQHTMPKPTPRPAQGGSDYYENLLDKVPFGSERWWVIKQRRGGGGA*
Ga0126379_119921781	3300010366	Tropical Forest Soil	MKILVSAVLSLALAANLVGQVTAAPLRNKKQAHRQHTMTKPSHRPPQGGGDYYQHILDKVPFGSRQWWSIYHEQHGEPN*
Ga0126379_121197332	3300010366	Tropical Forest Soil	PVWQKCMKIVLCAMVSLALAASLVGQVAAAPLRHKKQAYRQRTMTTPPRRAQQGGGDYYEHLLDKVPFGSRRWWDIYQEQHGRGGG*
Ga0126381_1000206181	3300010376	Tropical Forest Soil	MKIVVPALISLALTASLADQVTAAPLRNKKQAHRQYTMTKPPPRPQQGGSDYFENVFDKVPFGGEGWWVIKQRRSGGGG*
Ga0126381_1011532602	3300010376	Tropical Forest Soil	MKIVVPAVVCLALTSSLADQVTAAPLRNKKQAQRQHTMPKPPPRPAQGGSDYYENLLNKVPFGSERWWVIKHRRGGGGA*
Ga0126383_100714773	3300010398	Tropical Forest Soil	MKIVVPAVVSLVLTASLADQVTAASLRNKKQAQRQHTMTKSPPRPQQGGSDYYEQLLDKVPFGSERWWHIKQRKGGGGA*
Ga0126383_100933566	3300010398	Tropical Forest Soil	CMKIVLCAMVSLALAASLVGQVAAAPVRHKKQAYRQRTMTTPPRRAQQGGGDYYEHLLDKVPFGSRRWWDIYQEQHGRGGG*
Ga0126383_127349482	3300010398	Tropical Forest Soil	FAGRKSMKIVVSAVISLALAANLVGQVTAAPLRNKKQAYKQHTMTKPSHRPPQGGGDYYQHVLDKVPFGSRQWWSIYHEQHGEPN*
Ga0126375_113040741	3300012948	Tropical Forest Soil	MKIVVPAVVCLALTASLADQVTAAPLRNKKQAQRQHTMPKPPPRPAQGGSDYYENLLNKVPFGSERWWVIKQRRGGGGA*
Ga0126375_113571421	3300012948	Tropical Forest Soil	IVVPVVSLALVASLVSGVSAAAVKNKKQAHRQHTMTRPAQRPPQGGGDYYEHLLNKVPFGSQRWWTIYNEQHGEPN*
Ga0126375_121049611	3300012948	Tropical Forest Soil	MKIVASAMVSLALTASLADRVAAAPLRNKKQAHRQHTHTMTKPPPRPEQGGNDYYENVLDKVPFGTQRWWTIKQRRSGGGG*
Ga0164301_108593402	3300012960	Soil	MKIVIPTLVSLAIAASLIGQVTAAPLRNKKQADRQHMMTKPPRRPKQGGGDYYEHLLDKVPFGSRRWWDIYEEQHGGRGG*
Ga0126369_103832962	3300012971	Tropical Forest Soil	MKIVVPALMSLALTASLADQVTAAPLRHKKQAHRQYTMTKPSPRPRQGGSDYFENVFDKVPFGSEGWWVIKQRRSGG
Ga0126369_104632203	3300012971	Tropical Forest Soil	MRVGSSWLKTSSNIVVLAAVVLALAASIVGQVTAAPWRNKKQTHRQHTITKPPRRPTQEGGDYYEHILDKVPFGSQRWWNVYR
Ga0126369_105251232	3300012971	Tropical Forest Soil	MKIVVPAVVCLALTASLADQVTAAPLRNKKQAQRQHAMPKPPPRPAQGGSDYYENLLDKVPFGSERWWVIKQRRGGGGA*
Ga0126369_107372301	3300012971	Tropical Forest Soil	NSTTVVWRTSMKIVVLAVVSLALAANLVGQVTAAPLRNKKQAHRQHAMTKPSDRPAQRAGDYYEHLLDKVPFGSQRWWRIYHEQHGEPN*
Ga0126369_123267091	3300012971	Tropical Forest Soil	MKIVVPAVVSLALTASLAEQVAAAPLRNKKQAHRQHTMTKPPPRPPQGGSDYYENLLDKVPFGSERWWKIKQRRGGGGS*
Ga0132258_101339818	3300015371	Arabidopsis Rhizosphere	MAVAATAWSNSMKMVVAVVSLALLASLANQVTAAQPRNKKRAHRQHAITKPSSRPSQGGGDYYEHLLNKVPFGSQKWWTIYNEQHGEPN*
Ga0182036_111714911	3300016270	Soil	MKIVVPAMVSLVLTASLADQVTAASLRNKKQAQRQHTMTKSPPRPQQGGSDYYEQLLDKVPFGSERWWHIKQRKGGGGA
Ga0182033_106629521	3300016319	Soil	MKIVVSAVLSLALAANLVGQVTAAPLRNKKQAHRQHTMTKPSHRPPQGGGDYYQHLTDKVPFGSRRW
Ga0182033_122210741	3300016319	Soil	VLAATLVDQVIAAPLKNKKQAHRQPTMTMPPRRSQQGGSDYHEQLLDKVPFGSRQWWDIYQRLRPGTGGG
Ga0182035_101448953	3300016341	Soil	MKIVVRAVVSLALTASLADQVTAAPLRNKKQAHRQHTTTKPPRPQQGGSDYYEQLLDKVPFGSERWWHIKQ
Ga0182032_117305011	3300016357	Soil	MKIIVPAVVLLAFTASLADQVTAAPLRNKKQAHRQHTTTKPPRPQQGGSDYYEQLLDKVPFGSERWWHIKQKKGGGGA
Ga0182038_101665572	3300016445	Soil	MKIVVSAVLSLALAANLVGQVTAAPLRNKKQAHRQHTMTKASHRPPQGGGDYYQHLTDKVPFGSRRWWSIYHEQHGEPN
Ga0182038_104391991	3300016445	Soil	MCLLTFVSLVLAATLVGQVIAAPLKNKKQAHRQHAMTTSPRRSQQGGSDYHEQLLDKVPFGSRQWWDIYQRLRPGTGGG
Ga0210408_103780403	3300021178	Soil	VNGDRCNGWSNSMKMVVAIVSLALVASLANQVTASPLRNKRQAHRQHTMTKPSSRPSQGGGDYYEHLLNKVPFGSKRWWTIYNEQHGEPN
Ga0210387_112520512	3300021405	Soil	MKMVVAIVSLALVASLANQVTASPLRNKRQAHRQHTMTKPSSRPSQGGGDYYEHLLNKVPFGSKRWW
Ga0210384_103432092	3300021432	Soil	MKMVVAIVSLALVASLANQVTASPLRNKRQAHRQHTMTKPSSRPSQGGGDYYEHLLNKVPFGSKRWWTIYNEQHGEPN
Ga0210402_102379603	3300021478	Soil	MGRQVNGDRCNGWSNSMKMVVAIVSLALVASLANQVTASPLRNKRQAHRQHTMTKPSSRPSQGGGDYYEHLLNKVPF
Ga0210402_120152811	3300021478	Soil	MKIVVPAVVSLALTANLADQVTAAPLRNKKQAHRQHTMTKPPPRPQQGGSDYYENLLDKVPFGSERWWLIKQRRGGGGM
Ga0126371_101045933	3300021560	Tropical Forest Soil	MKIVVPALMSLALTASLADQVTAAPLRHKKQAHRQYTMTKPSPRPRQGGSDYFENVFDKVPFGSEGWWVIKQRRSGGGG
Ga0126371_135735891	3300021560	Tropical Forest Soil	MKIVVPAVVSLALTASLTDQVSAAPLRNKKQAHPQHTMPPPRPEQGGSNYYEQLLDKVPFGSERWWHIKQRKGGGGA
Ga0209465_100729272	3300027874	Tropical Forest Soil	MKIVVPAVVCLALTASLADQVTAAPLRNKKQAQRQHTMPKPTPRPAQGGSDYYENLLDKVPFGSERWWVIKQRRGGGGA
Ga0209465_103409551	3300027874	Tropical Forest Soil	MKIVVPAVVSLALTASLTDQVSAAPLRNKKQAHRQHTMTKPPPRPQQGGSDYYEQLLDKVPFGSERWWHIKQRKGGGGS
Ga0310915_102546402	3300031573	Soil	MKIVVLAAVVLALAASLVGQVTAAPLRNKKQTQRQHTITKPPRQPTQGGGGYYEHILDKVPFGSQRWWDIYRQQHNRGGP
Ga0310915_103969791	3300031573	Soil	LALTVWLADEVSAAPSRNKKQAHRQHTMTKSPQSQLGGSDYYENVLDKVPFGAQRWWDIKQRRSGGGG
Ga0306917_108656231	3300031719	Soil	MLPPKRNPPAMKIVVPGMVSLALTVWLADEVSAAPSRNKKQAHRQHTMTKSPQSQPGGSDYYENVLDKVPFGAQRWWDIKQRRSGGGG
Ga0318509_104641711	3300031768	Soil	MKIVVPGMVSLALTVWLADEVSAAPSRNKKQAHRQHTMTKSPQSQLGGSDYYENLLDKVPFGAQRWWDIKQRRSGGGG
Ga0318546_104248032	3300031771	Soil	MLPLKRNPPAMKIVVPGMVSLALTVWLADEVSAAPSRNKKQAHRQHTMTKSPQSQLGGSDYYENVLDKVPFGAQRWWDIKQRRSGGGG
Ga0318548_103687822	3300031793	Soil	GMVSLALTVWLADEVSAAPSRNKKQAHRQHTMTKSPQSQLGGSDYYENVLDKVPFGAQRWWDIKQRRSGGGG
Ga0318512_105238731	3300031846	Soil	MKIVVLAAVVLALAASLVGQVTAAPLRNKKQTQRQHTITKPPRQPTQGGGGYYEHILDKVPFGSQRW
Ga0306925_112897482	3300031890	Soil	MLPPKRNPPAMKIVVPGMVSLALTVWLADEVSAAPSRNKKQAHRQHTMTKSPQSQLGGSDYYENLLDKVPFGAQRWWDIKQRRSGGGG
Ga0306925_117167891	3300031890	Soil	MCLLTFVSLVLAATLVDQVIAAPLKNKKQAHRQHTMTTPPRRSQQGGSDYHEQLLDKVPFGSRQWWDIYQRLRPGTGGG
Ga0318520_110850522	3300031897	Soil	MKIVVLAAVVLALAASLVGQVTAAPLRNKKQTQRQHTITKPPRQPTQGGGGYYEHILDKVPFGSQR
Ga0306923_104285042	3300031910	Soil	MLPPKRNPPAMKIVVPGMVSLALTVWLADEVSAAPSRNKKQAHRQHTMTKSPQSQLGGSDYYENVLDKVPFGAQRWWDIKQRRSGGGG
Ga0306923_109340222	3300031910	Soil	MKIVVLAAVALALAASLVGQVTAAPLRNKKQTHRQHTITKPPRQPTQGGGGYYEHILDKVPFGSQRWWDIYRQQHNRGGP
Ga0306923_122234151	3300031910	Soil	MKIVVSAVLSLALAANLVGQVTAAPLRNKKQAHRQHTMTKPSHRPPQGGGDYYQHLTDKVPFGSRRWWSIYHEQHGEPN
Ga0306921_102989102	3300031912	Soil	MRRVGSSWLKTSSNIVVLAAVVLALAASLVGQVTAAPLRNKKQTQRQHTITKPPRQPTQGGGGYYEHILDKVPFGSQRWWDIYRQQHNRGGP
Ga0306921_112828682	3300031912	Soil	MKIVVPAVVSLVLTASLADQVTAASLRNKKQAQRQHTMTKSPPRPQQGGSDYYEQLLDKVPFGSERWWHIKQRKGGGGA
Ga0310912_110295961	3300031941	Soil	MKIVVLAAVVLALAASLVGQVTAAPLRNKKQTQRQHTITKPPRQPTQGGGGYYEHILDKVPFGSQRWWDIY
Ga0310916_102266002	3300031942	Soil	MKIVVLAAVVLALAASLVGQVTAAPLRNKKQTHRQHTITKPPRQPTQGGGGYYEHILDKVPFGSQRWWDIYRQQHNRGGP
Ga0310916_113301662	3300031942	Soil	TVWLADEVSAAPSRNKKQAHRQHTMTKSPQSQLGGSDYYENVLDKVPFGAQRWWDIKQRRSGGGG
Ga0310913_107751812	3300031945	Soil	MRIVVPGMVSLALTVWLADEVSAAPSRNKKQAHRQHTMTKSPQSQLGGSDYYENLLDKVPFGAQRWWDIKQRRSGGG
Ga0306926_100910742	3300031954	Soil	MKIVVPGMVSLALTVWLADEVSAAPSRNKKQAHRQHTMTKSPQSQLGGSDYYENVLDKVPFGAQRWWDIKQRRSGGGG
Ga0306926_110937142	3300031954	Soil	MKIVVRAVVSLALTASLADQVTAAPLRNKKQAHRQHTTTKPPRPQQGGSDYYEQLLDKVPFGSERWWHIKQRKGGGGA
Ga0306922_102457332	3300032001	Soil	MRIVVPGMVSLALTVWLADEVSAAPSRNKKQAHRQHTMTKSPQSQLGGSDYYENVLDKVPFGAQRWWDIKQRRSGGGG
Ga0310911_102038512	3300032035	Soil	MLPPKRNPPAMKIVVPGMVSLALTVWLADEVSAAPSRNKKQAHRQHTMTKSPQSQLGGSDYYENVLDKVPFGAQRWWNIKQRRSGGGG
Ga0318514_105548532	3300032066	Soil	MRIVVPGMVSLALTVWLADEVSAAPSRNKKQAHRQHTMTKSPQSQLGGSDYYENLLDKVPFGAQRWWDIKQRRSGGGG
Ga0306924_103949252	3300032076	Soil	MRRVGSSWLKTSSNIVVLAAVVLALAASLVGQVTAAPWRNKKLTYRQHTITKPPRRPTQGGGDYYEHILDKVPFGSQRWWDVYRQQHNRGGP
Ga0306920_1000028329	3300032261	Soil	MKIVIRGVVSLVLAASLAGQVTAAPLRNKKQAHRQHTMTKPPRQPQQGGGDYYEHLLDKVPFGSQRWWDIYQDQHSRG
Ga0306920_1013448692	3300032261	Soil	MKIVVRAVVSLALTASLADQVTAAPLRNKKQAHRQHTTTKPPRPQQGGSDYYEQLLDKVPFGSERWWHIKQKKGGGGA
Ga0310914_102687792	3300033289	Soil	MKIVVLAAVVLALAASVVGQVTAAPLRNKKQTQRQHTITKPPRQPTQGGGGYYEHILDKVPFGSQRWWDIYRQQHNRGGP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F064463

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences