Metagenome / Metatranscriptome Family F064777

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064777
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	68 residues
Representative Sequence	MWLAGWAVRVLLLITAPIFYLCRAVAGSMSSLDDWSWRAIHAGEMRKPPQSETAQKQPQPSAKRILP
Number of Associated Samples	59
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.59 %
% of genes near scaffold ends (potentially truncated)	18.75 %
% of genes from short scaffolds (< 2000 bps)	73.44 %
Associated GOLD sequencing projects	53
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.938 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (40.625 % of family members)
Environment Ontology (ENVO)	Unclassified (56.250 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.594 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 42.11% β-sheet: 0.00% Coil/Unstructured: 57.89%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF01557	FAA_hydrolase	17.97
PF01134	GIDA	15.62
PF07617	DUF1579	7.03
PF11146	DUF2905	3.91
PF01546	Peptidase_M20	3.12
PF02566	OsmC	2.34
PF11373	DUF3175	2.34
PF08308	PEGA	2.34
PF08448	PAS_4	1.56
PF10518	TAT_signal	1.56
PF08238	Sel1	0.78
PF08281	Sigma70_r4_2	0.78
PF11127	DUF2892	0.78
PF00208	ELFV_dehydrog	0.78
PF00877	NLPC_P60	0.78
PF13560	HTH_31	0.78
PF13181	TPR_8	0.78
PF04216	FdhE	0.78
PF01053	Cys_Met_Meta_PP	0.78
PF07687	M20_dimer	0.78
PF00210	Ferritin	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	2.34
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	2.34
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.78
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.78
COG0334	Glutamate dehydrogenase/leucine dehydrogenase	Amino acid transport and metabolism [E]	0.78
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.78
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.78
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.78
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.78
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.78
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.78
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.78
COG2902	NAD-specific glutamate dehydrogenase	Amino acid transport and metabolism [E]	0.78
COG3058	Formate dehydrogenase maturation protein FdhE	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.94 %
Unclassified	root	N/A	39.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.94 %
Unclassified	root	N/A	39.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.94 %
Unclassified	root	N/A	39.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.06 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	15.62 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.06 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.03 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.56 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.06 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.69 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.34 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.06 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.69 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	2.34 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.06 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	2.34 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.34 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.06 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	2.34 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.34 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10008541	All Organisms → cellular organisms → Bacteria	6990	Open in IMG/M
3300000567\|JGI12270J11330_10067823	All Organisms → cellular organisms → Bacteria	1798	Open in IMG/M
3300000567\|JGI12270J11330_10174539	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300001356\|JGI12269J14319_10075155	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1835	Open in IMG/M
3300001356\|JGI12269J14319_10105952	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1358	Open in IMG/M
3300004080\|Ga0062385_10646322	Not Available	675	Open in IMG/M
3300006354\|Ga0075021_10159820	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300009520\|Ga0116214_1026705	All Organisms → cellular organisms → Bacteria	2068	Open in IMG/M
3300009521\|Ga0116222_1090139	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300009522\|Ga0116218_1063445	All Organisms → cellular organisms → Bacteria	1680	Open in IMG/M
3300009672\|Ga0116215_1295657	Not Available	704	Open in IMG/M
3300010343\|Ga0074044_10066019	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	2454	Open in IMG/M
3300010379\|Ga0136449_100094008	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6209	Open in IMG/M
3300010379\|Ga0136449_100401912	All Organisms → cellular organisms → Bacteria	2431	Open in IMG/M
3300010379\|Ga0136449_100405557	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	2416	Open in IMG/M
3300010379\|Ga0136449_100831924	All Organisms → cellular organisms → Bacteria	1519	Open in IMG/M
3300014156\|Ga0181518_10017509	All Organisms → cellular organisms → Bacteria	5076	Open in IMG/M
3300017821\|Ga0187812_1015597	All Organisms → cellular organisms → Bacteria → Acidobacteria	2625	Open in IMG/M
3300017821\|Ga0187812_1054482	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300017823\|Ga0187818_10029468	All Organisms → cellular organisms → Bacteria → Acidobacteria	2354	Open in IMG/M
3300017823\|Ga0187818_10066618	All Organisms → cellular organisms → Bacteria → Acidobacteria	1551	Open in IMG/M
3300017823\|Ga0187818_10172090	Not Available	944	Open in IMG/M
3300017823\|Ga0187818_10197999	Not Available	877	Open in IMG/M
3300017928\|Ga0187806_1091240	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300017928\|Ga0187806_1246412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300017928\|Ga0187806_1322213	Not Available	549	Open in IMG/M
3300017930\|Ga0187825_10204898	Not Available	711	Open in IMG/M
3300017932\|Ga0187814_10149519	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300017932\|Ga0187814_10250928	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300017933\|Ga0187801_10173109	Not Available	848	Open in IMG/M
3300017933\|Ga0187801_10311498	Not Available	642	Open in IMG/M
3300017934\|Ga0187803_10085411	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300017934\|Ga0187803_10271932	Not Available	673	Open in IMG/M
3300017934\|Ga0187803_10298696	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300017934\|Ga0187803_10382103	Not Available	569	Open in IMG/M
3300017934\|Ga0187803_10415314	Not Available	546	Open in IMG/M
3300017939\|Ga0187775_10096288	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300017942\|Ga0187808_10310589	Not Available	712	Open in IMG/M
3300017943\|Ga0187819_10074730	All Organisms → cellular organisms → Bacteria	2019	Open in IMG/M
3300017943\|Ga0187819_10177310	All Organisms → cellular organisms → Bacteria → Acidobacteria	1263	Open in IMG/M
3300017943\|Ga0187819_10435709	Not Available	751	Open in IMG/M
3300017955\|Ga0187817_11023336	Not Available	529	Open in IMG/M
3300017959\|Ga0187779_10032839	All Organisms → cellular organisms → Bacteria	2990	Open in IMG/M
3300017961\|Ga0187778_10006829	All Organisms → cellular organisms → Bacteria	7329	Open in IMG/M
3300017961\|Ga0187778_10018249	All Organisms → cellular organisms → Bacteria → Acidobacteria	4306	Open in IMG/M
3300017961\|Ga0187778_10043500	Not Available	2746	Open in IMG/M
3300017961\|Ga0187778_10111977	All Organisms → cellular organisms → Bacteria	1702	Open in IMG/M
3300017961\|Ga0187778_10566617	Not Available	759	Open in IMG/M
3300017961\|Ga0187778_10632443	Not Available	719	Open in IMG/M
3300017961\|Ga0187778_10755458	Not Available	661	Open in IMG/M
3300017961\|Ga0187778_11189024	Not Available	534	Open in IMG/M
3300017966\|Ga0187776_10003468	All Organisms → cellular organisms → Bacteria	8093	Open in IMG/M
3300017966\|Ga0187776_10043993	All Organisms → cellular organisms → Bacteria	2523	Open in IMG/M
3300017970\|Ga0187783_10062874	All Organisms → cellular organisms → Bacteria → Proteobacteria	2738	Open in IMG/M
3300017972\|Ga0187781_10438648	Not Available	934	Open in IMG/M
3300017973\|Ga0187780_10085083	All Organisms → cellular organisms → Bacteria	2175	Open in IMG/M
3300017973\|Ga0187780_10111836	All Organisms → cellular organisms → Bacteria	1883	Open in IMG/M
3300017973\|Ga0187780_10380041	Not Available	1000	Open in IMG/M
3300017974\|Ga0187777_10582070	Not Available	787	Open in IMG/M
3300017975\|Ga0187782_10020421	All Organisms → cellular organisms → Bacteria	4831	Open in IMG/M
3300017975\|Ga0187782_10973127	All Organisms → cellular organisms → Bacteria → Proteobacteria	659	Open in IMG/M
3300018001\|Ga0187815_10157980	Not Available	959	Open in IMG/M
3300018006\|Ga0187804_10004901	All Organisms → cellular organisms → Bacteria	4270	Open in IMG/M
3300018006\|Ga0187804_10264093	Not Available	745	Open in IMG/M
3300018007\|Ga0187805_10115091	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300018012\|Ga0187810_10411285	Not Available	569	Open in IMG/M
3300018012\|Ga0187810_10436397	Not Available	554	Open in IMG/M
3300018058\|Ga0187766_11068220	Not Available	578	Open in IMG/M
3300018062\|Ga0187784_10579119	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300018062\|Ga0187784_10706383	Not Available	807	Open in IMG/M
3300018062\|Ga0187784_11579238	Not Available	519	Open in IMG/M
3300018085\|Ga0187772_10098543	All Organisms → cellular organisms → Bacteria	1879	Open in IMG/M
3300018085\|Ga0187772_10261357	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300018085\|Ga0187772_11112845	Not Available	580	Open in IMG/M
3300018086\|Ga0187769_10010083	All Organisms → cellular organisms → Bacteria	5995	Open in IMG/M
3300018086\|Ga0187769_10035936	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3390	Open in IMG/M
3300018086\|Ga0187769_10164190	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300018086\|Ga0187769_10463061	Not Available	956	Open in IMG/M
3300018086\|Ga0187769_10936804	Not Available	655	Open in IMG/M
3300018086\|Ga0187769_11021758	Not Available	626	Open in IMG/M
3300018086\|Ga0187769_11305667	Not Available	549	Open in IMG/M
3300018088\|Ga0187771_10011896	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6331	Open in IMG/M
3300018088\|Ga0187771_10180467	All Organisms → cellular organisms → Bacteria → Acidobacteria	1746	Open in IMG/M
3300018088\|Ga0187771_10262084	Not Available	1443	Open in IMG/M
3300018088\|Ga0187771_10546095	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300018088\|Ga0187771_10636522	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300018088\|Ga0187771_10787299	Not Available	807	Open in IMG/M
3300018088\|Ga0187771_11612230	Not Available	551	Open in IMG/M
3300018089\|Ga0187774_10063484	All Organisms → cellular organisms → Bacteria	1691	Open in IMG/M
3300018090\|Ga0187770_10002366	All Organisms → cellular organisms → Bacteria	10544	Open in IMG/M
3300018090\|Ga0187770_10033008	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3634	Open in IMG/M
3300018090\|Ga0187770_10113208	All Organisms → cellular organisms → Bacteria → Acidobacteria	2038	Open in IMG/M
3300018090\|Ga0187770_10136732	All Organisms → cellular organisms → Bacteria → Acidobacteria	1859	Open in IMG/M
3300018090\|Ga0187770_10624651	Not Available	857	Open in IMG/M
3300018090\|Ga0187770_10874142	Not Available	721	Open in IMG/M
3300018090\|Ga0187770_10931060	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300018090\|Ga0187770_11025684	Not Available	664	Open in IMG/M
3300018090\|Ga0187770_11771188	Not Available	505	Open in IMG/M
3300018090\|Ga0187770_11811642	Not Available	500	Open in IMG/M
3300019284\|Ga0187797_1022964	Not Available	581	Open in IMG/M
3300027570\|Ga0208043_1031445	All Organisms → cellular organisms → Bacteria	1635	Open in IMG/M
3300027604\|Ga0208324_1031957	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300027625\|Ga0208044_1081365	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300027641\|Ga0208827_1027744	All Organisms → cellular organisms → Bacteria	2042	Open in IMG/M
3300027662\|Ga0208565_1113189	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300027698\|Ga0209446_1132370	Not Available	644	Open in IMG/M
3300027894\|Ga0209068_10155354	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300027905\|Ga0209415_10511905	Not Available	920	Open in IMG/M
3300032783\|Ga0335079_10008698	All Organisms → cellular organisms → Bacteria → Acidobacteria	11578	Open in IMG/M
3300032783\|Ga0335079_10036364	All Organisms → cellular organisms → Bacteria	5655	Open in IMG/M
3300032783\|Ga0335079_10357823	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300032783\|Ga0335079_10484579	Not Available	1321	Open in IMG/M
3300032783\|Ga0335079_12311065	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300032805\|Ga0335078_10203595	All Organisms → cellular organisms → Bacteria	2745	Open in IMG/M
3300032805\|Ga0335078_11401784	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300032805\|Ga0335078_11428298	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300032805\|Ga0335078_11694939	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300032829\|Ga0335070_10182905	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2101	Open in IMG/M
3300032892\|Ga0335081_10065891	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5577	Open in IMG/M
3300032892\|Ga0335081_10242486	All Organisms → cellular organisms → Bacteria	2442	Open in IMG/M
3300032892\|Ga0335081_11572865	Not Available	724	Open in IMG/M
3300032892\|Ga0335081_11715037	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300032893\|Ga0335069_10739151	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1114	Open in IMG/M
3300032955\|Ga0335076_10898809	Not Available	767	Open in IMG/M
3300033158\|Ga0335077_10096851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3469	Open in IMG/M
3300033433\|Ga0326726_11462974	Not Available	665	Open in IMG/M
3300033808\|Ga0314867_079022	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300033808\|Ga0314867_142801	Not Available	560	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.66%
Aquatic	Environmental → Aquatic	27.34%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.88%
Freshwater	Environmental → Aquatic → Freshwater	25.78%
Sediment	Environmental → Aquatic → Sediment	1.56%
Peat	Environmental → Terrestrial → Peat	0.78%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	57.03%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	25.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	14.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	57.03%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	23.44%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.84%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	40.62%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	23.44%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	14.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	13.28%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	2.34%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.78%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.78%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100085412	3300000567	Peatlands Soil	MWLAGWAVRVLLLITAPIFYLCRAVAGSMSRLDDWSWRAIHSGEMRKPPQSETAQKQPQQSAKRILP*
JGI12270J11330_100678231	3300000567	Peatlands Soil	MWLAGWAVRVLLLITAPIFYLCRAVAGSISTLDDWSWRAIHSGEMRKPPQSETAQKQPQPSAKRILR*
JGI12270J11330_101745392	3300000567	Peatlands Soil	MWLAGWAVRVLLLITAPIFYLCRAVAGSMSSLDDWSWRAIHAGEMRKPPQSETAQKQPQRSTKRILP*
JGI12269J14319_100751554	3300001356	Peatlands Soil	MWLAGWAVRVLLLITAPIFYLCRAVAGSMSRLDDWSWRAIHSGEMRKPPQSETAQKQPQQSAKRILR*
JGI12269J14319_101059523	3300001356	Peatlands Soil	MWLAGWAVRVVLLITAPIFYLCRAVAGSMSSLDDWSWRAIHAGEMKKPPQSETAQKQPQQSAKRILP
Ga0062385_106463222	3300004080	Bog Forest Soil	MWLAGWAVRVLLLITAPIFYLCRAVAGSMSSLDDWSWRAIHAGEMRKPPQSETAQKQPQPSAKRILP*
Ga0075021_101598202	3300006354	Watersheds	MWLAGWAVRVVLLITAPIYYLCRFVAGLMSRLDEWSWSAIHAGELRKPPQSETAQKQPERAAKRTLL*
Ga0116214_10267054	3300009520	Peatlands Soil	MIRSPSEATMWLAGWAVRVLLLITAPIFYLCRAVAGSMSSLDDWSWRAIHAGEMRKPPQSETAQKQPQRSTKRILP*
Ga0116222_10901392	3300009521	Peatlands Soil	MIRSPAEATMWLAGWAVRVLLLITAPIFYLCRAVAGSMSSLDDWSWRAIHAGEMRKPPQSETAQKQPQRSTKRILP*
Ga0116218_10634452	3300009522	Peatlands Soil	MIRSPSEATMWLAGWAVRVLLLITAPIFYLCRAVAGSMSRLDDWSWRAIHSGEMRKPPQSETAQKQPQQSAKRILP*
Ga0116215_12956572	3300009672	Peatlands Soil	SPSEATMWLADWAVRVLLLITAPIFYLCRAVAGSMSRLDDWSWRAIHSGEMRKPPQSETAQKQPQQSAKRILP*
Ga0074044_100660193	3300010343	Bog Forest Soil	MIRSPSEATMWLAGWAVRVLLLIAAPIFYLCRAVAGSMSSLDDWSWRAIHAGEMKKPPQSETAQKQPQQSAKRILP*
Ga0136449_1000940082	3300010379	Peatlands Soil	MIRSPAEATMWLAGWAVRVLLLITAPIFYLCRAVAGSISTLDDWSWRAIHSGEMRKPPQSETAQKQPQPSAKRILR*
Ga0136449_1004019121	3300010379	Peatlands Soil	MIRSPSEATMWLAGWAVRALLLITAPIFYLCRAVAGSMSSLDDWSWRAIHSGEMKKPPQSETAQKQPQQSAKRILP*
Ga0136449_1004055574	3300010379	Peatlands Soil	MWLAGWAVRVVLLITAPIFYLCRAVAGSMSSLDDWSWRAIHAGEMKKPPQSETAQKQPQQSAKRILP*
Ga0136449_1008319242	3300010379	Peatlands Soil	MIRSPAEATMWLAGWAVRVLLLITAPIFYLCRAVAGSMSSLDDWSWRAIHAGEQRKPPQSETAQKQPQQSAKRILP*
Ga0181518_100175092	3300014156	Bog	MWLAGWAVRVVLLIAAPIFYLCRAVAGSMSSLDDWSWRAIHAGEMKKPPQSETAQKQPQQSAKRILP*
Ga0187812_10155972	3300017821	Freshwater Sediment	MWLAGWAVRVLLLITAPIFYLCRAVAASMSSLDDWSWRAIHAGEMRKPPQSETAQKQPQRSAKRILP
Ga0187812_10544823	3300017821	Freshwater Sediment	MKLAGWAVRVLLLIAAPVYYLSRFVAKGMSSLDEWSWRAIHAGYRKKPPQSETAKGQPQPSARRIL
Ga0187818_100294684	3300017823	Freshwater Sediment	MWLAGWAVRVLLLIAAPIFYLCRFMSQAMSRLDDWSWRAIHVGDLKKPPQSETAQKQPQQSVKRILP
Ga0187818_100666184	3300017823	Freshwater Sediment	MWLAGWAVRVLLLITAPIYYLCRFVARSMSTLDTWSWRAIHAHDLKKPPQSETAQNQHQRSARKTLL
Ga0187818_101720902	3300017823	Freshwater Sediment	MKLAGWAVRVLLLITAPVYYLCRFVAKGMSSLDEWSWRAIHAGDRKKPPQSETAEGEPQPSARRIL
Ga0187818_101979992	3300017823	Freshwater Sediment	MWLAGWAVRVLLLITAPIYYLCRFVARLMSSLDDWSWRAIHTRDLKKPPQSETAQEQPHQSAKRTLR
Ga0187806_10912402	3300017928	Freshwater Sediment	MWLAGWAVRVLLLITAPIFYLCRAVAASMSSLDDWSWRAIHAGEMRKPPQSETAQKQPQQSVKRILP
Ga0187806_12464122	3300017928	Freshwater Sediment	MKLAGWAVRVLLLITAPVYYLCRFVAKGMSSLDEWSWRAIHAGDRKKPPQSETAEGQPQPSARRILLACFIHES
Ga0187806_13222131	3300017928	Freshwater Sediment	MMRGPSEAAMKLAGWAVRVLLLIAAPVYYLSRFVAKGMSSLDEWSWRAIHAGYGKKPPQSETAEGQPQPSARRIL
Ga0187825_102048982	3300017930	Freshwater Sediment	RSPSEATMWLAGWAVRVLLLITAPIFYLCRFMSQAMSSLDDWSWRAIHAGDLKKPPQSETAQKQPQQSAKRILP
Ga0187814_101495191	3300017932	Freshwater Sediment	MWLAGWAVRVLLLITAPIYYLCRFVARSMSTLDTWSWRAIHAHDLKKPPQSETAQNQHQRSAR
Ga0187814_102509282	3300017932	Freshwater Sediment	MWLAGWAVRVLLLITAPIYYLCRFVADAMSRLDEWSWRAIHGHGLKKPPQSDTAQKQPQRSVKRTLP
Ga0187801_101731091	3300017933	Freshwater Sediment	MWLAGWAVRVLLLIAAPIFYLCRFMSQAMSRLDDWSWRAIHVGDLKKPPQSETAQKQPQHSVKRILP
Ga0187801_103114983	3300017933	Freshwater Sediment	RSPSEATMKLAGWAVRVLLLITAPVYYLCRFVAKGMSSLDEWSWRAIHAGDRKKPPQSETAEGEPQPSARRIL
Ga0187803_100854112	3300017934	Freshwater Sediment	MWLAGWAVRVLLLITAPIFYLCRFMSQAMSRLDDWSWRAIHVGDLKKPPQSETAHKQPQQTVKRILP
Ga0187803_102719322	3300017934	Freshwater Sediment	AVRVLLLITAPVFYLCRVVAGSMSSLDDWSWHAIHAGEIRKPPQSETAQKQPQQSVKRIL
Ga0187803_102986961	3300017934	Freshwater Sediment	MWLAGWAVRVLLLITAPIFYLCRAVAGSMSRLDDWSWRAIHVGDLKKPPRSETAPKQP
Ga0187803_103821032	3300017934	Freshwater Sediment	MWLAGWAVRVLLLITAPIYYLCRAVAASMSRLDEWSWRAIHAGELKKPPQSETAQQQPQRSAKRILP
Ga0187803_104153142	3300017934	Freshwater Sediment	MWLAGWAVRVLLLITAPIFYLCRFVSQAMSSLDDWSWRAIHSGEMKKPPQSETAQKQPQRSAKRILP
Ga0187775_100962882	3300017939	Tropical Peatland	MWLAGWTVRVLLLITAPLYYLCRFVAQAMSDLDEWSWRAIHSQGLKKPPQSETPREQPQRSAKRLLR
Ga0187808_103105892	3300017942	Freshwater Sediment	MWLAGWAVRVLLLTTAPVYYLCRFVAKGMSSLDEWSWRAIHAGDLKKPPQSETAEGEPQPSARRIL
Ga0187819_100747303	3300017943	Freshwater Sediment	MKLAGWAVRVLLLVTAPVYYLCRFVAKGMSSLDDWSWRAIHAGDRKKPPQSETAEGQPQPSARRIL
Ga0187819_101773102	3300017943	Freshwater Sediment	MWLAGWAVRVLLLITAPIYYLCRFVARSMSTLDAWSWRAIHAHDLKKPPQSETAQNQHQRSARKTLL
Ga0187819_104357091	3300017943	Freshwater Sediment	MWLAGWAVRVLLLITAPIFYLCRAVAGSMSSLDDWSWRAIHAGEQRKPPQSETAQKQPQQSAKRILP
Ga0187817_110233362	3300017955	Freshwater Sediment	MIRSPAEATMWLAGWAVRVLLLITSPIFYLCRAVAGTMSWLDDWSWRAIHAGEPKKPPQSETAQA
Ga0187779_100328393	3300017959	Tropical Peatland	MWLAGWAVRVLLLIAAPLYYLCRFVAVAMSGLDEWSWRAIHGTGLKKPPQSETARKQPQQSVKRTLP
Ga0187778_100068295	3300017961	Tropical Peatland	MWLAGWAVRVLLLIAAPIYYLCRFVAVAMSGLDEWSWRAIHGTGLKKPPQSETAQKQPQQSIKRTLP
Ga0187778_100182492	3300017961	Tropical Peatland	MWLAGWVVRVLLLITAPIFYLCRAVAGTMSRLDDWSWRAIRAGEPKKPPRSETAQAQGARRMLP
Ga0187778_100435004	3300017961	Tropical Peatland	MRLAGWAVRVLLLITAPVYYLSRFIAEQMSSLDEWSWRAIYARDRKKPPQSETAEGQPQPRARRIL
Ga0187778_101119773	3300017961	Tropical Peatland	MWLAGWAVRVLLLITAPIYYLCRFVAETMSGLDAWSWRAIHGHGFKKPPQSETAQKQPQRSVKRTLP
Ga0187778_105666172	3300017961	Tropical Peatland	MMRSPSEATMWLAGWAVRVLLLITAPLYYLCRFVAKGMSSLDEWSWRAIHAGDLKKPPQSETAEGQPQPSARRIL
Ga0187778_106324431	3300017961	Tropical Peatland	MWLAGWAVRMLLLITAPLYYLCRFVAETMSGLDEWSWRAIHGHGLKKPPQSETAQKQSTRSVKRTLP
Ga0187778_107554581	3300017961	Tropical Peatland	IRSPWEATMRLAGWAVRVLLLVTAPVFYLCRLVAEGMSRLDEWSWRAIHGYGVKKSPQSETAQQQPERSVRQTLP
Ga0187778_111890242	3300017961	Tropical Peatland	MRLAGWAVRVLLLITAPIFYLCRFVAECMSSLDEWSWRAIHRHGVKKPPQSETAQ
Ga0187776_100034688	3300017966	Tropical Peatland	MLLAGWTVRVLLLITAPLYYLCRFVAQAMSDLDEWSWRAIHSQGLKKPPQSETPREQPQRSAKRLLR
Ga0187776_100439931	3300017966	Tropical Peatland	MWLAGWTVRVLLLITAPLYYLCRFVAEAMSSLDEWSWRAIHSRGLKKPPQSETAREQPRRIAKRLLR
Ga0187783_100628743	3300017970	Tropical Peatland	MRLAGWAVRVLLLITAPIFYLCRFVAEGMSRLDEWSWRAIHGHGVKKPPQSETAQQQPERSVRRTLP
Ga0187781_104386482	3300017972	Tropical Peatland	MWLAGWAVRLLLLITAPIFYLCRFTTDVMTRLDDWSWRAIHAGEMRKPPQPETAHREPQPTAKRFLR
Ga0187780_100850832	3300017973	Tropical Peatland	MIRSPAEATMWLAGWVVRVLLLITAPIFYLCRAVAGTMSRLDDWSWRAIRAGEPKKPPRSETAQAQGARRMLP
Ga0187780_101118363	3300017973	Tropical Peatland	VRLAGWAVRVLLLITAPVYYLSRFIAEQMSSLDEWSWRAIYARDRKKPPQSETAEGQPQP
Ga0187780_103800411	3300017973	Tropical Peatland	MWLAGWAVRVLLLITAPLYYLCRFVAKGMSSLDEWSWRAIYARDRKKPPQSETAEGQPQP
Ga0187777_105820702	3300017974	Tropical Peatland	MRSPSEAIVRLAGWAVRVLLLITAPVYYLSRFIAEQMSSLDEWSWRAIYARDRKKPPQSETAEGQPQPRARRIL
Ga0187782_100204214	3300017975	Tropical Peatland	MKLAGWAVRVLLLITAPVYYLCRFVAKGMSSLDEWSWRAIHAGDLKKPPQSETAEGQPQPSARRIL
Ga0187782_109731272	3300017975	Tropical Peatland	MRLAGWAVRVLLLITAPIFYLCRFVAEGMSRLDEWSWRAIHGHGVKKPPQSETAQQQPERSVRQTLP
Ga0187815_101579802	3300018001	Freshwater Sediment	MWLAGWAVRVLLLITAPVYYLCRFVAKGMSSLDEWSWRAIHAGDRKKPPQSETAEVQPQPSARRIL
Ga0187804_100049011	3300018006	Freshwater Sediment	SPLEATMWLAGWAVRVLLLITAPIYYLCRFVARLMSSLDDWSWRAIHAGEMRKPPQSETAQKQPQRSAKRILP
Ga0187804_102640932	3300018006	Freshwater Sediment	VLLLITAPVYYLCRFVAKGMSSLDEWSWRAIHAGDRKKPPQSETAEGEPQPSARRIL
Ga0187805_101150913	3300018007	Freshwater Sediment	MIRSPSEATMWLAGWAVRVLLLITAPIFYLCRAVAASMSSLDDWSWRAIHAGEMRKPPQSETAQKQPQRSAKRILP
Ga0187810_104112851	3300018012	Freshwater Sediment	MWLAGWAVRVLLLITAPIYYLCRFVARSMSSLDAWSWRAIHAHDLKKPPQSETAQKQPQPSARKTLL
Ga0187810_104363972	3300018012	Freshwater Sediment	LLLIAAPIFYLCRFMSQAMSRLDDWSWRAIHVGDLKKPPQSETAQKQPQQSVKRILP
Ga0187766_110682202	3300018058	Tropical Peatland	MWLAGWAVRVLLLITAPIYYLCRFVARSMSGLDEWSWRAIHARDLKKPPQPETAQEQQPQRSAKRTPR
Ga0187784_105791193	3300018062	Tropical Peatland	MWLAGWAVRVLLLITAPIFYLCRFTTDVMTKLDDWSWRAIHAGEMKKPPQPEIAQNERQQSAKRFLR
Ga0187784_107063832	3300018062	Tropical Peatland	MRSPSEATMKLAGWAVRVLLLITAPVYYLCRFVAKGMSSLDEWSWRAIHAGDLKKPPQSETAEGQPQPSARRIL
Ga0187784_115792381	3300018062	Tropical Peatland	MWLAGWAVRVLLLITAPIFYLCRFVAEGMSRLDEWSWSAIHGHGLKKPPQSETTQKQPERSARGRYPRSPSPALCRSTAPPP
Ga0187772_100985432	3300018085	Tropical Peatland	MRLAGWAVRVLLLITAPVFYLCRFVAEGMSRLDEWSWRAIHGHGVKKPPQSETAQQQPERSVRRTLP
Ga0187772_102613571	3300018085	Tropical Peatland	MWLAGWAVRVLLLITAPLFYLCRFTTDVMTRLDDWSWRAIHAGEMKKPPQPKTAQSEPQPSAKRLLR
Ga0187772_111128451	3300018085	Tropical Peatland	MWLAGWAVRVLLLITAPIFYLCRFTTDVMTRLDDWSWRAIHAGEMRKPPQPETAQREPQPSAKRFLR
Ga0187769_100100833	3300018086	Tropical Peatland	MRLAGWVVRVLLLITAPVYYLSRFIAKQMSSLDEWSWRAIHAGDRKKPPQSETAEGQPQPRARGIL
Ga0187769_100359364	3300018086	Tropical Peatland	VWLAGWAVRVLLLITAPIYYLCRFVAQVLSHLDTWSWTAIHAHERKKPPQSETLAQQPQRDAKKTLL
Ga0187769_101641904	3300018086	Tropical Peatland	MRLAGWAVRVLLLITAPLFYLCRAVVASMSRLDDWSWHAIHSGEMKKPPQSETAQKQPQQSVKRIPP
Ga0187769_104630612	3300018086	Tropical Peatland	MWLAGWAVRVLLLITAPIFYLCRFTTDVMTKLDDWSWRAIHSGEMKKPPQPEIAQNERQQSAKRFLR
Ga0187769_109368042	3300018086	Tropical Peatland	MRTPSEATMKLAGWAVRVLLLITAPVYYLCRFVAKGMSGLDEWSWRAIHAGDLKKPPQSETAEGQPQPSARRIL
Ga0187769_110217582	3300018086	Tropical Peatland	MWLAGWAVRVLLLITAPLYYLCRFVAETMSGLDAWSWRAIHGHGLKKPPQSEMAQKQPQRSVKRTLP
Ga0187769_113056671	3300018086	Tropical Peatland	SMIRSPSEATMRLAGWAVRVLLLITAPIFYLCGFVAEGMSRLDEWSWRAIHGHGVKKPPQSETVQQQPERSVRRTLP
Ga0187771_100118964	3300018088	Tropical Peatland	MRLAGWAVRVLLLITAPIFYLCRFVAERMSSLDEWSWRAIHRHGVKKPPQSETAQKPEGSVKRTLP
Ga0187771_101804672	3300018088	Tropical Peatland	MWLAGWAVRVLLLITAPLYYLCRFVAETMSGLDAWSWRAIHGHGLKKPPQSETAQKQPQRSVKRTLP
Ga0187771_102620843	3300018088	Tropical Peatland	MRLAGWVVRVFLLITAPVYYLCRFVAKGMSRLDDWSWRAIHAGDAKKPPQSETAESTQQNARRTV
Ga0187771_105460952	3300018088	Tropical Peatland	MMRSPSETIMRLAGWVVRVLLLITAPVYYLSRFIAKQMSSLDEWSWRAIHAGDRKKPPQSETAEGQPQPRARGIL
Ga0187771_106365221	3300018088	Tropical Peatland	MWLAGWAVRVLLLITAPLFYLCRAVAASMSRLDDWSWRAIHSGEMKKPPQSETVQKQPQQSAKKILP
Ga0187771_107872992	3300018088	Tropical Peatland	MWLAGWAMRVLLLITSPVYYLCRCVAEAMSRLDEWSWRTIHGHGLKKPPQSETTQQQSQRSVKRTLP
Ga0187771_116122301	3300018088	Tropical Peatland	MRLAGWAVRVLLLITAPVFYLCRFVAEGMSRLDEWSWRAIHGHGVKKPPQSETAQPQPERSVRRTLP
Ga0187774_100634842	3300018089	Tropical Peatland	MWLAGWAVRVLLLITAPIYYLCRFVARSMSSLDEWSWRAIHTRDLKKPPQSETGQEQPQRSVKRTHL
Ga0187770_100023662	3300018090	Tropical Peatland	MWLAGWAVRVLLLITAPIFYLCRAVAASMSRLDDWSWHAIHSGEMKKPPQSDTAQKHPQPSAKRILP
Ga0187770_100330086	3300018090	Tropical Peatland	MRLAGWAVRVLLLITAPIFYLCRFVAECMSSLDEWSWRAIHRHGVKKPPQSETAQKPEGSVKRTLP
Ga0187770_101132081	3300018090	Tropical Peatland	VWLAGWAVRVLLLITAPIYYLCRFVAQALSHLDTWSWTAIHAHERKKPPQSETLAQQPQRDAKKMLL
Ga0187770_101367321	3300018090	Tropical Peatland	MWLAGWAVRVLLLITAPIYYLCRFVAETMSGLDAWSWRAIHGHGLKKPPQSEMAQKQPQRSVKRTLP
Ga0187770_106246511	3300018090	Tropical Peatland	MIRSPSEATMRLAGWAVRVLLLITAPIFYLCRFVTAGMSRLDEWSWRAIHGHGVKKPPQSETAQPQPERSVRRTLP
Ga0187770_108741422	3300018090	Tropical Peatland	MWLAGWAVRVLLLITAPIFYLCRFTTDVMTKLDDWSWRAIHAEEMKKPPQPEIAQNERQQSAKRFLR
Ga0187770_109310602	3300018090	Tropical Peatland	MWMAGWAVRVLLLITTPLFYLCRAVAASMSRLDDWSWRAIHSGEMKKPPQSETVQKQPQQSAKKILP
Ga0187770_110256842	3300018090	Tropical Peatland	MWLAGWAVRVLLLITAPLFYLCRFTTDVMTKLDDWSWRAIHAGEMKKPPQPEIAQNERQPSAKRFLR
Ga0187770_117711882	3300018090	Tropical Peatland	CNSMMRSPAEATMWLAGWAVRVLLLITAPIFYLCRFTTDVMTRLDDWSWRAIHAGEMRKPPQPETAQREPQPSAKRFLR
Ga0187770_118116422	3300018090	Tropical Peatland	MRLAGWAVRVLLLITAPIFYLCRFVAEGMSRLDEWSWRAIHGHGVKKPPQSETAQQQRERSVKRTLP
Ga0187797_10229641	3300019284	Peatland	TMKLAGWAVRVLLLITAPVYYLCRFVVKGMSGLDEWSWRAIHAGDLKKPPQSETAEGQPQPSARRIL
Ga0208043_10314452	3300027570	Peatlands Soil	MWLAGWAVRVLLLITAPIFYLCRAVAGSISTLDDWSWRAIHSGEMRKPPQSETAQKQPQPSAKRILR
Ga0208324_10319572	3300027604	Peatlands Soil	MWLAGWAVRVLLLITAPIFYLCRAVAGSMSRLDDWSWRAIHSGEMRKPPQSETAQKQPQRSTKRILP
Ga0208044_10813652	3300027625	Peatlands Soil	MWLAGWAVRVLLLITAPIFYLCRAVAGSMSRLDDWSWRAIHSGEMRKPPQSETAQKQPQQSAKRILP
Ga0208827_10277443	3300027641	Peatlands Soil	MWLAGWAVRVLLLITAPIFYLCRAVAGSMSSLDDWSWRAIHAGEMRKPPQSETAQKQPQRSTKRILP
Ga0208565_11131892	3300027662	Peatlands Soil	MWLAGWAVRVLLLITAPIFYLCRAVAGSMSSLDDWSWRAIHAGEMRKPPQSETAQKQPQQSA
Ga0209446_11323701	3300027698	Bog Forest Soil	MWLAGWAVRVLLLITAPIFYLCRAVAGSMSSLDDWSWRAIHAGEMRKPPQSETAQKQPQPSAKRILP
Ga0209068_101553542	3300027894	Watersheds	MWLAGWAVRVVLLITAPIYYLCRFVAGLMSRLDEWSWSAIHAGELRKPPQSETAQKQPERAAKRTLL
Ga0209415_105119052	3300027905	Peatlands Soil	MWLAGWAVRALLLITAPIFYLCRAVAGSMSSLDDWSWRAIHSGEMKKPPQSETAQKQPQQSAKRILP
Ga0335079_100086981	3300032783	Soil	MWLAGWAVRVLLLITAPIFYLCRAVAGTMSRLDDWSWRAIHAGEPKKPPQPETAHQQPQPITKRISP
Ga0335079_100363642	3300032783	Soil	MRVAGWTVRVLLLITAPIFYLCRGVAAGMSRLDDWSWRAIHTGEMKKPPQPETAQQEPQSGARRLLS
Ga0335079_103578233	3300032783	Soil	MRLAGWAVRVVLLITAPVYYLCRFLASLFSSLDSWSWKAIHNHELKKPPQSETTQAAREQRSKSSLF
Ga0335079_104845791	3300032783	Soil	MKLAGWAVRVLLLIAAPVYYLSRFVAKGMSSLDEWSWRAIHAGYRKKPPQSETAEGQPQPSARRIL
Ga0335079_123110651	3300032783	Soil	VWLAGWAVRVLLLITAPIYYLCRFLADAMSRLDAWSWKAIHPRELKKPPQSEALPEQSPRSAKKGSLQ
Ga0335078_102035954	3300032805	Soil	VWLLGWAVRVLLLITAPIYYLSRFLARTMGRLDAWSWKAIHADELKKPAQPAMLTERTQRTAGKYADKWKVLSGRE
Ga0335078_114017842	3300032805	Soil	MRLAGWAVRVVLLITAPVYYLCRFLASLFSSLDSWSWKAIHNHELKKPPQSETTQAAREQRSK
Ga0335078_114282982	3300032805	Soil	MWLAGWAVRVLLLITAPIFYLCRFTTDVMTRLDEWSWRAIHSGEMKKPPQPETAHREAQPGARRFL
Ga0335078_116949392	3300032805	Soil	VWLAGWAVRVLLLITAPIYYLCRFLADAMSRLDAWSWKAIHPRELKKPPQSEALPEQSPRSAKKGSL
Ga0335070_101829052	3300032829	Soil	MWLAGWAVRVLLLITAPLYYLCRFVAEAMSGLDEWSWRAIHGTGFKKPPQSETAQPQPQPSAKRFLR
Ga0335081_100658918	3300032892	Soil	MWLAGWAVRVLLLITAPIYYLCRFVARSMSGLDEWSWRAIHARDLKKPPQSETAQEQQPQRSAKRTPR
Ga0335081_102424863	3300032892	Soil	MRLAGWAVRVVLLITAPIYYLCRFLASLFSSLDSWSWKAIHNHELKKPPQSETTQAAREQRSKSSLF
Ga0335081_115728651	3300032892	Soil	MWLAGWAVRVLLLITAPIFYLCRAVAGSMSSLDDWSWRAIHSGEMRKPPQSETAQKQPQRSAKRILS
Ga0335081_117150372	3300032892	Soil	VWLAGWAVRVLLLITAPIYYLCRRLSEAMSRLDAWSWRAIHAHDGRKPPQSETLPQQPQRDGKSVVSGKR
Ga0335069_107391513	3300032893	Soil	AGWAVRVLLLITAPLYYLCRFVAEAMSGLDEWSWRAIHGTGFKKPPRSETAQQQPQPRAKRSLR
Ga0335076_108988092	3300032955	Soil	MWLAGWAVRVLLLVGAPVYYLCRFTARGMSSLDEWSWRAIHARELKKPPQSETAQNQSQQNATRILP
Ga0335077_100968514	3300033158	Soil	MWLAGWAVRVLLLITAPIFYLCRAVAGTMSRLDDWSWRAIHAGEPKKPPQPETARQQPQPITKRISP
Ga0326726_114629742	3300033433	Peat Soil	MWLAGWAVRVVLLITAPIYYLCRFLAGLLSSLDEWSWSAIHAHERKKPPQPETAQEQPQQRSKRTFL
Ga0314867_079022_29_259	3300033808	Peatland	MIRSPSEATMWLAGWAVRVLLLITAPIFYLCRAVAGSMSSLDDWSWRAIHSGEMRKPPQSETAQKQPQRSAKRILS
Ga0314867_142801_389_559	3300033808	Peatland	LLITAPLYYLCRFVAEAMSGLDEWSWRAIHGTGLKKPPQSETAQKQPQRSVKRTLP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064777

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences