Metagenome Family F064531

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F064531
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	70 residues
Representative Sequence	MKSTKLIGSLVILFASFVGCTAAPDRILLKEQGDNNRCHMKIETYGDPAMPTEREVVDYYGPCDERPSKK
Number of Associated Samples	113
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.34 %
% of genes near scaffold ends (potentially truncated)	31.25 %
% of genes from short scaffolds (< 2000 bps)	89.84 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (81.250 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.281 % of family members)
Environment Ontology (ENVO)	Unclassified (33.594 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (34.375 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 17.35% β-sheet: 21.43% Coil/Unstructured: 61.22%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF09084	NMT1	2.34
PF03404	Mo-co_dimer	2.34
PF00857	Isochorismatase	2.34
PF03401	TctC	1.56
PF00072	Response_reg	1.56
PF05532	CsbD	1.56
PF00004	AAA	1.56
PF04909	Amidohydro_2	1.56
PF00425	Chorismate_bind	0.78
PF00106	adh_short	0.78
PF04255	DUF433	0.78
PF09680	YjcZ_2	0.78
PF00578	AhpC-TSA	0.78
PF07681	DoxX	0.78
PF04972	BON	0.78
PF01694	Rhomboid	0.78
PF05726	Pirin_C	0.78
PF08085	Entericidin	0.78
PF02776	TPP_enzyme_N	0.78
PF00999	Na_H_Exchanger	0.78
PF01252	Peptidase_A8	0.78
PF02678	Pirin	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	2.34
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	2.34
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.34
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	2.34
COG0597	Lipoprotein signal peptidase	Cell wall/membrane/envelope biogenesis [M]	1.56
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	1.56
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.56
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	1.56
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.78
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.78
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.78
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.78
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.78
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.78
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.78
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.78
COG5510	Predicted small secreted protein	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.25 %
Unclassified	root	N/A	18.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.25 %
Unclassified	root	N/A	18.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.25 %
Unclassified	root	N/A	18.75 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	64.06 %
Unclassified	root	N/A	18.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.34 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	57.81 %
Unclassified	root	N/A	18.75 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.56 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	1.56 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	57.81 %
Unclassified	root	N/A	18.75 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	56.25 %
Unclassified	root	N/A	18.75 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.78 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	54.69 %
Unclassified	root	N/A	18.75 %
Deltaproteobacteria bacterium GWA2_57_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_57_13	1.56 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.78 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	54.69 %
Unclassified	root	N/A	18.75 %
Deltaproteobacteria bacterium GWA2_57_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_57_13	1.56 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.78 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2001200001\|2001323051	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1202	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0609420	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	862	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11056339	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1226	Open in IMG/M
3300000559\|F14TC_101820501	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	674	Open in IMG/M
3300000956\|JGI10216J12902_110058892	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	670	Open in IMG/M
3300000956\|JGI10216J12902_114403355	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300000956\|JGI10216J12902_118893606	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	588	Open in IMG/M
3300004019\|Ga0055439_10115944	All Organisms → cellular organisms → Bacteria → Proteobacteria	807	Open in IMG/M
3300004022\|Ga0055432_10194217	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	581	Open in IMG/M
3300004114\|Ga0062593_100398255	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1229	Open in IMG/M
3300004114\|Ga0062593_101716888	Not Available	686	Open in IMG/M
3300004157\|Ga0062590_102732685	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	526	Open in IMG/M
3300004157\|Ga0062590_102847938	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300004463\|Ga0063356_100363373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1838	Open in IMG/M
3300004463\|Ga0063356_102601741	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300004463\|Ga0063356_102776211	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	754	Open in IMG/M
3300004463\|Ga0063356_103512123	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	675	Open in IMG/M
3300005178\|Ga0066688_10645393	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	678	Open in IMG/M
3300005186\|Ga0066676_10027588	All Organisms → cellular organisms → Bacteria	3048	Open in IMG/M
3300005277\|Ga0065716_1001178	Not Available	528	Open in IMG/M
3300005289\|Ga0065704_10781645	Not Available	531	Open in IMG/M
3300005294\|Ga0065705_10141670	All Organisms → cellular organisms → Bacteria	2136	Open in IMG/M
3300005330\|Ga0070690_101664029	Not Available	518	Open in IMG/M
3300005441\|Ga0070700_101056355	Not Available	671	Open in IMG/M
3300005459\|Ga0068867_101454747	Not Available	637	Open in IMG/M
3300005467\|Ga0070706_101494256	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	617	Open in IMG/M
3300005471\|Ga0070698_101729922	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	578	Open in IMG/M
3300005507\|Ga0074259_10309169	Not Available	511	Open in IMG/M
3300005546\|Ga0070696_100449832	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1016	Open in IMG/M
3300005547\|Ga0070693_101043845	Not Available	620	Open in IMG/M
3300006034\|Ga0066656_10118726	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1625	Open in IMG/M
3300006800\|Ga0066660_10441875	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1085	Open in IMG/M
3300006847\|Ga0075431_100629271	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300006853\|Ga0075420_100192599	Not Available	1782	Open in IMG/M
3300006881\|Ga0068865_101143861	Not Available	687	Open in IMG/M
3300006894\|Ga0079215_11128800	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	590	Open in IMG/M
3300006918\|Ga0079216_10601809	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300007004\|Ga0079218_11046520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	824	Open in IMG/M
3300009078\|Ga0105106_10090705	All Organisms → cellular organisms → Bacteria → Proteobacteria	2249	Open in IMG/M
3300009100\|Ga0075418_11953067	Not Available	639	Open in IMG/M
3300009137\|Ga0066709_103716973	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	554	Open in IMG/M
3300009167\|Ga0113563_10527550	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1293	Open in IMG/M
3300009609\|Ga0105347_1000957	All Organisms → cellular organisms → Bacteria → Proteobacteria	12939	Open in IMG/M
3300009609\|Ga0105347_1017239	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2461	Open in IMG/M
3300009678\|Ga0105252_10134210	Not Available	1020	Open in IMG/M
3300010042\|Ga0126314_11334360	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	538	Open in IMG/M
3300010304\|Ga0134088_10061432	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1735	Open in IMG/M
3300010400\|Ga0134122_12119147	Not Available	604	Open in IMG/M
3300010403\|Ga0134123_11970982	Not Available	642	Open in IMG/M
3300011398\|Ga0137348_1100117	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	502	Open in IMG/M
3300011435\|Ga0137426_1261237	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300012198\|Ga0137364_10219221	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300012208\|Ga0137376_10329286	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1326	Open in IMG/M
3300012227\|Ga0137449_1139383	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M
3300012349\|Ga0137387_10370891	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1037	Open in IMG/M
3300012354\|Ga0137366_10134889	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1861	Open in IMG/M
3300012501\|Ga0157351_1002119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1353	Open in IMG/M
3300012922\|Ga0137394_10946387	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	717	Open in IMG/M
3300012930\|Ga0137407_10424925	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1233	Open in IMG/M
3300012957\|Ga0164303_10681193	Not Available	690	Open in IMG/M
3300013297\|Ga0157378_10226637	Not Available	1779	Open in IMG/M
3300014871\|Ga0180095_1089169	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	571	Open in IMG/M
3300014882\|Ga0180069_1172987	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	526	Open in IMG/M
3300015257\|Ga0180067_1021548	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300015373\|Ga0132257_101349008	Not Available	906	Open in IMG/M
3300015374\|Ga0132255_101444924	Not Available	1040	Open in IMG/M
3300017997\|Ga0184610_1183877	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	695	Open in IMG/M
3300018000\|Ga0184604_10064891	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1049	Open in IMG/M
3300018052\|Ga0184638_1035207	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1811	Open in IMG/M
3300018053\|Ga0184626_10008791	All Organisms → cellular organisms → Bacteria	3926	Open in IMG/M
3300018056\|Ga0184623_10052431	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300018061\|Ga0184619_10442085	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	581	Open in IMG/M
3300018076\|Ga0184609_10044176	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1882	Open in IMG/M
3300018083\|Ga0184628_10006110	All Organisms → cellular organisms → Bacteria	5769	Open in IMG/M
3300018084\|Ga0184629_10506041	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	628	Open in IMG/M
3300018422\|Ga0190265_10298017	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1681	Open in IMG/M
3300018422\|Ga0190265_10520295	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300018422\|Ga0190265_11968369	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	690	Open in IMG/M
3300018422\|Ga0190265_12920897	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	571	Open in IMG/M
3300018429\|Ga0190272_11407259	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	702	Open in IMG/M
3300018433\|Ga0066667_10236471	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300018469\|Ga0190270_11360284	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	755	Open in IMG/M
3300018476\|Ga0190274_11029089	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	899	Open in IMG/M
3300018481\|Ga0190271_11524989	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	785	Open in IMG/M
3300018482\|Ga0066669_10235058	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1435	Open in IMG/M
3300019377\|Ga0190264_11372099	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	603	Open in IMG/M
3300019878\|Ga0193715_1060412	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	806	Open in IMG/M
3300019885\|Ga0193747_1065091	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	901	Open in IMG/M
3300019889\|Ga0193743_1029791	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2635	Open in IMG/M
3300020060\|Ga0193717_1028183	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2239	Open in IMG/M
3300021073\|Ga0210378_10046488	All Organisms → cellular organisms → Bacteria → Proteobacteria	1713	Open in IMG/M
3300021363\|Ga0193699_10131205	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300021418\|Ga0193695_1040468	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1009	Open in IMG/M
3300025921\|Ga0207652_10382245	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1271	Open in IMG/M
3300025930\|Ga0207701_10034573	All Organisms → cellular organisms → Bacteria	4746	Open in IMG/M
3300025930\|Ga0207701_11081716	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300026075\|Ga0207708_11787212	Not Available	539	Open in IMG/M
3300026324\|Ga0209470_1107019	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1251	Open in IMG/M
3300026332\|Ga0209803_1147093	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	915	Open in IMG/M
3300027209\|Ga0209875_1036698	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	589	Open in IMG/M
3300027513\|Ga0208685_1022388	Not Available	1423	Open in IMG/M
3300027821\|Ga0209811_10025702	All Organisms → cellular organisms → Bacteria	1946	Open in IMG/M
3300027907\|Ga0207428_11129891	Not Available	547	Open in IMG/M
3300028536\|Ga0137415_11290104	Not Available	548	Open in IMG/M
3300031538\|Ga0310888_10248000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	999	Open in IMG/M
3300031548\|Ga0307408_100028451	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3862	Open in IMG/M
3300031854\|Ga0310904_10813413	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	655	Open in IMG/M
3300031908\|Ga0310900_10757036	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	782	Open in IMG/M
3300031944\|Ga0310884_10076596	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_57_13	1580	Open in IMG/M
3300032003\|Ga0310897_10457870	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	613	Open in IMG/M
3300032004\|Ga0307414_11906722	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	555	Open in IMG/M
3300032012\|Ga0310902_10690053	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_57_13	687	Open in IMG/M
3300032017\|Ga0310899_10571153	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	563	Open in IMG/M
3300032157\|Ga0315912_10061823	Not Available	2953	Open in IMG/M
3300032211\|Ga0310896_10891657	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514	Open in IMG/M
3300032829\|Ga0335070_10045074	All Organisms → cellular organisms → Bacteria → Proteobacteria	4894	Open in IMG/M
3300033406\|Ga0316604_10250281	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	962	Open in IMG/M
3300033408\|Ga0316605_10311993	Not Available	1385	Open in IMG/M
3300033413\|Ga0316603_10841182	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	863	Open in IMG/M
3300033419\|Ga0316601_100452765	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1221	Open in IMG/M
3300033419\|Ga0316601_101491135	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	681	Open in IMG/M
3300033481\|Ga0316600_11038762	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	581	Open in IMG/M
3300033482\|Ga0316627_100971761	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	821	Open in IMG/M
3300034147\|Ga0364925_0041116	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300034147\|Ga0364925_0335155	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	569	Open in IMG/M
3300034148\|Ga0364927_0146223	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	678	Open in IMG/M
3300034155\|Ga0370498_106209	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	657	Open in IMG/M
3300034155\|Ga0370498_183380	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.94%
Host-Associated	Host-Associated	14.06%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.19%
Aquatic	Environmental → Aquatic	18.75%
Plants	Host-Associated → Plants	14.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.84%
Sediment	Environmental → Aquatic → Sediment	14.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.47%
Freshwater	Environmental → Aquatic → Freshwater	2.34%
Floodplain	Environmental → Terrestrial → Floodplain	2.34%
Marine	Environmental → Aquatic → Marine	1.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	14.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.81%
Loam	Environmental → Terrestrial → Soil → Loam	7.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.47%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.91%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.34%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.56%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.78%
Sand	Environmental → Terrestrial → Soil → Sand	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	14.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.25%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.91%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.34%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.59%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.12%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.12%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.34%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.34%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.56%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.78%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.78%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.78%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2001200001	Soil microbial communities from Waseca County, Minnesota, USA - Sample 10150	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004022	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005277	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005507	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011398	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT600_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012227	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT436_2	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014871	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_1Da	Environmental	Open in IMG/M
3300014882	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10D	Environmental	Open in IMG/M
3300015257	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_10D	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300027209	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M
3300034155	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2001379486	2001200001	Soil	MKSATFGFVIMLFLSFMGCTAAPDRILLKEQGEDNYCHMKIETYGDPNMPTEREVVDYYGPCDERPGPRR
ICChiseqgaiiDRAFT_06094201	3300000033	Soil	PALFGFLSVLVFLMVGCTAQPDRILLKERGADNRCHMKIETYGDPAMPTEREVVDYXGPCDERPGXXVSRXTE*
ICChiseqgaiiFebDRAFT_110563392	3300000363	Soil	MKPVLFGALVISLVGCTAQPDRILLKERGADNRCHMKIETYGDPAMPTEREVVDYYGPCDERPGARVSRETE*
F14TC_1018205012	3300000559	Soil	MKTTKLIGSLVILFAFVGCTAAPDRILVKEQGDNNRCHMKIETYGDPAMPTEREVVDYYGPCDERPSKK*
JGI10216J12902_1100588922	3300000956	Soil	MKSTAFRLLVVLFLLLTGCTAAPDRILLKERGPDNRCHMKIETYGDPNMPTEREVVDYYGPCDERPSARVNRDGAE*
JGI10216J12902_1144033551	3300000956	Soil	MRSTKLIGSLVILFASFIGCTAAPDRILLKEQGDDNRCHMKIETYGDPKMPTEREVVDYYGPCDERPSKR*
JGI10216J12902_1188936061	3300000956	Soil	PALFGFLSVLVFLMVGCTAQPDRILLKERGADNRCHMKIETYGDPAMPTEREVVDYYGPCDERPGPRVSRDTE*
Ga0055439_101159442	3300004019	Natural And Restored Wetlands	MKPATFGLLVILFLSFIGCTAQPDRILLKEQGEDNRCHMKIETYGDPANPTEREVVDYYGPCDERPPPRR*
Ga0055432_101942172	3300004022	Natural And Restored Wetlands	EVSSIPVSGPGKEVEMKPAALGCFIALVLSFMGCTAAPDRILLKEQGEDNYCHMKIETYGDPANPTEREVVDYYGPCDERPGPRRQ*
Ga0062593_1003982552	3300004114	Soil	MKSATFGFVIMLFLSFMGCTAAPDRILLKEQGEDNYCHMKIETYGDPNMPTEREVVDYYGPCDERPGPRR*
Ga0062593_1017168881	3300004114	Soil	MKLIGLLVILMSSFIGCTGQPDRILLKERGADNRCHMIIETSGDPGNPTDRPVVDYYGPCDERPSR*
Ga0062590_1027326851	3300004157	Soil	MKLAAFGFLITLFLSFVGCTAAPDRILLKEQGEDNHCHMKIETYGDPANPTEREVVDYYGPCDERPGPRR*
Ga0062590_1028479382	3300004157	Soil	MKQVLFGALVVSLVGCTAQPDRILLKERGADNRCHMKIETYGDPAMPTEREVVDYYGPCDERPGARVSRETE*
Ga0063356_1003633732	3300004463	Arabidopsis Thaliana Rhizosphere	MKLIGALGILFALLTGCTAAPDRILLKEQGDDNRCHMKIETYGDPLMPTERQVVDYYGPCDERPSTK*
Ga0063356_1026017411	3300004463	Arabidopsis Thaliana Rhizosphere	MKSTKSIGSLVILFASFVGCTAAPDRILLKEQGDDNRCHMKIETYGAPLMPTEREVVDYYGPCDERPSK*
Ga0063356_1027762113	3300004463	Arabidopsis Thaliana Rhizosphere	MKPALFGFLSVLVFLMVGCTAQPDRILLKERGADNRCHMKIETYGDPAMPTEREVVDYYGPCDERPGPRVSRDTE*
Ga0063356_1035121232	3300004463	Arabidopsis Thaliana Rhizosphere	SLIGCTAAPDRILLKERGPDNRCHMKIETYGDPNMPTEREVVDYYGPCDERPSARVNRDGAE*
Ga0066688_106453931	3300005178	Soil	MKSTKLIRSPVILFASFVGCTAAPDRILLKEQGDDNRCHMKIETYGDPNRPTEREVVDYYGPCDERPSKR*
Ga0066676_100275883	3300005186	Soil	MKSTKLTGSLVILFPSFVGCTAAPDRILLKEQGDNNRCHMKIETYGDPAVPTEREVVDYYGPCDERPSKK*
Ga0065716_10011781	3300005277	Arabidopsis Rhizosphere	MKSSKLFWLVTALILLVSLVGCTARGDRILLKERGADNRCHMKIERSGDPTNLSNREVVDYYGPCDERPD
Ga0065704_107816451	3300005289	Switchgrass Rhizosphere	MKSSKLFWLVTALILLVSLVGCTARGDRILLKERGADNRCHMKIERSGDPTNLSNREVVDYYGPCDERPDRRSLKPE*
Ga0065705_101416703	3300005294	Switchgrass Rhizosphere	MKSRKSIGPLVILFSSFVGCTAAPDRILLKERGDDNRCHMKIETYGDPLMPTEREVVDYYGPCDERPSR*
Ga0070690_1016640291	3300005330	Switchgrass Rhizosphere	MKLIGLLVILMSSFIGCTGQPDRILLKERGADNRCHMIIETSGEPGNPTDRPVVDYYGPCDERP
Ga0070700_1010563552	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MKLIGLLVILMSSFIGCTGQPDRILLKERGADNRCHMIIETSGEPGNPTDRPVVDYYGPCDERPSR*
Ga0068867_1014547471	3300005459	Miscanthus Rhizosphere	MKSSKLFWLVTALILLVSLVGCTARGDRILLKERGADNRCHMKIERSGDPTTLSNREVVDYYGPCDERPSR*
Ga0070706_1014942561	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKSTKLTGSLVILFASFVGCTAAPDRLLLKEPGDNNRCHMKIETYGDPAVPTEREIVDYYGPCDERPSKK*
Ga0070698_1017299222	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	ILFASFVGCTAAPDRILLKEQGDNNRCHMKIETYGDPAVPTEREIVDYYGPCDERPSKK*
Ga0074259_103091691	3300005507	Arabidopsis Rhizosphere	MKSSKLFWLVTALILLVSLVGCTARGDRILLKERGADDRCHMKIERSGDPTNLSNREVVDYYGPCDERPDRRSLKPE*
Ga0070696_1004498323	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MKLIGLLVILMSSFIGCTGQPDRILLKERGADNRCHMIIETSGDPGNPTDRPVVDYYGPCDERP
Ga0070693_1010438451	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MKSSKLFWLVTALILLVSLVGCTARGDRILLNERGADNRCHMKIERSGDPTNLSNREVVDYYGPCDERPDQRSLKPE*
Ga0066656_101187262	3300006034	Soil	MKSTKLTGSLVILFASFVGCTAAPDRLLLKEQGDNNRCHMKIETYGDPAVPTEREIVDYYGPCDERPSKK*
Ga0066660_104418752	3300006800	Soil	MKSTKLIRSSVILFASFVGCTAAPDRILLKEQGDDNRCHMKIETYGDPNRPTEREVVDYYGPCDERPSKR*
Ga0075431_1006292711	3300006847	Populus Rhizosphere	MKSSKLFWLVTALILLVSLVGCTARGDRILLNERGADNRCHMKIERSGDPTNLSNREVVDYYGPCDERPDRRSLKPE*
Ga0075420_1001925992	3300006853	Populus Rhizosphere	MKSSKLFWLVTALILLVSLVGCTARGDRILLKERGADNRCHMKIERSGDPTNLSNREVVDYYGPCDERPDRRS
Ga0068865_1011438611	3300006881	Miscanthus Rhizosphere	MKSSKLFWLVTALILLVSLVGCTARGDRILLKERGADNRCHMKIERSGDPTNLSNREVVDYYGPCDERPDQRSLKPE*
Ga0079215_111288002	3300006894	Agricultural Soil	MKSTKLMGSLVILFASFVGCTAAPDRILLKEQGDNNRCHMKIETYGDPAVPTEREVVDYYGPCDERPS
Ga0079216_106018092	3300006918	Agricultural Soil	MKSTKLMGSLIILFASFVGCTAAPDRILLTEQGDNNRCHMKIETYGDPAVPTEREVVDYYGPCDERPLKRPSR*
Ga0079218_110465202	3300007004	Agricultural Soil	MKSTKLMGSIVILFASFVGCTAAPDRILLKEEGDNNRCHMKIETYGDPAMPTEREVVDYYGPCDERPSKK*
Ga0105106_100907053	3300009078	Freshwater Sediment	MALFLSFMGCTAAPDRILLKEQGEDNRCHMKIETYGDPANPTEREVVDYYGPCDERPGPRR*
Ga0075418_119530671	3300009100	Populus Rhizosphere	MKSSKLFWLVTALILLVSLVGCTARGDRILLNERGADNRCHMKIERSGDPTNLSNREVVDYYGPCDERPDRRS
Ga0066709_1037169732	3300009137	Grasslands Soil	PVNQRKDSSMKSTKLIRSPVILFASFVGCTAAPDRILLKEQGDDNRCHMKIETYGDPNRPTEREVVDYYGPCDERPSKR*
Ga0113563_105275503	3300009167	Freshwater Wetlands	MEMKPATFGFVTMLFLSFMGCTATPDRILLKEEGEDNRCHMKIETYGDPANPTEREVVDYYGPCDERPAPRR*
Ga0105347_10009573	3300009609	Soil	MEMKPATFGFVTMLFLSFMGCTATPDRILLKEEGEDNRCHMKIETYGDPANPTEREVVDYYGPCDERPGPRR*
Ga0105347_10172393	3300009609	Soil	MGCTAEPDRILTKVQGEDNRCHMKIETYGDPSMPTEREVVDYYGPCDERPGPRR*
Ga0105252_101342101	3300009678	Soil	MEMKPATFGFVTMLFLSFMGCTATPDRILLKEEGEDNRCHMKIETYGDPANPTEREVVDYYGPCDERPDPRR*
Ga0126314_113343601	3300010042	Serpentine Soil	MKSTAFRLLGVLFLSLIGCTATPDRILLKERGPDNRCHMKIETYGDPNMPTEREVVDYYGPCDERPSARVNRDGAE*
Ga0134088_100614323	3300010304	Grasslands Soil	MKSTKLTGSLVILFASFVGCTAAPDRILLKEQGDNNRCHMKIETYGDPAVPTEREVVDYYGPCDERPSKK*
Ga0134122_121191471	3300010400	Terrestrial Soil	MKSSKLFWLVTALILLVSLVGCTARGDRILLNERGADNRCHMKIERSGDPTNLSNREVIDYYGPCDERPDQRSLKPE*
Ga0134123_119709821	3300010403	Terrestrial Soil	MKLVGLLVILMSSFIGCTGQPDRILLKERGADNRCHMIIETSGEPGNPTDRPVVDYYGPCDERPSR*
Ga0137348_11001172	3300011398	Soil	MKPAIFGVPIVLLLSCMGCTAEPDRILTKVQGEDNRCHMKIETYGDPSMPTEREVVDYYGPCDERPGPRR*
Ga0137426_12612371	3300011435	Soil	MEMKLATFGFVTMLFLSFMGCTATPDRILLKEEGEDNRCHMKIETYGDPANPTEREVVDYYGPCDERPGPRR*
Ga0137364_102192211	3300012198	Vadose Zone Soil	MASFGSKENFKMKSLKLIRSLVFLIIPFSLAVGCTAAPDRILLREHAYDDYCHMKVETQGDPLRPTEREVVDYYGPCDERPPG*
Ga0137376_103292862	3300012208	Vadose Zone Soil	MKSTKLIRSPVILFASFVGCTAAPDRILLKEQGDDNRCHMKIETYGDPNRPTEREVVDYYGPCDKRPSKR*
Ga0137449_11393831	3300012227	Soil	MKPAIFGFPIVLFLSFMGCTAAPDRILMKEQGEDNRCHMKIETYGDPSMPTEREVVDYYGPCDERPGPRR*
Ga0137387_103708911	3300012349	Vadose Zone Soil	MKSTKLTGSRVILFASFVGCTAAPDRLLLKEQGDNNRCHMKIETYGDPAVPTEREVVDYYGPCDERPSKK*
Ga0137366_101348893	3300012354	Vadose Zone Soil	MKSTKLTGSLVILFASFVGCTAAPDRILLKEQGDNNRCHMKIETYGDPAVPTEREIVDYYGPCDERKK*
Ga0157351_10021193	3300012501	Unplanted Soil	MKSSKLFWLVTALILLVSLVGCTETGDRILLKERGADNRCHMKIERSGDPTNLSNREVVDYYGPCDERPDQRSLKPE*
Ga0137394_109463871	3300012922	Vadose Zone Soil	MKSAKLIGARVILFASFLGCTAAPDRILLTERGDNNRCHMKIETYGDPAMPTEREVVDYYGPCDERPSR*
Ga0137407_104249252	3300012930	Vadose Zone Soil	FVGCTAAPDRILLKEQGDNNRCHMKIETYGDPAVPTEREVVDYYGPCDERPSKK*
Ga0164303_106811931	3300012957	Soil	MKSSKLFWLVTALILLVSLVGCTATGDRILLKERGADNRCHMKIERSGDPTTLSNREVVDYYGPCDERPDQRSLKPE*
Ga0157378_102266372	3300013297	Miscanthus Rhizosphere	MKSSKLFWLVTALILLVSLVGCTARGDRILLNERGADNRCHMKIERSGDPTNLSNREVVDYYGPCDERPDRRSLRPE*
Ga0180095_10891692	3300014871	Soil	MLLLSFMGCTAEPDRILMKVQGEDNRCHMKIETYGDPSMPTEREVVDYYGPCDERPGPRR
Ga0180069_11729872	3300014882	Soil	GFPIMLLLSFMGCTAEPDRILMKVQGEDNRCHMKIETYGDPSMPTEREVVDYYGPCDERPGPRR*
Ga0180067_10215482	3300015257	Soil	VPIVLLLSCMGCTAEPDRILTKVQGEDNRCHMKIETYGDPSMPTEREVVDYYGPCDERPGPRR*
Ga0132257_1013490082	3300015373	Arabidopsis Rhizosphere	WLVTALILLVSLVGCTATGDRILLKERGADNRCHMKIERSGDPTTLSNREVVDYYGPCDERPDRRSLKPE*
Ga0132255_1014449241	3300015374	Arabidopsis Rhizosphere	MKSSKLFWLVTALILLVSLVGCTARGDRILLNERGADNRCHMKIERSGDPTNLSNREVVDYYGPCDERPDQRSLKSE*
Ga0184610_11838771	3300017997	Groundwater Sediment	MKSTKLMALLVILFASFVGCTAAPDRILLKEQGDNNRCHMKIETYGDPAMPTEREVVDYYGPCDERPSKK
Ga0184604_100648913	3300018000	Groundwater Sediment	MRLGLLVILISSFIGCTGQPDRILLKERGADNRCHMIIETSGDPGNPTDRPVVDYYGPCDERPSR
Ga0184638_10352071	3300018052	Groundwater Sediment	MKSTKLIGSIAILFASFVGCTAAPDRILLKEQGDNNRCHMKIETYGDPAMPTEREVVDYYGPCDERPSKK
Ga0184626_100087914	3300018053	Groundwater Sediment	MKSTKLIGSLVILFASFVGCTAAPDRILLKEQGDNNRCHMKIETYGDPAMPTEREVVDYYGPCDERPSKK
Ga0184623_100524313	3300018056	Groundwater Sediment	MKSTKLIGSLVILFASFVGCTAAPDRILLKEQGDNNRCHMKIETYGDPAMPTERQVVDYYGPCDERPSKK
Ga0184619_104420851	3300018061	Groundwater Sediment	MRSTKLIGSLVILFASFIGCTAAPDRILLKEQGDDNRCHMKIETYGDPKMPTEREVVDY
Ga0184609_100441763	3300018076	Groundwater Sediment	MKSTKLMASLAILFASFVGCTAAPDRILLKEQGDNNRCHMKIETYGDPAVPNEREIVDYYGPCDERPSKK
Ga0184628_100061102	3300018083	Groundwater Sediment	MKPAIFGVPIVLLLSCMGCTAEPDRILTKVQGEDNRCHMKIETYGDPSMPTEREVVDYYGPCDERPGPRR
Ga0184629_105060411	3300018084	Groundwater Sediment	MKPAIFGFLIVLFLSFMGCTAEPDRILMKVQGEDNRCHMKIETYGDPSMPTEREVVDYYGPCDERPGPRR
Ga0190265_102980172	3300018422	Soil	MNPAIFRFLIVLFFSFMGCTAAPDRILMKEQGEDNRCHMKIETYGDPLMPTEREVVDFYGPCDERPGPRR
Ga0190265_105202953	3300018422	Soil	MKSTKLMGSLIILFASLVGCTAAPDRILLKERGDDNRCHMKIETYGDPAMPTEREVVDYYGPCDERPSR
Ga0190265_119683692	3300018422	Soil	MKSTKLIGSLVILFASLIGCTAAPDRILLKERGENNRCHMKIETYGDPLMPTEREVVDYYGPCDERPSR
Ga0190265_129208972	3300018422	Soil	MKSSSLLGFLVLSFVSIAGCTAQPDRILLKEEGANNRCHMKIETYGDPTKPTEREVVDYYGPC
Ga0190272_114072592	3300018429	Soil	MKPAISAFLIVLFLSFMGCTAAPDRILMKEQGEDNRCHMKIETYGDPSMPTEREVVDYYGPCDERPGPRR
Ga0066667_102364711	3300018433	Grasslands Soil	MKSTKLIRSPVILFASFVGCTAAPDRILLKEQGDDNRCHMKIETYGDPNRPTEREVV
Ga0190270_113602841	3300018469	Soil	MKPAILGFPIVLLLSFMGCTAEPDRILMKVQGEDNRCHMKIETYGDPNMPTEREVVDYYGPCDERPGPRR
Ga0190274_110290892	3300018476	Soil	MKSTALRFLGVFFLSLIGCTATPDRILLKERGPDNRCHMKIETYGDPNMPTEREVVDYYGPCDERPSARVNRDGAE
Ga0190271_115249891	3300018481	Soil	MKPAIFGFLIVLFLSFTGCTAEPDRILMKVQGEDNRCHMKIETYGDPSKPTEREVVDYYGLCDERPGPRR
Ga0066669_102350582	3300018482	Grasslands Soil	MASFGSKENFKMKSLKLIRSLVFLIIPFSLAVGCTAAPDRILLREHAYDDYCHMKVETQGDPLRPTEREVVDYYGPCDERPPG
Ga0190264_113720991	3300019377	Soil	MKSTKSIGSLVILFASFVGCTATPDRILLKERGNNNRCHMKIETYGDPLMPIEREVVDYYGPCDERPSR
Ga0193715_10604121	3300019878	Soil	MRSTKLIGSLVILFASFIGCTAAPDRILLKEQGDDNRCHMKIETYGDPKMPTEREVVDYYGPCDERPSKR
Ga0193747_10650911	3300019885	Soil	MRSTKLIGSLVILFASFIGCTAAPDRILLKEQGDDNRCHMKIETYGDPKMPTEREVVDYYGPCDERP
Ga0193743_10297912	3300019889	Soil	MRLVGLLVILISSFIGCTGQPDRILLKERGADNRCHMIIETSGDPGNPTDRPVVDYYGPCDERPSR
Ga0193717_10281833	3300020060	Soil	MKSTKLMGSVVILFASFVGCTAAPDRILLKEQGENNRCHMKIETYGDPTKPTEREVVDYYGPCDERPTRR
Ga0210378_100464882	3300021073	Groundwater Sediment	MKSTKLIGSIAILFASFVGCTAAPDRILLKKQGDNNRCHMKIETYGDPAMPTEREVVDYYGPCDERPSKK
Ga0193699_101312052	3300021363	Soil	MKLIGLLVILISSFIGCTGQPDRILLKERGADNRCHMIIETSGDPGNPTDRPVVDYYGPCDERPSR
Ga0193695_10404681	3300021418	Soil	MRSTKLIGSLVILFASFIGCTAAPDRILLKEQGDDNRCHMKIETYGDPKMPTEREVVDYY
Ga0207652_103822453	3300025921	Corn Rhizosphere	MKLIGLLVILMSSFIGCTGQPDRILLKERGADNRCHMIIETSGDPGNPTDRPVVDYYGPCDERPSR
Ga0207701_100345733	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MKSSKLFWLVTALILLVSLVGCTARGDRILLKERGADNRCHMKIERSGDPTNLSNREVVDYYGPCDERPDQRSLKPE
Ga0207701_110817162	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRLGLLVVLISSFIGCTGQPDRILLKERGADNRCHMIIETSGEPGNPTDRPVVDYYGPCDERPSR
Ga0207708_117872122	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	FWLVTALILLVSLVGCTARGDRILLNERGADNRCHMKIERSGDPTNLSNREVVDYYGPCDERPSR
Ga0209470_11070191	3300026324	Soil	MKSTKLTGSLVILFPSFVGCTAAPDRILLKEQGDNNRCHMKIETYGDPTVPTEREVVDYYGPCDERPSKK
Ga0209803_11470931	3300026332	Soil	MKSTKLTGSLVILFPSFVGCTAAPDRILLKEQGDNNRCHMKIETYGDPAVPTEREVVDYYGPCDERPSKK
Ga0209875_10366982	3300027209	Groundwater Sand	NLIGSLVILFASFVGCTAAPDRILLKEQGDNNRCHMKIETYGDPAMPTEREVVDYYGPCD
Ga0208685_10223881	3300027513	Soil	MLFLSFMGCTATPDRILLKEEGEDNRCHMKIETYGDPANPTEREVVDYYGPCDERPGPRR
Ga0209811_100257022	3300027821	Surface Soil	MKSSKLFWLVTALILLVSLVGCTATGDRILLKERGADNRCHMKIERSGDPTTLSDREVVDYYGPCDERPDRRSLKPEEILVVAD
Ga0207428_111298911	3300027907	Populus Rhizosphere	VLILLVSLVGCTARGDRILLKERGADNRCHMKIERSGDPTNLSNREVVDYYGPCDERPDRRSLKPE
Ga0137415_112901041	3300028536	Vadose Zone Soil	MKSSKLFWLVTILILLVSLVGCTAPGDRILLKERGADNRCHMKIERSGDPTTLSNREVVDYYGPCDERPDRRSLKPE
Ga0310888_102480001	3300031538	Soil	VLFLSLIGCTATPDRILLKERGPDNRCHMKIETYGDPNMPTEREVVDYYGPCDERPSARVNRDGAE
Ga0307408_1000284515	3300031548	Rhizosphere	MKSTAFRLLGVFFLSLIGCTATPDRILLKERGPDNRCHMKIETYGDPNMPTEREVVDYYGPCDERPSARVNRDGAE
Ga0310904_108134132	3300031854	Soil	MKSSACRLLGVLFLSLIGCTAAPDRILLKERGPDNRCHMKIETYGDPNMPTEREVVDYYGPCDERPSARVNRDGAE
Ga0310900_107570361	3300031908	Soil	MKLAAFGFLITLFLSFVGCTAAPDRILLKEQGEDNHCHMKIETYGDPANPTEREVVDYYGPCDERPGPRR
Ga0310884_100765964	3300031944	Soil	MKSTVFRLLGVLFLSLIGCTAAPDRILLKERGPDNRCHMKIETYGDPANPTEREVVDYY
Ga0310897_104578701	3300032003	Soil	LLGVLFLSLIGCTATPDRILLKERGPDNRCHMKIETYGDPNMPTEREVVDYYGPCDERPSARVNRDGAE
Ga0307414_119067222	3300032004	Rhizosphere	MKSTAFRLLGVFFLSLIGCTATPDRILLKERGPDNRCHMKIETYGDPNMPTEREVVDYSGPCDERPSARVNRDGA
Ga0310902_106900532	3300032012	Soil	MKSSAFRLLGVLFLSLIGCTATPDRILLKERGPDNRCHMKIETYGDPNMPTEREVVDYYGPCDERPS
Ga0310899_105711531	3300032017	Soil	YQVSKPGKEVEMKLAAFGFLITLFLSFVGCTAAPDRILLKEQGEDNHCHMKIETYGDPANPTEREVVDYYGPCDERPGPRR
Ga0315912_100618232	3300032157	Soil	MKPAAFGFLIALVLSFMGCTAAPDRILLKEQGEDNHCHMKIETYGDPANPTEREVVDYYGPCDERPGPRR
Ga0310896_108916571	3300032211	Soil	LSFVGCTAAPDRILLKEQGEDNHCHMKIETYGDPANPTEREVVDYYGPCDERPGPRR
Ga0335070_100450742	3300032829	Soil	MRSNQKIRTRSFVFLAIPFAFILGCTAEPDRVLLKEHAGNNYCHMKIETHGDPRIPTEREVVDYYGPCDERPSR
Ga0316604_102502811	3300033406	Soil	LNILFLSFTGCTAAPDRILLKEQGEDNYCHMKIETYGDPANPTEREVVDYYGPCDERPAPRR
Ga0316605_103119931	3300033408	Soil	MKPATFGLLNILFLSFTGCTAAPDRILLKEQGEDNYCHMKIETYGDPANPTEREVVDYYGPCDERPGP
Ga0316603_108411821	3300033413	Soil	MKPATFALLNILFLSFTGCTAAPDRILLKEQGEDNYCHMKIETYGDPANPTEREVVDYYGPCDERPAPRR
Ga0316601_1004527651	3300033419	Soil	VKLATFSFLVTLSLSFTGCTAAPDRILLKEQGEDNYCHMKIETYGDPANPTEREVVDYYGPCDERPAPRR
Ga0316601_1014911351	3300033419	Soil	MKPATFGFVTMLFLSFMGCTATPDRILLKEEGEDNRCHMKIETYGDPANPTEREVVDYYGPCDERPAPRR
Ga0316600_110387621	3300033481	Soil	MKPATFALLNILFLSFTGCTAAPDRILLKEQGEDNYCHMKIETYGDPANPTEREVVDYYGPCDERPGPRR
Ga0316627_1009717612	3300033482	Soil	SEPGKEMEMKPATFGLLNILFLSFTGCTAAPDRILLKEQGEDNYCHMKIETYGDPANPTEREVVDYYGPCDERPGPRR
Ga0364925_0041116_334_498	3300034147	Sediment	MGCTAEPDRILTKVQGEDNRCHMKIETYGDPSMPTEREVVDYYGPCDERPGPRR
Ga0364925_0335155_113_331	3300034147	Sediment	MEMKPATFGFVTMLFLSFMGCTATPDRILLKEEGEDNRCHMKIETYGDPANPTEREVVDYYGPCDERPGPRR
Ga0364927_0146223_471_677	3300034148	Sediment	MKPAIFGVPIVLLLSCMGCTAEPDRILTKVQGEDNRCHMKIETYGDPSMPTEREVVDYYGPCDERPGPR
Ga0370498_106209_475_639	3300034155	Untreated Peat Soil	MGCTAQPDRILMKVQGEDNRCHMKIETYGDPSMPTEREVVDFYGPCDERPGPRR
Ga0370498_183380_2_190	3300034155	Untreated Peat Soil	MKPAIFGFLIGLFLSFMGCTAEPDRILMKVQGEDNRCHMKIETYGDPSMPTEREVVDFYGPCD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F064531

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences