Metagenome / Metatranscriptome Family F064542

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064542
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	64 residues
Representative Sequence	MKAYLVTTGTIFGLIAVLHLLRAIEERSLLATDPWYFLGMAALGVVAAALSVWAWRLLRLRVRS
Number of Associated Samples	104
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	43.31 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	77.34 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.594 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.312 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.688 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.04% β-sheet: 0.00% Coil/Unstructured: 36.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF05685	Uma2	6.25
PF00950	ABC-3	5.47
PF13360	PQQ_2	3.91
PF07929	PRiA4_ORF3	3.91
PF07606	DUF1569	3.91
PF13311	DUF4080	3.12
PF00326	Peptidase_S9	2.34
PF06439	3keto-disac_hyd	2.34
PF14255	Cys_rich_CPXG	1.56
PF00768	Peptidase_S11	1.56
PF01810	LysE	1.56
PF00977	His_biosynth	1.56
PF01297	ZnuA	0.78
PF11746	DUF3303	0.78
PF05524	PEP-utilisers_N	0.78
PF03795	YCII	0.78
PF08544	GHMP_kinases_C	0.78
PF13489	Methyltransf_23	0.78
PF07859	Abhydrolase_3	0.78
PF00080	Sod_Cu	0.78
PF05406	WGR	0.78
PF13558	SbcC_Walker_B	0.78
PF04342	DMT_6	0.78
PF00589	Phage_integrase	0.78
PF13522	GATase_6	0.78
PF00672	HAMP	0.78
PF12439	GDE_N	0.78
PF08681	DUF1778	0.78
PF14743	DNA_ligase_OB_2	0.78
PF13650	Asp_protease_2	0.78
PF01261	AP_endonuc_2	0.78
PF13181	TPR_8	0.78
PF08757	CotH	0.78
PF01872	RibD_C	0.78
PF13544	Obsolete Pfam Family	0.78
PF00483	NTP_transferase	0.78
PF07963	N_methyl	0.78
PF10604	Polyketide_cyc2	0.78
PF01841	Transglut_core	0.78
PF07394	DUF1501	0.78
PF08282	Hydrolase_3	0.78
PF00926	DHBP_synthase	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	6.25
COG0609	ABC-type Fe3+-siderophore transport system, permease component	Inorganic ion transport and metabolism [P]	5.47
COG1108	ABC-type Mn2+/Zn2+ transport system, permease component	Inorganic ion transport and metabolism [P]	5.47
COG4606	ABC-type enterochelin transport system, permease component	Inorganic ion transport and metabolism [P]	5.47
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.56
COG0108	3,4-dihydroxy-2-butanone 4-phosphate synthase	Coenzyme transport and metabolism [H]	0.78
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.78
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	0.78
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.78
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.78
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.78
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.78
COG2032	Cu/Zn superoxide dismutase	Inorganic ion transport and metabolism [P]	0.78
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.78
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.78
COG3169	Uncharacterized membrane protein, DMT/DUF486 family	Function unknown [S]	0.78
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	0.78
COG3831	WGR domain, predicted DNA-binding domain in MolR	Transcription [K]	0.78
COG4453	Uncharacterized conserved protein, DUF1778 family	Function unknown [S]	0.78
COG5337	Spore coat protein CotH	Cell wall/membrane/envelope biogenesis [M]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.59 %
Unclassified	root	N/A	16.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.59 %
Unclassified	root	N/A	16.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.59 %
Unclassified	root	N/A	16.41 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	29.69 %
Unclassified	root	N/A	16.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.34 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	17.97 %
Unclassified	root	N/A	16.41 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	11.72 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.56 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.41 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	9.38 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	7.03 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	5.47 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	1.56 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.78 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.78 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.78 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.41 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.03 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	5.47 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	3.12 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2.34 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1.56 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.78 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.78 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.41 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.03 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	3.91 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	3.12 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2.34 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1.56 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1.56 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.78 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.78 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.41 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.03 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	3.91 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2.34 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	1.56 %
Telmatocola	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola	1.56 %
Gemmata	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata	0.78 %
unclassified Verrucomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae	0.78 %
Verrucomicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	0.78 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.78 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.78 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.41 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.03 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3.12 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2.34 %
Telmatocola sphagniphila	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	1.56 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1.56 %
Verrucomicrobium spinosum	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → Verrucomicrobium spinosum	0.78 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	0.78 %
Gemmata	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata	0.78 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.78 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.78 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001471\|JGI12712J15308_10108506	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300003324\|soilH2_10411992	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300004080\|Ga0062385_10755030	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300004091\|Ga0062387_100231292	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300004114\|Ga0062593_103138301	Not Available	529	Open in IMG/M
3300004463\|Ga0063356_100110083	All Organisms → cellular organisms → Bacteria	3020	Open in IMG/M
3300004631\|Ga0058899_11125159	Not Available	521	Open in IMG/M
3300005172\|Ga0066683_10220109	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300005177\|Ga0066690_11020121	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005178\|Ga0066688_10403191	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300005179\|Ga0066684_10250150	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300005332\|Ga0066388_100985934	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300005332\|Ga0066388_101190992	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300005340\|Ga0070689_100734556	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300005447\|Ga0066689_10243161	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300005529\|Ga0070741_10000191	All Organisms → cellular organisms → Bacteria	230376	Open in IMG/M
3300005532\|Ga0070739_10005789	All Organisms → cellular organisms → Bacteria	13911	Open in IMG/M
3300005537\|Ga0070730_10030473	All Organisms → cellular organisms → Bacteria	4078	Open in IMG/M
3300005538\|Ga0070731_10585935	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300005559\|Ga0066700_10472273	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300005764\|Ga0066903_100097216	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	3954	Open in IMG/M
3300005764\|Ga0066903_104286471	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300005764\|Ga0066903_108766366	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300006031\|Ga0066651_10582231	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300006797\|Ga0066659_10109964	All Organisms → cellular organisms → Bacteria	1892	Open in IMG/M
3300006800\|Ga0066660_11393640	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300006893\|Ga0073928_10000325	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	114324	Open in IMG/M
3300006893\|Ga0073928_10814453	Not Available	644	Open in IMG/M
3300007265\|Ga0099794_10537381	Not Available	617	Open in IMG/M
3300009012\|Ga0066710_100188612	All Organisms → cellular organisms → Bacteria	2920	Open in IMG/M
3300009012\|Ga0066710_101480631	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300009012\|Ga0066710_101839776	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300009038\|Ga0099829_10987626	Not Available	698	Open in IMG/M
3300009137\|Ga0066709_100133431	All Organisms → cellular organisms → Bacteria	3134	Open in IMG/M
3300009137\|Ga0066709_101880163	Not Available	834	Open in IMG/M
3300009137\|Ga0066709_102853595	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	639	Open in IMG/M
3300009521\|Ga0116222_1036637	All Organisms → cellular organisms → Bacteria	2159	Open in IMG/M
3300009521\|Ga0116222_1153313	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300009523\|Ga0116221_1022565	All Organisms → cellular organisms → Bacteria	3266	Open in IMG/M
3300009524\|Ga0116225_1000421	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	33193	Open in IMG/M
3300009672\|Ga0116215_1000367	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	35690	Open in IMG/M
3300009683\|Ga0116224_10163939	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300010303\|Ga0134082_10317694	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	655	Open in IMG/M
3300010304\|Ga0134088_10165443	Not Available	1054	Open in IMG/M
3300010339\|Ga0074046_10549267	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	686	Open in IMG/M
3300010343\|Ga0074044_11019999	Not Available	542	Open in IMG/M
3300010379\|Ga0136449_100924203	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	1418	Open in IMG/M
3300010399\|Ga0134127_13312203	Not Available	527	Open in IMG/M
3300011270\|Ga0137391_10327526	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300011270\|Ga0137391_10461486	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata	1079	Open in IMG/M
3300012189\|Ga0137388_10985096	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	778	Open in IMG/M
3300012202\|Ga0137363_10468548	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → Verrucomicrobium spinosum	1055	Open in IMG/M
3300012204\|Ga0137374_10064575	All Organisms → cellular organisms → Bacteria	3650	Open in IMG/M
3300012205\|Ga0137362_10080246	All Organisms → cellular organisms → Bacteria	2720	Open in IMG/M
3300012205\|Ga0137362_10149917	All Organisms → cellular organisms → Bacteria	1993	Open in IMG/M
3300012362\|Ga0137361_10528144	All Organisms → cellular organisms → Bacteria → Proteobacteria	1083	Open in IMG/M
3300012582\|Ga0137358_10300190	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300012582\|Ga0137358_10815500	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	618	Open in IMG/M
3300012683\|Ga0137398_10866690	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300012683\|Ga0137398_11055276	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	561	Open in IMG/M
3300012918\|Ga0137396_11288742	Not Available	508	Open in IMG/M
3300012923\|Ga0137359_10635409	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	934	Open in IMG/M
3300012923\|Ga0137359_11451276	Not Available	574	Open in IMG/M
3300012927\|Ga0137416_11182193	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	688	Open in IMG/M
3300012929\|Ga0137404_11764030	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	575	Open in IMG/M
3300012930\|Ga0137407_11204329	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	719	Open in IMG/M
3300012944\|Ga0137410_10179979	All Organisms → cellular organisms → Bacteria → Acidobacteria	1627	Open in IMG/M
3300013297\|Ga0157378_11736028	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300014159\|Ga0181530_10053561	All Organisms → cellular organisms → Bacteria	2619	Open in IMG/M
3300014159\|Ga0181530_10218757	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300014326\|Ga0157380_11113810	Not Available	829	Open in IMG/M
3300014493\|Ga0182016_10014561	All Organisms → cellular organisms → Bacteria	7362	Open in IMG/M
3300014501\|Ga0182024_10245693	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2404	Open in IMG/M
3300014501\|Ga0182024_10521205	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300014501\|Ga0182024_11021135	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300015241\|Ga0137418_10407197	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300015245\|Ga0137409_10555598	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	975	Open in IMG/M
3300015264\|Ga0137403_10263165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1631	Open in IMG/M
3300015371\|Ga0132258_10480677	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	3102	Open in IMG/M
3300015374\|Ga0132255_101292081	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300016294\|Ga0182041_11717174	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300017970\|Ga0187783_10290433	Not Available	1193	Open in IMG/M
3300018017\|Ga0187872_10441482	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300018022\|Ga0187864_10215625	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300018431\|Ga0066655_10397398	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300018468\|Ga0066662_10137264	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	1822	Open in IMG/M
3300018468\|Ga0066662_12730861	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	523	Open in IMG/M
3300018482\|Ga0066669_10383301	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300020583\|Ga0210401_10763165	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300021170\|Ga0210400_11151411	Not Available	626	Open in IMG/M
3300021181\|Ga0210388_10813971	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	809	Open in IMG/M
3300021433\|Ga0210391_11129520	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300022557\|Ga0212123_10000598	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	114307	Open in IMG/M
3300025664\|Ga0208849_1178843	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300026296\|Ga0209235_1272549	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	518	Open in IMG/M
3300026555\|Ga0179593_1072871	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1901	Open in IMG/M
3300026557\|Ga0179587_10249848	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1135	Open in IMG/M
3300027568\|Ga0208042_1094178	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300027570\|Ga0208043_1077865	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	922	Open in IMG/M
3300027625\|Ga0208044_1014480	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2923	Open in IMG/M
3300027662\|Ga0208565_1000733	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	22303	Open in IMG/M
3300027857\|Ga0209166_10089392	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300027908\|Ga0209006_10029227	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	4996	Open in IMG/M
3300028293\|Ga0247662_1092623	Not Available	548	Open in IMG/M
3300028563\|Ga0265319_1132724	Not Available	774	Open in IMG/M
3300028800\|Ga0265338_10328583	Not Available	1105	Open in IMG/M
3300028800\|Ga0265338_10714108	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	691	Open in IMG/M
3300029944\|Ga0311352_10533075	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	945	Open in IMG/M
3300029999\|Ga0311339_11467075	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	609	Open in IMG/M
3300030020\|Ga0311344_11276258	Not Available	548	Open in IMG/M
3300030520\|Ga0311372_11938065	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300030659\|Ga0316363_10000528	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	48455	Open in IMG/M
3300031234\|Ga0302325_10067317	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6960	Open in IMG/M
3300031234\|Ga0302325_10113893	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	5002	Open in IMG/M
3300031234\|Ga0302325_11593042	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	834	Open in IMG/M
3300031234\|Ga0302325_12699124	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	586	Open in IMG/M
3300031236\|Ga0302324_102484803	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300031236\|Ga0302324_102946718	Not Available	568	Open in IMG/M
3300031236\|Ga0302324_103298052	Not Available	529	Open in IMG/M
3300031718\|Ga0307474_10379496	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300031890\|Ga0306925_10539748	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300032160\|Ga0311301_10026838	All Organisms → cellular organisms → Bacteria	15403	Open in IMG/M
3300032770\|Ga0335085_11250476	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300032805\|Ga0335078_10174287	All Organisms → cellular organisms → Bacteria	3017	Open in IMG/M
3300032897\|Ga0335071_11238301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	691	Open in IMG/M
3300032954\|Ga0335083_10441222	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300033412\|Ga0310810_10028442	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6797	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.75%
Host-Associated	Host-Associated	6.25%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.72%
Aquatic	Environmental → Aquatic	7.03%
Plants	Host-Associated → Plants	6.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.12%
Peat	Environmental → Terrestrial → Peat	8.59%
Freshwater	Environmental → Aquatic → Freshwater	4.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.91%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.34%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.59%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.59%
Loam	Environmental → Terrestrial → Soil → Loam	7.03%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.69%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.34%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.25%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.47%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.69%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.12%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.34%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.56%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.31%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.16%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.59%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.03%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.12%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.34%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.34%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.56%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.56%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.78%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028293	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK03	Environmental	Open in IMG/M
3300028563	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_101085061	3300001471	Forest Soil	MKAYIITTGTLFGLIAIMHFLKAISERQQMTTDPWGFFGMAALGLLAAGLSVWASRLLRRQSRS*
soilH2_104119922	3300003324	Sugarcane Root And Bulk Soil	MKAYLTSTGAIFGLFAVLHLLRPIAERNRLKTEPLFFPGMAGLGILAAALSVWAWRLLFTAARRLES*
Ga0062385_107550302	3300004080	Bog Forest Soil	MKAYLVTTGTVFGLIAVMHLVRAIAERATLLTEPFYFLGMSGLGVVAAFLSGWAWGLLRRQMRS*
Ga0062387_1002312922	3300004091	Bog Forest Soil	MKAYLIITGTIFGLMALLHLWRAIAERSLLATRPGEFLWMAVLGLIAAGLSAWAWRLLRPAARS*
Ga0062593_1031383011	3300004114	Soil	MKAYLLTSGTIFGVIAILHGLRSIFEWRLLTTDPVSFLGMAALGVLAAVLSAWAWRLFARATRL*
Ga0063356_1001100833	3300004463	Arabidopsis Thaliana Rhizosphere	MKAYLITTGTVFGLIAVLHGIRAAAEWSLLKTDPGHFLAMAALGVLAAALSVWAWRLLRVSARV*
Ga0058899_111251591	3300004631	Forest Soil	TMKAYLITTGTLFGLLAVMHLLHAIGDWQSFGSAPWHSMGMAALGVVAAGLSVWAWRLLGLQNRS*
Ga0066683_102201092	3300005172	Soil	MKAYLVTTGTIFGLIAVLHLLRAIEERSLLATDPWYFLGMAALGVVAAALSVWAWRLLRLRVRS*
Ga0066690_110201212	3300005177	Soil	MKAYLITTGTVFSLIAIMHLLRGISERDLLTTNPGQFWFMAGLGVFAAGLSVWAWRLLRRTARS*
Ga0066688_104031911	3300005178	Soil	MKAYLVTTGTIFGLIAVLHLLRAIEEQSLLATDPWYFLGMAALGVVAAALSVW
Ga0066684_102501501	3300005179	Soil	MKAYLVTTGTIFGLIAVLHLLRAIEEWSLLATDPWYFLGMAALGVVAAALSVWAWRLLRLRVRS*
Ga0066388_1009859341	3300005332	Tropical Forest Soil	MKAYLITTGLIFGLIAVLHLLRDITERSRLMTDTGPYLAEAALGLVAAALAVWAWRLIRALSRS*
Ga0066388_1011909921	3300005332	Tropical Forest Soil	VKAYLITTGLIFGVIAVLHLLRDITERSRLTTDPWPYLAEAALGLVAAALAVWAWRLYRAHGRQ*
Ga0070689_1007345562	3300005340	Switchgrass Rhizosphere	MKAYLITTGTVFGLIAVLHGIRAAAEWSLLKTDPGHFLAMAALGVLSAALSVWAWRLLRVSARV*
Ga0066689_102431612	3300005447	Soil	MKAYLVTTGTIFGLIALLHLLRAIEERSLLATDPWYFLGMAALGVVAAALSVWAWRLLRLRVRS*
Ga0070741_10000191137	3300005529	Surface Soil	MKAYLITTGTIFGLLAVLHILKGIDERGKLATNPADFFIMAAMGLLAAGLSVWAWCLVRRQAR*
Ga0070739_100057899	3300005532	Surface Soil	MKAYLITTGTIFGLMGLMHIWRAIDESSKMKTDPGYFFGMAALGCLAAALSIWAWRLLWARSAGNSSPPSA*
Ga0070730_100304733	3300005537	Surface Soil	MKSYLITTGTVFGLIAGLHLLKGIEERQQLTTNPGQFWFMAALGVFAACLSVWAWRLLLRSA*
Ga0070731_105859352	3300005538	Surface Soil	MKAYVVTTGTIFAIIAVMHLMRAITEWSLLDTRPAEYLLMSALGVLAAALSAWAWRLLR*
Ga0066700_104722732	3300005559	Soil	MKAYLVTTGTVFGLIALLHLLRSIQDWPLLATEPWHYLIMSALGVVAAALSVWAWCLLRLRART*
Ga0066903_1000972161	3300005764	Tropical Forest Soil	VKAYLITTGAIFALIGVLHLLRDITERSRLTTDTLPYLAEAALGLVAAALAVWAWRLFRAQGRS*
Ga0066903_1042864712	3300005764	Tropical Forest Soil	MKAYLITTGAIFGIIAVLHLLRDITERARLATDPWPYLAEAALGLVAAALAVWAWRLIR
Ga0066903_1087663662	3300005764	Tropical Forest Soil	VKAYLITTGLIFGVIAVLHLLRDITERSRLTTDPWPYLAEAALGLVAAALAVWAWRLYRAHGRP*
Ga0066651_105822311	3300006031	Soil	MKAYLITTGAIFGLIAALHALRAIGEWSLLKTHPIEFVSMAALGALAAALSVWAWRLLRVPKQS*
Ga0066659_101099643	3300006797	Soil	MKAYLVTTGTIFGLIAVLHLLRAIEERSLLATDPWYFLGMAALGVVAAALSVWAWRLLQLRVRS*
Ga0066660_113936401	3300006800	Soil	VCALDHNPMKAYLITTGTVFGLMATLHVLRSIAEWRLLQTDPWHFFGMAALGLVAAGLSAWAWRLLRLKSRP*
Ga0073928_1000032520	3300006893	Iron-Sulfur Acid Spring	MKAYLASTGTIFGLIAVLHLLRSIDERARLATDPWYYLGTSALGVVAAALSVWAWCLLRLQVRT*
Ga0073928_108144531	3300006893	Iron-Sulfur Acid Spring	MKAYLIVTGVLFALIALLHLLRAIDERALVTTRPLYFLSMAGLGLLAAVLSVWAWSLLRRRSST*
Ga0099794_105373812	3300007265	Vadose Zone Soil	MKAYLITTGTIFGLLAAMHVVKAIDERHSLTTDPGYFLAMAAMGALAAALSVWAWRLLARQARS*
Ga0066710_1001886121	3300009012	Grasslands Soil	MKAYLVTTGTIFGLIAALHLLRAIQERSLLATDPWYFLGMAALGVVAAALSVWAWRLLQLRVRS
Ga0066710_1014806312	3300009012	Grasslands Soil	MKAYLIVTGTIFGLIAVLHVLRTITERHLLNTDPWHFSGMAFFGVVAAALSAWAWRLLILRRRS
Ga0066710_1018397761	3300009012	Grasslands Soil	REAISHKTMKAYLVTTGTIFGLIALLHLLRAIEERSLLATDPWYFLGMAALGVVAAALSVWAWRLLRPQVRS
Ga0099829_109876262	3300009038	Vadose Zone Soil	VKAYLITTGTVFGLIAVMHLLKSIAEWNLLTTRPWYFLNMTALGVLAAALSGWAWRLLWRSNDEGH*
Ga0066709_1001334313	3300009137	Grasslands Soil	MKAYLVTTGTIFGLIAALHLLRAIQERSLLATDPWYFLGMAALGVVAAALSVWAWRLLQLRVRS*
Ga0066709_1018801631	3300009137	Grasslands Soil	LVTTGTIFGLIALLHLLRAIEERSLLATDPWYFVGMAALGVVAAALSVWAWRLLRLRVRS
Ga0066709_1028535951	3300009137	Grasslands Soil	MKAYLVTTGTIFGLIALLHLLRAIEERSLLATDPWYFLGMAALGVVAAALSVWAWRL
Ga0116222_10366371	3300009521	Peatlands Soil	MLIISPLRKSAMKAYLVITGTLFGLIAVMHLLKSLAERSALATDPWNFLLMSALGVVAAALSVWAWWLLRMQIRK*
Ga0116222_11533133	3300009521	Peatlands Soil	MNRGAFCWIQSYESFLVITGALFGLIAVMHLLKSIAERSAFTTDPWYYLGTSALGVVAAALSVWAWWLLRLQFRK*
Ga0116221_10225653	3300009523	Peatlands Soil	MKAYLVITGALFGLIAVMHLLKSIAERSAFTTDPWYYLGTSALGVVAAALSVWAWWLLRLQFRK*
Ga0116225_10004211	3300009524	Peatlands Soil	MLIISPLRKSAMKAYLVITGTLFGLIAVMHLLKSLAELSALATDPWNFLLMSALGVVAAALSVWAWWLLRMQIRK*
Ga0116215_10003671	3300009672	Peatlands Soil	NTEKSSTPLAKMLIISPLRKSAMKAYLVITGTLFGLIAVMHLLKSLAERSALATDPWNFLLMSALGVVAAALSVWAWWLLRMQIRK*
Ga0116224_101639394	3300009683	Peatlands Soil	KAYLVITGALFGLIAVMHLLKSIAERSAFTTDPWYYLGTSALGVVAAALSVWAWWLLRLQFRK*
Ga0134082_103176941	3300010303	Grasslands Soil	MKAYLVTTGTIFGLIAVLHLLRAIEEWSLLATDPWYFLGMAALGVVAAALSVWA
Ga0134088_101654432	3300010304	Grasslands Soil	VTTGTIFGLIALLHLLRAIEERSLLATDPWYFLGMAALGVVAAALSVWAWRLLRPQVRS*
Ga0074046_105492672	3300010339	Bog Forest Soil	MKAYLVITGTLFGLIAVMHLLKSLAERSALATDPWNFLLMSALGVVAAALSVWAWWLLRLQIRK*
Ga0074044_110199991	3300010343	Bog Forest Soil	MKAYLITTGTIFGLVAVMHLIKALRDWSLLSTNPVEFLSMAALGGLAALLSVWAWRLLR*
Ga0136449_1009242031	3300010379	Peatlands Soil	VKAYLITTGTIFGLMAVMHLLKAIDERRLLATDPGYYLGMAALGVVAAALSAWAWRLLLPRVRS*
Ga0134127_133122031	3300010399	Terrestrial Soil	ASSMKAYLITTGTVFGLIAVLHGIRAAAEWSLLKTDPGHFLAMAALGVLSAALSVWAWRLLRVSARV*
Ga0137391_103275262	3300011270	Vadose Zone Soil	VKAYLITTGTIFGLIAVMHLLKSIAEWNLLTTRPWYFLNMTALGVLAAALSGWAWRLLWRSNDEGH*
Ga0137391_104614861	3300011270	Vadose Zone Soil	VKAYLIATATVFGLIAVMHLLKSIDERRLLATGPWYFLGMAALGVLAAILSVWAWRLLRLGVGP*
Ga0137388_109850962	3300012189	Vadose Zone Soil	VKTYLVATATLFGLIAVMHLLKSIAEWNLLTTRPWYFLNMTALGVLAAALSGWAWRLLWRSNDEGH*
Ga0137363_104685482	3300012202	Vadose Zone Soil	YLITTGTVFGLIAVMHFLRSMAEWHLLATDPWYFLGMAALGVLAAALCVWAWRLLRRQRWS*
Ga0137374_100645753	3300012204	Vadose Zone Soil	MRAYLIITGIIFGVIAVLHLLRGISEWRLLSTDPWYFLGMAALGVVAAALSFWAWRLVRLPGRP*
Ga0137362_100802462	3300012205	Vadose Zone Soil	VKAYLITTGIIFGLIAVMHFLRSIAEWHLLATDPWYFLGMAALGVLAAALCVWAWRLLRRQRWS*
Ga0137362_101499172	3300012205	Vadose Zone Soil	MKAYLITTGTIFGLLAARHVVKAIDERHSLTTDPGYFLAMAAMGALAAALSVWAWRLLARQARS*
Ga0137361_105281443	3300012362	Vadose Zone Soil	VTTGMIFGLIAVIHLLRDITERSRLTTDPWPYLAEAALGVVAAALAVWAWRLFRAQGRT*
Ga0137358_103001902	3300012582	Vadose Zone Soil	GLLAAMHVVKAIDERQSLTTNPGYFLAMAAVGALAAALSVWAWRLLARRARS*
Ga0137358_108155001	3300012582	Vadose Zone Soil	QEPVKAYLITTGTVFGLIAVMHFLRSMAEWHLLATDPWYFLGMAALGVLAAALSVWAWRLLRRQRWS*
Ga0137398_108666902	3300012683	Vadose Zone Soil	MKAYLITTGTIFGLLAAMHVVKAIDERQSLTTNPGYFLAMAAMGALAAALSVWAWRLLARRARS*
Ga0137398_110552762	3300012683	Vadose Zone Soil	MKAYLITTGTIFGLLAPLHILKAIDERHSLTTNTGEFLAMTALGALTTALSVWAWCLFRRQARS*
Ga0137396_112887421	3300012918	Vadose Zone Soil	MKAYLITTGTVFSLIAIMHLLRGISERELLTTNPGQFWFMAGLGVFAAGLSVWAWRLLLRTVRS*
Ga0137359_106354092	3300012923	Vadose Zone Soil	MKAYLITTGTIFGLLAAMHVVKAIDERHSLTTDPGQYTAMAAMGALAAALSVWAWRLLARQARS*
Ga0137359_114512762	3300012923	Vadose Zone Soil	YFVTTGMIFGLIAVIHLLRDITERSRLTTDPWPYLAEAALGVVAAALAVWAWRLFRAQGRT*
Ga0137416_111821932	3300012927	Vadose Zone Soil	VFSLIAIMHLRRGISERELLTTNPGQFWFMAALGVFAAGLSVWAWRLLRRTARS*
Ga0137404_117640301	3300012929	Vadose Zone Soil	MKAYLIISGTIFGLLAAMHVLKAIDERHSLTTDPGYFLAMATMGALAAALSVWAWRLLARQARS*
Ga0137407_112043291	3300012930	Vadose Zone Soil	MKAYLITTGTIFGLLAAMHVVKAIDERHSLTTDPGQYTAMAAMGALAAALSVW
Ga0137410_101799792	3300012944	Vadose Zone Soil	MKAYLITTGTIFGLLAPLHILKAIDERHSLTTNTGEFLAMTTLGALTTALSVWAWCLFRRQARS*
Ga0157378_117360282	3300013297	Miscanthus Rhizosphere	VKAYLITTGSIFGLIAVMHLLRGIAEWDRFTTEPGYFIGMAALGLVAAALSVWAWRLLWSKRQ*
Ga0181530_100535611	3300014159	Bog	MKAYLVTTGLIFGLIGVHHLLLAFKEWSLLSTHPVEFLSMAALGALAALLSFWAWRLLR*
Ga0181530_102187571	3300014159	Bog	MKAYLVTTGTIFGLMAAMHLLRAIAERDRLATDPLYFLGMAALGLVAAALSVWAWRLLRLHTRS*
Ga0157380_111138101	3300014326	Switchgrass Rhizosphere	ILHWTICKNRAALMKAYLITTGTVFGLIAVLHGIRAAAEWSLLKTDPGHFLAMAALGVLSAALSVWAWRLLRVSARV*
Ga0182016_100145611	3300014493	Bog	MKAYLITTGTIFGLIAAMHLIKALRDWSLLSSNPVEFLSMAALGALAALLSVWAWRLLRR
Ga0182024_102456933	3300014501	Permafrost	MKAYLVTTGALFGLIAIMHLLKAVADRQHMTTDPWGFFGMAALGLLAAGLSAWAWRLLRRQSRQ*
Ga0182024_105212052	3300014501	Permafrost	MKAYLVTTGTIFGLIAIMHLARAIDEFPAFTTDPVYFLGMAGLGVVAASLSGWAWRLLRRKPTA*
Ga0182024_110211352	3300014501	Permafrost	MKAYLVTTGTLFGLMAVMHLLRSIAEWRVLATDPWYFLGMAALGLVAAGLSVWAWRLLRRQGRS*
Ga0137418_104071973	3300015241	Vadose Zone Soil	VKAIDERQSLTTNPGYFLAMAAMGALAAALSVWAWRLLARRARS*
Ga0137409_105555983	3300015245	Vadose Zone Soil	MKAYLITTGTIFGLLAPLHILKAIDERHSLTTNTGEFLAMTTLGALTTALSVWA
Ga0137403_102631651	3300015264	Vadose Zone Soil	MKAYLITTGTIFGLLAAMHVVKAIDERHSLTTDPGYFLAMATMGALAAALSVWAWRLLARQARS*
Ga0132258_104806773	3300015371	Arabidopsis Rhizosphere	MKAYLLTSGTIFGLIAILHGLRSIFEWRLLATDPVSFLAMAALGVLAAGLSVWALRLFTRATRL*
Ga0132255_1012920812	3300015374	Arabidopsis Rhizosphere	MKAYLATTGAIFGLIAVLHLLRDITERARLATDPWPYLVEAALGLVAAALAVWAWRLFRAQRRS*
Ga0182041_117171742	3300016294	Soil	VKAYLLTTGTLFGLIAFMHLLKAIDEWPRLATDPVYYLGMAALGAVAAALSVWAWRLFRLPGRS
Ga0187783_102904333	3300017970	Tropical Peatland	MLEAEPTAMKAYLATTGTIFGLLAILHASRIVAEWSHLMGQPWYFAGIAAIGVVAAALSIWAWRLFLKK
Ga0187872_104414822	3300018017	Peatland	MKAYLVTTGALFGLIAVMHLLRAIAEWHLLTTDPWYFVGMAALGDVAAGLSAWAWRLLRLQSRS
Ga0187864_102156252	3300018022	Peatland	MKAYLVTTGALFGLIAVMHLLRAIAEWHLLTTDPWYFVGMAALGVVAAGLSAWAWRLLRLQSRS
Ga0066655_103973982	3300018431	Grasslands Soil	MKAYLVTTGTIFGLIAVLHLLRAIEERSLLATDPWYFLGMAALGVVAAALSVWAWRLLRLRVRS
Ga0066662_101372643	3300018468	Grasslands Soil	MKAYLITTGTVFGLMATLHVLRSIAEWRLLQTDPWHFFGMAALGLVAAGLSAWAWRLLRLKSRP
Ga0066662_127308612	3300018468	Grasslands Soil	PPLVEPISQQDMTQMKTYLVTTGTLFGMIALMHLVRSIQEWPLLATDPWYFLGSSALGVVAAALSVWAWVLLRLRLRT
Ga0066669_103833011	3300018482	Grasslands Soil	MKAYLVTTGTIFGLIAVLHLLRAIEEWSLLATDPWYFLGMAALGVVAAALSVWAWRLLRLRVRS
Ga0210401_107631652	3300020583	Soil	MKAYLIITGTIFGLLAVWHVLMAIDERHSLTTDPEPFLGMAAMGALAAVLSVWAWRLLARQARS
Ga0210400_111514112	3300021170	Soil	MKAYLIITGSLFGLMALLHLLRGIAEWHSLTTNPGQFLGMAALGVVAAALSVWAWRLFRSSARS
Ga0210388_108139713	3300021181	Soil	MKSYLITTGSIFGLIAIMHFLKAIGDRERMATNPVEFFSMAALGIFAAGLSVWAWRLFRSQSPP
Ga0210391_111295202	3300021433	Soil	MKAYLVTTGTIFGLIAIMHLARAIDEFPAFTTDPVYFLGMAGLGVVAASLSGWAWRLLRRKPTA
Ga0212123_1000059881	3300022557	Iron-Sulfur Acid Spring	MKAYLASTGTIFGLIAVLHLLRSIDERARLATDPWYYLGTSALGVVAAALSVWAWCLLRLQVRT
Ga0208849_11788431	3300025664	Arctic Peat Soil	MKAYLVTTGVLFGLLALMHLARAISEWPSLSADPWYFLGMAGLGLVAACLSGWAWRLLR
Ga0209235_12725491	3300026296	Grasslands Soil	TIFGLIAVLHLLRAIEERSLLATDPWYFLGMAALGVVAAALSVWAWRLLRLRVRS
Ga0179593_10728712	3300026555	Vadose Zone Soil	MKAYLITTGTIFGLLAAMHVVKAIDERHSLTTDPGYFLAMAAMGALAAALSVWAWRLLARQARS
Ga0179587_102498482	3300026557	Vadose Zone Soil	MKAYLITTGTVFSLIAIMHLLRGISERELLTTNPGQFWFMAGLGVFAAGLSVWAWRLLRRTARS
Ga0208042_10941783	3300027568	Peatlands Soil	MLIISPLRKSAMKAYLVITGTLFGLIAVMHLLKSLAERSALATDPWNFLLMSALGVVAAALSVWAWWLLRMQIRK
Ga0208043_10778652	3300027570	Peatlands Soil	MNRGAFCWIQSYESFLVITGALFGLIAVMHLLKSIAERSAFTTDPWYYLGTSALGVVAAALSVWAWWLLRLQFRK
Ga0208044_10144801	3300027625	Peatlands Soil	MLIISPLRKSAMKAYLVITGTLFGLIAVMHLLKSLAELSALATDPWNFLLMSALGVVAAALSVWAWWLLRMQIRK
Ga0208565_100073322	3300027662	Peatlands Soil	NTEKSSTPLAKMLIISPLRKSAMKAYLVITGTLFGLIAVMHLLKSLAERSALATDPWNFLLMSALGVVAAALSVWAWWLLRMQIRK
Ga0209166_100893922	3300027857	Surface Soil	MKSYLITTGTVFGLIAGLHLLKGIEERQQLTTNPGQFWFMAALGVFAACLSVWAWRLLLRSA
Ga0209006_100292276	3300027908	Forest Soil	MKAYIITTGTLFGLIAIMHFLKAISERQQMTTDPWGFFGMAALGLLAAGLSVWASRLLRRQSRS
Ga0247662_10926231	3300028293	Soil	MKAYLITTGSIFGLIAFMHLLRSIAEWHLLTTDPWSFLAMAALGIVAAALSAWAWRLLKVSAVLKRAIKVGENDTA
Ga0265319_11327241	3300028563	Rhizosphere	MKAYLVTTGSIFGLIALLHVLRSVSEWKLLSTHPGEFVAMAALGVVAAALSVWAWRLLWRMTRA
Ga0265338_103285833	3300028800	Rhizosphere	MKAYLITTGTIFGLLALMHLLKAINDRGLLTTNPGEFLPMAALGLLAAGLSGWAWRLLLGQKRS
Ga0265338_107141082	3300028800	Rhizosphere	MKAYLITTGTIFGLLAVWHLLMAINERHSLATDPGYFLGMAAMGALAAALSVWAWRLLARQARS
Ga0311352_105330752	3300029944	Palsa	MKSYLITTGTIFGLIAFMHLLKAIGDREQLASNPVEFFSMAALGVVAAGLSVWAWRLLRSQPRP
Ga0311339_114670751	3300029999	Palsa	MKAYLITTGTIFGLIALLHLARSIAERATFATHPLEFLSMAALGLLSAALSVWAWSLLRRRA
Ga0311344_112762581	3300030020	Bog	MKPYLVITGTLFGLIAVMHLLRSIAERATLTTDPLYFLGMSALGIVAAALSVWAWCLLRLQSRK
Ga0311372_119380652	3300030520	Palsa	MKSYLITTGTIFGLIAFMHLLKAIGDREQLASNPVEFFSMAALGVVAAGLSVWAWRLLRSQPR
Ga0316363_1000052840	3300030659	Peatlands Soil	MKAYLVITGTLFGLIAVMHLLKSLAERSALATDPWNFLLMSALGVVAAALSVWAWWLLRMQIRK
Ga0302325_100673175	3300031234	Palsa	MKAYLITTGVLFGLIAVMHILRAIAEWRLLSTDPGYFLGMGTLGIVAVGLSVWAWRLLRLQTRPRSSEELPPPRR
Ga0302325_101138934	3300031234	Palsa	MKAYLIITGTLFGLIAVMHLLKAIGDRQQMATDPVSFFAMAALGVVAAALSVWAWRLFRLQRRS
Ga0302325_115930421	3300031234	Palsa	MKFYLITTGTIFGLIAVMHLLRSIAEWSMLKTDPGYFLGMSALGIVSAALSVWAWRLLWSPGGR
Ga0302325_126991241	3300031234	Palsa	VFGLIALMHLVRAIDEASTFVSDPRYFLGMAGLGVVAAVLSGRAWGLLRRQAKS
Ga0302324_1024848032	3300031236	Palsa	VKAYLITTGALFGLIAVAHLLKAVDERRQLTTNPGEYLAMAALGVVAAILSVWAWRLLRRQRRP
Ga0302324_1029467181	3300031236	Palsa	AYLITTGTLFGLIAVMHLLKAINDRGQLTTHPGEFLSMAALGVVAAGLSVWAWRLHRAASRK
Ga0302324_1032980522	3300031236	Palsa	MKPYLITTGTIFGLIAVLHLWRAIAEGSMLTTHPAEFLSMAALGVL
Ga0310686_1176680112	3300031708	Soil	MKAYIITTGTIFALIAAMHLWKAILDRSRLATNPGEFLSMAALGLLAAGLAVWALTLLRPRRS
Ga0307474_103794962	3300031718	Hardwood Forest Soil	MKAYLITTGTIFGLLAAMHVVRAIDERHSLTTDPGYFLGMAAMGALAAALSLWAWRLLARQAR
Ga0306925_105397482	3300031890	Soil	MKAYLVTTGLIFGLIAALHLLRDITERSRLATDPWPYLAEAALGLVAAALAVWAWRLFRAQERS
Ga0311301_1002683811	3300032160	Peatlands Soil	MKAYLVITGALFGLIAVMHLLKSIAERSAFTTDPWYYLGTSALGVVAAALSVWAWWLLRLQFRK
Ga0335085_112504762	3300032770	Soil	MKAYLITTGVLFGLLALMHLVRAIDEAHFLLTDPKYFLGMAGLGVVAAFLSGWAFRLL
Ga0335078_101742872	3300032805	Soil	MKAYIITTGTLFGLIAIMHLLKAIEDRQQMTTDPWSFFGMAALGLLAAGLSAWAWRLLRRQNRL
Ga0335071_112383011	3300032897	Soil	MKAYLLVTGTLFGLIAIAHFLKSIAQRDQLATAPGSFLAMAALGVLAAALSVRAWCLLRKTGKH
Ga0335083_104412222	3300032954	Soil	MKAYLITTGVLFGLLALMHLVRAIDEAHFLLTDPKYFLGMAGLGVVAAFLSGWAFRLLRKQARS
Ga0310810_100284423	3300033412	Soil	MKAYLLTSGTIFGVIAILHGLRSIFEWRLLTTDPVSFLGMAALGVLAAVLSAWAWRLFARATRL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064542

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences