NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F064970

Metagenome / Metatranscriptome Family F064970

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F064970
Family Type Metagenome / Metatranscriptome
Number of Sequences 128
Average Sequence Length 59 residues
Representative Sequence GILFFLQGFGLGGVIASFGLVLDLIGFVLFLIFVLVSSVILLTRENALPDTAGGIQ
Number of Associated Samples 108
Number of Associated Scaffolds 128

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 9.60 %
% of genes near scaffold ends (potentially truncated) 82.81 %
% of genes from short scaffolds (< 2000 bps) 82.03 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (80.469 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa
(15.625 % of family members)
Environment Ontology (ENVO) Unclassified
(26.562 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.469 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 54.76%    β-sheet: 0.00%    Coil/Unstructured: 45.24%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 128 Family Scaffolds
PF05239PRC 3.12
PF03793PASTA 3.12
PF00196GerE 1.56
PF08818DUF1801 1.56
PF02371Transposase_20 1.56
PF13454NAD_binding_9 1.56
PF01370Epimerase 1.56
PF13191AAA_16 0.78
PF00201UDPGT 0.78
PF03795YCII 0.78
PF00365PFK 0.78
PF00440TetR_N 0.78
PF13602ADH_zinc_N_2 0.78
PF09900DUF2127 0.78
PF14333DUF4389 0.78
PF00589Phage_integrase 0.78
PF00005ABC_tran 0.78
PF00144Beta-lactamase 0.78
PF13551HTH_29 0.78
PF00313CSD 0.78
PF13460NAD_binding_10 0.78
PF00296Bac_luciferase 0.78
PF04909Amidohydro_2 0.78
PF04828GFA 0.78
PF03704BTAD 0.78
PF13450NAD_binding_8 0.78
PF01872RibD_C 0.78
PF00753Lactamase_B 0.78
PF08044DUF1707 0.78
PF07883Cupin_2 0.78
PF08386Abhydrolase_4 0.78
PF07730HisKA_3 0.78
PF07690MFS_1 0.78
PF03988DUF347 0.78
PF07366SnoaL 0.78
PF13924Lipocalin_5 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 128 Family Scaffolds
COG1819UDP:flavonoid glycosyltransferase YjiC, YdhE familyCarbohydrate transport and metabolism [G] 1.56
COG3547TransposaseMobilome: prophages, transposons [X] 1.56
COG4430Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 familyFunction unknown [S] 1.56
COG5646Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)Posttranslational modification, protein turnover, chaperones [O] 1.56
COG5649Uncharacterized conserved protein, DUF1801 domainFunction unknown [S] 1.56
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.78
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.78
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 0.78
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.78
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.78
COG2367Beta-lactamase class ADefense mechanisms [V] 0.78
COG3629DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domainTranscription [K] 0.78
COG3791Uncharacterized conserved proteinFunction unknown [S] 0.78
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 0.78
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 0.78
COG3947Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domainsTranscription [K] 0.78
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.78
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 0.78
COG4705Uncharacterized membrane-anchored proteinFunction unknown [S] 0.78
COG02056-phosphofructokinaseCarbohydrate transport and metabolism [G] 0.78
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 0.78


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms80.47 %
UnclassifiedrootN/A19.53 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004080|Ga0062385_10090736All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Paraconexibacteraceae → Paraconexibacter → Paraconexibacter antarcticus1452Open in IMG/M
3300004635|Ga0062388_101974498All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium603Open in IMG/M
3300005574|Ga0066694_10391037All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300005985|Ga0081539_10122777All Organisms → cellular organisms → Bacteria1287Open in IMG/M
3300005994|Ga0066789_10037116All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales2156Open in IMG/M
3300005995|Ga0066790_10373041All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium609Open in IMG/M
3300006031|Ga0066651_10422560All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300006052|Ga0075029_101230805Not Available524Open in IMG/M
3300006086|Ga0075019_11040777All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Salsuginibacillus → Salsuginibacillus kocurii529Open in IMG/M
3300006162|Ga0075030_101561885Not Available516Open in IMG/M
3300006175|Ga0070712_101066926Not Available700Open in IMG/M
3300006642|Ga0075521_10560859All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium561Open in IMG/M
3300009090|Ga0099827_11751215All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300009137|Ga0066709_100307642All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei2156Open in IMG/M
3300009137|Ga0066709_102803065All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia647Open in IMG/M
3300009520|Ga0116214_1031253All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1918Open in IMG/M
3300009523|Ga0116221_1223740Not Available814Open in IMG/M
3300009524|Ga0116225_1463758All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium563Open in IMG/M
3300009623|Ga0116133_1146906All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium617Open in IMG/M
3300009672|Ga0116215_1033862All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2348Open in IMG/M
3300009683|Ga0116224_10657146All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium502Open in IMG/M
3300009700|Ga0116217_10615351Not Available676Open in IMG/M
3300009764|Ga0116134_1036027All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1940Open in IMG/M
3300010341|Ga0074045_10424379Not Available860Open in IMG/M
3300010379|Ga0136449_100430187All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2326Open in IMG/M
3300010379|Ga0136449_100934232All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1408Open in IMG/M
3300010379|Ga0136449_101765494Not Available928Open in IMG/M
3300010379|Ga0136449_102689007Not Available707Open in IMG/M
3300010379|Ga0136449_102966686All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium664Open in IMG/M
3300010379|Ga0136449_103335347All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria616Open in IMG/M
3300010880|Ga0126350_11694685All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium596Open in IMG/M
3300012199|Ga0137383_11145265All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium561Open in IMG/M
3300012210|Ga0137378_11394124All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia614Open in IMG/M
3300012350|Ga0137372_10108743All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2313Open in IMG/M
3300014162|Ga0181538_10002759All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria17821Open in IMG/M
3300014165|Ga0181523_10790049All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300014490|Ga0182010_10912670Not Available501Open in IMG/M
3300014493|Ga0182016_10860749All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium501Open in IMG/M
3300014501|Ga0182024_12574621All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium547Open in IMG/M
3300014838|Ga0182030_10478229Not Available1255Open in IMG/M
3300014838|Ga0182030_11067107Not Available703Open in IMG/M
3300015373|Ga0132257_100223400All Organisms → cellular organisms → Bacteria → Terrabacteria group2240Open in IMG/M
3300016404|Ga0182037_10491975All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1027Open in IMG/M
3300017942|Ga0187808_10544345All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium540Open in IMG/M
3300017946|Ga0187879_10011564All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5615Open in IMG/M
3300017946|Ga0187879_10098147All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1681Open in IMG/M
3300017955|Ga0187817_10566692All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria724Open in IMG/M
3300017959|Ga0187779_10214633Not Available1207Open in IMG/M
3300017959|Ga0187779_10347622All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium957Open in IMG/M
3300017966|Ga0187776_10807248Not Available674Open in IMG/M
3300017994|Ga0187822_10271548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium589Open in IMG/M
3300018013|Ga0187873_1218114All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia710Open in IMG/M
3300018014|Ga0187860_1245782All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300018037|Ga0187883_10052436All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2159Open in IMG/M
3300018044|Ga0187890_10359678All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium816Open in IMG/M
3300018046|Ga0187851_10176912All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora1279Open in IMG/M
3300018047|Ga0187859_10799452All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium541Open in IMG/M
3300018058|Ga0187766_10014231All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4542Open in IMG/M
3300018058|Ga0187766_10992264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium597Open in IMG/M
3300019786|Ga0182025_1027064All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1302Open in IMG/M
3300019787|Ga0182031_1400875All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2093Open in IMG/M
3300020579|Ga0210407_11167596All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium581Open in IMG/M
3300020582|Ga0210395_10373392All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1073Open in IMG/M
3300021181|Ga0210388_11476728Not Available568Open in IMG/M
3300021358|Ga0213873_10239042All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria573Open in IMG/M
3300021401|Ga0210393_10437696All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1067Open in IMG/M
3300021401|Ga0210393_11113794All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium637Open in IMG/M
3300021402|Ga0210385_10170323All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1569Open in IMG/M
3300021405|Ga0210387_10757403Not Available859Open in IMG/M
3300025464|Ga0208076_1050597All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium723Open in IMG/M
3300025509|Ga0208848_1042656All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia976Open in IMG/M
3300025576|Ga0208820_1074156Not Available885Open in IMG/M
3300025604|Ga0207930_1057553All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium → unclassified Cryobacterium → Cryobacterium sp. TMT3-29-2955Open in IMG/M
3300026291|Ga0209890_10042033All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1713Open in IMG/M
3300027641|Ga0208827_1019879All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2489Open in IMG/M
3300027662|Ga0208565_1083111All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae980Open in IMG/M
3300027696|Ga0208696_1213109All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300027775|Ga0209177_10010572All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2055Open in IMG/M
3300027825|Ga0209039_10010074All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales5580Open in IMG/M
3300027895|Ga0209624_10148248All Organisms → cellular organisms → Bacteria1550Open in IMG/M
3300027898|Ga0209067_10713959All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium581Open in IMG/M
3300027911|Ga0209698_10585646All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria858Open in IMG/M
3300028762|Ga0302202_10378610Not Available662Open in IMG/M
3300028765|Ga0302198_10268887Not Available813Open in IMG/M
3300028773|Ga0302234_10260902All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium745Open in IMG/M
3300028775|Ga0302231_10367315All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae605Open in IMG/M
3300028781|Ga0302223_10114724All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium891Open in IMG/M
3300028789|Ga0302232_10200487All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria995Open in IMG/M
3300028795|Ga0302227_10036478All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2400Open in IMG/M
3300028808|Ga0302228_10511444Not Available529Open in IMG/M
3300029915|Ga0311358_11038578All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium560Open in IMG/M
3300029917|Ga0311326_10377808All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium706Open in IMG/M
3300029952|Ga0311346_10352071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1467Open in IMG/M
3300029999|Ga0311339_10842354Not Available878Open in IMG/M
3300030007|Ga0311338_10084328All Organisms → cellular organisms → Bacteria4025Open in IMG/M
3300030007|Ga0311338_10865830All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium892Open in IMG/M
3300030013|Ga0302178_10059307All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2072Open in IMG/M
3300030519|Ga0302193_10066410All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2297Open in IMG/M
3300030520|Ga0311372_10403492All Organisms → cellular organisms → Bacteria → Terrabacteria group2070Open in IMG/M
3300030520|Ga0311372_11769359All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300030617|Ga0311356_10414237All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1328Open in IMG/M
3300030906|Ga0302314_10387077All Organisms → cellular organisms → Bacteria → Terrabacteria group1559Open in IMG/M
3300031232|Ga0302323_101145804All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia868Open in IMG/M
3300031234|Ga0302325_12316038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium648Open in IMG/M
3300031236|Ga0302324_100308148All Organisms → cellular organisms → Bacteria2423Open in IMG/M
3300031236|Ga0302324_100998447All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1138Open in IMG/M
3300031236|Ga0302324_101840849All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium767Open in IMG/M
3300031525|Ga0302326_11119564All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1092Open in IMG/M
3300031525|Ga0302326_12424173All Organisms → cellular organisms → Bacteria → Terrabacteria group661Open in IMG/M
3300031708|Ga0310686_106486954All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium608Open in IMG/M
3300031708|Ga0310686_107706370All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1188Open in IMG/M
3300031713|Ga0318496_10453307All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii709Open in IMG/M
3300031726|Ga0302321_102418260All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium613Open in IMG/M
3300031894|Ga0318522_10209161All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii739Open in IMG/M
3300032059|Ga0318533_10507218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii884Open in IMG/M
3300032060|Ga0318505_10629903All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii504Open in IMG/M
3300032160|Ga0311301_10431797Not Available1996Open in IMG/M
3300032160|Ga0311301_11831234All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium720Open in IMG/M
3300032160|Ga0311301_11886138Not Available705Open in IMG/M
3300032805|Ga0335078_10942846All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1030Open in IMG/M
3300032805|Ga0335078_12372466All Organisms → cellular organisms → Bacteria → Terrabacteria group552Open in IMG/M
3300032895|Ga0335074_11420843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium560Open in IMG/M
3300032898|Ga0335072_11550824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium562Open in IMG/M
3300033818|Ga0334804_165380All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium542Open in IMG/M
3300033828|Ga0334850_063475All Organisms → cellular organisms → Bacteria698Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa15.62%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil14.06%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.38%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland7.03%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog4.69%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.91%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.91%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.12%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil3.12%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.12%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog3.12%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.34%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland2.34%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.34%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil2.34%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.56%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.56%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.56%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost1.56%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.56%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen1.56%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.78%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.78%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.78%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.78%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.78%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.78%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.78%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.78%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300005995Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006642Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-DEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009523Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaGEnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009623Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10EnvironmentalOpen in IMG/M
3300009672Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaGEnvironmentalOpen in IMG/M
3300009683Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009764Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40EnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300014162Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014490Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaGEnvironmentalOpen in IMG/M
3300014493Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300018013Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100EnvironmentalOpen in IMG/M
3300018014Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40EnvironmentalOpen in IMG/M
3300018033Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018044Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300019786Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300019787Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021358Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3Host-AssociatedOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300025464Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025509Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025576Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025604Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300026291Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)EnvironmentalOpen in IMG/M
3300027641Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027662Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027696Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027825Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028762Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3EnvironmentalOpen in IMG/M
3300028765Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2EnvironmentalOpen in IMG/M
3300028773Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2EnvironmentalOpen in IMG/M
3300028775Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2EnvironmentalOpen in IMG/M
3300028781Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3EnvironmentalOpen in IMG/M
3300028789Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3EnvironmentalOpen in IMG/M
3300028795Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1EnvironmentalOpen in IMG/M
3300028808Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2EnvironmentalOpen in IMG/M
3300029915III_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029917I_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029952II_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030013Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3EnvironmentalOpen in IMG/M
3300030519Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3EnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030906Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3EnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031894Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033818Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-MEnvironmentalOpen in IMG/M
3300033828Peat soil microbial communities from Stordalen Mire, Sweden - 715 P1 1-5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062385_1009073613300004080Bog Forest SoilSIGAGTMLFLQGFGLGGVIASFGLVLDLIGFVLLLIFVLVSSVTLLRRESAAPGGTGAIH
Ga0062388_10197449813300004635Bog Forest SoilQGFGLGGVIASFGLVLDLIGFVLFLIFVLVSSVILLTRENALPDTAGGIK*
Ga0066694_1039103723300005574SoilVSVLAGVLLFLQGFGLGGVIATFGLVLDLLGFVLLLVFLAVSSVILLRRDDASANTVVQTD*
Ga0081539_1012277713300005985Tabebuia Heterophylla RhizosphereESGVSPRWLGWLSLVAGVLLFLQGFGLGGVIGTFGLVLDLIGFLLFLIFVLASSVTLLRRTVELPR*
Ga0066789_1003711633300005994SoilLFFLQGFGLGGVIATFGLGLDGKGFVLFLIFVLVSSVTFLRRESAVPSTSGGI*
Ga0066790_1037304113300005995SoilIGSGVLPRWLGWVSILAGILFFLQGFGLGGVIASFGLVLDLIAFVLFLIFVLVSSVILLTRQNAVPDTAGAIE*
Ga0066651_1042256013300006031SoilLPRWLGWVSVLAGVLLFLQGFGLGGVIATFGLVLDLLGFVLLLVFVAVSSVILLRRDDASANTVVQTD*
Ga0075029_10123080513300006052WatershedsLQAFGLGGVIASFGLVLDLIGFVLLLLFVLVSSVILLRRESAAR*
Ga0075019_1104077713300006086WatershedsGWVSILAGILFFLQGFGLGGVIASFGLVLDLIAFVLFLIFVLVSSVILLTRQNAVPDTAGAIE*
Ga0075030_10156188523300006162WatershedsRSGVLPRWLGWVATVVAPLLFLQGFGLGGVIATFGLILDLIGFLLLLVFILASSAILLRRDGAAGS*
Ga0070712_10106692623300006175Corn, Switchgrass And Miscanthus RhizosphereMFFPQGFGLGGGIAPFGLVLDLIAFVLFLIFVLASSVILLRRGDGVGNEQVARTG*
Ga0075521_1056085923300006642Arctic Peat SoilIAVGPLFFLQGFGLGGVIATFGLILDLIGFLLFLIFVLVSSFILLKRGNAVPETAGR*
Ga0099827_1175121513300009090Vadose Zone SoilMNGGRLSGGNELLVGVLFFLQGFGPGGVIHLFGLLLDLIGFVLFLISVLVSSVIFLRRENAVPATAG*
Ga0066709_10030764213300009137Grasslands SoilVSVLAGVLLFLQGFGLGGVIATFGLVLDLLGFVLLLVFVAVSSVILLTRDDASGNTVVQTD*
Ga0066709_10280306523300009137Grasslands SoilWISILAGVLFFLQGFGLGGVIATFGLVLDLIAFVPFLIFVLVSSVILLTRTHPIPDPVGVATT*
Ga0116214_103125343300009520Peatlands SoilVSILAGIMLFLQGFGLGGVIASFGLVLDLIGFVLFLIFVLVSSVIMLTRANAVPNTAVTIK*
Ga0116221_122374023300009523Peatlands SoilFLQGFGLGGVIASFGLVLDLIGFLLLLVFVLVSSVILVMRESAAPDTAGAIG*
Ga0116225_146375813300009524Peatlands SoilWVSILAGILFFLQGFGLGGVIASFGLVLDLIAFVLFLIFVLVSSVILLTRQNAVPDTAGAIE*
Ga0116133_114690613300009623PeatlandSILVGILFFLQGFGLGGVIASFGLVLDLIGFVLFLIFVLVSSVILLTRDKTFPGTAAGIE
Ga0116215_103386233300009672Peatlands SoilGILFFLQGFGLGGVIASFGLVLDLIGFVLFLIFVLVSSVILLTRENALPDTAGGIQ*
Ga0116224_1065714623300009683Peatlands SoilSGVVPRWLGWVSILAGSMLFLQGFGLGGVIASFGLVLDLIGFLLLLVVVLVSSIILLARED*
Ga0116217_1061535113300009700Peatlands SoilLGGVIASFGLVLDLIGFLLLLVFVLVSSVILVMRESAAPDTAGAIG*
Ga0116134_103602713300009764PeatlandQGFGLGGVIASFGLVLDLIAFVLFLIFVLVSSVILLTRQNALPGTAGGIE*
Ga0074046_1006775133300010339Bog Forest SoilGGVIASFGLVLDLIGFVLLLVVVLVSSIILLAREDSIPVSEQA*
Ga0074045_1042437913300010341Bog Forest SoilGLGGVIATFGLVLDGIGFVLLLVFVLVSSVLMLRRESAVASTPGGD*
Ga0136449_10043018733300010379Peatlands SoilRWLGWVSILVGILFFLQGFGLGGVIASFGLVLDLVGFVLFLIFVLVSSVILLARENALPDTAGGIK*
Ga0136449_10093423223300010379Peatlands SoilGVLPRWLGWVSILAGSMLFLQGFGLGGVIASFGLVLDLIGFLLLLVFVLVSSVILLRRENSISGTAQ*
Ga0136449_10176549423300010379Peatlands SoilFGLGGVIASFGLVLDLIAFVLFLIFVLVSSVILLTRQNAVPDTAGAIE*
Ga0136449_10268900713300010379Peatlands SoilFGLGGVIASFGLVLDLIGFVLFLIFVLVSSVILLTRENALPDTAGGIE*
Ga0136449_10296668623300010379Peatlands SoilGWVSILAGILFFLQGFGLGGVIASFGLVLDLIAFVLFLIFVLVSSVILLRRQNAVPDTAGAIE*
Ga0136449_10333534713300010379Peatlands SoilFGLGGVIASFGLVLDLIGFVLLLFFVVASCVILLRRESAVRYTGG*
Ga0126350_1169468513300010880Boreal Forest SoilLFFLQGFGLGGVIATFGLVLDGIGFVLLLIFVLVSSVLLLRRESAVPSISGGVD*
Ga0137383_1114526523300012199Vadose Zone SoilMFLLQGFGLGGVIATFGLILDLIGFVLLLTFVLVSSIILLTRQSRSPTPRG*
Ga0137378_1139412413300012210Vadose Zone SoilFGLGGVIATFGLILDLIGFVLLLTFVLVSSIILLTRQSRSPTPRG*
Ga0137372_1010874323300012350Vadose Zone SoilMFLLQGFGLGGVIATFGLVLDLIGFVLFLIFVVVSSLILLTRQTRSPTPRVESS*
Ga0181538_1000275913300014162BogLFFLQGFGLGGVTASFGLVLDLIGFVLFLIFVLVSSVILLTRKNALPHTAGGTE*
Ga0181523_1079004913300014165BogLGGVIASFGLVLDLIGFLLLLVFVLVSSVILVMRESAAPNTAGAIS*
Ga0182010_1091267013300014490FenILLFLQSFGLGGVIASFGLVLDLIGFLLLLIFILVSSVIMLTRENAHPFTAGTTEKMTRSSSL*
Ga0182016_1086074913300014493BogRWLGWVSILAGILFFLQAFGLGGVIASFGLVLDLIAFVLFLIFVLVSSVILLTRQNAVPDTVGAIE*
Ga0182024_1257462123300014501PermafrostAAPLLFLQAFGLGGVIASFGLVLDLIGFVLLLLFVLVSSVILLRRENAVRNTAARIG*
Ga0182030_1047822933300014838BogVSILAGSMLFLQGFGLGGVIASFGLVLDLIGFLLLLVFVLVSSVILAMRKSAAPDTAGAIT*
Ga0182030_1106710713300014838BogLPRWLGWVSIIAAPLLFLQAFGLGGLIASFGLVLDLIGFVLLLVFVLISSVVSLRSERSVGAAAQVG*
Ga0132257_10022340033300015373Arabidopsis RhizosphereLILAGIVFFLQGFGLGGVIASFGLVLDLIGFALFLIFVLVSSVILLTRERRTPLIAGGIELDNLVQASSATR*
Ga0182037_1049197523300016404SoilFGLGGVIATFGLVLDLIGFVLFLTFVLVSSVILLKRENRGPLAAGGG
Ga0187808_1054434513300017942Freshwater SedimentMLVGILFFLQGFGLGGVIASFGLVLDLIGFVLFLIFVLVSSAILLTRENALPGTAGGID
Ga0187879_1001156413300017946PeatlandLGGVIASFGLVLDLIGFVLFLIFVLVSSVILLTRENALPDTAGGIQ
Ga0187879_1009814723300017946PeatlandFFLQGFGLGGVIASFGLVLDLIGFVLFLIFVLVSSVILLTRDKTFPGTAAGIE
Ga0187817_1056669213300017955Freshwater SedimentGALPRWLGWFAIVAGVLFFLQGFRLGGVIASFGLVLDLIAFALFLVFIVVSSVILLRRQPALASTAG
Ga0187779_1021463323300017959Tropical PeatlandFLLQGFGLGGVIGSFGLVLDLIGFVLFLIFVLVSSVILLTRKTALPHTAGGTE
Ga0187779_1034762243300017959Tropical PeatlandGVLPRWLGWVAIVASPFLFLQGFGLGGVIGAFGLVLDLIGFLLVLIFVLVSSIIFLSREHSAADTAPRTA
Ga0187776_1080724823300017966Tropical PeatlandASPFLFLQGFGLGGVIGTFGLVFDLIGFLLVLIFVLVSSIIFLSREHSAADTAPRTA
Ga0187822_1027154813300017994Freshwater SedimentSGVLPRWLGWASILAGILFFLQGFGLGGVIASFGLVLDLIGFVLFLIFVLVSSVILLTRENALPDTAGGIK
Ga0187873_121811423300018013PeatlandFLQGFGLGGVIASFGLVLDLIASVLFLIFVLMSSVILLTRQNALPGAAGGIE
Ga0187860_124578223300018014PeatlandFGLGGVIASFGLVLDLIGFLLLLIFILVSSVIMLTRENAHPFTAGTTEKMTRSSSF
Ga0187867_1006086533300018033PeatlandGVIASFGLVLDLIGFVLFLIFVLVSSVILLTRDKTFPGTAAGIE
Ga0187883_1005243653300018037PeatlandGLGGVTASFGLVLDLIGFVLFLIFVLVSSVILLTRKNALPHTAGGTE
Ga0187890_1035967813300018044PeatlandAGILFFLQGFGLGGVIASFGLVLDLIASVLFLIFVLMSSVILLTRQNALPGTAGGIE
Ga0187851_1017691223300018046PeatlandGILFFLQGFGLGGVIASFGLVLDLIGFVLFLIFVLVSSVILLTRENALPDTAGGIQ
Ga0187859_1079945223300018047PeatlandAGILFFLQGFGLGGVIASFGLVLDLIAFVLFLIFVLVSSVILLTRQNALPGTAGGIE
Ga0187766_1001423163300018058Tropical PeatlandAGILFFLQGFGLGGVIASFGLVLDLIGFVLFLIFVLVSSIILLTRKNALPDTAGGIE
Ga0187766_1099226413300018058Tropical PeatlandVIRSGVLPRWLGWVSILAGIMLFLQGFGLGGVIASFGLILDLIGFVLFLIFVLVSSVIMLTRENAVPNTAVPIK
Ga0182025_102706413300019786PermafrostRRTPALLNSRVLPRWLGWVSIVVGSMFFLQGFGLGGVIASFGLILDLIGFVLLLIFVLGSSVTLLMRTGTVPDTPGESK
Ga0182031_140087573300019787BogVIGSGVLPRWLGWVSILAGILFFLQAFGLGGVIASFGLVLDGIAFVLFVIFVLVSSVILLTRQKRGPRHPG
Ga0210407_1116759613300020579SoilILFFLQGFGLGGVIASFGLVLDLIGFVLFLIFVLVSSVILLTRENALPDTAGGIK
Ga0210395_1037339213300020582SoilFFLQGFGLGGVIASFGLVLDLIGFVLFLIFVLVSSVILLTRENALPDTAGGIK
Ga0210388_1147672813300021181SoilLGGVIASFGLVLDLIGFVLFLIFVLVSSVILLTRENALPDTSGEIK
Ga0213873_1023904223300021358RhizosphereFLQGFGLGGVIASFGLVIDLIGFVLFLIFVLVSSVILLTRENALPDTAGRIK
Ga0210393_1043769613300021401SoilLFFLQGFGLGGVIASFGLVLDLIGFVLFLIFVLVSSVILLTRENALPDTAGGIK
Ga0210393_1111379413300021401SoilVIEHGVLPRWLGWVSILVGILFFLQGFGLGGVIASFGLVLDLIGFVLFLIFVLVSSVILLTRENALPDTAGEIK
Ga0210385_1017032333300021402SoilPRWLGWVSILAGILFFLQGFGLGGVIASFGLVVDLIAFVLFLIFVLVSSVILLTRQNAVPDTAGAIE
Ga0210397_1044566513300021403SoilGGVIASFGLVLDLIGFVLFLIFVLVSSVILLTRENALPDTAGRIK
Ga0210387_1075740313300021405SoilGVLPRWLGWVSILAAPLLFLQAFGLGGVIASFGLVLDLIGFVLVLVFVLVSSIVSLRSERSVGAPAQVG
Ga0208076_105059723300025464Arctic Peat SoilQGPAALAGVGLILAGILFFLQGLGLGSVTASFGLVLDGIGFVLFVIFVLVSSVILLARENALPGTAGSLHSGG
Ga0208848_104265613300025509Arctic Peat SoilGILFFLQGFGLGGVIASFGLVLDLIAFVLFLIFVLVSSVILLARENALPGTAGSLHSGG
Ga0208820_107415613300025576PeatlandLPRWLGWASILAGILFFLQGFGLGGVIASFGLVLDLIAFVLFLIFVLVSSVILLTRQNALPGTAGGIE
Ga0207930_105755323300025604Arctic Peat SoilLFLQGFGLGGVIASFGLILDLIGFVLFLIFVLVSSVIMLTRENAVPNTAVQIK
Ga0209890_1004203323300026291SoilLFFLQGFGLGGVIATFGLGLDGKGFVLFLIFVLVSSVTFLRRESAVPSTSGGI
Ga0208827_101987913300027641Peatlands SoilFLQGFGLGGVIASFGLVLDLIGFVLLLVVVLVSSIILLARED
Ga0208565_108311113300027662Peatlands SoilGSMLFLQGFGLGGVIASFGLVLDLIGFLLLLVVVLVSSIILLARED
Ga0208696_121310913300027696Peatlands SoilLAGSMLFLQGFGLGGVIASFGLVLDLIGFLLLLVFVLVSSVILVMRESAAPDTAGAIG
Ga0209177_1001057223300027775Agricultural SoilLILAGIVFFLQGFGLGGVIASFGLVLDLIGFALFLIFVLASSVILLTRERRAPLIAGGIELDNLVQASSATR
Ga0209039_1001007413300027825Bog Forest SoilGSLLFLQGFGLGGVIASFGLVLDLIGFVLLLVVVLVSSIILLAREDPIPISEQA
Ga0209624_1014824833300027895Forest SoilLPRWLGWMSIVAGLMFFLQAFGLGGVIASFGLVLDIIGFVLFLIFVLASSIIFLGRPTAVCDTAAAAIS
Ga0209067_1071395913300027898WatershedsSCVLPRWLGWVSILAAPLLFLQAFGLGGVIASFGLVLDLIGFVLLLVFVLVSSIVSLRSERSVGAPAQVG
Ga0209698_1058564613300027911WatershedsLQGFGLGGVIASFGLVLDLIAFVLFLIFVLVSSVILLTRQNAVPDTAGGIE
Ga0302202_1037861023300028762BogASGVLPRWLGWVSILVGILFFLQGFGLGIATFGVVLDGIGFVLLLVFVLVSSVLLLRRESAVPSISGGD
Ga0302198_1026888723300028765BogGGVIATFGLVLDGIGFVLFLIFVLVSSVIFVRRESAAPDTSGGIN
Ga0302234_1026090223300028773PalsaVTWGLAELPGIFFFLQGFGLGGVIATFGLVLDGIGCVLLLIFVLVSSVTLLRRESAVPSTSGGDN
Ga0302231_1036731513300028775PalsaFLQGFGLGIATFGVVLDGIGFVLLLIFVLVSSVILLRRESARSPAPRVE
Ga0302223_1011472423300028781PalsaSGVLPRWLGWVSILAGIMLFLQGFGLGGVIASFGLVLDLIGFVLFLIFVLVSSVIMLTRANAVPNTAVQIK
Ga0302232_1020048723300028789PalsaGVIATFGLVLDGIGCVLLLIFVLVSSVTLLRRESAVPSTSGGDN
Ga0302227_1003647823300028795PalsaVGILFFLQGFGLGGVIATFGLVLDGIGFVLFLIFVLVSSVIFVRRESAAPDTSGGIN
Ga0302228_1051144423300028808PalsaLGGVIATFGLVLDGIGCVLLLIFVLVSSVTLLRRESAVPSTSGGDN
Ga0311358_1103857813300029915BogLVIASGVLPRWLGWVSILVGILFFLQGFGLGIATFGVVLDGIGFVLLLVFVLVSSVLLLRRESAVPSISGGD
Ga0311326_1037780823300029917BogWVSIVVGSMFFLQGFGLGGVIASFGLILDLIGFVLLLIFVLGSSVTLLMRTGTVPDTPGESK
Ga0311346_1035207113300029952BogALLLNSRVLPRWLGWVSILVGILFFLQGFGLGIATFGVVLDGIGFVLLLVFVLVSSVLLLRRESAVPSISGGD
Ga0311339_1084235423300029999PalsaIAIVAGILLFLQAFGLGGVIASFGLVLDIIGFVLFLIFVLVSSVILLRRDDAVPNTASSLNR
Ga0311338_1008432843300030007PalsaIRSGVLPRWLGWVSILAGIMLFLQGFGLGGVIASFGLVLDLIGFVLFLIFVLVSSVIMLTRTNAVSSTAARPI
Ga0311338_1086583013300030007PalsaLAGIMLFLQGFGLGGVIASFGLILDLIGFVLFLIFVLVSSVIMLTRENAVPTTAVQIK
Ga0302178_1005930723300030013PalsaVTWGLAELPGIFFFLQGFGLGGVIATFGLVLDGIGCVLLLIFVLVSSVTLLRRESAVPSTSGGD
Ga0302193_1006641013300030519BogIRSGVLPRWLGWVAILVGILFFLQGFGLGGVIATFGLVLDGIGFVLFLIFVLVSSVIFVRRESAAPDTSGGIN
Ga0311372_1040349213300030520PalsaVSILAGIMLCLQGFGLGGVIASFGLILDLIGFVLFLIFVVASSVIMLTRENAVPDAWKARTRDA
Ga0311372_1176935913300030520PalsaFLQGFGLGGVIASFGLVLDLIGFLLLLVFVLVSSVILVMRESAAPNTAGAIS
Ga0311356_1041423713300030617PalsaGLAELPGIFFFLQGFGLGGVIATFGLVLDGIGCVLLLIFVLVSSVTLLRRESAVPSTSGGDN
Ga0302314_1038707713300030906PalsaQGFGLGGVIASFGLILDLIGFVLFLIFVVASSVIMLTRENAVPDAWKARTRDA
Ga0302323_10114580423300031232FenLPRWLAWVGIVTAIGLLLQGFGLGGVIATFGLVLDLIGFVLLMLFVLMSSVILLRRENALRSSWSA
Ga0302325_1231603813300031234PalsaIMLFPQGFGLGGVIASFGLVLDLIGFVLFLIFVLVSSVIMLTRTNAVSSTAARPI
Ga0302324_10030814833300031236PalsaMRDPRWLGWLSILAGSMLFLQGFGLGGVIASFGLVLDLIGFLLLLVFVLVSSVILRMRKSAALDTAGAIN
Ga0302324_10099844723300031236PalsaIGSGVLPRWLGWVSILAGILFFLQAFGLGGVIASFGLVLDGIAFVLFLIFVLVSSVILLTRQNAVPDTAGAIE
Ga0302324_10184084923300031236PalsaRSLGWVSILAGIMLFLQGFGLGGVIASFGLILDLIGFVLFLIFVLVSSVIMLTRENAVPTTAVQIK
Ga0302326_1111956413300031525PalsaLVLRSGVLPRWLGWMSILAGSMLFLQGFGLGGVIASFGLVLDLIGFVLLLVFVLVSSVILVMRKSTAPDTAAAIT
Ga0302326_1242417323300031525PalsaWLGWVSILAGIMLFLQAFGLGGVIASFGLILDLIGFVLFLIFVLVSSVIMLTRENAVPNTAVQIK
Ga0310686_10648695423300031708SoilGWVSILAAPLLFLQAFGLGGVVASFGLVLDLIGFVLLLLFVLVSSVTLLRRESAIRDTGG
Ga0310686_10770637023300031708SoilGGLFFLQAFGLGGVIASFGLVLEIIGFVLFLLFVIVSSVIKLARENAVPSTAAPIE
Ga0318496_1045330713300031713SoilGILPRWLGWASIVAGIMFFLQGFGLGGAIATFGLVLDLIGFVLFLTFVLVSSVILLKRENRGPLASGGG
Ga0302321_10241826013300031726FenQGFGLGGVIATFGLVLDLIGFVLLLLFVLMSSVILLRRENAVRKTAARIG
Ga0318522_1020916123300031894SoilILPRWLGWASIVAGIMFFLQGFGLGGAIATFGLVLDLIGFVLFLTFVLVSSVILLKRENRGPLAAGGG
Ga0318533_1050721833300032059SoilGLGGVIATFGLVLDLIGFVLFLTFVLVSSVILLKRENRGPLAAGGG
Ga0318505_1062990313300032060SoilWLGWASILAGIMFFLQGFGLGGVIATFGLVLDLIGFVLFLTFVLVSSVILLRRENRGPLAAGGG
Ga0311301_1043179733300032160Peatlands SoilLPGSRFVAILLFVQAFGLGGVMASFGLLFDLIGFVLLLFFVLASCVILLRREGAVRYTGG
Ga0311301_1183123423300032160Peatlands SoilVIGSGVLPRWLGWVSILAGILFFLQGFGLGGVIASFGLVLDLIAFVLFLIFVLVSSVILLRRQNAVPDTAGAIE
Ga0311301_1188613813300032160Peatlands SoilFGLGGVIASFGLVLDLIGFVLFLIFVLVSSVILLTRENALPDTAGGIE
Ga0335078_1094284613300032805SoilGWISILAGALFFLQGFGLGGVIGTFGLVLDLIGFVLLLIFVLVSSALLLRREGALRHAAAGIR
Ga0335078_1237246623300032805SoilMPRWLGWVSILAAPLLFLQAFGLGGVIASFGLVLDLIGFVMLLVFVLISSMVSLRMEPPS
Ga0335074_1142084313300032895SoilVSILVGILFFLQGFGLGGVIASFGLVLDLIGFVLFLIFVLVSSVILLTRENALPDTAGGI
Ga0335072_1155082423300032898SoilGILLFLQGFGLGGVIASFGLVLDIIGFLLLLIFVLASSVILLRREAAT
Ga0334804_165380_1_1533300033818SoilQGFGLGGVIASFGLILDLIGFVLFLIFVLVSSVIMLTRENAVPNTAIQIK
Ga0334850_063475_15_1793300033828SoilMLFLQGFGLGGVTASFGLVLDLIGFLLLLVFVLASSIILVMRKSAAAGTASAIS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.