Metagenome / Metatranscriptome Family F064700

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F064700
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	63 residues
Representative Sequence	VKKALAVALIVGFLLVDFLFFHDIFKAGEVVTFPQYLTGVLSIPVLVVSALYLLRGTRTVQK
Number of Associated Samples	108
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.23 %
% of genes near scaffold ends (potentially truncated)	24.22 %
% of genes from short scaffolds (< 2000 bps)	82.03 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (75.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.312 % of family members)
Environment Ontology (ENVO)	Unclassified (33.594 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.969 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.67% β-sheet: 0.00% Coil/Unstructured: 43.33%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF08241	Methyltransf_11	4.69
PF13474	SnoaL_3	3.12
PF01243	Putative_PNPOx	3.12
PF13360	PQQ_2	3.12
PF13649	Methyltransf_25	3.12
PF00211	Guanylate_cyc	2.34
PF02535	Zip	2.34
PF08327	AHSA1	1.56
PF00528	BPD_transp_1	1.56
PF07730	HisKA_3	1.56
PF08240	ADH_N	1.56
PF02567	PhzC-PhzF	0.78
PF04120	Iron_permease	0.78
PF12680	SnoaL_2	0.78
PF00107	ADH_zinc_N	0.78
PF00440	TetR_N	0.78
PF00486	Trans_reg_C	0.78
PF12706	Lactamase_B_2	0.78
PF08194	DIM	0.78
PF00296	Bac_luciferase	0.78
PF13560	HTH_31	0.78
PF13181	TPR_8	0.78
PF11716	MDMPI_N	0.78
PF01872	RibD_C	0.78
PF12840	HTH_20	0.78
PF00753	Lactamase_B	0.78
PF02075	RuvC	0.78
PF07883	Cupin_2	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0428	Zinc transporter ZupT	Inorganic ion transport and metabolism [P]	2.34
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	2.34
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	1.56
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	1.56
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	1.56
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	1.56
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.78
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	0.78
COG0817	Holliday junction resolvasome RuvABC endonuclease subunit RuvC	Replication, recombination and repair [L]	0.78
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.78
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.78 %
Unclassified	root	N/A	24.22 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.00 %
Unclassified	root	N/A	24.22 %
Viruses	superkingdom	All Organisms → Viruses	0.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.00 %
Unclassified	root	N/A	24.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	60.94 %
Unclassified	root	N/A	24.22 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	53.91 %
Unclassified	root	N/A	24.22 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	47.66 %
Unclassified	root	N/A	24.22 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	33.59 %
Unclassified	root	N/A	24.22 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	7.03 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.78 %
Actinobacteria bacterium RBG_16_67_15	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_67_15	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	31.25 %
Unclassified	root	N/A	24.22 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.03 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1.56 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.78 %
Actinobacteria bacterium RBG_16_67_15	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_67_15	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	31.25 %
Unclassified	root	N/A	24.22 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.03 %
Intrasporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium	1.56 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.78 %
Actinobacteria bacterium RBG_16_67_15	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_67_15	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Arthrobacter silvisoli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	31.25 %
Unclassified	root	N/A	24.22 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.03 %
Intrasporangium oryzae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium oryzae	1.56 %
unclassified Nocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia	0.78 %
Actinobacteria bacterium RBG_16_67_15	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_67_15	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Arthrobacter silvisoli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	31.25 %
Unclassified	root	N/A	24.22 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.03 %
Intrasporangium oryzae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium oryzae	1.56 %
Nocardia sp. CS682	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. CS682	0.78 %
Actinobacteria bacterium RBG_16_67_15	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_67_15	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8961257	All Organisms → cellular organisms → Bacteria	4510	Open in IMG/M
2124908043\|A2_c1_ConsensusfromContig8355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	629	Open in IMG/M
3300000890\|JGI11643J12802_10354537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_67_15	1452	Open in IMG/M
3300000956\|JGI10216J12902_105503690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	879	Open in IMG/M
3300000956\|JGI10216J12902_121240516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	984	Open in IMG/M
3300003267\|soilL1_10194939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1813	Open in IMG/M
3300003995\|Ga0055438_10146954	Not Available	695	Open in IMG/M
3300004022\|Ga0055432_10114916	Not Available	720	Open in IMG/M
3300004114\|Ga0062593_100333479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium oryzae	1315	Open in IMG/M
3300004114\|Ga0062593_100598221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1051	Open in IMG/M
3300004114\|Ga0062593_101543407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300004114\|Ga0062593_102103114	Not Available	630	Open in IMG/M
3300004156\|Ga0062589_101494630	All Organisms → cellular organisms → Bacteria → Terrabacteria group	664	Open in IMG/M
3300004643\|Ga0062591_100265479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1322	Open in IMG/M
3300005093\|Ga0062594_101468237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	697	Open in IMG/M
3300005168\|Ga0066809_10000250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6314	Open in IMG/M
3300005328\|Ga0070676_10789599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	700	Open in IMG/M
3300005329\|Ga0070683_100794089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	907	Open in IMG/M
3300005331\|Ga0070670_100112322	All Organisms → cellular organisms → Bacteria	2348	Open in IMG/M
3300005332\|Ga0066388_100017245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6102	Open in IMG/M
3300005338\|Ga0068868_102065279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	542	Open in IMG/M
3300005341\|Ga0070691_10433037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	748	Open in IMG/M
3300005345\|Ga0070692_10991523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	587	Open in IMG/M
3300005354\|Ga0070675_100397143	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1229	Open in IMG/M
3300005354\|Ga0070675_101582912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	604	Open in IMG/M
3300005457\|Ga0070662_100309748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	1285	Open in IMG/M
3300005548\|Ga0070665_102551794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	512	Open in IMG/M
3300005553\|Ga0066695_10284530	Not Available	1044	Open in IMG/M
3300005578\|Ga0068854_100781788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	830	Open in IMG/M
3300005713\|Ga0066905_100529786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	985	Open in IMG/M
3300005937\|Ga0081455_10309248	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300006049\|Ga0075417_10361101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	713	Open in IMG/M
3300006058\|Ga0075432_10027554	Not Available	1957	Open in IMG/M
3300006576\|Ga0074047_12048916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300006852\|Ga0075433_10043544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3897	Open in IMG/M
3300006880\|Ga0075429_101977136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	505	Open in IMG/M
3300009036\|Ga0105244_10515959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	550	Open in IMG/M
3300009094\|Ga0111539_10019025	All Organisms → cellular organisms → Bacteria	8488	Open in IMG/M
3300009098\|Ga0105245_10383395	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1400	Open in IMG/M
3300009098\|Ga0105245_10867963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	943	Open in IMG/M
3300009098\|Ga0105245_11371385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	757	Open in IMG/M
3300009098\|Ga0105245_11806861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	664	Open in IMG/M
3300009147\|Ga0114129_10100404	All Organisms → cellular organisms → Bacteria	4004	Open in IMG/M
3300009147\|Ga0114129_10171362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2959	Open in IMG/M
3300009156\|Ga0111538_13250068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	566	Open in IMG/M
3300010400\|Ga0134122_11808234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	643	Open in IMG/M
3300012353\|Ga0137367_10834780	Not Available	638	Open in IMG/M
3300012358\|Ga0137368_10046382	All Organisms → cellular organisms → Bacteria	3734	Open in IMG/M
3300012360\|Ga0137375_11388910	Not Available	524	Open in IMG/M
3300012469\|Ga0150984_114103216	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300012893\|Ga0157284_10246247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	561	Open in IMG/M
3300012895\|Ga0157309_10196401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	629	Open in IMG/M
3300012907\|Ga0157283_10022913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	1206	Open in IMG/M
3300012951\|Ga0164300_10012898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2693	Open in IMG/M
3300012955\|Ga0164298_10545621	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300012955\|Ga0164298_10555213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	779	Open in IMG/M
3300012955\|Ga0164298_10859158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. CS682	656	Open in IMG/M
3300012960\|Ga0164301_10293246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1091	Open in IMG/M
3300012971\|Ga0126369_10112932	All Organisms → cellular organisms → Bacteria	2486	Open in IMG/M
3300012984\|Ga0164309_10026604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3117	Open in IMG/M
3300012984\|Ga0164309_10126949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	1659	Open in IMG/M
3300012986\|Ga0164304_10068626	All Organisms → cellular organisms → Bacteria	2004	Open in IMG/M
3300013096\|Ga0157307_1136263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	558	Open in IMG/M
3300014166\|Ga0134079_10309336	All Organisms → cellular organisms → Bacteria → Terrabacteria group	705	Open in IMG/M
3300014745\|Ga0157377_10238292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	1173	Open in IMG/M
3300014745\|Ga0157377_10742833	Not Available	717	Open in IMG/M
3300014969\|Ga0157376_10246437	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1667	Open in IMG/M
3300014969\|Ga0157376_13107945	Not Available	503	Open in IMG/M
3300015077\|Ga0173483_10675379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	579	Open in IMG/M
3300015371\|Ga0132258_10508465	Not Available	3014	Open in IMG/M
3300015371\|Ga0132258_11565927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium oryzae	1664	Open in IMG/M
3300015371\|Ga0132258_11845421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1523	Open in IMG/M
3300015373\|Ga0132257_103163214	Not Available	599	Open in IMG/M
3300017944\|Ga0187786_10016981	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1875	Open in IMG/M
3300017966\|Ga0187776_10033834	All Organisms → cellular organisms → Bacteria	2852	Open in IMG/M
3300018028\|Ga0184608_10016931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2588	Open in IMG/M
3300018029\|Ga0187787_10116304	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300018032\|Ga0187788_10027624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1843	Open in IMG/M
3300018032\|Ga0187788_10153334	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300018032\|Ga0187788_10175181	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300018052\|Ga0184638_1043505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1632	Open in IMG/M
3300018054\|Ga0184621_10006502	Not Available	3234	Open in IMG/M
3300018076\|Ga0184609_10007418	Not Available	3951	Open in IMG/M
3300018089\|Ga0187774_10344352	All Organisms → cellular organisms → Bacteria → Proteobacteria	885	Open in IMG/M
3300019356\|Ga0173481_10030330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1729	Open in IMG/M
3300019356\|Ga0173481_10358792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	699	Open in IMG/M
3300022694\|Ga0222623_10013639	Not Available	2985	Open in IMG/M
3300022756\|Ga0222622_10604061	Not Available	792	Open in IMG/M
3300025735\|Ga0207713_1070155	All Organisms → Viruses → Predicted Viral	1296	Open in IMG/M
3300025899\|Ga0207642_10175003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	1164	Open in IMG/M
3300025900\|Ga0207710_10162061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	1090	Open in IMG/M
3300025901\|Ga0207688_10043799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2493	Open in IMG/M
3300025907\|Ga0207645_10872632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	611	Open in IMG/M
3300025926\|Ga0207659_10565408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	967	Open in IMG/M
3300025927\|Ga0207687_10941539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	740	Open in IMG/M
3300025933\|Ga0207706_10371511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	1242	Open in IMG/M
3300025940\|Ga0207691_10410700	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1154	Open in IMG/M
3300025942\|Ga0207689_10177935	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1754	Open in IMG/M
3300025944\|Ga0207661_12099090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	511	Open in IMG/M
3300025945\|Ga0207679_12030621	Not Available	523	Open in IMG/M
3300026067\|Ga0207678_11790093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	538	Open in IMG/M
3300026075\|Ga0207708_10005443	All Organisms → cellular organisms → Bacteria	9390	Open in IMG/M
3300026095\|Ga0207676_11381962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	700	Open in IMG/M
3300026118\|Ga0207675_100229931	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1789	Open in IMG/M
3300026894\|Ga0207980_1004226	Not Available	891	Open in IMG/M
3300026912\|Ga0208520_1004541	Not Available	604	Open in IMG/M
3300027873\|Ga0209814_10546047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	515	Open in IMG/M
3300027907\|Ga0207428_10361532	Not Available	1067	Open in IMG/M
3300028744\|Ga0307318_10254315	Not Available	612	Open in IMG/M
3300028771\|Ga0307320_10047142	Not Available	1588	Open in IMG/M
3300028796\|Ga0307287_10200187	Not Available	758	Open in IMG/M
3300028803\|Ga0307281_10080486	Not Available	1071	Open in IMG/M
3300028814\|Ga0307302_10091361	Not Available	1448	Open in IMG/M
3300028819\|Ga0307296_10246002	Not Available	973	Open in IMG/M
3300028878\|Ga0307278_10135481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1105	Open in IMG/M
3300028878\|Ga0307278_10442154	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300030336\|Ga0247826_10874727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	708	Open in IMG/M
3300031058\|Ga0308189_10060309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter silvisoli	1087	Open in IMG/M
3300031200\|Ga0307496_10138909	Not Available	509	Open in IMG/M
3300031226\|Ga0307497_10692997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300031547\|Ga0310887_10358447	Not Available	848	Open in IMG/M
3300031562\|Ga0310886_10127598	Not Available	1309	Open in IMG/M
3300031720\|Ga0307469_11112523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	743	Open in IMG/M
3300031908\|Ga0310900_11014334	Not Available	683	Open in IMG/M
3300032000\|Ga0310903_10450756	Not Available	664	Open in IMG/M
3300032163\|Ga0315281_10112376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3138	Open in IMG/M
3300032174\|Ga0307470_10476991	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.28%
Host-Associated	Host-Associated	36.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.25%
Plants	Host-Associated → Plants	36.72%
Aquatic	Environmental → Aquatic	7.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.38%
Sediment	Environmental → Aquatic → Sediment	4.69%
Marine	Environmental → Aquatic → Marine	1.56%
Freshwater	Environmental → Aquatic → Freshwater	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.19%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.16%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.25%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.47%
Loam	Environmental → Terrestrial → Soil → Loam	5.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.12%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.56%
Lake	Environmental → Aquatic → Freshwater → Lake	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.16%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.25%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.91%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.12%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.56%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.78%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.47%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.12%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.12%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.12%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.34%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.56%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004022	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025735	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026894	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA (SPAdes)	Environmental	Open in IMG/M
3300026912	Soil and rhizosphere microbial communities from Laval, Canada - mgHPB (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_00498840	2088090015	Soil	VKKALALALIVGFLLVDFLYFHDIFKAGEAVTFAQYLTGVLSIPVLVVSALYLLRGTWTVQK
A2_c1_00378010	2124908043	Soil	MDSENTRLKKMLAIALIAGFLLVDFLFFHDILKPGETITFAQYLTGALSVPVMVLAALYLTWGDKDRPVIRR
JGI11643J12802_103545371	3300000890	Soil	VKKALALALIVGFLLVDFLYFHDIFKAGEAVTFAQYLTGVLSIPVLVVSALYLLRGTW
JGI10216J12902_1055036902	3300000956	Soil	MKVMKVLAVALILGFLVVDFLFFHDVLKPGEVITFPQYLTGVLSIPVVLLSALVLLRGSADL
JGI10216J12902_1212405161	3300000956	Soil	TLIVGFLVVDFLFFHDILKPGEVITFPQYLTGLLSVPVILVAGVYLVRGEDALEQAR*
soilL1_101949394	3300003267	Sugarcane Root And Bulk Soil	VKKGLAVFLIVGFALVDFLFFHDILKPGEAVTFPQLLTGALSVPVLVLSALYLMRGDETRGAH*
Ga0055438_101469541	3300003995	Natural And Restored Wetlands	VKKALAIALIVGFSLVDFLFFHDIFKAGEEVTVAQYLTGVLSIPVLIVSGLYLLRDTGAVQHSSAP*
Ga0055432_101149162	3300004022	Natural And Restored Wetlands	GNVKKALAIALIVGFSLVDFLFFHDIFKAGEEVTVAQYLTGVLSIPVLIVSGLYLLRDTGAVQHSSAP*
Ga0062593_1003334793	3300004114	Soil	MKKALAVTLIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVPVILVAALYLIRGDEELQPTR*
Ga0062593_1005982211	3300004114	Soil	MKKALAVTLIVGFLVVDFLFFHDILKPGEVITFPQYLTGVLSIPVILVAASYLIRGEEALEPAR*
Ga0062593_1015434072	3300004114	Soil	MKKALAIALIVGFLVVDFLFFHDVLKPGEVVTFPQYLTGVLSVPVVVISTLFLLRGDSTLQNP*
Ga0062593_1021031142	3300004114	Soil	VKKALALALIVGFLLVDFLFFHDIFKAGEAVTFAQYLTGVLSIPVLVVSALYLLRGTWTVQK*
Ga0062589_1014946301	3300004156	Soil	DRARKENVVKKGLAVFLIVGFLLVDFLFFHDILKPGEAITFPQFLTGILSVPVLVLSALYLLRGDETRLAH*
Ga0062591_1002654791	3300004643	Soil	VKKALALALIVGFLLVDFLYFHDIFKAGEAVTFAQYLTGVLSIPVLVVSALYLLRGT
Ga0062594_1014682372	3300005093	Soil	VKKALAVALIIGFLLVDFLFFHDLFKAGEAVTFAQYLTGVLSIPVVVVAALYLVRGNSVVQN*
Ga0066809_100002504	3300005168	Soil	VKKALAVALIVGFLLVDFLFFHDIFKAGEAVTFAQYLTGVLSIPVLVVSAFYLLRGTRSVQK*
Ga0070676_107895991	3300005328	Miscanthus Rhizosphere	MKKALALTLIVGFLLVDFLFFHDILKPGEVITFPQYLTGVLSVPVILIAALYVIRGDEELQPAR*
Ga0070683_1007940891	3300005329	Corn Rhizosphere	LIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVPVILVAALYLIRGDEELQPAR*
Ga0070670_1001123225	3300005331	Switchgrass Rhizosphere	VKKALAIAVIVGFLLVDFLFFHDIFKAGEAVTFAQYLTGVLSIPVLVVSALFLLRGTHDAQK*
Ga0066388_1000172457	3300005332	Tropical Forest Soil	MKKAVAIAVIVGFLLVDFLFFHDVLKAGEAVTFPQYLTGALSVPVMIVAAAFLVRGDGGVRNG*
Ga0068868_1020652791	3300005338	Miscanthus Rhizosphere	MKKALAVTLIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVPVILVAALYLIRGDEELQSAR*
Ga0070691_104330371	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	TLIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVPVILVAALYLIRGDEELQPAR*
Ga0070692_109915231	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MKKALALTLIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVPVILVAALYLIRGDEELQPAR*
Ga0070675_1003971432	3300005354	Miscanthus Rhizosphere	MKKALAVTLIVGFLLVDFLFFHDILKPGEVITFPQYLTGLLSVPVILLAGLYLVRGDEELQPAR*
Ga0070675_1015829122	3300005354	Miscanthus Rhizosphere	TLIVGFLLVDFLFFHDILKPGEVITFPQYLTGVLSVPVILIAALYVIRGDEELQPAR*
Ga0070662_1003097483	3300005457	Corn Rhizosphere	MKKALAVTLIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVLVILVAALYLIRGDEELQPAR*
Ga0070665_1025517941	3300005548	Switchgrass Rhizosphere	MKKALALTLIVGFLLVDFLFFHDILKPGEVITFPQYLTGLLSVPVILVAALYLIRGDEELQPAR*
Ga0066695_102845301	3300005553	Soil	VKKALAVTLIVGFLLVDFLFFHDLFKAGEAVTFAQYLTGVLSIPVLVVAALYLLRGTSTVQN*
Ga0068854_1007817882	3300005578	Corn Rhizosphere	MKKALALTLIVGFLLVDFLFFHDILKPGEVITFPQYLTGVLSVPVVLIAALYVIRGDEELQPAR*
Ga0066905_1005297862	3300005713	Tropical Forest Soil	VKKALAIVLIVGFLMVDFLFFHDILKPREVVTFPEFLTGVLSIPVMVVGVLYLLGGIAVSRDAR*
Ga0081455_103092483	3300005937	Tabebuia Heterophylla Rhizosphere	VKKALAVALIVGFLLVDFLFFHDIFKAGEAVTFAQYLAGVLSIPVLVVSALCLFRGTCA*
Ga0075417_103611011	3300006049	Populus Rhizosphere	MKMMKALAVVLIVGFLLVDFLFFHDLLKPGEVITFPQYLTGVLSIPVVLLSALFLLRGSADLRHTG*
Ga0075432_100275542	3300006058	Populus Rhizosphere	VKRVLAIVLLVGFLSVDFLFFHDILKPGEVVTFPQYLTGLLSLPVMVVALVYLLRGTDMFRAQ*
Ga0074047_120489162	3300006576	Soil	ALAVALIVGFLLVDFLFFHDIFKAGGTVTFAQYLTGVLSIPVLVVSALYLLQGTWTVQK*
Ga0075433_100435441	3300006852	Populus Rhizosphere	MKMMKALAVVLIVGFLLVDFLFFHDLLKPGEVITFPQYLTGVLSIPVVLLSALFLLRGSAALRHTG*
Ga0075429_1019771361	3300006880	Populus Rhizosphere	VKRVLAIVLLVGFLSVDFLFFHDILKPGEVVTFPQYLTGLLSLPVMVVALVYLLRGTDMFRAR*
Ga0105244_105159591	3300009036	Miscanthus Rhizosphere	MKKALAVTLIVGFLLVDFLFFHDILKPGEVITFPQYLTGVLSVPVILIAALYVIRGDEELQPAR*
Ga0111539_100190257	3300009094	Populus Rhizosphere	VRRRTLEELGVKRVLAIVLLVGFLSVDFLFFHDILKPGEVVTFPQYLTGLLSLPVMVVALVYLLRGTDMFRAQ*
Ga0105245_103833952	3300009098	Miscanthus Rhizosphere	MKKALAVTLIVGFLLVDFLFFHDILKPGEVITFPQYLTGLLSVPVILLAGLYLIRGDEELQPAR*
Ga0105245_108679631	3300009098	Miscanthus Rhizosphere	MKKALAATLIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVPVILVAALYLIRGDQELQPAR*
Ga0105245_113713852	3300009098	Miscanthus Rhizosphere	MKKALAVTLIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVPVILVAALYLIRGDEELQPAR*
Ga0105245_118068611	3300009098	Miscanthus Rhizosphere	MKKVLAVTLIVGFLLVDFLFFHDALKPGEVITFPQYLTGVLSVPVVLIAAL
Ga0114129_101004045	3300009147	Populus Rhizosphere	VKRVLAIVLLVGFLSVDFLFFHDILTPGEVVTFPQYLTGLLSLPVMVVALVYLLRGTDMFRAR*
Ga0114129_101713621	3300009147	Populus Rhizosphere	MKMVKALAVVLIVGFLLVDFLFFHDLLKPGEVITFPQYLTGVLSIPVVLLSALFLLRGSADLRHTG*
Ga0111538_132500681	3300009156	Populus Rhizosphere	MKKVLAVALIVGFLLVDFLFFHDVLKPGEVITFPQYLTGVLSIPVVLLSALFLLRGSADLRHTG*
Ga0134128_103016182	3300010373	Terrestrial Soil	MNKILAVMLIMGFALVDFLFFHDILKPGERTTPAQYITGLLSLVVFFVSARALVSLRNNHN*
Ga0134122_118082342	3300010400	Terrestrial Soil	MKKVLAVTLIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVPVILVAALYLIRGDEELQPAR*
Ga0137367_108347801	3300012353	Vadose Zone Soil	VKKALAVALIVGFLLVDFLFFHDIFKAGEVVTFPQYLTGVLSIPVLVVSALYLLRGTRTVQK*
Ga0137368_100463824	3300012358	Vadose Zone Soil	VKKALAVALIIGFLLVDFLFFHDIFKAGEAVTFAQYLTGVLSIPVLVVSALYLLRGTLQK
Ga0137375_113889101	3300012360	Vadose Zone Soil	GLIVGFLLVDFLFFHDIFKAGEAVTFAQYLTGVLSIPVLVVSALYLLRGTWTVQK*
Ga0150984_1141032162	3300012469	Avena Fatua Rhizosphere	MKKTIAVVLIVGFLVVDFLFFHDAFKPGEAITFPQYLTGVLSIPVMLIAAGYLIRGDEELLRSR*
Ga0157284_102462471	3300012893	Soil	MKKALAVTLIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVPVILVAALYLIRGEEELQPAR*
Ga0157309_101964012	3300012895	Soil	MKKALAVTLIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVPVILVAALYL
Ga0157283_100229131	3300012907	Soil	MKKALAVTLIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVPVILVAALYLIGGDEELQPAR*
Ga0164300_100128984	3300012951	Soil	MKKALAVVLIFGFVLVDFLFFHDVLKPGEVVTFPQYLTGVLSIPVVVISALFLLRGDGFRSASA*
Ga0164298_105456212	3300012955	Soil	MKKALAIVLIFGFVLVDFLFFHDVLKPGEVVTFPQYLTGVLSIPVVVISALFLLRGDGFRSASA*
Ga0164298_105552132	3300012955	Soil	MKKALAVTLIVGFLVVDFLFFHDILKPGEVITFPQYLTGLLSVPVILVAGLYLVRGDEELQPAR*
Ga0164298_108591582	3300012955	Soil	MKKALAIVLIFGFVLVDFLFYHDLFKPGEIVTFPQYLTGVLSIPVVVISAVFLLRGDSFRSASA*
Ga0164301_102932462	3300012960	Soil	MKKALAIVLIFGFVLVDFLFFHDLFKPGEIVTFPQYLTGVLSIPVVVISALFLLRGDGFRSASA*
Ga0126369_101129322	3300012971	Tropical Forest Soil	MKRALAAALILGFLLVDFLFFHDILKPGEGITFPQYLTGLLSVPVILISGFFLLRGGGNIGTPDV*
Ga0164309_100266044	3300012984	Soil	MKKALAIVLIFGFVLVDFLFFHDVLKPGEVVTFPQYLTGVLSIPVVVISAVFLLRGDSFRSASA*
Ga0164309_101269491	3300012984	Soil	MKKALAVTLIVGFLVVDFLFFHDILKPGEVITFPQYLTGLLSVPVILVAALYLIRGDEELQSAR*
Ga0164304_100686262	3300012986	Soil	MKKALAIVLIFGFVLVDFLFFHDLFKPGEIVTFPQYLTGVLSIPVVVISAVFLLRGDSFRSASA*
Ga0157307_11362632	3300013096	Soil	MKKALAVTLIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVPVILVAALYLIRGDEVLQPAR*
Ga0134079_103093362	3300014166	Grasslands Soil	MKEALAIVLIFGFLLVDFLFFHDVLKPGEVITFPQYLTGVLSILILIVSALCLLRDNGIVRNGS*
Ga0157377_102382922	3300014745	Miscanthus Rhizosphere	MKKALAVTLIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVPVILLAGLYLIRGDEELQPAR*
Ga0157377_107428332	3300014745	Miscanthus Rhizosphere	VKKALAIAVIVGFLLVDFLFFHDIFKAGEAVTFAQYLTGVLSIPVLVVCALYLLRGTWTVQK*
Ga0157376_102464374	3300014969	Miscanthus Rhizosphere	MKKALALTLIVGFLLVDFLFFHDILKPGEVITFPQYLTGVLSVPVILIAALYVIRGGEELQPAR*
Ga0157376_131079452	3300014969	Miscanthus Rhizosphere	AVALIIGFLLVDFLFFHDILKAGEAVTFAQYLTGVLSIPVLVVSALFLLRGTHDVQN*
Ga0173483_106753791	3300015077	Soil	MKKALAVTLIVGFLVVDFLFFHDILKPGEVITFPQYLTGILSIPVILVAASYLIRGE
Ga0132258_105084652	3300015371	Arabidopsis Rhizosphere	MPKSPQERGNVKNALAVALIVGFLLVDFLFFHDIFKAGEAVTFAQYLTGVLSIPVLVVSALFLRGDVQK*
Ga0132258_115659273	3300015371	Arabidopsis Rhizosphere	MKKALAVTLIVGFLLVDFLFFHDILKPGEVITFPQYLTGLLSVPVILVAGLYLVRGDEELQPAR*
Ga0132258_118454211	3300015371	Arabidopsis Rhizosphere	MKKALAVTLIVGFLLVDFLFFHDILKPGEVITFPQYLTGLLSVPVILVAALYLIRGD*
Ga0132257_1031632141	3300015373	Arabidopsis Rhizosphere	MPKSPQERGNVKNALAVALIVGFLLVDFLFFHDILKAGEAVTFAQYLTGVLSIPVLVVSALFLRGDVQK*
Ga0187786_100169813	3300017944	Tropical Peatland	VKKALAIALIVGFMLVDFLFFHDILKPGESITFPQYLTGVLSVPVLIVCVVYLARGDRGTPIVR
Ga0187776_100338342	3300017966	Tropical Peatland	MKKALAIALILGFLVVDFLFFHDILKAGERVTFPQYLTGVLSIPVIVVSGMYLLRDN
Ga0184608_100169314	3300018028	Groundwater Sediment	VKKALAVALIVGFLLVDFLFFHDIFKGGEAVTFAQYLAGVLSIPVLVVSALYLLRGTRTVQK
Ga0187787_101163042	3300018029	Tropical Peatland	VKKALAIALIVGFLLVDFLFFHDILKPGESITFPQYLTGVLSVPVLIVCVVYLARGDRGTPIVR
Ga0187788_100276242	3300018032	Tropical Peatland	VKKALAIALIVGFLLVDFLFFHDILKPGESITFPQFLSVVFSVPVLIVCVVYLARGDRGTPIVR
Ga0187788_101533342	3300018032	Tropical Peatland	MKKALAIALILGFLVVDFLFFHDIFKAGERVTFPQYLTGLLSVPVIVICGIFLLRGDGDFRPGSTGR
Ga0187788_101751812	3300018032	Tropical Peatland	MKKALAVAVILGFLLVDFLFFHDVLKPGEDVTFPQYLTGVLSIPVLIIAALDLLRGNGNLRNTG
Ga0184638_10435053	3300018052	Groundwater Sediment	VKKALAVALIVGFLLVDFLFFHDIFKSGETVTFAQYLTGVLSIPVLVVSALYLLRGTCTVQK
Ga0184621_100065027	3300018054	Groundwater Sediment	VKKALAVALIVGFLLVDFLFFHDIFKAGEAVTFPQYLTGVVSIPLLVISALYLLRGTRTVQK
Ga0184609_100074185	3300018076	Groundwater Sediment	MKKALAVALIVGFLLVDFLFFHDIVKAGEAVTFPQYLTGVLSIPVLVISALYLLRGPRTVQK
Ga0187774_103443522	3300018089	Tropical Peatland	MKKALAIALILGFLVVDFLFFHDIFKAGERVTFPQYLTGVLSIPVIVVSGMYLLRDN
Ga0173481_100303302	3300019356	Soil	MKKALAVTLIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVPVILVAALYLIRGDEELQPAR
Ga0173481_103587921	3300019356	Soil	MKKALAIALIVGFLVVDFLFFHDVLKPGEVVTFPQHLTGVLSVPVVVISTLFLLRGDSTLQNP
Ga0222623_100136393	3300022694	Groundwater Sediment	MKKALAVALIVGFLLVDFLFFHDIVKAGEAVTFPQYLTGVLSIPVLVISALYLLRGTRTVQK
Ga0222622_106040612	3300022756	Groundwater Sediment	GMKKALAVALIVGFLLVDFLFFHDIVKAGEAVTFPQYLTGVVSIPLLVISALYLLRGTRTVQK
Ga0207713_10701551	3300025735	Switchgrass Rhizosphere	VKKALAIAVIVGFLLVDFLFFHDIFKAGEAVTFAQYLTGVLSIPVLVVSALFLLRGTHDAQK
Ga0207642_101750032	3300025899	Miscanthus Rhizosphere	MKKALALTLIVGFLLVDFLFFHDILKPGEVITFPQYLTGVLSVPVILIAALYVIRGDEELQPAR
Ga0207710_101620612	3300025900	Switchgrass Rhizosphere	MKKALALTLIVGFLLVDFLFFHDILKPGEVITFPQYLTGVLSVPVVLIAALYVIRGDEELQPAR
Ga0207688_100437993	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MKKALAVTLIVGFLLVDFLFFHDILKPGEVITFPQYLTGVLSVPVILIAALYVIRGDEELQPAR
Ga0207645_108726321	3300025907	Miscanthus Rhizosphere	MKKVLAVTLIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVPVILVAALYLIRGDESYSPLASSAAGP
Ga0207659_105654082	3300025926	Miscanthus Rhizosphere	MKKALAVTLIVGFLLVDFLFFHDILKPGEVITFPQYLTGLLSVPVILLAGLYLVRGDEELQPAR
Ga0207687_109415392	3300025927	Miscanthus Rhizosphere	TLIVGFLLVDFLFFHDILKPGEVITFPQYLTGLLSVPVILLAGLYLIRGDEELQPAR
Ga0207706_103715113	3300025933	Corn Rhizosphere	MKKALAVTLIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVLVILVAALYLIRGDEELQPAR
Ga0207691_104107003	3300025940	Miscanthus Rhizosphere	MKKALALTLIVGFLLVDFLFFHDILKPGEVITFPQYLTGVLSVPVILIAALY
Ga0207689_101779354	3300025942	Miscanthus Rhizosphere	MKKALAVTLIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVPVILVAALYLIRGDQELQPAR
Ga0207661_120990901	3300025944	Corn Rhizosphere	TLIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVPVILVAALYLIRGDEELQPAR
Ga0207679_120306211	3300025945	Corn Rhizosphere	VKKALAIAVIVGFLLVDFLFFHDIFKAGEAVTFAQYLTGVLSIPVLVVSALFLLRGTHDGQK
Ga0207678_117900931	3300026067	Corn Rhizosphere	MKKALALTLIVGFLLVDFLFFHDILKPGEVITFPQYLTGVLSVPVVLIAALYVIRGDEEL
Ga0207708_100054434	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MKKALAVTLIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVPVILVAALSLIRGDEELQPAR
Ga0207676_113819621	3300026095	Switchgrass Rhizosphere	MKKALALTLIVGFLLVDFLFFHDILKPGEVITFPQYLTGLLSVPVILLAGLYLVRGDEELQPAR
Ga0207675_1002299313	3300026118	Switchgrass Rhizosphere	MKKALALTLIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVPVILVAALYLIRGDEELRPAR
Ga0207980_10042262	3300026894	Soil	PQERSNVKKALAVALLVGFLLVDFLFFHDIFKAGEAVTFAQYLTGVLSIPVLVVSAFYLLRGTRSVQK
Ga0208520_10045412	3300026912	Soil	NVKKALAVALIVGFLLVDFLFFHDIFKAGEAVTFAQYLTGVLSIPVLVVSAFYLLRGTRSVQK
Ga0209814_105460472	3300027873	Populus Rhizosphere	MKMMKALAVVLIVGFLLVDFLFFHDLLKPGEVITFPQYLTGVLSIPVVLLSALFLLRGSADLRHTG
Ga0207428_103615321	3300027907	Populus Rhizosphere	VKRVLAIVLLVGFLSVDFLFFHDILKPGEVVTFPQYLTGLLSLPVMVVALVYLLRGTDMFRAQ
Ga0307318_102543153	3300028744	Soil	AVALIVGFLLVDFLFFHDIFKAGEALTFAQYLTGVLSIPVLVVSALYLLRGTRTVQK
Ga0307320_100471423	3300028771	Soil	RWEYASRSMSNDDTPGPQERGNVKKALAVALIVGFLLVDFLFFHDIFKAGEALTFAQYLTGVLSIPVLVVSALYLLRGTRTVQK
Ga0307287_102001871	3300028796	Soil	KKALAVALIVGFLLVDFLFFHDIFKAGEALTFAQYLTGVLSIPVLVVSALYLLRGTRTVQ
Ga0307281_100804862	3300028803	Soil	VKKALAVALIVGFLLVDFLFFHDIFKAGEAVTFAQFLTGALSIPVLVVSALYLLRGTSTVQK
Ga0307302_100913611	3300028814	Soil	MSNDDTPGPQERGNVKKALAVALIVGFLLVDFLFFHDIFKAGETVTFAQYLTGVLSIPVLVVSAL
Ga0307296_102460021	3300028819	Soil	VKKALAVALIVGFLLVDFLFFHDIFKAGEAVTFAQYLTGVLSIPVLVVSALYLLRGTRTVQK
Ga0307278_101354812	3300028878	Soil	LAIVLIFGFVLVDFLFFHDVLKPGEIVTFPQYLTGVLSIPVVVISALFLLRGDSFRSASA
Ga0307278_104421541	3300028878	Soil	MKKALAIVLTFGFVLVDFLFFHDVLKPGEIVTFPQYLTGVLSIPVVVISAL
Ga0247826_108747272	3300030336	Soil	MKKALAVTLIVGFLLVDFLFFHDVLKPGEVITFPQYLTGLLSVPVILVAALYLIRGDEELQSAR
Ga0308189_100603091	3300031058	Soil	AVVLIVGFLLVDFLFFHDVLKAGETITFPQYLTGLLSVPVIVLSFLFLVRGGESTHVLR
Ga0307496_101389091	3300031200	Soil	RGNVKKALAVALIVGFLLVDFLFFHDIFKAGEAVTFAQYLTGVLSIPVLVVSALFLLRGTHDVQK
Ga0307497_106929972	3300031226	Soil	MLSIGVNALAVALIVGFLLVDFLFFHDLFKAGEAVSFAQYLTGVLSIPVVVVAVLYLFRGTSTVQN
Ga0310887_103584471	3300031547	Soil	MPKSPQERGNVKNALAVALIVGFLLVDFLFFHDIFKAGEAVTFAQYLTGVLSIPVLVVSALFLLRGTHDAQK
Ga0310886_101275981	3300031562	Soil	MPKSPQERGNVKNALAVALIVGFLLVDFLFFHDIFKAGEAVTFAQYLTGVLSIPVLVVSALFLRGDVQK
Ga0307469_111125232	3300031720	Hardwood Forest Soil	MPRPQNSGNVMKALAVALIVGFLLVDFLFFHDIFKAGEAVTFAQYLTGVLSIPVLVVSALYLLRGTRTVQK
Ga0310900_110143341	3300031908	Soil	MPKSPQERGNVKNALAVALIVGFLLVDFLFFHDILKAGEAVTFAQYLTGVLSIPVLVVSALFLLRGTHDAQK
Ga0310903_104507561	3300032000	Soil	MPKSPQERGNVKNALAVALIVGFLLVDFLFFHDILKAGEAVTFAQYLTGVLSIPVLVVSALFLRGDVQK
Ga0315281_101123762	3300032163	Sediment	VKKALAVALLVGFLLVDFLFFHDLFKAGEAVTFAQYLTGVLSIPVLVVAALYLLRCTSTVQN
Ga0307470_104769912	3300032174	Hardwood Forest Soil	VKKALAVTLVVGFLLVDFLFFHDILKAGEDVTFPQYLTGLLSVPVMIVAALSLARGDEATHRPSP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064700

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences