Metagenome / Metatranscriptome Family F064605

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064605
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	54 residues
Representative Sequence	MRVIDLDTGDTLQAANDDDLRKAVAGFYEDRNEPMSEDDVAQLVERRAYDATDS
Number of Associated Samples	97
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.74 %
% of genes near scaffold ends (potentially truncated)	29.69 %
% of genes from short scaffolds (< 2000 bps)	90.62 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.656 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.938 % of family members)
Environment Ontology (ENVO)	Unclassified (31.250 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.094 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.70% β-sheet: 0.00% Coil/Unstructured: 46.30%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00456	Transketolase_N	53.12
PF02502	LacAB_rpiB	29.69
PF00480	ROK	8.59
PF02779	Transket_pyr	5.47
PF00923	TAL_FSA	0.78
PF06974	WS_DGAT_C	0.78
PF01053	Cys_Met_Meta_PP	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	53.12
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	53.12
COG0698	Ribose 5-phosphate isomerase RpiB	Carbohydrate transport and metabolism [G]	29.69
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	17.19
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.78
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.78
COG0176	Transaldolase/fructose-6-phosphate aldolase	Carbohydrate transport and metabolism [G]	0.78
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.78
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.78
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.78
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.78
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.78
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.78
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.78
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.66 %
Unclassified	root	N/A	27.34 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.66 %
Unclassified	root	N/A	27.34 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.66 %
Unclassified	root	N/A	27.34 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	46.09 %
Unclassified	root	N/A	27.34 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	45.31 %
Unclassified	root	N/A	27.34 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.56 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	39.84 %
Unclassified	root	N/A	27.34 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.34 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.56 %
Betaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis	0.78 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	39.06 %
Unclassified	root	N/A	27.34 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.34 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.56 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples	0.78 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.34 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	18.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.34 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.56 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	0.78 %
Candidatus Accumulibacter adjunctus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter adjunctus	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.34 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	18.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.34 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.56 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	0.78 %
Candidatus Accumulibacter adjunctus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter adjunctus	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.34 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	11.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.34 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.56 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	0.78 %
Candidatus Accumulibacter adjunctus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter adjunctus	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.34 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	7.03 %
Solirubrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	4.69 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.34 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.56 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	0.78 %
Candidatus Accumulibacter adjunctus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter adjunctus	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001205\|C688J13580_1007273	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300001205\|C688J13580_1020648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	793	Open in IMG/M
3300001305\|C688J14111_10036946	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300001305\|C688J14111_10056551	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300001686\|C688J18823_10086446	Not Available	2176	Open in IMG/M
3300001686\|C688J18823_10171011	Not Available	1482	Open in IMG/M
3300001686\|C688J18823_10842970	Not Available	582	Open in IMG/M
3300002075\|JGI24738J21930_10130826	Not Available	550	Open in IMG/M
3300002568\|C688J35102_118484264	Not Available	564	Open in IMG/M
3300002568\|C688J35102_119844696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	791	Open in IMG/M
3300002568\|C688J35102_120534849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	1154	Open in IMG/M
3300002568\|C688J35102_120822607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1696	Open in IMG/M
3300002568\|C688J35102_120983778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	5556	Open in IMG/M
3300003267\|soilL1_10067704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1176	Open in IMG/M
3300004081\|Ga0063454_100054032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1623	Open in IMG/M
3300004463\|Ga0063356_100832924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	1292	Open in IMG/M
3300004463\|Ga0063356_102080051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	861	Open in IMG/M
3300004479\|Ga0062595_101047640	Not Available	707	Open in IMG/M
3300004643\|Ga0062591_102915156	Not Available	507	Open in IMG/M
3300005093\|Ga0062594_100998202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	804	Open in IMG/M
3300005329\|Ga0070683_100075809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3143	Open in IMG/M
3300005332\|Ga0066388_105414764	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300005338\|Ga0068868_100215251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1607	Open in IMG/M
3300005343\|Ga0070687_100566069	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300005354\|Ga0070675_100602151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	997	Open in IMG/M
3300005354\|Ga0070675_100806307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	858	Open in IMG/M
3300005355\|Ga0070671_100585473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	964	Open in IMG/M
3300005355\|Ga0070671_101992034	Not Available	517	Open in IMG/M
3300005365\|Ga0070688_100885786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	703	Open in IMG/M
3300005406\|Ga0070703_10048685	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300005440\|Ga0070705_100273846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1197	Open in IMG/M
3300005455\|Ga0070663_100331049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1228	Open in IMG/M
3300005539\|Ga0068853_100265732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	1578	Open in IMG/M
3300005539\|Ga0068853_101997021	Not Available	562	Open in IMG/M
3300005546\|Ga0070696_101891301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	517	Open in IMG/M
3300005719\|Ga0068861_100975485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	807	Open in IMG/M
3300006058\|Ga0075432_10227904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	748	Open in IMG/M
3300006755\|Ga0079222_11779527	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	595	Open in IMG/M
3300006953\|Ga0074063_12558644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	676	Open in IMG/M
3300009093\|Ga0105240_11243061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	787	Open in IMG/M
3300009094\|Ga0111539_12942170	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300009148\|Ga0105243_10159785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1942	Open in IMG/M
3300009156\|Ga0111538_12974927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	592	Open in IMG/M
3300009553\|Ga0105249_12764817	Not Available	562	Open in IMG/M
3300009789\|Ga0126307_10578090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	907	Open in IMG/M
3300009840\|Ga0126313_10004861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	7974	Open in IMG/M
3300009840\|Ga0126313_11820404	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300010039\|Ga0126309_10046393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2058	Open in IMG/M
3300010039\|Ga0126309_10813873	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300010040\|Ga0126308_10857545	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300010045\|Ga0126311_10886485	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300010337\|Ga0134062_10377499	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300010360\|Ga0126372_11388120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	734	Open in IMG/M
3300010371\|Ga0134125_11146107	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300010371\|Ga0134125_12959983	Not Available	515	Open in IMG/M
3300010400\|Ga0134122_11873757	Not Available	634	Open in IMG/M
3300010401\|Ga0134121_12293325	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300011332\|Ga0126317_10914931	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300012212\|Ga0150985_106374165	Not Available	511	Open in IMG/M
3300012469\|Ga0150984_108813796	Not Available	605	Open in IMG/M
3300012903\|Ga0157289_10402609	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	515	Open in IMG/M
3300012915\|Ga0157302_10421657	Not Available	556	Open in IMG/M
3300012957\|Ga0164303_10674277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	693	Open in IMG/M
3300012998\|Ga0157362_1065181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1957	Open in IMG/M
3300013105\|Ga0157369_11850366	Not Available	613	Open in IMG/M
3300013308\|Ga0157375_11967194	Not Available	695	Open in IMG/M
3300014487\|Ga0182000_10172636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	803	Open in IMG/M
3300014488\|Ga0182001_10259341	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300014497\|Ga0182008_10612106	Not Available	613	Open in IMG/M
3300015371\|Ga0132258_13929554	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300017792\|Ga0163161_11604351	Not Available	574	Open in IMG/M
3300017965\|Ga0190266_11216631	Not Available	523	Open in IMG/M
3300018465\|Ga0190269_11846256	Not Available	518	Open in IMG/M
3300019356\|Ga0173481_10084367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1183	Open in IMG/M
3300019356\|Ga0173481_10245455	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300020082\|Ga0206353_10411263	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300021184\|Ga0196959_10139368	Not Available	587	Open in IMG/M
3300022467\|Ga0224712_10196491	Not Available	915	Open in IMG/M
3300024055\|Ga0247794_10237238	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300024430\|Ga0196962_10016549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter adjunctus	2206	Open in IMG/M
3300025321\|Ga0207656_10055841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1720	Open in IMG/M
3300025321\|Ga0207656_10313847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	778	Open in IMG/M
3300025908\|Ga0207643_10255513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1080	Open in IMG/M
3300025909\|Ga0207705_11383664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	535	Open in IMG/M
3300025914\|Ga0207671_10414242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1072	Open in IMG/M
3300025921\|Ga0207652_10598808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	989	Open in IMG/M
3300025931\|Ga0207644_11045476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	686	Open in IMG/M
3300025935\|Ga0207709_10784622	Not Available	768	Open in IMG/M
3300025961\|Ga0207712_11634514	Not Available	577	Open in IMG/M
3300026067\|Ga0207678_10340315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1293	Open in IMG/M
3300026095\|Ga0207676_10252115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1589	Open in IMG/M
3300026535\|Ga0256867_10068853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1400	Open in IMG/M
3300027616\|Ga0209106_1098112	Not Available	657	Open in IMG/M
3300027636\|Ga0214469_1021262	Not Available	2175	Open in IMG/M
3300027636\|Ga0214469_1186288	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300027647\|Ga0214468_1084835	All Organisms → cellular organisms → Bacteria → Terrabacteria group	807	Open in IMG/M
3300028381\|Ga0268264_10740795	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300028587\|Ga0247828_10091029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1424	Open in IMG/M
3300028744\|Ga0307318_10027932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1833	Open in IMG/M
3300030006\|Ga0299907_10540262	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300030336\|Ga0247826_10365752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1055	Open in IMG/M
3300030336\|Ga0247826_11719807	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300030619\|Ga0268386_10780131	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300030619\|Ga0268386_10918609	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300031152\|Ga0307501_10044749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	968	Open in IMG/M
3300031152\|Ga0307501_10226568	Not Available	546	Open in IMG/M
3300031228\|Ga0299914_10046371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3698	Open in IMG/M
3300031228\|Ga0299914_10100381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2540	Open in IMG/M
3300031228\|Ga0299914_10547741	Not Available	994	Open in IMG/M
3300031228\|Ga0299914_10974286	Not Available	694	Open in IMG/M
3300031229\|Ga0299913_10816853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	905	Open in IMG/M
3300031229\|Ga0299913_11835482	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300031731\|Ga0307405_10896810	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300031903\|Ga0307407_10743381	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300031938\|Ga0308175_100250207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1778	Open in IMG/M
3300031938\|Ga0308175_101750777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	696	Open in IMG/M
3300031938\|Ga0308175_102244993	Not Available	612	Open in IMG/M
3300031995\|Ga0307409_100410113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1297	Open in IMG/M
3300031995\|Ga0307409_100595776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1092	Open in IMG/M
3300031995\|Ga0307409_102265218	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300031995\|Ga0307409_102698204	Not Available	525	Open in IMG/M
3300032074\|Ga0308173_10839438	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300032126\|Ga0307415_101299584	Not Available	689	Open in IMG/M
3300032174\|Ga0307470_11023049	Not Available	659	Open in IMG/M
3300032205\|Ga0307472_100374327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1180	Open in IMG/M
3300034268\|Ga0372943_0033940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2785	Open in IMG/M
3300034268\|Ga0372943_0061593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2122	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.62%
Host-Associated	Host-Associated	34.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.84%
Plants	Host-Associated → Plants	33.59%
Aquatic	Environmental → Aquatic	0.78%
Fungi	Host-Associated → Fungi	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.72%
Freshwater	Environmental → Aquatic → Freshwater	0.78%
Mycelium	Host-Associated → Fungi → Mycelium	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.31%
Loam	Environmental → Terrestrial → Soil → Loam	17.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.16%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.03%
Sand	Environmental → Terrestrial → Soil → Sand	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.56%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.78%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.84%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	10.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.16%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	7.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.03%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.47%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.56%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.78%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	10.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	7.03%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	5.47%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.34%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.56%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.56%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.56%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.56%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.78%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.78%
Fungus Garden	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Fungus Garden	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001205	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012998	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta laevigata ALBM3	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027636	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57 HiSeq	Environmental	Open in IMG/M
3300027647	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 HiSeq	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J13580_10072732	3300001205	Soil	MRVIDLDTGDTLQAANDDDLKKAVAGFYEDRNEPLAEDDVAQLVERRAYDATDS*
C688J13580_10206483	3300001205	Soil	MRVIDLDTGDTLQAANDDDXRKAVAGFYADRNEPMSEDDVAQLVDRRAYDATDS*
C688J14111_100369462	3300001305	Soil	MRVIDLDTGDTLQAANDDDLKKAVAGFYEDRNEPLGEDDVAQLVERRAYDATDS*
C688J14111_100565513	3300001305	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRNEPMSEDDVAQLVERRAYDATDS*
C688J18823_100864461	3300001686	Soil	LRRLMRVIDLDTGDTLQAANDDDLRKAVAGFYADRNEPMSEDDVAQLVDRRAYDATDS*
C688J18823_101710112	3300001686	Soil	GRLRRLMRVIDLDTGDTLQAANDDDLRKAVAGFYADRNEPMGEDDVAQLVERRAYDATDS
C688J18823_108429701	3300001686	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRNEPMGEDDVAQLIERRAYDATDS*
JGI24738J21930_101308261	3300002075	Corn Rhizosphere	GDTLQAANDDDLRKAVAGFYEDRNEPMNEDDVAQLVERRAYDATDS*
C688J35102_1184842641	3300002568	Soil	VIDLDTGDTLQAANDDDLRKAVAGFYADRNEPMGEDDVAQLVERRAYDATDS*
C688J35102_1198446962	3300002568	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRNEPLSDDDAAQLVERRAYDATDS*
C688J35102_1205348492	3300002568	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYEERGEPMSEDDVAQLVERRAYDATDS*
C688J35102_1208226072	3300002568	Soil	MRVIDLDTGDTLQAANDDDLRKAVVGFYADRNEPMSEDDVAQLVDRRAYDATDS*
C688J35102_1209837785	3300002568	Soil	MRVIDLDTGDTLQAANDDDLKKAVAGFYQDRNEPMSEGDVAQLVERRAYDATDS*
soilL1_100677041	3300003267	Sugarcane Root And Bulk Soil	MRVIDLDTGDTLQAANDDDLRKAVVRHYEERNEPMSEEDVARLIERRAYDATDS*
Ga0063454_1000540323	3300004081	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRNEPMSEDDVAQLVERRAYDATDS
Ga0063356_1008329242	3300004463	Arabidopsis Thaliana Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYEDRNEPMSEDDVAQLVERRAYDATDS*
Ga0063356_1020800511	3300004463	Arabidopsis Thaliana Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRNEPMSEDDVAQLIERRAYDATDS*
Ga0062595_1010476401	3300004479	Soil	MRVIDLDTGDTLQAANDDDLKKAVAGFYEERNEPMGEDDVAQLVERRAYDATDS*
Ga0062591_1029151562	3300004643	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYEERGEPMGEDDVAQLVERRAYDATDS*
Ga0062594_1009982023	3300005093	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYAERNEPMSEDDVAQLVERRAYDATDS*
Ga0070683_1000758092	3300005329	Corn Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYEERNEPMSEDDVAQLVERRAYDATDS*
Ga0066388_1054147642	3300005332	Tropical Forest Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYEERNEPMGEDDVAQLVERRAYDATDS*
Ga0068868_1002152513	3300005338	Miscanthus Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRHEPMSDDDVAQLVDRRAYDATDS*
Ga0070687_1005660691	3300005343	Switchgrass Rhizosphere	RRLMRVIDLDTGDTLQAANDDDLRKAVAGFYEDRAEPMNEDDVAQLVERRAYDATDS*
Ga0070675_1006021511	3300005354	Miscanthus Rhizosphere	RRLMRVIDLDTGDTLQAANDDDLRKAVAGFYEDRNEPMNEDDVAQLVERRAYDATDS*
Ga0070675_1008063073	3300005354	Miscanthus Rhizosphere	MRVIDLDTGDTLQAANDDDLKKAVAGFLADRNEPLSDDDVAQLVERRAYDATDS*
Ga0070671_1005854732	3300005355	Switchgrass Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYEDRNEPMNEDDVARLVERRAYDATDS*
Ga0070671_1019920341	3300005355	Switchgrass Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRNEPMGEDDVAQLVERRAYDATDS*
Ga0070688_1008857862	3300005365	Switchgrass Rhizosphere	MRVIDLDTGDTLQAANDDDLKKAVAGFFADRNEPLSDDDVAQLVERRAYDATDS*
Ga0070703_100486852	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYEDRNEPMNEDDVAQLVERRAYDATDS*
Ga0070705_1002738461	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYEDRHEPMNEDDVAQLVERRAYDATDS*
Ga0070663_1003310491	3300005455	Corn Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYEDRNEPMNEDDVAQLVE
Ga0068853_1002657322	3300005539	Corn Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYEDRAEPMNEDDVAQLVERRAYDATDS*
Ga0068853_1019970212	3300005539	Corn Rhizosphere	MRVIDLDTGDTLQAANDDDLKKAVAGFFADRNEPLSDDDVAQLVERRAYDATD
Ga0070696_1018913012	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRVIDLDTGDTLPAANDDDLRKAVAGFYADRNEPMSEDDVAQLIERRAYDATDS*
Ga0068861_1009754853	3300005719	Switchgrass Rhizosphere	MRVIDLDTGDTLQAANDDDLKKAVAGFFADRNEPLSDDDVAQLVE
Ga0075292_10408992	3300005887	Rice Paddy Soil	MRVIDLDTGDTLQAANDEDLVRAVRGFYEDRGEPIAEEDAARLVSDRAYEAGDA*
Ga0075432_102279042	3300006058	Populus Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYEDRNEPMTEDDVAQLVERRAYDATDS*
Ga0079222_117795271	3300006755	Agricultural Soil	MRVIDLDTGDTLQAANDDDLKKAVAGFYQDRNEPMSTDDVAQLVERRAYDATDS*
Ga0074063_125586442	3300006953	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYEDRHEPMNEDDVAQLIERRAYDATDS*
Ga0105240_112430612	3300009093	Corn Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRNEPMSDDDVAQLIERRAYDATDS*
Ga0111539_129421701	3300009094	Populus Rhizosphere	DLDTGDTLQAANDDDLRKAVAGFYADRNEPMSEDDVAQLIERRAYDATDS*
Ga0105243_101597853	3300009148	Miscanthus Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYDERNEPMGEDDVAQLVARRAYDATDS*
Ga0111538_129749272	3300009156	Populus Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYEERHEPMSEDDVAQLVERRAYDATDS*
Ga0105249_127648172	3300009553	Switchgrass Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYEERSEPMGEDDVAQLVERRAYDATDS*
Ga0126307_105780901	3300009789	Serpentine Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRTEPMSEDDVAQLVERRAYVATYS*
Ga0126313_100048615	3300009840	Serpentine Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRTEPMSEDDVAQLVERRAYDATDS*
Ga0126313_118204042	3300009840	Serpentine Soil	GKDRRHGTGRLRRLMRVIDLDTGDTLQAANDDDLKKAVAGFYGDRNEPMSDDDVAQLVERRAYDATDS*
Ga0126309_100463933	3300010039	Serpentine Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRNEPMSDDDVAQLVDRRAYDATDS*
Ga0126309_108138732	3300010039	Serpentine Soil	MRVIDLDTGDTLQAANDDDLKKAVAGFYSDRNEPMSDDDVAQLVERRAYDATDS*
Ga0126308_108575452	3300010040	Serpentine Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRTEPMSEDDVAQLVERRAYVATYT*
Ga0126311_108864852	3300010045	Serpentine Soil	MRVIDLDTGDTLQAANDDDLKKAVAGFYADRNEPMSDDDVAQLVDRRAYDATDS*
Ga0134062_103774992	3300010337	Grasslands Soil	KEDEPMRVIDLDTGETLQAANDDDLRKVVARWASEQDRKLSDDEIAQLVESRAYDATDS*
Ga0126372_113881203	3300010360	Tropical Forest Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYEERNEPMGEDDVAQLVER
Ga0134125_111461071	3300010371	Terrestrial Soil	RSVMRVIDLDTGDTLQAANDDDLKKAVAGFYDDRNEPMGEDDVAQLVKRRAYDATDS*
Ga0134125_129599832	3300010371	Terrestrial Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYEERGEPMSEADVAQLVERRAYDATDS*
Ga0134122_118737572	3300010400	Terrestrial Soil	DTGDTLQAANDDDLRKAVAGFYEDRNEPMNEDDVAQLVERRAYDATDS*
Ga0134121_122933252	3300010401	Terrestrial Soil	MRVIDLDTGDTLQAANDDDLEKAVAGFYADRNEPLSDDDVAQLVERRAYDATDS*
Ga0126317_109149312	3300011332	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRSEPMSDDDVAQLVERRAYDATDS*
Ga0150985_1063741651	3300012212	Avena Fatua Rhizosphere	DLDTGDTLQAANDDDLTKAVAGFYADRNEPLSDDDAAQLVERRAYDATDS*
Ga0150984_1088137962	3300012469	Avena Fatua Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVVGFYADRNEPMSEDDVAQLIERRAYDATDS*
Ga0157289_104026092	3300012903	Soil	GKDRRHGTGRLRRLMRVIDLDTGDTLQAANDDDLRKAVAGFYADRDEPMSEDDVAQLIERRAYDATDS*
Ga0157302_104216572	3300012915	Soil	MRVIDLDTGDTLQAANDDDLARAVKRFYEGRGESMSDDAAAALVSERAY
Ga0164303_106742772	3300012957	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYEDRHEPMKEDDVAQLVERRAYDATDS*
Ga0157362_10651812	3300012998	Fungus Garden	MRVIDLDTGETLQAANDDDLRKVVARWASEHDRELSDDDIAQLVERRAYDATDS*
Ga0157369_118503662	3300013105	Corn Rhizosphere	MRVIDLDTGDTLQAANDDDLRTAVAGFYEDRNEPMNEDDVAQLVERRAYDATDS*
Ga0157375_119671942	3300013308	Miscanthus Rhizosphere	DLDTGDTLQAANDDDLRKAVAGFYEDRAEPMDEDDVAQLIERRAYDATDS*
Ga0182000_101726362	3300014487	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYEERNEPMSEDDVAQLVDRRAYDATDS*
Ga0182001_102593412	3300014488	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRNEPMSDDDVAQLVERRAYDATDS*
Ga0182008_106121062	3300014497	Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVVGFYADRNEPMSDDDVAQLVDRRAYDATDS*
Ga0132258_139295542	3300015371	Arabidopsis Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYADMGETWSDEDVATLVERRAYDATDS*
Ga0163161_116043511	3300017792	Switchgrass Rhizosphere	LMRVIDLDTGDTLQAANDDDLRKAVAGFYDERNEPMGEDDVAQLVARRAYDATDS
Ga0190266_112166311	3300017965	Soil	LMRVIDLDTGDTLQAANDDDLRKVVAGFYEERNEPMSEDDVAQLVERRAYDATDS
Ga0190269_118462561	3300018465	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRNEPMTEDDVAQLVDRRAYDAIYS
Ga0173481_100843672	3300019356	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYEERGEPMGEDDVAQLVERRAYDATDS
Ga0173481_102454552	3300019356	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRNEPLGEDDVAQLVERRAYDATDS
Ga0206353_104112632	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYEDRNEPMNEDDVAQLVERRAYDATDS
Ga0196959_101393681	3300021184	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRNEPMSDDEVARLVERRAYDATDS
Ga0224712_101964912	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRNEPMSEQDVAQLVKRRAYDATDS
Ga0247794_102372382	3300024055	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRNEPMSEDDVAQLIERRAYDATDS
Ga0196962_100165492	3300024430	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYAERDEPMSEDDVAHLVERRAYDATDS
Ga0207656_100558411	3300025321	Corn Rhizosphere	RRLMRVIDLDTGDTLQAANDDDLRKAVAGFYEDRNEPMNEDDVAQLVERRAYDATDS
Ga0207656_103138472	3300025321	Corn Rhizosphere	MRVIDLDTGDTLQAANDDDLKKAVAGFFADRNEPLSDDDVAQLVERRAYDATDS
Ga0207643_102555133	3300025908	Miscanthus Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYEDRNEPMNEDDVARLVERRAYDATDS
Ga0207705_113836642	3300025909	Corn Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYEERHEPMSEDDVAQLVERRAYDATDS
Ga0207671_104142423	3300025914	Corn Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYEDRAEPMNEDDVAQLVERRAYDATDS
Ga0207652_105988082	3300025921	Corn Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYEERNEPMSEDDVAQLVERRAYDATDS
Ga0207644_110454762	3300025931	Switchgrass Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRNEPMGEDDVAQLVERRAYDATDS
Ga0207709_107846222	3300025935	Miscanthus Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYDERNEPMGEDDVAQLVARRAYDATDS
Ga0207712_116345142	3300025961	Switchgrass Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRHEPMSDDDVAQLVDRRAYDATDS
Ga0207678_103403151	3300026067	Corn Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYEDRHEPMNEDDVAQLVER
Ga0207676_102521153	3300026095	Switchgrass Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYEERHEPMSEDDVAQLVERR
Ga0256867_100688532	3300026535	Soil	MRVIDLDTGDTLQAANDTDLADAVRGYYTERGESLSDEDAARLVDDRAYEATDS
Ga0209106_10981122	3300027616	Forest Soil	MRVIDLDTGDTLQAANDDDLRKSVVGFYEERNEPMSEDDVAQLVERRAYDATDS
Ga0214469_10212623	3300027636	Soil	MRVIDLDTGDTLQAANDADLARAVRGYYEDRGEPLSDEDAARLVDSRAYEATDS
Ga0214469_11862882	3300027636	Soil	MRVIDLDTGDTLQAANDADLIKAVRGYYEQRGEAFTDADAAGLVRTRAYDATDS
Ga0214468_10848351	3300027647	Soil	MRVIDLDTGDTLQAANDADLARAVRGYYEDRGEPLSDEDAARLVDSRAY
Ga0268264_107407952	3300028381	Switchgrass Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYAERNEPMSEDDVAQLVERRAYDATDS
Ga0247828_100910292	3300028587	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRNEPMSDDDVAQLIERRAYDATDS
Ga0307318_100279323	3300028744	Soil	MRVIDLDTGDTLQAANDDDLRKAVVGFYADRNEPMSEDDVAQLVDRRAYDATDS
Ga0299907_105402622	3300030006	Soil	ILDHERNVTAAMRVIDLDTGDTLQAANDADLIKAVRGYYEQRGEAFTDADAAGLVRTRAYDATDS
Ga0247826_103657523	3300030336	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYEERSEPMGEDDVAQLVERRAYDATDS
Ga0247826_117198072	3300030336	Soil	TLQAANDDDLRKAVAGFYADRGEPMSADDVAQLVERRAYDATDS
Ga0268386_107801312	3300030619	Soil	ADTPVLSAPTHGCILDHERNVTAAMRVIDLDTGDTLQAANDADLIKAVRGYYEQRGEAFTDADAAGLVRTRAYDATDS
Ga0268386_109186091	3300030619	Soil	LSVPTHGCILDHERNVTAAMRVIDLDTGDTLQAANDADLIKAVRSYYEKRGEAFSDADAAGLVRTRAYDATDS
Ga0307501_100447492	3300031152	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYEERSEPLSEDDVAQLVERRAYDATDS
Ga0307501_102265682	3300031152	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRNEPMSEDDVAGLVERRAYDATDS
Ga0299914_100463713	3300031228	Soil	MRVIDLDTGDTLQAANDADLIKAVRGYYEQRGEAFTDADAARLVRTRAYDATDS
Ga0299914_101003812	3300031228	Soil	VTAAMRVIDLDTGDTLQAANDADLIKAVRSYYEKRGEAFSDADAAGLVRTRAYDATDS
Ga0299914_105477411	3300031228	Soil	HERNVTAAMRVIDLDTGDTLQAANDADLIKAVRGYYEQRGEAFSDADAAGLVRTRAYDATDS
Ga0299914_109742862	3300031228	Soil	IDLDSGDTLQAANDADPTTAERGYCAERGEPFSDEEAADLDSVRAYDATDS
Ga0299913_108168532	3300031229	Soil	VTAAMRVIDLDTGDTLQAANDADLIKAVRGYYEQRGEAFTDADAAGLVRTRAYDATDS
Ga0299913_118354822	3300031229	Soil	DTGDTLQAANDADLIKAVRGYYEQRGEAFSDADAAGLVRTRAYDATDS
Ga0307405_108968102	3300031731	Rhizosphere	MRVIDLDTGDTLQAANDDDLKKAVAGFYSDRNEPLSDDDVAQLVERRAYDATDS
Ga0307407_107433812	3300031903	Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRNEPMSEDDIAQLVERRAYDATDS
Ga0308175_1002502073	3300031938	Soil	MRVIDLDTGDTLQAANDDDLKKAVSGFYEDRNEPMSADDVAQLVERRAYDATDS
Ga0308175_1017507772	3300031938	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYEERNEPMSDEDVAQLIERRAYDATDS
Ga0308175_1022449931	3300031938	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYADRNEPMGEDDVAQLIERRAYDATDS
Ga0307409_1004101132	3300031995	Rhizosphere	MRVIDLDTGDTLQAANDEDLRKAVAGFYADRNEPMSEDDVAQLVERRAYDATDS
Ga0307409_1005957762	3300031995	Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYANRNEPMSEDDVAQLIERRAYDATDS
Ga0307409_1022652182	3300031995	Rhizosphere	TGDTLQAANDDDLRKAVAGFYADRNEPMSEDDVAQLVERRAYDATDS
Ga0307409_1026982041	3300031995	Rhizosphere	MRVIDLDTGDTLQAANDDDLKKAVAGFYSDRNEPLSDDDVAQLVERRAY
Ga0308173_108394382	3300032074	Soil	GRLRSVMRVIDLDTGDTLQAANDDDLKKAVSGFYEDRNEPMSADDVAQLVERRAYDATDS
Ga0307415_1012995841	3300032126	Rhizosphere	MRVIDLDTGDTLQAANDDDLRKAVAGFYAERNEPMSEDDVAQLIERRAYDATDS
Ga0307470_110230492	3300032174	Hardwood Forest Soil	LATGGLRRLMRVIDLDTGDTLQAANDDDLRKAVAGFYDERDEPMGEDDVAQLVERRAYDATDS
Ga0307472_1003743273	3300032205	Hardwood Forest Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYEDRHEPMNEDDVAQLVERRAYDATDS
Ga0372943_0033940_2453_2617	3300034268	Soil	MRVIDLDTGDTLQAANDDDLRKAVAGFYTDRNEPMSEDDVAQLVERRAYDATDS
Ga0372943_0061593_1109_1273	3300034268	Soil	MRVIDLDTGDTLQAANDDDLRKAVAQHYADRSEPMSDDDVAQLIERRAYDATDS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064605

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences