NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F064929

Metagenome / Metatranscriptome Family F064929

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F064929
Family Type Metagenome / Metatranscriptome
Number of Sequences 128
Average Sequence Length 45 residues
Representative Sequence RHVDSRRVTVYFDGDKVARLDKPTAAEAAAQDASAAKIKNGRTY
Number of Associated Samples 109
Number of Associated Scaffolds 128

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.56 %
% of genes near scaffold ends (potentially truncated) 97.66 %
% of genes from short scaffolds (< 2000 bps) 92.97 %
Associated GOLD sequencing projects 104
AlphaFold2 3D model prediction Yes
3D model pTM-score0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (76.562 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa
(17.188 % of family members)
Environment Ontology (ENVO) Unclassified
(22.656 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.656 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 23.61%    β-sheet: 0.00%    Coil/Unstructured: 76.39%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 128 Family Scaffolds
PF03658Ub-RnfH 62.50
PF03364Polyketide_cyc 15.62
PF01668SmpB 9.38
PF00563EAL 1.56
PF01381HTH_3 0.78
PF13728TraF 0.78
PF00005ABC_tran 0.78
PF10137TIR-like 0.78
PF14748P5CR_dimer 0.78
PF00185OTCace 0.78
PF00990GGDEF 0.78
PF13358DDE_3 0.78
PF07291MauE 0.78
PF02786CPSase_L_D2 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 128 Family Scaffolds
COG2914Putative antitoxin component PasI (RatB) of the RatAB toxin-antitoxin module, ubiquitin-RnfH superfamilyDefense mechanisms [V] 62.50
COG0691tmRNA-binding proteinPosttranslational modification, protein turnover, chaperones [O] 9.38
COG2200EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)Signal transduction mechanisms [T] 1.56
COG3434c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domainsSignal transduction mechanisms [T] 1.56
COG4943Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domainsSignal transduction mechanisms [T] 1.56
COG5001Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domainSignal transduction mechanisms [T] 1.56

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms76.56 %
UnclassifiedrootN/A23.44 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004080|Ga0062385_10233593All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1015Open in IMG/M
3300004092|Ga0062389_101284865All Organisms → cellular organisms → Bacteria → Proteobacteria917Open in IMG/M
3300004092|Ga0062389_102629103All Organisms → cellular organisms → Bacteria → Proteobacteria670Open in IMG/M
3300004152|Ga0062386_101487045All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria564Open in IMG/M
3300005602|Ga0070762_10472798All Organisms → cellular organisms → Bacteria → Proteobacteria818Open in IMG/M
3300005610|Ga0070763_10240745All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales977Open in IMG/M
3300005712|Ga0070764_10220430All Organisms → cellular organisms → Bacteria → Proteobacteria1070Open in IMG/M
3300005950|Ga0066787_10027592All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1009Open in IMG/M
3300005994|Ga0066789_10403997All Organisms → cellular organisms → Bacteria → Proteobacteria571Open in IMG/M
3300006052|Ga0075029_101259501Not Available518Open in IMG/M
3300006176|Ga0070765_100171755All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1950Open in IMG/M
3300006606|Ga0074062_12781313All Organisms → cellular organisms → Bacteria → Proteobacteria531Open in IMG/M
3300009088|Ga0099830_11803611All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio511Open in IMG/M
3300009500|Ga0116229_10228865All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1589Open in IMG/M
3300009500|Ga0116229_10441937All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1082Open in IMG/M
3300009510|Ga0116230_10480200All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria956Open in IMG/M
3300009634|Ga0116124_1157388All Organisms → cellular organisms → Bacteria → Proteobacteria635Open in IMG/M
3300009697|Ga0116231_10454306All Organisms → cellular organisms → Bacteria → Proteobacteria703Open in IMG/M
3300009709|Ga0116227_10559918All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria867Open in IMG/M
3300009764|Ga0116134_1017365All Organisms → cellular organisms → Bacteria → Proteobacteria2970Open in IMG/M
3300010869|Ga0126359_1393920All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300010880|Ga0126350_12308323Not Available538Open in IMG/M
3300012205|Ga0137362_10193696All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1748Open in IMG/M
3300012351|Ga0137386_10467412All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium909Open in IMG/M
3300012361|Ga0137360_10419222All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales1131Open in IMG/M
3300012362|Ga0137361_10121399All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2302Open in IMG/M
3300012923|Ga0137359_11707576All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria517Open in IMG/M
3300012925|Ga0137419_10224903All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1402Open in IMG/M
3300012927|Ga0137416_11257435Not Available668Open in IMG/M
3300012929|Ga0137404_10668595All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria938Open in IMG/M
3300012944|Ga0137410_10410149All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1093Open in IMG/M
3300014156|Ga0181518_10613734All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium506Open in IMG/M
3300014167|Ga0181528_10179685All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1143Open in IMG/M
3300014168|Ga0181534_10321343All Organisms → cellular organisms → Bacteria → Proteobacteria839Open in IMG/M
3300014169|Ga0181531_10390123All Organisms → cellular organisms → Bacteria → Proteobacteria856Open in IMG/M
3300014201|Ga0181537_10758549Not Available659Open in IMG/M
3300014201|Ga0181537_10789118All Organisms → cellular organisms → Bacteria → Proteobacteria644Open in IMG/M
3300014493|Ga0182016_10410051Not Available800Open in IMG/M
3300014838|Ga0182030_10593848All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1071Open in IMG/M
3300015078|Ga0167660_1033619Not Available557Open in IMG/M
3300015080|Ga0167639_1039744All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria617Open in IMG/M
3300015206|Ga0167644_1091714All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Chitinimonas → Chitinimonas arctica927Open in IMG/M
3300015264|Ga0137403_10398687All Organisms → cellular organisms → Bacteria → Proteobacteria1256Open in IMG/M
3300016357|Ga0182032_11096316All Organisms → cellular organisms → Bacteria → Proteobacteria683Open in IMG/M
3300017823|Ga0187818_10508995Not Available541Open in IMG/M
3300018038|Ga0187855_10402656All Organisms → cellular organisms → Bacteria → Proteobacteria797Open in IMG/M
3300018085|Ga0187772_11152248Not Available570Open in IMG/M
3300018090|Ga0187770_10869373All Organisms → cellular organisms → Bacteria → Proteobacteria723Open in IMG/M
3300020021|Ga0193726_1138590All Organisms → cellular organisms → Bacteria → Proteobacteria1069Open in IMG/M
3300020021|Ga0193726_1221526All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium784Open in IMG/M
3300020061|Ga0193716_1065906All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1642Open in IMG/M
3300020199|Ga0179592_10526579All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300020579|Ga0210407_10807721All Organisms → cellular organisms → Bacteria → Proteobacteria723Open in IMG/M
3300020579|Ga0210407_11275872Not Available550Open in IMG/M
3300020580|Ga0210403_11419140Not Available525Open in IMG/M
3300020583|Ga0210401_10410288All Organisms → cellular organisms → Bacteria → Proteobacteria1217Open in IMG/M
3300021168|Ga0210406_10024444All Organisms → cellular organisms → Bacteria → Proteobacteria5561Open in IMG/M
3300021170|Ga0210400_10268839All Organisms → cellular organisms → Bacteria → Proteobacteria1396Open in IMG/M
3300021178|Ga0210408_10818992All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria728Open in IMG/M
3300021363|Ga0193699_10108485All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1125Open in IMG/M
3300021401|Ga0210393_10681536All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria838Open in IMG/M
3300021401|Ga0210393_11390445All Organisms → cellular organisms → Bacteria → Proteobacteria561Open in IMG/M
3300021402|Ga0210385_11171288Not Available590Open in IMG/M
3300021407|Ga0210383_11594239All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio537Open in IMG/M
3300021420|Ga0210394_10366882All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1266Open in IMG/M
3300021420|Ga0210394_11551855All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium559Open in IMG/M
3300021479|Ga0210410_11414727Not Available588Open in IMG/M
3300021479|Ga0210410_11498280All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria568Open in IMG/M
3300021559|Ga0210409_10972675All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria723Open in IMG/M
3300023088|Ga0224555_1176809All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria600Open in IMG/M
3300024225|Ga0224572_1036135All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria936Open in IMG/M
3300025633|Ga0208480_1121971All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300027497|Ga0208199_1064748Not Available771Open in IMG/M
3300027669|Ga0208981_1119514All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300027729|Ga0209248_10051481Not Available1263Open in IMG/M
3300027860|Ga0209611_10353606All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria851Open in IMG/M
3300027908|Ga0209006_10195858All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1757Open in IMG/M
3300028138|Ga0247684_1039598All Organisms → cellular organisms → Bacteria → Proteobacteria756Open in IMG/M
3300028780|Ga0302225_10421515Not Available626Open in IMG/M
3300028783|Ga0302279_10409916Not Available564Open in IMG/M
3300028789|Ga0302232_10127111All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1294Open in IMG/M
3300028808|Ga0302228_10296204All Organisms → cellular organisms → Bacteria → Proteobacteria725Open in IMG/M
3300028813|Ga0302157_10083924All Organisms → cellular organisms → Bacteria → Proteobacteria2060Open in IMG/M
3300028877|Ga0302235_10415188All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium575Open in IMG/M
3300028906|Ga0308309_10157144Not Available1836Open in IMG/M
3300028909|Ga0302200_10204976All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium986Open in IMG/M
3300029907|Ga0311329_10469402All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria862Open in IMG/M
3300029907|Ga0311329_10785603Not Available609Open in IMG/M
3300029920|Ga0302142_1280072Not Available502Open in IMG/M
3300029922|Ga0311363_10016267All Organisms → cellular organisms → Bacteria → Proteobacteria13463Open in IMG/M
3300029939|Ga0311328_10053964All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3560Open in IMG/M
3300029943|Ga0311340_10276124All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1620Open in IMG/M
3300029943|Ga0311340_10721157All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria852Open in IMG/M
3300029944|Ga0311352_10161614All Organisms → cellular organisms → Bacteria → Proteobacteria1932Open in IMG/M
3300029999|Ga0311339_11965415All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria502Open in IMG/M
3300030054|Ga0302182_10138800All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1055Open in IMG/M
3300030399|Ga0311353_10095089All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2909Open in IMG/M
3300030399|Ga0311353_10316277All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1426Open in IMG/M
3300030503|Ga0311370_11661283All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria658Open in IMG/M
3300030518|Ga0302275_10288237All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales910Open in IMG/M
3300030617|Ga0311356_11948271Not Available520Open in IMG/M
3300030646|Ga0302316_10306957All Organisms → cellular organisms → Bacteria → Proteobacteria641Open in IMG/M
3300030739|Ga0302311_10152977All Organisms → cellular organisms → Bacteria → Proteobacteria1795Open in IMG/M
3300030739|Ga0302311_10523612All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales811Open in IMG/M
3300030739|Ga0302311_10916819Not Available560Open in IMG/M
3300030906|Ga0302314_10080630All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans4536Open in IMG/M
3300030997|Ga0073997_11947042Not Available643Open in IMG/M
3300031047|Ga0073995_10036998All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300031047|Ga0073995_12183388Not Available583Open in IMG/M
3300031234|Ga0302325_13261004Not Available516Open in IMG/M
3300031259|Ga0302187_10555861Not Available518Open in IMG/M
3300031525|Ga0302326_10471263All Organisms → cellular organisms → Bacteria → Proteobacteria1916Open in IMG/M
3300031525|Ga0302326_11129190All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium1086Open in IMG/M
3300031525|Ga0302326_13255788All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria547Open in IMG/M
3300031595|Ga0265313_10273346Not Available684Open in IMG/M
3300031708|Ga0310686_104897359Not Available933Open in IMG/M
3300031708|Ga0310686_111654994All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria967Open in IMG/M
3300031708|Ga0310686_116345970All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium968Open in IMG/M
3300031715|Ga0307476_10257094All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1276Open in IMG/M
3300031715|Ga0307476_10504577All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales896Open in IMG/M
3300031718|Ga0307474_10230509All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1415Open in IMG/M
3300031726|Ga0302321_102313004Not Available626Open in IMG/M
3300031788|Ga0302319_10016531All Organisms → cellular organisms → Bacteria → Proteobacteria13592Open in IMG/M
3300031823|Ga0307478_11584566All Organisms → cellular organisms → Bacteria → Proteobacteria541Open in IMG/M
3300031890|Ga0306925_10532455All Organisms → cellular organisms → Bacteria → Proteobacteria1248Open in IMG/M
3300033480|Ga0316620_10129521All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1980Open in IMG/M
3300033887|Ga0334790_235977Not Available511Open in IMG/M
3300034163|Ga0370515_0448244Not Available544Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa17.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil15.62%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.38%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog7.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.47%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog4.69%
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated4.69%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil3.91%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.91%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.12%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil2.34%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.56%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.56%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog1.56%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.56%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.56%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.56%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen1.56%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.56%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.78%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.78%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.78%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.78%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.78%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.78%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.78%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.78%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005950Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006606Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009500Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009510Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300009634Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150EnvironmentalOpen in IMG/M
3300009697Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009709Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009764Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40EnvironmentalOpen in IMG/M
3300010869Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014156Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaGEnvironmentalOpen in IMG/M
3300014167Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaGEnvironmentalOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300014493Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaGEnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015078Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11a, vegetated hydrological feature)EnvironmentalOpen in IMG/M
3300015080Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6C, Proglacial plain, adjacent to northern proglacial tributary)EnvironmentalOpen in IMG/M
3300015206Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300020021Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1EnvironmentalOpen in IMG/M
3300020061Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300023088Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34EnvironmentalOpen in IMG/M
3300024225Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5Host-AssociatedOpen in IMG/M
3300025633Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300027497Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027669Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027729Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027860Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)Host-AssociatedOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028138Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25EnvironmentalOpen in IMG/M
3300028780Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2EnvironmentalOpen in IMG/M
3300028783Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3EnvironmentalOpen in IMG/M
3300028789Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3EnvironmentalOpen in IMG/M
3300028808Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2EnvironmentalOpen in IMG/M
3300028813Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3EnvironmentalOpen in IMG/M
3300028877Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300028909Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1EnvironmentalOpen in IMG/M
3300029907I_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300029920Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_3EnvironmentalOpen in IMG/M
3300029922III_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300029939I_Bog_E3 coassemblyEnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300029944II_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030054Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1EnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030518Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2EnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030646Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2EnvironmentalOpen in IMG/M
3300030739Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3EnvironmentalOpen in IMG/M
3300030906Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3EnvironmentalOpen in IMG/M
3300030997Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031047Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031259Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031595Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaGHost-AssociatedOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M
3300033887Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1EnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062385_1023359313300004080Bog Forest SoilSRHVDSRRVTVYFDGDKVARLDIPTAAEAAAQDATAAKVKYGRIY*
Ga0062389_10128486533300004092Bog Forest SoilKIGRSRHVDSRRVTVYFDGDKVAKLDKPSAAEAASQDATAAKVKYGRIY*
Ga0062389_10262910323300004092Bog Forest SoilKKGRSRHVDSRRVTVYFDGEKVARLDKPTAAEAAAQDASAAQIKNGRTY*
Ga0062386_10148704523300004152Bog Forest SoilGRSNHVDSRRVTVYFDGEKVAKLDKPTGAEAAAQEKSLSQIKNGRTY*
Ga0070762_1047279813300005602SoilDYIYYLKIGRSRHVDSRRVTVYFEGDKVASLDKPSAAEAAKQDATAAKVKAGRIY*
Ga0070763_1024074533300005610SoilHVDSRRVTVYFDGDKVARLDKPSAAVAAQQDASAAKIKNGRTY*
Ga0070764_1022043013300005712SoilRRVTVYFEGDKVTKLDKPTDAEAAAQDASAAKIKNGRTY*
Ga0066787_1002759233300005950SoilLKKGRSRHVDSRRVTVYFDGDKVTKLDKPTDAEAAAQDASAAKIKNGRTY*
Ga0066789_1040399723300005994SoilYIYYLRKGRTRHIDSRRVTVYFDGEKVAKLDKPTAAEAAKQDKSAAQIKNGRTY*
Ga0075029_10125950113300006052WatershedsYYLRKGRTRHVDERRVTVYFEADKVVRLDKPSDALAAAQDANLATVKNGRVY*
Ga0070765_10017175543300006176SoilRHVDSRRVTVYFDGDKVAHLDKPSAAVAAQQDASAAKIKNGRTY*
Ga0074062_1278131333300006606SoilLKKGRSNHVDSRRVTVYFEGDKVAKLDKPSASEAAAQDASAAQIKNGRIY*
Ga0099830_1180361113300009088Vadose Zone SoilTVYFEGDKVARLDKPTAAEAAAQDASAAKLKNGRTY*
Ga0116229_1022886543300009500Host-AssociatedTRHVDSRRVTVYFADEKVAKMDKPTDAEAAQQEKSLSQIKNGRTY*
Ga0116229_1044193713300009500Host-AssociatedKGRSRHVDSRRVTVYFDGEKVARLDKPTDAEAAAQEKSLSELKKGRTY*
Ga0116230_1048020033300009510Host-AssociatedDSRRVTVYFDGDKVAKLDKPTDAEAAAQDASAAKIKNGKIY*
Ga0116124_115738823300009634PeatlandGDYIYYLKKGRTRHIDSRRVTVYFDGEKVARLDKPSDAVAAEQAASAARLKNGRTY*
Ga0116231_1045430633300009697Host-AssociatedRSRHVDSRRVTVYFDGDKVAKLDKPTDAEAAAQDASAAKLKNGRIY*
Ga0116227_1055991813300009709Host-AssociatedKGRSRHVDERRVTVYFDGEKVAKLDKPSDAEAAAQEKSLSQIKNGRTY*
Ga0116134_101736543300009764PeatlandYIYYLKKGRSNHVDSRRVTVYFDGEKVAKLDKPTGAEAAAQEKSLSQIKNGRTY*
Ga0126359_139392013300010869Boreal Forest SoilHVDSRRVTVYFEGDKVAKLDKPTAAEAAAQDASAAQIKNGRTY*
Ga0126350_1230832313300010880Boreal Forest SoilLRKGRTRHVDSRRVTVYFDCEKVAKLDKPTAEEAAAQDKSAAKIKNGRTY*
Ga0137362_1019369613300012205Vadose Zone SoilIYYLKKGRSRHVDSRRVTVYFDGDKVARLDKPTAAEAAAQDASAAKIKNGRTY*
Ga0137386_1046741213300012351Vadose Zone SoilTVYFDGDKVARLDKPTAAEAAAQDASAAQIKNGRTY*
Ga0137360_1041922213300012361Vadose Zone SoilDSRRVTVYFDGEKVAKLDKPTAAEAAAQDKSAAQIKNGRTY*
Ga0137361_1012139913300012362Vadose Zone SoilKKGRSRHVDSRRVTVYFDGDKVARLDKPTAAEAAAQDASAAKIKNGRTY*
Ga0137359_1170757623300012923Vadose Zone SoilRHVDSRRVTVYFDGDKVARLDKPTAAEAAAQDASAAKIKNGRTY*
Ga0137419_1022490343300012925Vadose Zone SoilLKKGRSRHVDSRRVTVYFDGDKVARLDKPTAAEAAAQDASAAKIKNGRIY*
Ga0137416_1125743513300012927Vadose Zone SoilSRHVDSRRVTVYFDGEKVARLDKPTAAEAAAQDASAAKIKNGRTY*
Ga0137404_1066859533300012929Vadose Zone SoilYIYYLKKGRSRHVDSRRVTVYFDGDKVARLDKPTAAEAAAQDASAAQIKNGRTY*
Ga0137410_1041014933300012944Vadose Zone SoilHVDSRRVTVYFDGEKVAKLDKPTAAEAAAQDKSAAQIKNGRTY*
Ga0181518_1061373413300014156BogIYYLKNGRSGHVDSRRVTVYFDGDKVARLDKPTPAEAAAQDASAAKIKNGRIY*
Ga0181528_1017968513300014167BogLKKGRTRHIDSRRVTVYFDGEKVARLDKPTDAVAAEQAASAAKIKNGRTY*
Ga0181534_1032134333300014168BogLKKGRTRHVDSRRVTVYFDGEKVARLDKPTDAVAAEQDASAAKIKNGRTY*
Ga0181531_1039012333300014169BogYFDGDKVARLDKPTDELAAQQDASAAKIKNGRTY*
Ga0181537_1075854933300014201BogYYLKKGRSRHVDSRRVTVFFDGEKVARLDKPSDAEAAAQEKSLSELKKGRTY*
Ga0181537_1078911833300014201BogDSRRVTVYFDGDKVARLDKPTDALAAEQDASAAKIKNGRTY*
Ga0182016_1041005123300014493BogLKKGRTRRVDSRRVTVYFDGEKVARLDKPSPEVAAEQEKSLSKIKNGRTY*
Ga0182030_1059384833300014838BogDSRRVTVYFDGEKVARLDKPTAAVAAEQAASAAKIKNGRTY*
Ga0167660_103361923300015078Glacier Forefield SoilVYFEGDKVARLDKPTAAEAAAQDASAAQIKNGRTY*
Ga0167639_103974413300015080Glacier Forefield SoilHVDSRRVTVYFDGDKVAKLDKPTAAEAAAQDASAAKIKNGRTY*
Ga0167644_109171413300015206Glacier Forefield SoilYFDGDKVAKLDKPTDAEAAAQDASAAKIKNGRIY*
Ga0137403_1039868743300015264Vadose Zone SoilYYLKKGRTRHVDSRRVTVYFDGDKVARLDKPTDAEAAAQDASAAKIKNGRVY*
Ga0182032_1109631633300016357SoilGRSRQVDSRRVTVYFEGDKVARLDKPTDEEAARQDASAAKLKTGRIY
Ga0187818_1050899523300017823Freshwater SedimentYYLKKGRTSHVDSRRVTVYFDGDKVARLDKPSAAVAAAQDASAAKIKNGRTY
Ga0187855_1040265613300018038PeatlandYIYYLKKGRSNHVDSRRVTVYFDDEKVAKLDKPTEAEAAAQEKSLSQIKNGRTY
Ga0187772_1115224813300018085Tropical PeatlandDYIYYLKKGRSRHIDSRRVTVYFEGEKVARLDKPTAEEAARQDASAAKIKTGRIY
Ga0187770_1086937333300018090Tropical PeatlandKKGRSRHVDSRRVTVYFDGDKVAKLDKPTDAEAAAQDASAAKIKSGRVY
Ga0193726_113859043300020021SoilYIYYLKKGRSRHVDSRRVTVYFDGDKVARLDKPTDAEAAAQDASAAKLKRGRVY
Ga0193726_122152633300020021SoilDSRRVTVYFDGEKVAKLDKPTAAEAAAQDKSAAQIKNGRTY
Ga0193716_106590643300020061SoilIYYLKKGRTRHVDSRRVTVYFDGDKVARLDKPTAAEAAAQDASAAKVKNGRVY
Ga0179592_1052657913300020199Vadose Zone SoilTVYFDGDKVAKLDKPTAAEAAAQDASAAQMKNGKIY
Ga0210407_1080772133300020579SoilRVTVYFDGEKVAKLDKPTAEEAAAQDKSAAQIKNGRTY
Ga0210407_1127587233300020579SoilRRVTVYFEGDKVAKLDKPTAAEAAAQDASAAQIKNGRTY
Ga0210403_1141914023300020580SoilIYYLRKGRTRHVDSRRVTVYFDGEKVAKLDKPTAEEAAAQDKSAAQIKNGRTY
Ga0210401_1041028843300020583SoilHIDSRRVTVYFEGEKVARLDKPSAAVAAAQDASAAKLKNGRTY
Ga0210406_1002444413300021168SoilRSRHVDSRRVTVYFDGDKVARLDKPTAAEAAAQDASAAKIKNGRTY
Ga0210400_1026883943300021170SoilYIYYLKKGRSRHVDSRRVTVYFDGDKVARLDKPTAAEAAAQDASAAKIKNGRIY
Ga0210408_1081899213300021178SoilSRHVDSRRVTVYFDGDKVARLDKPTAAEAAAQDASAAKIKNGRTY
Ga0193699_1010848513300021363SoilDSRRVTVYFDGDKVARLEKPTDAEAAAQDASAAKIKNGRVY
Ga0210393_1068153633300021401SoilSRHVDSRRVTVYFEGDKVAKLDKPTAAEAAAQDASAAQIKNGRTY
Ga0210393_1139044513300021401SoilSRRVTVYFDGDKVAKLDKPTAAEAAAQDASAAKIKNGRIY
Ga0210385_1117128833300021402SoilIYYLKKGRTRHIDSRRVTVYFDGEKVARLDKPSAAVAAAQDASAAKLKNGRTY
Ga0210383_1159423913300021407SoilIYYLKKGRSRHVDSRRVTVYFEGDKVAKLDKPTAAEAAAQDASAAQIKNGRTY
Ga0210394_1036688213300021420SoilRRVTVYFDGEKVARLDKPTAEEAARQDASAAKIKGGRTY
Ga0210394_1155185533300021420SoilLKKGRTRHVDSRRVTVYFDGDKVARLDKPTDAEAAKQDASAAKIKNGRIY
Ga0210410_1141472713300021479SoilRVTVYFDGEKVAKLDKPSAEQAAAQDKSAAQIKNGRTY
Ga0210410_1149828023300021479SoilRHVDSRRVTVYFDGEKVARLDKPTAEEAARQDASAAKIKNGRTY
Ga0210409_1097267533300021559SoilRVTVYFDGEKVARLDKPTAEEAARQDASAAKIKGGRTY
Ga0224555_117680923300023088SoilYIYYLKKGRSNHVDSRRVTVYFDGEKVAKLDKPTGAEAAAQEKSLSQIKNGRTY
Ga0224572_103613513300024225RhizosphereTVYFDGDKVTHLDKPSAAVAAQQDASAAKIKNGRTY
Ga0208480_112197113300025633Arctic Peat SoilLKKGRTRHVDSRRVTVYFDGDKVARLDKPTDAEAAAQDASAAKIKNGRIY
Ga0208199_106474813300027497Peatlands SoilTRHVDSRRVTVYFDGEKVARLDKPSDALAAEQAASAAKIKSGRTY
Ga0208981_111951423300027669Forest SoilVYFDGDKVAKLDKPTAAEAAAQDASAAKIKNGRTY
Ga0209248_1005148133300027729Bog Forest SoilRVTVYFDADKVARLDKPTAAEAAAQDASAAKVKYGRIY
Ga0209611_1035360613300027860Host-AssociatedDSRRVTVYFDGEKVARLDKPTDAEAAAQEKSLSELKKGRTY
Ga0209006_1019585813300027908Forest SoilVTVYFEGDKVAKLDKPTAAEAAAQDASAAQIKNGRTY
Ga0247684_103959813300028138SoilVYFEGDKVAKLDKPSASEAAAQDASAAQIKNGRIY
Ga0302225_1042151513300028780PalsaYIYYLKHGRSRKVDSRRVTVYFDGDKVARLDKPTDAEAAAQDAAAAKLKYGRIY
Ga0302279_1040991613300028783BogVTVYFDGEKVARLDKPSAAVAAEQDASAAKIKNGRTY
Ga0302232_1012711143300028789PalsaTVYFDGDKVERLEKPSDALAAEQDASAAKIKNGRTY
Ga0302228_1029620433300028808PalsaIYYLKKGRTRHVDSRRVTVYFDGDKVARLDKPTDALAAQQDASAAKIKNGRTY
Ga0302157_1008392443300028813BogVYFDGDKVARLDKPTAEEAAAQDASAAQIRNGRVY
Ga0302235_1041518813300028877PalsaTRHVDSRRVTVYFDGDKVARLDKPSDELAAQQDASAAKIKNGRTY
Ga0308309_1015714443300028906SoilVDSRRVTVYFDGDKVAHLDKPSAAVAAQQDASAAKIKNGRTY
Ga0302200_1020497613300028909BogRHAESRRVTVYFDGEKVAKLDKPSAAVAAQQEKSLSQIKNGRTY
Ga0311329_1046940233300029907BogRVTVYFDGEKVARLDKPTDAVAAAQAASAAEIKNGRTY
Ga0311329_1078560333300029907BogRHVDSRRVTVYFDGEKVARLDKPTDAEAAAQDASAKQIKNGRTY
Ga0302142_128007233300029920BogSRRVTVYFDGDKVAKLDKPTDAEAAAQAASAKQIKPGRSF
Ga0311363_10016267183300029922FenRVTVYFDGEKVAKLDKPSAAVAAQQEKSLSQIKNGRTY
Ga0311328_1005396473300029939BogHVDMRRVTVYFDGEKVARLDKPSDELAAAQAASAAQVKNGRTY
Ga0311340_1027612413300029943PalsaHVDSRRVTVYFDGDKVARLDKPSAAEAAAQDASAAQIKNGRTY
Ga0311340_1072115713300029943PalsaSRRVTVFFDGEKVARLDKPSDAEAAAQEKSLSELKKGRTY
Ga0311352_1016161443300029944PalsaRHVDSRRVTVYFDGDKVARLDKPSDELAAQQDASAAKIKNGRTY
Ga0311339_1196541523300029999PalsaVTVYFDGDKVARLDKPTDALAAQQDASAAKIKNGRTY
Ga0302182_1013880033300030054PalsaYIYYLRKGRTRHIDSRRVTVYFDGEKVARLDKPTAAQAAAQDASAAQIKNGRTY
Ga0311353_1009508963300030399PalsaRVTVYFDGEKVARLDKPTAAQAAAQDASAAQIKNGRTY
Ga0311353_1031627713300030399PalsaGRTRHVDSRRVTVYFDGDKVARLDKPSDELAAQQDASAAKIKNGRTY
Ga0311370_1166128313300030503PalsaVDSRRVTVYFDGDKVANLDKPTDAEAAAQDASAAKIKNGKIY
Ga0302275_1028823713300030518BogLKKGRSRHVDSRRVTVYFDGDKVAKLDKPTDAEAAAQDASAAQIKNGRTY
Ga0311356_1194827113300030617PalsaSRKVDSRRVTVYFDGDKVARLDKPTDAEAAAQDAAAAKLKYGRIY
Ga0302316_1030695713300030646PalsaLKKGRTRHVDSRRVTVYFDGEKVARLDKPTDEEAAKQDASAKQIKNGRTY
Ga0302311_1015297713300030739PalsaDSRRVTVYFDGDKVARLDKPSDELAAKQDASAAKIKNGRTY
Ga0302311_1052361233300030739PalsaKGRSRHVDSRRVTVYFDGDKVARLDKPTDAEAAAQDASAAQIKNGRTY
Ga0302311_1091681923300030739PalsaVDSRRVTVFFDGEKVARLDKPSDAEAAAQEKSLSELKKGRTY
Ga0302314_1008063013300030906PalsaYLKKGRSRHVDSRRVTVYFDGDKVARLDKPSAAEAAAQDASAAQIKNGRTY
Ga0073997_1194704233300030997SoilVYFDGEKVAKLDKPTAEEAAAQDKSAAQIKNGRTY
Ga0073995_1003699823300031047SoilSRHVDSRRVTVYFDGDKVARLDKPTAAEAAAQDASAAKLKNGRTY
Ga0073995_1218338823300031047SoilRHVDSRRVTVYFDGEKVAKLDKPTAEEAAAQDKSAAQIKNGRTY
Ga0302325_1326100423300031234PalsaHVDSRRVTVYFDGDKVARLDKPSAAVAAQQDASAAKIKNGRTY
Ga0302187_1055586113300031259BogDSRRVTVYFDGDKVAKLDKPTDAEAAAQAASAKQIKPGRSF
Ga0302326_1047126343300031525PalsaSRRVTVYFDGDKVARLDKPSDELAAKQDASAAKIKNGRTY
Ga0302326_1112919043300031525PalsaRVTVYFDGDKVARLDKPTDELAAQQDASAAKIKNGRTY
Ga0302326_1325578813300031525PalsaYLKKGRSRHVDSRRVTVYFDGDKVEHLDKPTDAVAAEQDASAAKIKNGRTY
Ga0265313_1027334623300031595RhizosphereDYIYYLKKGRTRHIDSRRVTVYFDGDKVAKLDKPTDAEAAAQERSAAEIKNGRIY
Ga0310686_10489735923300031708SoilYIYYLKKGRSRHVDSRRVTVYFDGEKVAKLDKPTDEEAAKQDASAKQIKNGRTY
Ga0310686_11165499433300031708SoilYLKKGRSSHVDSRRVTVYFDGDKVAKLDKPTAAEAAAQDASAAKIKNGRIY
Ga0310686_11634597033300031708SoilYYLKKGRSRHVDSRRVTVYFDGDKVAKLDKPTDAEAAAQDASAAQIKNGRTY
Ga0307476_1025709443300031715Hardwood Forest SoilLKKGRTRHVDSRRVTVYFDGDKVARLDKPTDAEAAKQDASAAKIKNGRVY
Ga0307476_1050457733300031715Hardwood Forest SoilYIYYLKKGRNRHVDSRRVTVYFDGDKVAKLDKPTAAEAAAQDASAAQIKNGRTY
Ga0307474_1023050913300031718Hardwood Forest SoilLKKGRSRHVDSRRVTVYFEEDKVARLDKPTAAEAAAQDASAAKIKNGRTY
Ga0302321_10231300413300031726FenDYIYYLKKGRSRHVDSRRVTVYFDGDKVARLDKPTAAEAAAQDASAAKIKNGRTY
Ga0302319_1001653113300031788BogRRVTVYFDGEKVAKLDKPSAAVAAQQEKSLSQIKNGRTY
Ga0307478_1158456623300031823Hardwood Forest SoilNRHVDSRRVTVYFDGDKVAKLDKPTAAEAAAQDASAAQIKNGRTY
Ga0306925_1053245533300031890SoilYYLKKGRSRHVDSRRVTVYFEGDKVARLDKPTDEEAARQDASAAKLKTGRIY
Ga0316620_1012952143300033480SoilGHSRHVDTRRVTVFFDGDKVTKIDKPSDALAAAQEKNLAKMKNGRTY
Ga0334790_235977_11_1393300033887SoilLDTRRVTVYFEGDKVAKLDKPSDAVAAKQEASAAEIKNGRTY
Ga0370515_0448244_1_1593300034163Untreated Peat SoilYYLKKGRTRHVDSRRVTVYFDGDKVARLDKPTDAEAAKQDASAAKIKNGRVY

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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