Metagenome / Metatranscriptome Family F064674

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064674
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	65 residues
Representative Sequence	PGPSAAELRIAELERLLGRKQLEVDFLKRAFEQVRGAAPNRTSDGGKESIAASKSRSRSKE
Number of Associated Samples	98
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	3.12 %
% of genes near scaffold ends (potentially truncated)	96.88 %
% of genes from short scaffolds (< 2000 bps)	96.09 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (42.969 % of family members)
Environment Ontology (ENVO)	Unclassified (35.156 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.906 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.08% β-sheet: 0.00% Coil/Unstructured: 62.92%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF13276	HTH_21	58.59
PF13683	rve_3	35.94
PF01381	HTH_3	0.78
PF04226	Transgly_assoc	0.78
PF01047	MarR	0.78
PF01527	HTH_Tnp_1	0.78
PF00561	Abhydrolase_1	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
cellular organisms	root	All Organisms → cellular organisms	49.22 %
Viruses	superkingdom	All Organisms → Viruses	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	11.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.25 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.25 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.56 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	2.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.78 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Skermanella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella	2.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.78 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Skermanella stibiiresistens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella stibiiresistens	2.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.78 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Skermanella stibiiresistens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella stibiiresistens	2.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Mycobacterium simiae complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex	0.78 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Skermanella stibiiresistens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella stibiiresistens	2.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Mycobacterium heidelbergense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium heidelbergense	0.78 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908035\|B3_GZOS_CLC_ConsensusfromContig114803	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300001084\|JGI12648J13191_1031436	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300001131\|JGI12631J13338_1010970	Not Available	1189	Open in IMG/M
3300001175\|JGI12649J13570_1022323	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300001461\|JGI12698J15209_1003209	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	901	Open in IMG/M
3300001565\|A35518A_1019251	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300001593\|JGI12635J15846_10168600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1481	Open in IMG/M
3300001593\|JGI12635J15846_10229692	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300001593\|JGI12635J15846_10520634	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300001593\|JGI12635J15846_10670700	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300004080\|Ga0062385_11127019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella stibiiresistens	533	Open in IMG/M
3300004091\|Ga0062387_101737212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella stibiiresistens	508	Open in IMG/M
3300004092\|Ga0062389_103015986	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300005921\|Ga0070766_10506605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300005950\|Ga0066787_10144257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella stibiiresistens	536	Open in IMG/M
3300006638\|Ga0075522_10281571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	811	Open in IMG/M
3300006893\|Ga0073928_10013656	All Organisms → cellular organisms → Bacteria	9092	Open in IMG/M
3300009038\|Ga0099829_11014303	Not Available	688	Open in IMG/M
3300009500\|Ga0116229_10440330	Not Available	1084	Open in IMG/M
3300009624\|Ga0116105_1154788	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300009709\|Ga0116227_10409311	All Organisms → Viruses → Predicted Viral	1033	Open in IMG/M
3300009759\|Ga0116101_1076280	Not Available	754	Open in IMG/M
3300010343\|Ga0074044_10657205	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300014169\|Ga0181531_10987358	Not Available	529	Open in IMG/M
3300014495\|Ga0182015_10650696	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300018037\|Ga0187883_10161671	Not Available	1151	Open in IMG/M
3300018042\|Ga0187871_10156111	Not Available	1288	Open in IMG/M
3300019786\|Ga0182025_1262285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1639	Open in IMG/M
3300021086\|Ga0179596_10286520	Not Available	819	Open in IMG/M
3300021170\|Ga0210400_10674045	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300021181\|Ga0210388_10351786	Not Available	1295	Open in IMG/M
3300021181\|Ga0210388_10377878	Not Available	1246	Open in IMG/M
3300021181\|Ga0210388_10455225	Not Available	1124	Open in IMG/M
3300021181\|Ga0210388_11337789	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300021404\|Ga0210389_10916602	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300021406\|Ga0210386_10600920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium heidelbergense	950	Open in IMG/M
3300021407\|Ga0210383_10450263	Not Available	1112	Open in IMG/M
3300021433\|Ga0210391_10833277	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300021477\|Ga0210398_10518730	Not Available	970	Open in IMG/M
3300022840\|Ga0224549_1014776	Not Available	1106	Open in IMG/M
3300024176\|Ga0224565_1022285	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300025414\|Ga0208935_1029029	Not Available	732	Open in IMG/M
3300025664\|Ga0208849_1098626	Not Available	811	Open in IMG/M
3300027029\|Ga0208731_1023148	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300027164\|Ga0208994_1033359	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300027432\|Ga0209421_1055611	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300027575\|Ga0209525_1030737	Not Available	1326	Open in IMG/M
3300027575\|Ga0209525_1117017	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300027609\|Ga0209221_1024250	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300027648\|Ga0209420_1189460	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300027701\|Ga0209447_10022025	All Organisms → cellular organisms → Bacteria	1789	Open in IMG/M
3300027727\|Ga0209328_10063420	Not Available	1132	Open in IMG/M
3300027783\|Ga0209448_10260114	Not Available	572	Open in IMG/M
3300027879\|Ga0209169_10077121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1722	Open in IMG/M
3300027889\|Ga0209380_10293503	Not Available	955	Open in IMG/M
3300027889\|Ga0209380_10335740	Not Available	888	Open in IMG/M
3300028047\|Ga0209526_10149542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1635	Open in IMG/M
3300028731\|Ga0302301_1146409	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300028775\|Ga0302231_10346302	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300028781\|Ga0302223_10251364	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300028795\|Ga0302227_10030457	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2711	Open in IMG/M
3300028798\|Ga0302222_10092745	Not Available	1205	Open in IMG/M
3300028798\|Ga0302222_10210830	Not Available	759	Open in IMG/M
3300028806\|Ga0302221_10106681	Not Available	1241	Open in IMG/M
3300028806\|Ga0302221_10139402	Not Available	1069	Open in IMG/M
3300028806\|Ga0302221_10504926	Not Available	527	Open in IMG/M
3300028808\|Ga0302228_10117159	Not Available	1240	Open in IMG/M
3300028863\|Ga0302218_10144074	Not Available	754	Open in IMG/M
3300028871\|Ga0302230_10159248	Not Available	883	Open in IMG/M
3300029636\|Ga0222749_10813489	Not Available	511	Open in IMG/M
3300029939\|Ga0311328_10429109	Not Available	943	Open in IMG/M
3300029943\|Ga0311340_10479757	Not Available	1117	Open in IMG/M
3300029943\|Ga0311340_11422522	Not Available	547	Open in IMG/M
3300029944\|Ga0311352_10100750	All Organisms → cellular organisms → Bacteria	2546	Open in IMG/M
3300029951\|Ga0311371_12536517	Not Available	520	Open in IMG/M
3300029951\|Ga0311371_12560135	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300029955\|Ga0311342_10862661	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300029999\|Ga0311339_11340645	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300030007\|Ga0311338_10448234	Not Available	1369	Open in IMG/M
3300030007\|Ga0311338_11365760	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300030007\|Ga0311338_11595159	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300030042\|Ga0302300_1161942	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300030054\|Ga0302182_10065832	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300030054\|Ga0302182_10149948	Not Available	1009	Open in IMG/M
3300030056\|Ga0302181_10121922	Not Available	1270	Open in IMG/M
3300030057\|Ga0302176_10094390	Not Available	1167	Open in IMG/M
3300030058\|Ga0302179_10464849	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300030399\|Ga0311353_11648184	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300030503\|Ga0311370_12077047	Not Available	564	Open in IMG/M
3300030503\|Ga0311370_12395785	Not Available	511	Open in IMG/M
3300030509\|Ga0302183_10093562	Not Available	1185	Open in IMG/M
3300030524\|Ga0311357_10789777	All Organisms → cellular organisms → Bacteria → Acidobacteria	853	Open in IMG/M
3300030580\|Ga0311355_10424477	Not Available	1294	Open in IMG/M
3300030617\|Ga0311356_10488498	Not Available	1204	Open in IMG/M
3300030618\|Ga0311354_10385813	Not Available	1418	Open in IMG/M
3300030687\|Ga0302309_10123602	Not Available	1374	Open in IMG/M
3300030737\|Ga0302310_10232998	Not Available	1061	Open in IMG/M
3300030814\|Ga0265741_112047	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300030862\|Ga0265753_1094796	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300031027\|Ga0302308_10492955	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300031028\|Ga0302180_10211618	Not Available	1037	Open in IMG/M
3300031090\|Ga0265760_10214902	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M
3300031231\|Ga0170824_106385969	All Organisms → cellular organisms → Bacteria	3527	Open in IMG/M
3300031233\|Ga0302307_10150992	Not Available	1205	Open in IMG/M
3300031233\|Ga0302307_10296624	All Organisms → cellular organisms → Bacteria → Acidobacteria	827	Open in IMG/M
3300031234\|Ga0302325_11443376	Not Available	891	Open in IMG/M
3300031234\|Ga0302325_13015275	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300031236\|Ga0302324_100788816	Not Available	1324	Open in IMG/M
3300031236\|Ga0302324_101343520	Not Available	940	Open in IMG/M
3300031236\|Ga0302324_101441621	Not Available	898	Open in IMG/M
3300031261\|Ga0302140_10478763	Not Available	974	Open in IMG/M
3300031525\|Ga0302326_10899217	Not Available	1259	Open in IMG/M
3300031525\|Ga0302326_11347594	Not Available	968	Open in IMG/M
3300031525\|Ga0302326_11778128	Not Available	808	Open in IMG/M
3300031525\|Ga0302326_11855043	Not Available	786	Open in IMG/M
3300031525\|Ga0302326_12113536	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300031525\|Ga0302326_12516692	Not Available	645	Open in IMG/M
3300031525\|Ga0302326_12919378	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300031708\|Ga0310686_101623375	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300031708\|Ga0310686_109984113	Not Available	546	Open in IMG/M
3300031718\|Ga0307474_10287987	Not Available	1263	Open in IMG/M
3300031753\|Ga0307477_10068669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2447	Open in IMG/M
3300031823\|Ga0307478_11336676	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300031837\|Ga0302315_10221516	Not Available	1125	Open in IMG/M
3300031837\|Ga0302315_10223687	Not Available	1118	Open in IMG/M
3300034124\|Ga0370483_0233515	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300034199\|Ga0370514_037566	Not Available	1209	Open in IMG/M
3300034199\|Ga0370514_039411	Not Available	1180	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.44%
Host-Associated	Host-Associated	1.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.06%
Aquatic	Environmental → Aquatic	9.38%
Plants	Host-Associated → Plants	1.56%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	46.09%
Soil	Environmental → Terrestrial → Soil	42.19%
Freshwater	Environmental → Aquatic → Freshwater	8.59%
Peat Moss	Host-Associated → Plants → Peat Moss	1.56%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	46.09%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	20.31%
Loam	Environmental → Terrestrial → Soil → Loam	16.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.47%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	1.56%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	46.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.47%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.12%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.12%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.34%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.34%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	1.56%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	42.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.59%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.91%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.12%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.34%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.34%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.34%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.34%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.56%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.56%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	1.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.78%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.78%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.78%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.78%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.78%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908035	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300001131	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1	Environmental	Open in IMG/M
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300001461	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3	Environmental	Open in IMG/M
3300001565	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-5cm-18A)- 1 week illumina new	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300024176	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300027029	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF045 (SPAdes)	Environmental	Open in IMG/M
3300027164	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028731	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300028871	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030042	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_1	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030687	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030814	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B3_GZOS_CLC_01900430	2124908035	Soil	RSQTVSPPAPSAADLRIAELERLLGRKQLEVDFLERAFEQVRGAASNRTSDGGKESIARSKARSGSKESV
JGI12648J13191_10314362	3300001084	Forest Soil	ERLLGRKQLEVDFLERAFEQVRGAASNRTSDGGKESIARSKSRSRSKE*
JGI12631J13338_10109702	3300001131	Forest Soil	LERLLGRKQLEVDFLKRAFEQVRGAASSRTSDGGKESIAQSKRGSRSKE*
JGI12649J13570_10223231	3300001175	Forest Soil	GLERRRGRPPGSKSQTISPPAPSPAELRIAELERLLGRKQLEVDFLKRAFEQVRGVTSNRTSDGGKESIAASRSRSRSKD*
JGI12698J15209_10032091	3300001461	Forest Soil	SPPAPSAAESRIAELERLLGRKQLEVDFLKRAFEQVRGAASSRTSDGGKESIARSKSRSRSKE*
A35518A_10192511	3300001565	Permafrost	RPAGQSKAVSQPTPSAAESRIAELERLLGRKQLELDFFKRAFEQVRGAAANRISDGDEGSIAASKPRSRSKEQD*
JGI12635J15846_101686001	3300001593	Forest Soil	MRSVAWGRAARRRLSEARERPPGSKSKSVSQPAVGAAELRIAELERLLGRKQVELDFFKRTFEQVRGAAANRTSDGGKGSIAASKPRSQSKG*
JGI12635J15846_102296922	3300001593	Forest Soil	IAELERLLGRKQLEVDFLKRAFEQVRGAASSRTSDGGKESIAQSKRGSRSKE*
JGI12635J15846_105206341	3300001593	Forest Soil	LLGRKQLEVDFLERAFEQVRGAASNRTSDGGKESIARSKSRSRSKE*
JGI12635J15846_106707002	3300001593	Forest Soil	ARERPPGSKSKSVSQPAVGAAELRIAELERLLGRKQVELDFFKRTFEQVRGAAANRTSDGGKGSIAASKPRSQSKG*
Ga0062385_111270191	3300004080	Bog Forest Soil	SQPIPSAAESRIAELERLLGRKQLELDFFKRAFEQVRGVAANRTSDGGKGSIAASKPHSRSKE*
Ga0062387_1017372122	3300004091	Bog Forest Soil	PGPSAAELRIAELERLLGRKQLEVDFLKRAFEQVRGAAPNRTSDGGKESIAASKSRSRSKE*
Ga0062389_1030159861	3300004092	Bog Forest Soil	GRAALERRRGRPPGSPSKTVCAPTPNAAELRIAELERLLGRKQAELDFFKRTFEQVGGAGANRTSDGGKGSIARSKPRSRSKG*
Ga0070766_105066053	3300005921	Soil	LGRKQLEVDFLERAFEQVRGAASNRISDGGKESIARSKSRSRSRE*
Ga0066787_101442572	3300005950	Soil	SKSKSVSTPPTPSAAELRIAELERLLGRKQVELDFFKRTFEQVRGAAANRTSDGGKGSIAASKPRSHSKE*
Ga0075522_102815712	3300006638	Arctic Peat Soil	GGQAALEREPGRPRASQRLGSPAELRVAELERLLGRKQLELDFFKRTFEQVRGAAASRTSDGGKTSIVASKPHSHSKERD*
Ga0073928_100136561	3300006893	Iron-Sulfur Acid Spring	VDFLERAFEQVRGAASNRISDGGKESIARSKSRSRSKE*
Ga0099829_110143031	3300009038	Vadose Zone Soil	TPSAAELRIAELERLLGRKQVELDFFKRTFEQVRGAAANRTSDGDKGSIAASKPRSQSKE
Ga0116229_104403301	3300009500	Host-Associated	KQLEVDFLKRAFEHVRGVVPSPTSSGDKESIEAFKPRSRSKGKR*
Ga0116105_11547881	3300009624	Peatland	IAELERLLGRKQLELDFFKRAFEQVRGVAANRTSDGGEESIAASKPHSRSKEKD*
Ga0116227_104093111	3300009709	Host-Associated	KSQAPTPPAPSAAESRIAELERLLGRKQLEVDFLKRAFEQVRGAASDRTRDGGKESIAQSKPRSRSKE*
Ga0116101_10762801	3300009759	Peatland	SPPGPSAAELRIAELERLLGRKQLEVDFLKRAFEQVRGAASIPTSDGGKESIAVSKTRSRSKEKC*
Ga0074044_106572051	3300010343	Bog Forest Soil	PAPSAADLRIAQLERLLGRKQLEVDFLERAFEQVRGAASNRISDGGKESIARSKSRSRSKE*
Ga0181531_109873581	3300014169	Bog	SSQIVSPPAPSAADLRIAELERLLGRKQLEVDFLERAFEQVRGAASNRISDGGKESIARSKSRSRSRE*
Ga0182015_106506961	3300014495	Palsa	FLYLWRDQLQTGGRAALERRRGRPPWSPSQTVCPATPNAAALRIAELERLLGRKQLELDFFKRTFEQVRGVGANRTSDGGKGSIARSKPRSRSKG*
Ga0187883_101616711	3300018037	Peatland	KSQTISPPAPSPAELRIAELERLLGRKQLEVDFLKRAFEQVRGVTSNRTSDGGKESIAASRSRSRSKD
Ga0187871_101561111	3300018042	Peatland	QTISPPAPSPAELRIAELERLLGRKQLEVDFLKRAFEQVRGVTSNRTSDGGKESIAASRSRSRSKD
Ga0182025_12622854	3300019786	Permafrost	VRDQFGQKVGRAWSDGEPAPGSKSQIVSPPAPNAAELRIAELERLLGRKQLEVDFLRRAFEQVRGAASNRTSDGGKEFIAASKSRSRSKE
Ga0179596_102865201	3300021086	Vadose Zone Soil	AELRIAELERLLGRKQVELDFFKRTFEQVRGAAANRTSDGDKGSIAASKPRSQSKE
Ga0210400_106740451	3300021170	Soil	RDQFQSGDRVGLERRRGRPPGSRSQTVSPPAPSAADLRVAELERLLGRKQLEVDFLKRAFEQVRGAASNRTGDGGKESIARSKSRSRSKE
Ga0210388_103517861	3300021181	Soil	RPPGSRSQIVSPPAPSAADLRIAELERLLGRKQLEVDFLERAFEQVRGAASNRISDGGKESIARSKSRSRSRE
Ga0210388_103778782	3300021181	Soil	EGKAGLERRRGRPTGSKSQTISPPAPSPAELRIAELERLLGRKQLEVDFLKRAFEQVRGVTSNRTSDGGKESIAASRSRSRSKD
Ga0210388_104552252	3300021181	Soil	WRDQLKAAGIAGLERRKGRPPGSKSQNVSPPGPSAAELRIAELERLLGRKQLEVDFLKRAFEQVRGAASIPTSDGGKESIAVSKTRSRSKEKC
Ga0210388_113377891	3300021181	Soil	IAELERLLGRKQLEVDFLKRAFEQVRGAASNRTSDGGKEFIARSKSRSRSKE
Ga0210389_109166021	3300021404	Soil	LERLLGRKQLEVDFLRRAFEQVRGAASSRTSDGGKESIARSKPRSRSKEQD
Ga0210386_106009201	3300021406	Soil	KFLYQCRHQFEAEGRAGLKRRIGRPQGSKSPTVSPPGFSAAELRIAELERLPGRKHLEVDFLKRTFEELRGTASSRTSDGGKEPIAASKSRSRSKG
Ga0210383_104502632	3300021407	Soil	GSSSQIVSPPAPSAADLRIAELERLLGRKQLEVDFLERAFEQVRGAASNRISDGGKESIARSKSRSRSRE
Ga0210391_108332771	3300021433	Soil	VGLKRRKGRPPGSRSQSASPPVPSAADLRIAELERLLGRKQLEVDFLERAFEQVRGAAWNRTGDGDKESIARSKTRSGSKE
Ga0210398_105187302	3300021477	Soil	ELERLLGRKQLEVDFLERAFEQVRGAASNRTSDGGKESIARSKSRSRSKE
Ga0224549_10147761	3300022840	Soil	RRGRPPGSKSQTVSPPVPSAADLRIAELERLLGRKQLEVDFLKRAFEQVRGAASNRTSDGGKESIAVSKSRSRSKE
Ga0224565_10222852	3300024176	Plant Litter	PGTPSRRSITVEPSAAEQRIAELERLLGRKQLEVDFLKRAFEQVGGAASNRTSDGSKESIARSKRRSRSKESD
Ga0208935_10290292	3300025414	Peatland	AELERLLGRKQLEVDFLKRAFEQVRGVTSNRTSDGGKESIAVSKTRSRSKEKC
Ga0208849_10986262	3300025664	Arctic Peat Soil	RPPGSVSKNISQPTPSAAELRIAELERLLGRKQLELDFFKRTFEQVRGAAANRTSDGGKGSIAASKPRSQSKG
Ga0208731_10231481	3300027029	Forest Soil	RIAELERLLGRKQVELDFFKRTFEHVRGAAANRTSDGGKGSMAASKPRSHSKE
Ga0208994_10333591	3300027164	Forest Soil	APSAAESRIAELERLLGRKQLEVDFLKRAFEQVRGAASNRTSDGGKESIARSKSRSRSKE
Ga0209421_10556112	3300027432	Forest Soil	GKAGLERRRGRPPGSKSQTISPPAPSPAELRIAELERLLGRKQLEVDFLKRAFEQVRGVTSNRTSDGGKESIAASRSRSRSKD
Ga0209525_10307372	3300027575	Forest Soil	PPAPSAGESRIAELERLLGRKQLEVDFLKRAFEQVRGAASSRTSDGGKESIARSKSRSRSKE
Ga0209525_11170171	3300027575	Forest Soil	RKQLEVDFLKRAFEQVRGAASIPTSDGGKESMVASKPRSRSKE
Ga0209221_10242501	3300027609	Forest Soil	IAELERLLGRKQLEVDFLKRAFEQVRGVTSNRTSDGGKESIAASRSRSRSKD
Ga0209420_11894602	3300027648	Forest Soil	VSPPVPSAADLRIAELERLLGRKQLEVDFLKRAFEQVRGAASNRTSDGGKESIARSKSRSRSKE
Ga0209447_100220251	3300027701	Bog Forest Soil	QPSAAELRIAELERLLGRKQVELDFFKRTFEQVRGAAANRTSDGGKGSIAASKPRSQSKG
Ga0209328_100634201	3300027727	Forest Soil	APSAADLRIAELERLLGRKQLEVDFLERAFEQVRGAAWNRTSDGGKESIARSKTRSRSKE
Ga0209448_102601142	3300027783	Bog Forest Soil	VVGAAELRIAELERLLGRKQVELDFFKRTFEQVRGAAANRTSDGGKGSIAASKPRSQSKG
Ga0209169_100771211	3300027879	Soil	LERLLGRKQLEVDFLKRAFEQVRGAASIPTSDGGKESIAVSKTRSRSKEKC
Ga0209380_102935031	3300027889	Soil	IVSPAPSAADLRIAELERLLGRKQLEVDFLGRAFEQVRGAASNRISDGGKESIARSKSRSRSKE
Ga0209380_103357402	3300027889	Soil	SAADLRIAELERLLGRKQLEVDFLERAFEQVRGAAWNRTSDGGKESIARSKTRSRSKE
Ga0209526_101495423	3300028047	Forest Soil	GSQSKAVSQPTPSAAESRIAELERLLGRKQLELDFFKRAFEQVRGAAGNRISDGGKGSIAASKPHSRSKEQG
Ga0302301_11464092	3300028731	Palsa	LERLLGRKQLEVDFFKRAFEQVRGAASSRTSDGGKESIVASKLRSRSKE
Ga0302231_103463021	3300028775	Palsa	LRIAELERLLGRKQLEVDFLKRAFEQVRGAASIPTSDGGKESIAVSKTRSRSKEKC
Ga0302223_102513641	3300028781	Palsa	AAELRIAELERLLGRKQVELDFFKRTFEQVRGAAANRTSDGGKRSIAASKPRSQSKG
Ga0302227_100304575	3300028795	Palsa	ELRIAELERLLGRKQLEVDFFKRAFEQVRGAASSRTSDGGKESIAASKPRSRSKESY
Ga0302222_100927452	3300028798	Palsa	RIAELERLLGRKQLEVDFFKRAFEQVRGAASSRTSDGGKESIVASKLRSRSKESY
Ga0302222_102108302	3300028798	Palsa	ERLLGRKQLEVDFLKRAFEQVRGVTSNRTSDGGKESIAASRSGSRSKD
Ga0302221_101066811	3300028806	Palsa	AEGRAGLERRRGRPPGSKSQTISPPAPSPAELRIAELERLLGRKQLEVDFLKRAFEQVRGVTSNRTSDGGKESIAASRSGSRSKD
Ga0302221_101394021	3300028806	Palsa	LGRKQLEVDFFKRAFEQVRGAASSRTSDGGKESIVASKLRSRSKE
Ga0302221_105049261	3300028806	Palsa	RPPGSKSQNVSPPGPSAAELRIAELERLLGRKQLEVDFFKRAFEQVRGAASSRTSDGGKESIVASKLRSRSKESY
Ga0302228_101171592	3300028808	Palsa	IAELERLLGRKQLEVDFFKRAFEQVRGAASSRTSDGGKESIVASKLRSRSKESY
Ga0302218_101440742	3300028863	Palsa	GKAAFERGPGRPPGSKSKSVSQPVVGAAELRIAELERLLGRKQVELDFFKRTFEQVRGAAANRTSDGGKGSIAASKPRSQSKG
Ga0302230_101592482	3300028871	Palsa	SKSKSVSQPVVSAAELRIAELERLLGRKQVELDFFKRTFEQVRGAAANRTSDGGKGSIASSKPRSQSKG
Ga0222749_108134891	3300029636	Soil	VSSPAPSAADLRIAELERLLGRKQLEVDFLERAFEQVRGAASNRTSDGGKESIARSKSRSRSKE
Ga0311328_104291092	3300029939	Bog	ERLLGRKQLEVDFFKRAFEQVRGAASSRTSDGAKESIVASKLRSRSKE
Ga0311340_104797572	3300029943	Palsa	RIAELERLLGRKQLEVDFFKRAFEQVRGAASSRTSDGGKKSIAASKPRSRSKE
Ga0311340_114225222	3300029943	Palsa	RHQFEAEGRAGLERRRGRPLGSKSQNVSPPGPSAAESRIAELERLLGRKQLEVDFLKRAFEQVRGAASSRTSDGGKESIARSKSRSRSKE
Ga0311352_101007501	3300029944	Palsa	QTISPPAPSPAELRIAELERLLGRKQLEVDFLKRAFEQVRGAAANRTSDGGKESIAASGSRSRSKD
Ga0311371_125365172	3300029951	Palsa	PGAAESRIAELERLLGRKQLEVDFLRRAFEQVRGAGSIRTSDGGKESIARSKSRSRSKE
Ga0311371_125601351	3300029951	Palsa	RLLGQKQAEVDFLERTFEYVRGAAASRTGDGGKESIARSNAHSRSKGQR
Ga0311342_108626611	3300029955	Bog	GLERPKGRPPGSKSQAPTPPAPSAAESRIAELERLLGRKQLEVDFLKRAFEQVRGAASDRTRDGGKESIAQSKPRSRSKE
Ga0311339_113406451	3300029999	Palsa	KSKSVSQPVVGAAELRIAELERLLGRKQVELDFFKRTFEQVRGAAANRTSDGGKGSIAASKPRSQSKG
Ga0311338_104482342	3300030007	Palsa	RKQLEVDFLRRAFEQVRGAGSIRTSDGGKESIARSKSRSRSKE
Ga0311338_113657601	3300030007	Palsa	KSQTASPPVPSAADLRIAELERLLGRKQLEVDFLKRAFEQVRGAASNRTSDGGKESIAVSKSRSRSKE
Ga0311338_115951591	3300030007	Palsa	VGAAELRIAELERLLGRKQVELDFFKRTFEQVRGAAANRTSDGGKGSIAASKPRSHSKG
Ga0302300_11619421	3300030042	Palsa	GRPPGSKSQTVSPPIPDAAELRIAELERLLGRKQLEVDFLKRAFEQVRGAGSNRTSDGGKGSIASSKPRSQSKG
Ga0302182_100658321	3300030054	Palsa	IAELERLLGRKQLEVDFFKRAFEQVRGAASSRTSDGGKESIVASKPRSRSKESY
Ga0302182_101499481	3300030054	Palsa	PGSKSETVSPPMASATELRIAELERLLGRKQLEVDFLKRAFEQVRGVTSNRTSDGGKESIAASRSGSRSKD
Ga0302181_101219222	3300030056	Palsa	AAGIAGLERRKGRPPGSRSPKVSPPGPSAAELRIAELERLLGRKQLEVDFLKRAFEQVRGAASIPTSDGGKESIAVSKTRSRSKEKC
Ga0302176_100943902	3300030057	Palsa	RGRPPGSRSKTVSQPGPSASELRIAELERLLGRKQLELDFFKRTFEQVRGAAATRTSDGGKKSIAASRLRSRLKE
Ga0302179_104648491	3300030058	Palsa	RGRGRPPGSRSKTVSQPGPSASELRIAELERLLGRKQLELDFFKRTFEQVRGAAATRTSDGGKKSIAASRLRSRLKE
Ga0311353_116481842	3300030399	Palsa	LYLWRDQLQAGGRAALERRRGRPPGSQSKVVSQLAPSAAELRIAELERLLGRKQEELEFFKRTFENVRGVAATRISDGEKGSIAASKPHSHSKEQH
Ga0311370_120770472	3300030503	Palsa	RGRPPGSKSQTISPPAPSPSELRIAELERLLGRKQLEVDFLKRAFEQVRGAAANRTSDGGKESIAASGSRSRSKD
Ga0311370_123957851	3300030503	Palsa	GRPPGSASQTVSPPAPSAAESRIAELERLLGRKQLEVDFLRRAFEQVRGAGSIRTSDGGKESIARSKSRSRSKE
Ga0302183_100935621	3300030509	Palsa	IAELERLLGRKQLEVDFFKRAFEQVRGAASSRTSDGGKESIAASKPRSRSKESY
Ga0311357_107897772	3300030524	Palsa	LRIAELERLLGRKQLEVDFFKRAFEQVRGAASSRTSDGGKKSIAASKPRSRSKE
Ga0311355_104244773	3300030580	Palsa	LGRKQLEVDFLKRAFEQVRGAASIPTSDGGKESIAVSKTRSRSKEKC
Ga0311356_104884982	3300030617	Palsa	AELRIAELERLLGRKQLEVDFLKRAFEQVRGVTSNRTSDGGKESIAASRSGSRSKD
Ga0311354_103858133	3300030618	Palsa	KVSPPGPSAAELRIAELERLLGRKQLEVDFLKRAFEQVRGAASIPTSDGGKESIAVSKTRSRSKEKC
Ga0302309_101236023	3300030687	Palsa	ELERLLGRKQLEVDFFKRAFEQVRGAASSRTSDGGKESIVASKLRSRSKE
Ga0302310_102329981	3300030737	Palsa	SQPVVGAAELRIAELERLLGRKQVELDFFKRTFEQVRGAAANRTSDGGKGSIASSKPRSQSKG
Ga0265741_1120471	3300030814	Soil	WRERLQAEGNAGLERRVGRPPGSRPQNISRPVASATELRIAELERLLGRKQLEVDFLKRAFEHVRGAASSHTSAGEKEPTAPSKPRSRSKGKD
Ga0265753_10947961	3300030862	Soil	ISPPAPSAAELRVAELERLLGRKQLEVDFLKRAFEQVRGAASNRTSDGGKESIARSKARSRSKEQG
Ga0302308_104929551	3300031027	Palsa	GSKSQNASPPGPSAAELRIAELERLLGRKQLEVDFLKRAFEQVRGAASIPTSDGGKESIAVSKTRSRSKEKC
Ga0302180_102116181	3300031028	Palsa	QPVVGAAELRIAELERLLGRKQVELDFFKRTFEQVRGAAANRTSDGGKGSIASSKPRSQSKG
Ga0265760_102149021	3300031090	Soil	GGRAGLKRRRGRPPGSSSQIASPPAPSAADLRIAQLERLLGRKQLEVDFLERAFEQVRGAASNRISDGGKESIARSKSRSRSKE
Ga0170824_1063859694	3300031231	Forest Soil	GGKAALERRIGRPPGSQSKAISQPTPSAAESRIAELERLLGRKQLELDFFKRAFEQVRGAAANRTSDGGKGSIAASKPRSRSKEKD
Ga0302307_101509922	3300031233	Palsa	AGLERRKGRPPGSRSQKVSPPGPSAAELRIAELERLLGRKQLEVDFLKRAFEQVRGAASIPTSDGGKESIAVSKTRSRSKEKC
Ga0302307_102966242	3300031233	Palsa	AESRIAELERLLGRKQLEVDFLRRAFEQVRGAGSIRTSDGGKESIARSKSRSRSKE
Ga0302325_114433761	3300031234	Palsa	ELERLLGRKQLEVDFLKRAFEQVRGAASIPTSDGGKESMVASKPRSRSKE
Ga0302325_130152751	3300031234	Palsa	RIAEFERLLGRKQLEVDFLKRAFEQVRGAAPSRTSSGDKGSIGASKPRSRSKE
Ga0302324_1007888161	3300031236	Palsa	QTVSPPIPDAAELRIAELERLLGRKQLEVDFLKRAFEQVRGAGSNRTSDGGKGSIARSKSRSRSKE
Ga0302324_1013435201	3300031236	Palsa	GAAELRIAELERLLGRKQVELDFFKRTFEQVRGAAANRTSDGGKGSIAASKPRSQSKG
Ga0302324_1014416211	3300031236	Palsa	GAAELRIAELERLLGRKQVELDFFKRTFEQVRGAAANRTSDGDKGSIAASKPRSRSKG
Ga0302140_104787631	3300031261	Bog	ERLLGRKQLEVDFFKRAFEQVRGAASSRTSDGGKESIAASKPRSRSKESY
Ga0302326_108992172	3300031525	Palsa	AGITGLERRKGRPPGSKSQNVSPPGPSAAEERIAELERLLGRKQLEVDFLKRAFEQVRGAASIPTNDGGKESIVASKPRSRSKE
Ga0302326_113475941	3300031525	Palsa	GKVALERGPGRPPGSKSKSVSQPVVGAAELRIAELERLLGRKQVELDFFKRTFEQVRGAAANRTSDGGKGSIAASKPRSHSKG
Ga0302326_117781282	3300031525	Palsa	RIAELERLLGRKQLEVDFFKRAFEQVRGAASSRTSDGGKESIVASKLRSRSKE
Ga0302326_118550432	3300031525	Palsa	PNAAELRIAELERLLGRKQLELDFFKRTFEQVRGAGANRTSDGGKGSIARSKPRSRSKG
Ga0302326_121135362	3300031525	Palsa	KSQNVSPPGLSAAELRMAELERLLGRKQLEVDFLKRAFEQVRGAASIPTSDGGKESIAVSKTRSRSKEKC
Ga0302326_125166921	3300031525	Palsa	TPSAAESRIAELERLLGRKQAELDFFKRTFEQVGGAEATRTSDGGKGSIAQSKPRSRSKG
Ga0302326_129193781	3300031525	Palsa	SKSQSVSPPGPSAAELRIAELERLLGRKQLEVDFLKRAFEQVRGAASIPTSDGGKESIVASKPRSRSKE
Ga0310686_1016233751	3300031708	Soil	VEGKAGLERRRGRPPGSKSQTISPPAPSPAELRIAELERLLGRKQLEVDFLKRAFEQVRGVTSNRTSDGGKESIAASRSRSRSKD
Ga0310686_1099841132	3300031708	Soil	VSPPVPGAAELRIAELQRLLGRKQLEVDFLKRAFEQVRGAASNRTSDGGKESIAASKFRS
Ga0307474_102879871	3300031718	Hardwood Forest Soil	SAAESRIAELERLLGRKQLELDFFKRAFEQVRGAAANRTSDGGKGSIAASKPHSRSKEKD
Ga0307477_100686693	3300031753	Hardwood Forest Soil	AGGKAALERRIGRPPGSQSKAISQPTPSAAESRIAELERLLGRKQLELDFFKRAFEQVRGAAANRTSDGGKGSIAASKPHSRSKEKD
Ga0307478_113366761	3300031823	Hardwood Forest Soil	GSQSKAVSQPTPSAAESRIAELERLLGRKQLELDFFKRAFEQVRGAAGNRISDGGKGSIAASKSHSRSKEKD
Ga0302315_102215162	3300031837	Palsa	EVRIAELERLLGRKQLEVDFFKRAFEQVRGAASSRTSDGGKESIVASKLRSRSKE
Ga0302315_102236871	3300031837	Palsa	AELERLLGRKQLEVDFFKRAFEQVRGAASSRTSDGGKESIVASKLRSRSKESY
Ga0370483_0233515_388_627	3300034124	Untreated Peat Soil	RRKGRPPGSKSQNVSPPGPSAAEVRIAELERLLGRKQLEVDFFKRAFEQVRGAASSRTSDGGKESIAASKPRSRSKESY
Ga0370514_037566_990_1208	3300034199	Untreated Peat Soil	PPGSKSQTISPPAPSPAELRIAELERLLGRKQLEVDFLKRAFEQVRGVTSNRTSDGGKESIAASRSRSRSKD
Ga0370514_039411_2_274	3300034199	Untreated Peat Soil	RDQFRAGGRAGLERRRGRPPGSASQTVSPPAPGAAESRIAELERLLGRKQLEVDFLRRAFEQVRGAGSIRTSDGGKESIARSKSRSRSKE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064674

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences