Metagenome / Metatranscriptome Family F064704

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064704
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	62 residues
Representative Sequence	MPLRPSYKICPGDRLEVEVVQPDGGRALVVGKLDAVPEAAGGKALRIRVCEAQVQALPAAS
Number of Associated Samples	76
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	64.84 %
% of genes near scaffold ends (potentially truncated)	23.44 %
% of genes from short scaffolds (< 2000 bps)	94.53 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.312 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.875 % of family members)
Environment Ontology (ENVO)	Unclassified (32.031 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (71.094 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 32.58% Coil/Unstructured: 67.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF11774	Lsr2	1.56
PF13683	rve_3	1.56
PF07883	Cupin_2	1.56
PF01548	DEDD_Tnp_IS110	0.78
PF00459	Inositol_P	0.78
PF14690	zf-ISL3	0.78
PF00293	NUDIX	0.78
PF00353	HemolysinCabind	0.78
PF05977	MFS_3	0.78
PF01609	DDE_Tnp_1	0.78
PF00665	rve	0.78
PF13333	rve_2	0.78
PF00872	Transposase_mut	0.78
PF00589	Phage_integrase	0.78
PF00067	p450	0.78
PF13005	zf-IS66	0.78
PF13613	HTH_Tnp_4	0.78
PF13673	Acetyltransf_10	0.78
PF00781	DAGK_cat	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	1.56
COG2124	Cytochrome P450	Defense mechanisms [V]	0.78
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.78
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.78
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.78
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.78
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.78
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.78
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.78
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.78
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.78
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.78
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.78
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.78
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.31 %
All Organisms	root	All Organisms	29.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.31 %
cellular organisms	root	All Organisms → cellular organisms	29.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.31 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.31 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	23.44 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.31 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	19.53 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.78 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.31 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	18.75 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.78 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.31 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	3.12 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.78 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.78 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.78 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.31 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3.12 %
Actinobacteria bacterium OV450	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium OV450	0.78 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.78 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.78 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.78 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.78 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.31 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	3.12 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	0.78 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.78 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.78 %
Actinobacteria bacterium OV450	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium OV450	0.78 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.78 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.31 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	1.56 %
unclassified Microbacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium	0.78 %
Pseudonocardia thermophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	0.78 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.78 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.78 %
Actinobacteria bacterium OV450	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium OV450	0.78 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.78 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.31 %
Pseudonocardia sp. KRD291	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. KRD291	1.56 %
Microbacterium sp. No. 7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp. No. 7	0.78 %
Pseudonocardia thermophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	0.78 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.78 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.78 %
Actinobacteria bacterium OV450	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium OV450	0.78 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.78 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y01BKXVK	Not Available	576	Open in IMG/M
3300002568\|C688J35102_119122653	Not Available	641	Open in IMG/M
3300002568\|C688J35102_119616915	Not Available	732	Open in IMG/M
3300002568\|C688J35102_120124043	Not Available	889	Open in IMG/M
3300004016\|Ga0058689_10037046	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300004463\|Ga0063356_103898621	Not Available	642	Open in IMG/M
3300004463\|Ga0063356_104655509	Not Available	590	Open in IMG/M
3300004463\|Ga0063356_104757783	Not Available	583	Open in IMG/M
3300004479\|Ga0062595_101641762	Not Available	601	Open in IMG/M
3300005337\|Ga0070682_101158740	Not Available	650	Open in IMG/M
3300005337\|Ga0070682_102034010	Not Available	506	Open in IMG/M
3300005337\|Ga0070682_102067682	Not Available	502	Open in IMG/M
3300005338\|Ga0068868_102254503	Not Available	519	Open in IMG/M
3300005343\|Ga0070687_100343255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	961	Open in IMG/M
3300005365\|Ga0070688_101127531	Not Available	628	Open in IMG/M
3300005466\|Ga0070685_11501756	Not Available	519	Open in IMG/M
3300005539\|Ga0068853_100565442	Not Available	1078	Open in IMG/M
3300005562\|Ga0058697_10184579	Not Available	935	Open in IMG/M
3300005577\|Ga0068857_101748648	Not Available	608	Open in IMG/M
3300005614\|Ga0068856_101449434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	701	Open in IMG/M
3300005614\|Ga0068856_102684337	Not Available	503	Open in IMG/M
3300005719\|Ga0068861_101064964	All Organisms → cellular organisms → Bacteria → Terrabacteria group	775	Open in IMG/M
3300005841\|Ga0068863_101568519	Not Available	667	Open in IMG/M
3300005842\|Ga0068858_102246255	Not Available	539	Open in IMG/M
3300006572\|Ga0074051_11637024	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300006577\|Ga0074050_11629651	Not Available	924	Open in IMG/M
3300006605\|Ga0074057_12283765	Not Available	605	Open in IMG/M
3300006755\|Ga0079222_10077826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1660	Open in IMG/M
3300006845\|Ga0075421_101358088	Not Available	784	Open in IMG/M
3300006880\|Ga0075429_100818129	Not Available	816	Open in IMG/M
3300009094\|Ga0111539_10091028	All Organisms → cellular organisms → Bacteria	3584	Open in IMG/M
3300009094\|Ga0111539_10234653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2136	Open in IMG/M
3300009094\|Ga0111539_11659807	Not Available	741	Open in IMG/M
3300009098\|Ga0105245_10311428	Not Available	1548	Open in IMG/M
3300009098\|Ga0105245_10546953	Not Available	1179	Open in IMG/M
3300009098\|Ga0105245_12422729	Not Available	578	Open in IMG/M
3300009156\|Ga0111538_11898913	Not Available	749	Open in IMG/M
3300009553\|Ga0105249_12101106	Not Available	638	Open in IMG/M
3300010040\|Ga0126308_10466342	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	850	Open in IMG/M
3300010042\|Ga0126314_10423355	Not Available	961	Open in IMG/M
3300010045\|Ga0126311_11055537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	666	Open in IMG/M
3300010166\|Ga0126306_11475712	Not Available	564	Open in IMG/M
3300010375\|Ga0105239_10867453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1035	Open in IMG/M
3300010396\|Ga0134126_12056922	Not Available	624	Open in IMG/M
3300012212\|Ga0150985_101138990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. KRD291	523	Open in IMG/M
3300012212\|Ga0150985_103643708	Not Available	502	Open in IMG/M
3300012212\|Ga0150985_104926999	Not Available	925	Open in IMG/M
3300012212\|Ga0150985_105629003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	582	Open in IMG/M
3300012212\|Ga0150985_107617729	Not Available	511	Open in IMG/M
3300012212\|Ga0150985_107999507	Not Available	1308	Open in IMG/M
3300012212\|Ga0150985_108921041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1374	Open in IMG/M
3300012212\|Ga0150985_110880738	Not Available	549	Open in IMG/M
3300012212\|Ga0150985_111867823	Not Available	528	Open in IMG/M
3300012212\|Ga0150985_117897823	Not Available	686	Open in IMG/M
3300012212\|Ga0150985_118045658	Not Available	1148	Open in IMG/M
3300012212\|Ga0150985_119706859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	716	Open in IMG/M
3300012212\|Ga0150985_120746262	Not Available	815	Open in IMG/M
3300012469\|Ga0150984_100194433	Not Available	1089	Open in IMG/M
3300012469\|Ga0150984_101599104	Not Available	879	Open in IMG/M
3300012469\|Ga0150984_115688285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp. No. 7	575	Open in IMG/M
3300012469\|Ga0150984_118530124	Not Available	704	Open in IMG/M
3300012469\|Ga0150984_120427310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. KRD291	552	Open in IMG/M
3300012469\|Ga0150984_122005382	Not Available	746	Open in IMG/M
3300012502\|Ga0157347_1058400	Not Available	547	Open in IMG/M
3300012908\|Ga0157286_10367145	Not Available	548	Open in IMG/M
3300012911\|Ga0157301_10269453	Not Available	608	Open in IMG/M
3300012937\|Ga0162653_100050953	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300012961\|Ga0164302_11626501	Not Available	538	Open in IMG/M
3300013102\|Ga0157371_10594552	Not Available	823	Open in IMG/M
3300013307\|Ga0157372_10434965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium OV450	1529	Open in IMG/M
3300014745\|Ga0157377_11624535	Not Available	519	Open in IMG/M
3300015371\|Ga0132258_12458663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1304	Open in IMG/M
3300015372\|Ga0132256_100218282	Not Available	1962	Open in IMG/M
3300015372\|Ga0132256_102362643	Not Available	634	Open in IMG/M
3300015374\|Ga0132255_105045077	Not Available	559	Open in IMG/M
3300015374\|Ga0132255_105415066	Not Available	540	Open in IMG/M
3300018067\|Ga0184611_1293291	Not Available	567	Open in IMG/M
3300018083\|Ga0184628_10710154	Not Available	500	Open in IMG/M
3300018422\|Ga0190265_11729611	Not Available	735	Open in IMG/M
3300018432\|Ga0190275_11236980	Not Available	822	Open in IMG/M
3300018466\|Ga0190268_11321509	Not Available	610	Open in IMG/M
3300018466\|Ga0190268_11718275	Not Available	560	Open in IMG/M
3300018469\|Ga0190270_12626626	Not Available	566	Open in IMG/M
3300018476\|Ga0190274_10417407	Not Available	1308	Open in IMG/M
3300018481\|Ga0190271_10535947	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1285	Open in IMG/M
3300018481\|Ga0190271_10886375	Not Available	1017	Open in IMG/M
3300018481\|Ga0190271_11103916	Not Available	917	Open in IMG/M
3300018481\|Ga0190271_11156876	Not Available	897	Open in IMG/M
3300018481\|Ga0190271_11300643	Not Available	847	Open in IMG/M
3300018481\|Ga0190271_12195812	Not Available	658	Open in IMG/M
3300018481\|Ga0190271_13479834	Not Available	527	Open in IMG/M
3300018920\|Ga0190273_10023554	All Organisms → cellular organisms → Bacteria	2801	Open in IMG/M
3300018920\|Ga0190273_10034410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2426	Open in IMG/M
3300018920\|Ga0190273_10062244	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1939	Open in IMG/M
3300018920\|Ga0190273_10171111	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1324	Open in IMG/M
3300018920\|Ga0190273_10174690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1314	Open in IMG/M
3300018920\|Ga0190273_10288769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1089	Open in IMG/M
3300018920\|Ga0190273_10327706	Not Available	1039	Open in IMG/M
3300018920\|Ga0190273_10373855	Not Available	990	Open in IMG/M
3300018920\|Ga0190273_10736084	Not Available	771	Open in IMG/M
3300018920\|Ga0190273_11864890	Not Available	550	Open in IMG/M
3300020069\|Ga0197907_10892628	Not Available	584	Open in IMG/M
3300025901\|Ga0207688_10050172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	2335	Open in IMG/M
3300025901\|Ga0207688_10099743	Not Available	1676	Open in IMG/M
3300025901\|Ga0207688_10835406	Not Available	584	Open in IMG/M
3300025901\|Ga0207688_11098525	Not Available	502	Open in IMG/M
3300025909\|Ga0207705_10817718	Not Available	723	Open in IMG/M
3300025926\|Ga0207659_10857288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	781	Open in IMG/M
3300025942\|Ga0207689_11450169	Not Available	574	Open in IMG/M
3300026089\|Ga0207648_11322307	Not Available	677	Open in IMG/M
3300026095\|Ga0207676_12310512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300026121\|Ga0207683_10846214	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	849	Open in IMG/M
3300027809\|Ga0209574_10043141	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300028379\|Ga0268266_12164221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	528	Open in IMG/M
3300028596\|Ga0247821_10059878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2089	Open in IMG/M
3300028596\|Ga0247821_10603831	All Organisms → cellular organisms → Bacteria → Terrabacteria group	708	Open in IMG/M
3300028754\|Ga0307297_10117831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	886	Open in IMG/M
3300028875\|Ga0307289_10406531	Not Available	560	Open in IMG/M
3300030336\|Ga0247826_11057706	Not Available	646	Open in IMG/M
3300030336\|Ga0247826_11134073	Not Available	625	Open in IMG/M
3300030510\|Ga0268243_1030884	Not Available	1102	Open in IMG/M
3300031938\|Ga0308175_100154815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2202	Open in IMG/M
3300031938\|Ga0308175_101998343	Not Available	650	Open in IMG/M
3300032004\|Ga0307414_11600232	Not Available	607	Open in IMG/M
3300034007\|Ga0334936_118407	Not Available	554	Open in IMG/M
3300034025\|Ga0334940_041958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1252	Open in IMG/M
3300034029\|Ga0334951_179770	Not Available	519	Open in IMG/M
3300034176\|Ga0364931_0082586	Not Available	1003	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	50.78%
Environmental	Environmental	48.44%
Engineered	Engineered	0.78%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.78%
Terrestrial	Environmental → Terrestrial	46.88%
Aquatic	Environmental → Aquatic	1.56%
Solid Waste	Engineered → Solid Waste	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	27.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.31%
Sediment	Environmental → Aquatic → Sediment	1.56%
Phylloplane	Host-Associated → Plants → Phylloplane	1.56%
Floodplain	Environmental → Terrestrial → Floodplain	0.78%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.78%
Roots	Host-Associated → Plants → Roots	0.78%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.78%
Grass	Engineered → Solid Waste → Grass	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.59%
Loam	Environmental → Terrestrial → Soil → Loam	7.03%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	2.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.56%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.78%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.78%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.78%
Composting	Engineered → Solid Waste → Grass → Composting	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.59%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.69%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.34%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	2.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.56%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.56%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.78%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.88%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	10.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.69%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	4.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.12%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.12%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.12%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.12%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	3.12%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.34%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.34%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.34%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	2.34%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.34%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.34%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.56%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.78%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.78%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.78%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012502	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610	Host-Associated	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300034007	Biocrust microbial communities from Mojave Desert, California, United States - 32SMC	Environmental	Open in IMG/M
3300034025	Biocrust microbial communities from Mojave Desert, California, United States - 36SMC	Environmental	Open in IMG/M
3300034029	Biocrust microbial communities from Mojave Desert, California, United States - 47SNC	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_00873340	2170459017	Switchgrass, Maize And Mischanthus Litter	MSTFRPYSITPGQLLEVEVVQPDGARALVAGRLDAVPETVRGGHALKIRVCDARVRALPCES
C688J35102_1191226532	3300002568	Soil	MPSRRPSYAICPGDRIEVEVVQPDGGRALVVGKLDKVPEAAGGRALRVVVCDAQVSTLPSR*
C688J35102_1196169152	3300002568	Soil	MPFRPYSLRPGQRLEVEVVQPDGGRALVAGVLEAVPETTHGQALRIRVCDARITALPAAG
C688J35102_1201240431	3300002568	Soil	MPFRPEYRICPGDHLEVEVVQPDGGRALVVGKLDAVPKVAGGCAMRIVVCEAQIKVLPAR
Ga0058689_100370461	3300004016	Agave	MPLRPTYGICPSNRIEVEIVQPDGGRALVVGKLDAVPESAGGRALRVRVCDARVTPLPAE
Ga0063356_1038986211	3300004463	Arabidopsis Thaliana Rhizosphere	MPFRPAYKICPGDRIEVEVVQPDGGRALVVGKLDAVPEAAGGRVLRIRVCDAHVQALPATP*
Ga0063356_1046555091	3300004463	Arabidopsis Thaliana Rhizosphere	QAAHADRMPFRPTYAVSLVDRIAAEIVQPDGGRALVIGKLDAVPEAAGTLALRIRVCDAHVPALPAVG*
Ga0063356_1047577831	3300004463	Arabidopsis Thaliana Rhizosphere	MPTVPNYRIRPGDRLEVEVVQPDGGRALVIGKLDAVPEGAGGLALRIQVCHAHVQGLTAEPRP
Ga0062595_1016417621	3300004479	Soil	PRPRKVGRMAPFRPYSFLPGQRLEVEVVQPDGGRALVAGVLDAVPETTHGQALRIRVCEAQVRVLPAAS*
Ga0070682_1011587402	3300005337	Corn Rhizosphere	MPSRRPSYAICPGDRIEVEVVQPDGGRALVAGKLDAVPEGAGGKALRIRVCGAQVRTLSAAQVT*
Ga0070682_1020340101	3300005337	Corn Rhizosphere	MPTRPIYRIRPGDRLEVEVVQSDGGRAIVVGKLDAVPEGAGGLALRIRVCDAQVRALPAGGG*
Ga0070682_1020676821	3300005337	Corn Rhizosphere	MPSFRPYSLMPGQRLEVEVVQPDGGRALVVGVLDSVPDTTHGRALKIKVRDARVRALPAE
Ga0068868_1022545032	3300005338	Miscanthus Rhizosphere	HRLLGMPPFRPYSMTPGQFLEVEVVQPDGARALVVGKLDAVPDTSGGRALRIVVCDARITALPAR*
Ga0070687_1003432551	3300005343	Switchgrass Rhizosphere	ARWGYATRPTYRIGPGHRLEVEVVQPGTGRALVVGKLDAVPEGAGGLALRIRVCNTRGRPAGGDD*
Ga0070688_1011275311	3300005365	Switchgrass Rhizosphere	MPSRPAYKICPGDRIEVEVVQPDGGRALVVGKLDAVPEGAGGKALRIRVCGAQVRTLSAAQVT*
Ga0070685_115017561	3300005466	Switchgrass Rhizosphere	MPIRPTYRIRPGDRLEVEVVQPDGGRALVAGTLDAVPHAMSGGIALRIRVCAARITVLPAPS*
Ga0068853_1005654423	3300005539	Corn Rhizosphere	MPTRPIYRIRPGHPLQVEIVQPDGGRALVVGKLDAVPKGAGGLALLIRVCDAQVRALPKAG*
Ga0058697_101845792	3300005562	Agave	MPMRPTYSVRPGDRLEVEIVQPDGGRALVVGKLDAVPEVADGRALRIRVCDGQVQALPATS*
Ga0068857_1017486481	3300005577	Corn Rhizosphere	RSERCTVGSMPPFRPYSLMPGQRLEVEIVQPDGGRALVVGKLDAVPEGAGGLALLIRVCDAQVRALPKAG*
Ga0068856_1014494341	3300005614	Corn Rhizosphere	MPSRPAYKICPGDRIEVEVVQPDGGRALVAGVLGEVPETTHGQALRIRVCEAQVRVLPAAS*
Ga0068856_1026843372	3300005614	Corn Rhizosphere	MPSFRPYSLMPGQRLEVEVVQPDSGRALVVGVLDSVPDTTHGRALKIKVRDARVRALPAE
Ga0068861_1010649641	3300005719	Switchgrass Rhizosphere	RPYSLTPGQFLEVEVVQPDGGPALVAGILDAVPETTHGQALRIRVCEAQVRALPAAG*
Ga0068863_1015685192	3300005841	Switchgrass Rhizosphere	MPPFRPYPLRPGQRLEVVQPDGGRALVAGVLGEVPETTHGQALRIRVCEAQVRVLPAAS*
Ga0068858_1022462552	3300005842	Switchgrass Rhizosphere	MPSRPAYKICPGDRIEVEVVQHDGGRALVVGKLDAVPEGAGGKALRIRVCGAQVRTLSAAQVT*
Ga0074051_116370241	3300006572	Soil	MPTVPIYRIRPGDRLEVEVVQPDGGRALVIGKLDAVPEGAGGLALRIRVCDA
Ga0074050_116296512	3300006577	Soil	LTPTVPIYRIRPGGRLEVEVVQPDGGRALVIGKLDAVPEGAGGLALRIRVCDAHVQVLTAEPRP*
Ga0074057_122837652	3300006605	Soil	MPTVPIYRIRPGDRLEVEVVQPDGGRALVIGKLDAVPEGAGGLALRIQVCDAHVQVLTAEPRP*
Ga0079222_100778264	3300006755	Agricultural Soil	MPIRPAYKICPGDRIEVEVVQPDGGRALVGGKLAAVPEGAGGKALRIRVCGAQVRTLSAAQVT*
Ga0075421_1013580883	3300006845	Populus Rhizosphere	MPSLRPTYAICPGDRLEVEVVQPGGGRALVVGKLDAVPEAAGGKALRIRVCEVKVQALPAAVVT*
Ga0075429_1008181291	3300006880	Populus Rhizosphere	TYAICPGDRLEVEVVQPGGGRALVVGKLDAVPEAAGGKALRIRVCEVKVQALPAAVVT*
Ga0111539_100910282	3300009094	Populus Rhizosphere	MPIRPAYKICPGDRIEVEVVQPDGGRALVVGKLDAVPEGAGGKALRIRVCGAQVRTLSAAQVT*
Ga0111539_102346532	3300009094	Populus Rhizosphere	MPTRPIYRIRPGHRLQVEIVQPDGGRALVVGNLDAVPEGAGGLALLIRVCDAQVRALPKAG*
Ga0111539_116598072	3300009094	Populus Rhizosphere	MPFRPAYSICPGDRLEVEVVQPDGGRALVVAKLDAVPEAAGGRALRIVVCDARITVRPARETGQGGAPASGLLP*
Ga0105245_103114281	3300009098	Miscanthus Rhizosphere	MPGQRLEVEVVQPDGGRALVVGVLDSVPDTTHGRALKIKVCDAQVRVLPAG*
Ga0105245_105469532	3300009098	Miscanthus Rhizosphere	MPSFRPYSLMPGQRLEVEVVQPDGGRALVVGVLDPVPDTTHGRALKIKVRDARVRALPAE
Ga0105245_124227291	3300009098	Miscanthus Rhizosphere	MPTRPIYRIRPGDRLEVEVVQSDGGRALVVGKLDAVPEGAGGLALRIRVCDAQVRALPAGGG*
Ga0111538_118989132	3300009156	Populus Rhizosphere	MPTRPIYRIRPGHRLQVEIVQPDGGRALVVGKLDAVPEGAGGLALLIRVCDAQVRALPKAG*
Ga0105249_121011062	3300009553	Switchgrass Rhizosphere	MASSRQAAHADRMPFRPTYAVSLVDRIAAEIVQPDGGRALVIGKLDAVPEAAGALALRIRVCDAHVPALPAVG*
Ga0126308_104663422	3300010040	Serpentine Soil	MPIRPTYSIRPGDRIEVEVVQPDGGRALVAGALDAILETEIGGRTRRIRGCDARATVLPATS*
Ga0126314_104233551	3300010042	Serpentine Soil	MPFRPEYRICPGDRLEVVKPDGGRALVVGKLDAVPEVAGGCAMRIVVCDAQISVLPAK*
Ga0126311_110555372	3300010045	Serpentine Soil	FRPYSLKPGQHLEVEVVRSDGGRALVAGVLDAVPEATHGQALRIRVCDARVQALRAE*
Ga0126306_114757121	3300010166	Serpentine Soil	MSSFRPSYKVCPGDRLEVEVVQPDGGRALVVGKLDAVPLVADGCAMRIVVCEAQISVLPAR*
Ga0105239_108674532	3300010375	Corn Rhizosphere	EMASSRQAAHDDRMPFRPTYAVSLVDRIAAEIVQPDGGRALVIGKLDAVPEAAGALALRIRVCDAHVPALPAVG*
Ga0134126_120569221	3300010396	Terrestrial Soil	MPSFRPYSLMPGQRLEVEVVQPDGGRALVVGVLDPVPDTTHGRALKIKVRDARV
Ga0150985_1011389903	3300012212	Avena Fatua Rhizosphere	RRRRRVGFMAHFRPYSLTPGQRLEVEVVAPDGGRALMVGLLDSVPDTAHGRALKIKVCDANVQALPAS*
Ga0150985_1036437082	3300012212	Avena Fatua Rhizosphere	MPFRPYSLRPGQRLEVEVVQPDGGRALVAGVLEAVPETTHGEALRIRVCAARVQPLAAERSRKAAR*
Ga0150985_1049269992	3300012212	Avena Fatua Rhizosphere	MPLYPTYRIRPGDGLEVEIVQSDGGRALVAGTIDSAPEAAGGLALRIRVCDAQVQALPAVS*
Ga0150985_1056290032	3300012212	Avena Fatua Rhizosphere	MPSLRPTYAVCPGERLEVEVVQPDGGRVLVVGTLGACAGGRRKALRIRVSEAQVRALPAAG*
Ga0150985_1076177291	3300012212	Avena Fatua Rhizosphere	MPFRPSYKICPGDRLEVEVVQPDGGRALVVGKLDAVPKVAGGCAMRIVVCDAQLKVLPAR
Ga0150985_1079995073	3300012212	Avena Fatua Rhizosphere	MPIRPTYRIRPGDRLEVEVVQPDGGRALVAGTLDAVPHAMSGGIALRIRVCDARITVLPAAAS*
Ga0150985_1089210411	3300012212	Avena Fatua Rhizosphere	YSLTPGQRLEVEVVQPDGGRALVAGVLDMVPSAASGQALRIRVREAEVRALPAK*
Ga0150985_1108807381	3300012212	Avena Fatua Rhizosphere	LPFRPYNLRPGQRLEVEVVQPDGGRALVAGVLEAAPETTHGQALRIRVCDALIRALPAAG
Ga0150985_1118678231	3300012212	Avena Fatua Rhizosphere	MPSRRPSYAICPGDRIEVEVVKPDGGRALVVCKLDKVPEAAGGRALRVVVCDAQVSTLPSR*
Ga0150985_1178978231	3300012212	Avena Fatua Rhizosphere	MPSFRPYALRPGQRLEVEVVQPDGGRALVAGVLDAVPETTHGQALRIKVCDARV*
Ga0150985_1180456583	3300012212	Avena Fatua Rhizosphere	MPPFRPYSLKPGQTLEVEVVQPDGGRALVVGVLDAVPETTHGQALRIRVCEAQVRPLPVPGDR*
Ga0150985_1197068591	3300012212	Avena Fatua Rhizosphere	GGPMPSRRPSYAICPGDRIEVEVVRPDGGRALVVGKLDKVPEAAGGRALRVVVCDAQVSALPSR*
Ga0150985_1207462621	3300012212	Avena Fatua Rhizosphere	MPFRPEYRICPGDRLEVEVVQPDGGRALVVGKLDAVPKVAGGCAMRIVVCEAQISVLPAR
Ga0150984_1001944333	3300012469	Avena Fatua Rhizosphere	MPSVRPAYKICPGDRLEVEVVQPDGGRALVVGKLDAVPKVAGGCAMRIVVCDAQLKVLPAR*
Ga0150984_1015991042	3300012469	Avena Fatua Rhizosphere	MPFRPSYTICPGDRLQVEVVQPDGGRALVVGKLDAVPLSAGGVAMRIVIRDAQITALPAR
Ga0150984_1156882853	3300012469	Avena Fatua Rhizosphere	MPPFRPYSLKPGQTLEVEVVQPDGGRALVAGVLDAVPETTHGQALRIRVCEAQVRPLPVPGDR*
Ga0150984_1185301241	3300012469	Avena Fatua Rhizosphere	MLPFRPYNLRPGQRLEVEVVQPDGGRALVAGVLEAAPETTHGQALRIRVCDALIRALPAAG*
Ga0150984_1204273103	3300012469	Avena Fatua Rhizosphere	FRPYSLTPGQRLEVEVVAPDGGRALMVGLLDSVPDTAHGRALKIKVCDANVQARPAS*
Ga0150984_1220053822	3300012469	Avena Fatua Rhizosphere	MPSFRPYALRPGQRLEVEVVQPDGGRALVAGVLEAVPETTHGQALRIRVCDARVQPLPAEP*
Ga0157347_10584001	3300012502	Arabidopsis Rhizosphere	MPTVPIYRMRPGDRLEVEVVQSDGGRALVIGKLDAVPEGAGGWALRIQVCHAHVQGLTAEPRP*
Ga0157286_103671452	3300012908	Soil	MPSPRPTYAICPGGRIEIEVVQPDDGRALVIGKFDAVPEVAGGRALRIRVC
Ga0157301_102694531	3300012911	Soil	MPSLRPTYAICTGGRIEIEVVQPDDGRALVIGKLDAVPEVAGGRALRIRVCDARVQTLPAIG*
Ga0162653_1000509532	3300012937	Soil	MPTRPIFRIRPGDRLEVEVVQPDGGRALVIGKLEAVPEGAGGLALRIRVCDAQVQALPAVG*
Ga0164302_116265011	3300012961	Soil	MPPFRPYSMTPGQFLEVEVVQPDGARALVVGKLDAVPDTSGGRALRIVVCDARITALPAR
Ga0157371_105945521	3300013102	Corn Rhizosphere	MPTRPIYRIRPGHRLQVEIVQPDGGCALVVGKLDAVPEGAGGLALLIRVCDAQVRALPKAG*
Ga0157372_104349653	3300013307	Corn Rhizosphere	MPTRPIYRIRPGDRLEVEVVQSDGGRALVVGKLDAVPEGAGGLALRIRVCVICPALFGPRDFG*
Ga0157377_116245352	3300014745	Miscanthus Rhizosphere	MPPFRPYSLRPGQRLEVEVVQPDGGRALVAGVLDAVPETTHGQALRIRVCEAQVRALPAAG*
Ga0132258_124586632	3300015371	Arabidopsis Rhizosphere	VESVPFRPAYSICPGDRLEVEVVQPDGGRALVVGKLDAVPEVAGGRALRIVVCDARITVRPAREADQGGAPA*
Ga0132256_1002182821	3300015372	Arabidopsis Rhizosphere	RRWCGAGAGGWMPTGPIYRIRPGDRLEVEVVQPDGGRALVIGKLDAVPEGAGGWALLPRVCDAHVQVLTAEPRP*
Ga0132256_1023626431	3300015372	Arabidopsis Rhizosphere	VESVPFRPAYSIRPGDRLEVEVVLPDGGRALVVGKLDAVPEVAGGRALRIVVCDARITVRPAREADQAGAPA*
Ga0132255_1050450772	3300015374	Arabidopsis Rhizosphere	MPLRPSYKICPGDRLEVEVVQPDGGRALVVGKLDAVPEAAGGKALRIRVCEAQVQALPAAS*
Ga0132255_1054150661	3300015374	Arabidopsis Rhizosphere	VESVPFRPAYSICPGDRLEVEVVQPDGGRALVVGKLDAVPEAAGGRALRIVVCDARITVRPAREAGQAGAPT*
Ga0184611_12932911	3300018067	Groundwater Sediment	MSTVPIYRIRPGNRLEVEVVQPDGGRALVIGKLDAVPEGAGGLALRIRVCDAHVQVLTAETRP
Ga0184628_107101541	3300018083	Groundwater Sediment	YSIRPGDRIEVEVVQPDGGRALVAGTLDAVPETETGGRTRRIRVCDARATVLPATS
Ga0190265_117296112	3300018422	Soil	VNGADAICPGDLIEVEVVQCDGGCALVVGKLDTVPEAAGGRALRIVVCDAQITALPAR
Ga0190275_112369802	3300018432	Soil	MPFRPAYQVRPGDRLEVEVVQPDGGRALVVGKLDAVPEAAGGRALRIRVCDAQVHTVPAAGVT
Ga0190268_113215091	3300018466	Soil	MRAVVPQGGPMPSRRPSYAICPGDRIEVEVVQPDGGRALVVGKLDKVPEAAGGRALRVIVCDAQVRALPSQ
Ga0190268_117182752	3300018466	Soil	MPLRPRYAICSGDRIEVEVEVVQPHGARALVVGKLDAVPESAGGPALRIVVRDAHIAALPAQQ
Ga0190270_126266261	3300018469	Soil	MPFRPAYSICPGDRLEVEVVQPDGSRALVVGKLDAVPEAAGGRALRIVVCDAQITVLSAR
Ga0190274_104174071	3300018476	Soil	VPSTRPTYAICPGDRIEVEVVQPDGGRALVVGKLDAVPEVAGGKALQIRVCEAQVRPLPAAG
Ga0190271_105359472	3300018481	Soil	MPSNRPTYAICPGDRLEVEVVQPDGGCALVVGKLDSVPEAAGGRALRIRVCDAQITVLPAQQ
Ga0190271_108863751	3300018481	Soil	MPIRPTYAICPGDLIEVEIVQPDGGRALFVGKLDAVPEAAGGRALRIVVCDAKITVLPAR
Ga0190271_111039162	3300018481	Soil	MPHRPSYKICPGDRLEVEIVQRDGGRALVVGKLDAVPEAAGGRALRIVVCDAQIKALPTR
Ga0190271_111568761	3300018481	Soil	MPIRPTYAICPGDLIEVDVVQCDGGCALVVGKLDTVPEAAGGRALRIVVCDAQITALPAR
Ga0190271_113006432	3300018481	Soil	VPSTRPTYAICPGDRIEVEVVQPDGGRALVVGKLDAVPEVAGGKALQIRICEAQVRPLPAAG
Ga0190271_121958122	3300018481	Soil	MPLRPAYKICPGDRIEVEVVQADGGRALVVGKLDAVPEAAGGKALRIRICEAQVRPLPAA
Ga0190271_134798341	3300018481	Soil	VPTVPIYRIRPGDRLEVEIVQADGGRALVVGKLDAVPEGAGGLALRIRVCDAQVRALPAG
Ga0190273_100235542	3300018920	Soil	VAAHAERMPFRPSYTICPGDRLEVEVVQPDGGRALVVGKLDAVPKVAGGCAMRIVVCDAQIKMLPAR
Ga0190273_100344102	3300018920	Soil	VGVMPPFRPYSLKPGQTLEVEVVQPDGGRALVAGVLDAVPETTHGQTLRIRVCEAQVRPLPVPGDR
Ga0190273_100622441	3300018920	Soil	MPSLRPTYAICHGQRIAVEVVQPDGGRALVVGVLDSVPDATHGRALKIRVCDARVQALEA
Ga0190273_101711114	3300018920	Soil	MPSRRPSYAICPGDRIEVEAVQPDGGRALVIGKLDKVPEAAGGRALRVVVCDAQVSPLPS
Ga0190273_101746903	3300018920	Soil	MPSRRPSYAICPGDRIEVEVVQPDGGRALVVGKLDKVPEAAGGRALRVVVCDAQVSTLPS
Ga0190273_102887692	3300018920	Soil	MLTFRPYSLKPGQRLEVEVVQPGGGRALVAGVLDAVPETTQGQALRIRVCEAQVRSLPVPGDR
Ga0190273_103277061	3300018920	Soil	MPPFRPYALRPGQRLEVEVVQPDGGRALVAGVLDAVPETAHGHALRIRVCDARVQPLRAK
Ga0190273_103738551	3300018920	Soil	YSLKPGQTLEVEVVQPDGGRALVAGVLDAVPETTHGQALRIRVCEAQVRALPVPGDR
Ga0190273_107360842	3300018920	Soil	VPFRPAYKICPGDRLEVEVVQPDGGRALVVGKLDAVPKVAGGCAMKIVVCDAQIKVLPAR
Ga0190273_118648901	3300018920	Soil	MPSFRPYSLRPGQRLEVEVIQPDGGRALVAGVLEAVPETTHGQALRIRVCDAQVRALPAG
Ga0197907_108926281	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	AYKICPGDRIEVEVVQPDGGRALVVGKLDAVPEGAGGKALRIRVCGAQVRALPAAQVT
Ga0207688_100501722	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MQPFRPYSLMPGQRLEVEVVQPDGGRALVVGVLDSVPDTTHGRALKIKVCDAQVRVLPAG
Ga0207688_100997431	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MPTRPIYRIRPGDRLEVEVVQSDGGRALVVGKLDAVPEGAGGLALRIRVCVICPALF
Ga0207688_108354062	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MAPFRPYSLMPGQRLEVEVVQPDGGRAWVIGVLDSVPETAHGRALKIKVCDVRITPLQPE
Ga0207688_110985252	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MPPFRPYPLRPGQRLEVVQPDGGRALVAGVLGEVPETTHGQALRIRVCEAQVRVLPAAS
Ga0207705_108177183	3300025909	Corn Rhizosphere	AGARWGYATRPTYRIGPGHRLAVEVVQPGTGRALVVGKLDAVPEGAGGLALRIRVCNTRGRPAGGDD
Ga0207659_108572882	3300025926	Miscanthus Rhizosphere	PFRPTYAVSLVDRIAAEIVQPDGGRALVIGKLDAVPEAAGALALRIRVCDAHVPALPAVG
Ga0207689_114501691	3300025942	Miscanthus Rhizosphere	MQPFRPYSLMPGQRLEVEVVQPDGGRALVVGVLDSVPDTTHGRALKIKV
Ga0207648_113223073	3300026089	Miscanthus Rhizosphere	YKICPGDRIEVEVVQPDGGRALVVGKLDPVPEAAGGKALRVVVCDAQISMLPAR
Ga0207676_123105121	3300026095	Switchgrass Rhizosphere	MPFRPTYAVSLVDRIAAEIVQPDGGRALVIGKLDAVPEAAGALALRIRVCDAHARASSS
Ga0207683_108462142	3300026121	Miscanthus Rhizosphere	MPIRPAYKICPGDRIEVEVVQPDGGRALVVGKLDAVPEGAGGKALRIRVCGAQVRTLSAAQVT
Ga0209574_100431411	3300027809	Agave	MPLRATYGICPGNRIEVEIVQPDGGRALVVGKLDAVPESAGGRALRVRVCDARVTPLPAE
Ga0268266_121642212	3300028379	Switchgrass Rhizosphere	MPFRPYSLRPGQRLEVEVVQPDGGRALVAGVLEAVPETTHGQALRIRVCDALITALPAAG
Ga0247821_100598784	3300028596	Soil	MPTVPIYRIRPGDRLEVEIVQADGGRALVVGKLDAVPEGAGGLALRIRVCDAQVRALPAG
Ga0247821_106038311	3300028596	Soil	MPFRPAYSICPGDRLEVEVVQPDGGRALVVGKLVAVPEAAGGRALRIVVCDARITVRPAREAGQAGAPT
Ga0307297_101178311	3300028754	Soil	MPFRPAYKICPGDRIEVEVVQPDGGRALVVGKLDAVPEAAGGRALRIVVCVAYIAALPAQ
Ga0307289_104065311	3300028875	Soil	MRPSYAVCPGDRIEVEVVQRDGGRALVAGKLDAVPEAAGGCALRIVLCDARVSPLPPRR
Ga0247826_110577061	3300030336	Soil	MPSNRPTYGICPGDRLEVEVVQPDGGCALVVGKLDSVPEAAGGRALRIRVCDAQITVLPAQQW
Ga0247826_111340732	3300030336	Soil	VSRPYATLSPGQRLEVEVVQPDGGRALVVGKLDAVPEAAGGQALRIVVCDARITALPAR
Ga0268243_10308842	3300030510	Soil	MPLRPTYGICPGNRIEVEIVQPDGGRALVVGKLDAVPESAGGRALRVHVCDARVTPLPAE
Ga0308175_1001548152	3300031938	Soil	MPIRPAYKICPGDRIEVEVVQPDGGRALVVGKLDAVPEAAGGKALRIRVCDAQVQALPAERGRKAAG
Ga0308175_1019983432	3300031938	Soil	MRPAYKICPGERLELEVVQPDGGRVLVIGKLEAVPQVAGGRALRIRVCEARVQALPATG
Ga0307414_116002321	3300032004	Rhizosphere	PTVPTYKICPGHSIEVVVPTPDGGRALVVGALDAVPVAASGGVALRVVVAGARVTSLPAG
Ga0334936_118407_307_489	3300034007	Biocrust	MSPFRPYSLSPGQRIDAEVVQPDGGRALVAGVLEAVPGTTHRRAVKIRVCKAQVRALPRL
Ga0334940_041958_73_258	3300034025	Biocrust	MPLRPSYKIYPGDRIEVEIVQPDGGRALVAGVLEAVPETTHGQALRIRVCDAQVRALPPA
Ga0334951_179770_68_250	3300034029	Biocrust	MSPFRPYSLSPGQRIEAEAVQPDGGRALVAGVLEAVPGTTHRRAVKIRVCKAQVRALPRL
Ga0364931_0082586_42_233	3300034176	Sediment	MPTVPIYRIRPGGRLEVEVVQPDGGRALVIGKLDAVPEGAGGLALRIRVCDAHVQVLTAKPQP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064704

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences