Metagenome / Metatranscriptome Family F064973

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064973
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	75 residues
Representative Sequence	MSDRLDEEKLAQIRAWAEAMLTDERAESRAAARGLLMLADEIERLWEASRHAFANDIGTALAQRLGTE
Number of Associated Samples	100
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.34 %
% of genes near scaffold ends (potentially truncated)	26.56 %
% of genes from short scaffolds (< 2000 bps)	88.28 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.344 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (39.844 % of family members)
Environment Ontology (ENVO)	Unclassified (45.312 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.781 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.46% β-sheet: 0.00% Coil/Unstructured: 38.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF02074	Peptidase_M32	16.41
PF00202	Aminotran_3	3.91
PF00107	ADH_zinc_N	2.34
PF08734	GYD	2.34
PF02812	ELFV_dehydrog_N	1.56
PF13614	AAA_31	1.56
PF00072	Response_reg	0.78
PF13088	BNR_2	0.78
PF14572	Pribosyl_synth	0.78
PF14693	Ribosomal_TL5_C	0.78
PF07099	DUF1361	0.78
PF00041	fn3	0.78
PF13155	Toprim_2	0.78
PF05199	GMC_oxred_C	0.78
PF04986	Y2_Tnp	0.78
PF08031	BBE	0.78
PF04961	FTCD_C	0.78
PF02600	DsbB	0.78
PF06723	MreB_Mbl	0.78
PF12697	Abhydrolase_6	0.78
PF00254	FKBP_C	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG2317	Zn-dependent carboxypeptidase, M32 family	Posttranslational modification, protein turnover, chaperones [O]	16.41
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	2.34
COG0334	Glutamate dehydrogenase/leucine dehydrogenase	Amino acid transport and metabolism [E]	1.56
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.78
COG1077	Cell shape-determining ATPase MreB, actin-like superfamily	Cell cycle control, cell division, chromosome partitioning [D]	0.78
COG1495	Disulfide bond formation protein DsbB	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.78
COG3404	Formiminotetrahydrofolate cyclodeaminase	Amino acid transport and metabolism [E]	0.78
COG4330	Uncharacterized membrane protein, DUF1361 domain	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.34 %
Unclassified	root	N/A	22.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.34 %
Unclassified	root	N/A	22.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.34 %
Unclassified	root	N/A	22.66 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	54.69 %
Unclassified	root	N/A	22.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.56 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	46.88 %
Unclassified	root	N/A	22.66 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.56 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.56 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	32.81 %
Unclassified	root	N/A	22.66 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	2.34 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.56 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.56 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	31.25 %
Unclassified	root	N/A	22.66 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	2.34 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.56 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.56 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.56 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	31.25 %
Unclassified	root	N/A	22.66 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	2.34 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	1.56 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.56 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.56 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	31.25 %
Unclassified	root	N/A	22.66 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	2.34 %
Paraburkholderia phenoliruptrix	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia phenoliruptrix	1.56 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.56 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.56 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001535\|A3PFW1_10551513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300001538\|A10PFW1_12451989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1377	Open in IMG/M
3300004153\|Ga0063455_100727397	Not Available	673	Open in IMG/M
3300004479\|Ga0062595_100034875	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2122	Open in IMG/M
3300004479\|Ga0062595_101908749	Not Available	569	Open in IMG/M
3300005171\|Ga0066677_10237547	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300005176\|Ga0066679_11050551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300005177\|Ga0066690_10182961	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300005178\|Ga0066688_10478399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300005179\|Ga0066684_10255759	Not Available	1151	Open in IMG/M
3300005181\|Ga0066678_11072745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300005336\|Ga0070680_101446440	Not Available	595	Open in IMG/M
3300005436\|Ga0070713_102061826	Not Available	553	Open in IMG/M
3300005439\|Ga0070711_101899886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300005454\|Ga0066687_10071607	All Organisms → cellular organisms → Bacteria	1680	Open in IMG/M
3300005454\|Ga0066687_10174706	Not Available	1155	Open in IMG/M
3300005458\|Ga0070681_10411127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1265	Open in IMG/M
3300005471\|Ga0070698_100096733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2929	Open in IMG/M
3300005530\|Ga0070679_101932093	Not Available	539	Open in IMG/M
3300005553\|Ga0066695_10083788	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1940	Open in IMG/M
3300005556\|Ga0066707_10110358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1702	Open in IMG/M
3300005558\|Ga0066698_10821953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300005559\|Ga0066700_10277845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1177	Open in IMG/M
3300005561\|Ga0066699_10420857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	956	Open in IMG/M
3300005568\|Ga0066703_10105389	Not Available	1662	Open in IMG/M
3300005575\|Ga0066702_10507108	Not Available	734	Open in IMG/M
3300005586\|Ga0066691_10676841	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300005587\|Ga0066654_10128350	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300005614\|Ga0068856_100179503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2130	Open in IMG/M
3300006032\|Ga0066696_10205768	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300006175\|Ga0070712_100836668	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300006796\|Ga0066665_11129846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300006800\|Ga0066660_10016077	All Organisms → cellular organisms → Bacteria	4231	Open in IMG/M
3300007255\|Ga0099791_10397318	Not Available	663	Open in IMG/M
3300009012\|Ga0066710_100495834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1840	Open in IMG/M
3300009012\|Ga0066710_102668956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	714	Open in IMG/M
3300009012\|Ga0066710_103727972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300009038\|Ga0099829_10109090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia phenoliruptrix	2164	Open in IMG/M
3300009038\|Ga0099829_10212789	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1568	Open in IMG/M
3300009038\|Ga0099829_10616310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	902	Open in IMG/M
3300009088\|Ga0099830_10614205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	892	Open in IMG/M
3300009088\|Ga0099830_10922540	All Organisms → cellular organisms → Bacteria → Terrabacteria group	722	Open in IMG/M
3300009089\|Ga0099828_10698750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	911	Open in IMG/M
3300009089\|Ga0099828_10833125	All Organisms → cellular organisms → Bacteria → Terrabacteria group	826	Open in IMG/M
3300009090\|Ga0099827_11044617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300009090\|Ga0099827_11897173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300009090\|Ga0099827_11979389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300009137\|Ga0066709_100718228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1439	Open in IMG/M
3300009137\|Ga0066709_103591622	Not Available	563	Open in IMG/M
3300009137\|Ga0066709_104217339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300009143\|Ga0099792_10635346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M
3300009545\|Ga0105237_11539839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300010154\|Ga0127503_10713482	Not Available	968	Open in IMG/M
3300010326\|Ga0134065_10344846	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300010373\|Ga0134128_10762886	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300010373\|Ga0134128_12071405	Not Available	627	Open in IMG/M
3300011269\|Ga0137392_10358129	Not Available	1209	Open in IMG/M
3300011269\|Ga0137392_10718942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	826	Open in IMG/M
3300011271\|Ga0137393_10491863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1052	Open in IMG/M
3300011271\|Ga0137393_11512974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300012001\|Ga0120167_1068631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752	Open in IMG/M
3300012005\|Ga0120161_1093262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300012014\|Ga0120159_1129544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300012096\|Ga0137389_10037310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3582	Open in IMG/M
3300012096\|Ga0137389_10153943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia phenoliruptrix	1884	Open in IMG/M
3300012096\|Ga0137389_11139853	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300012189\|Ga0137388_10042209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3642	Open in IMG/M
3300012198\|Ga0137364_10354149	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300012198\|Ga0137364_11002948	Not Available	631	Open in IMG/M
3300012199\|Ga0137383_10681381	Not Available	751	Open in IMG/M
3300012200\|Ga0137382_10118809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1765	Open in IMG/M
3300012200\|Ga0137382_11309180	Not Available	511	Open in IMG/M
3300012202\|Ga0137363_11126525	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300012204\|Ga0137374_10011875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10182	Open in IMG/M
3300012206\|Ga0137380_11321333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300012207\|Ga0137381_10238089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1581	Open in IMG/M
3300012207\|Ga0137381_11269951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	629	Open in IMG/M
3300012208\|Ga0137376_10377859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1230	Open in IMG/M
3300012208\|Ga0137376_10415760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1168	Open in IMG/M
3300012209\|Ga0137379_10314397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1477	Open in IMG/M
3300012209\|Ga0137379_10770782	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300012210\|Ga0137378_11320752	Not Available	637	Open in IMG/M
3300012211\|Ga0137377_11327932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300012211\|Ga0137377_11535864	Not Available	591	Open in IMG/M
3300012350\|Ga0137372_10102035	Not Available	2405	Open in IMG/M
3300012351\|Ga0137386_11165199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300012356\|Ga0137371_10344180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1159	Open in IMG/M
3300012359\|Ga0137385_11112112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	650	Open in IMG/M
3300012362\|Ga0137361_10287532	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1503	Open in IMG/M
3300012363\|Ga0137390_10079118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3229	Open in IMG/M
3300012925\|Ga0137419_11951428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300012929\|Ga0137404_11114187	Not Available	724	Open in IMG/M
3300012944\|Ga0137410_11153524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300012955\|Ga0164298_10150164	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300012960\|Ga0164301_10922603	Not Available	679	Open in IMG/M
3300012975\|Ga0134110_10406320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605	Open in IMG/M
3300012988\|Ga0164306_10711092	All Organisms → cellular organisms → Bacteria → Terrabacteria group	799	Open in IMG/M
3300013105\|Ga0157369_10013560	All Organisms → cellular organisms → Bacteria	9214	Open in IMG/M
3300013768\|Ga0120155_1093429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	845	Open in IMG/M
3300013772\|Ga0120158_10083281	All Organisms → cellular organisms → Bacteria	1998	Open in IMG/M
3300013772\|Ga0120158_10087630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1925	Open in IMG/M
3300013772\|Ga0120158_10220378	Not Available	973	Open in IMG/M
3300013832\|Ga0120132_1026672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1044	Open in IMG/M
3300014823\|Ga0120170_1121851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300014827\|Ga0120171_1106350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300015242\|Ga0137412_10897328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300015264\|Ga0137403_10148335	All Organisms → cellular organisms → Bacteria	2313	Open in IMG/M
3300015371\|Ga0132258_11318289	Not Available	1824	Open in IMG/M
3300015374\|Ga0132255_100649347	Not Available	1563	Open in IMG/M
3300018071\|Ga0184618_10281505	Not Available	706	Open in IMG/M
3300019888\|Ga0193751_1031388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2483	Open in IMG/M
3300019888\|Ga0193751_1045898	All Organisms → cellular organisms → Bacteria	1916	Open in IMG/M
3300020002\|Ga0193730_1068997	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300025912\|Ga0207707_10250969	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300026078\|Ga0207702_10098633	All Organisms → cellular organisms → Bacteria	2574	Open in IMG/M
3300026318\|Ga0209471_1267805	All Organisms → cellular organisms → Bacteria → Terrabacteria group	575	Open in IMG/M
3300026322\|Ga0209687_1074249	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300026322\|Ga0209687_1244618	Not Available	556	Open in IMG/M
3300026528\|Ga0209378_1142734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	978	Open in IMG/M
3300026550\|Ga0209474_10048497	All Organisms → cellular organisms → Bacteria	3050	Open in IMG/M
3300026552\|Ga0209577_10228533	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300027846\|Ga0209180_10216630	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300027846\|Ga0209180_10696027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300027903\|Ga0209488_10372919	Not Available	1059	Open in IMG/M
3300028799\|Ga0307284_10035107	All Organisms → cellular organisms → Bacteria	1699	Open in IMG/M
3300031231\|Ga0170824_124084476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	503	Open in IMG/M
3300031446\|Ga0170820_14468861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	506	Open in IMG/M
3300032180\|Ga0307471_101374488	Not Available	867	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.31%
Host-Associated	Host-Associated	4.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.75%
Plants	Host-Associated → Plants	4.69%
Aquatic	Environmental → Aquatic	1.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.56%
Freshwater	Environmental → Aquatic → Freshwater	0.78%
Sediment	Environmental → Aquatic → Sediment	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.94%
Loam	Environmental → Terrestrial → Soil → Loam	7.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.56%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.44%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.22%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	9.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.34%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	39.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	19.53%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	9.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.47%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.12%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.12%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.56%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012001	Permafrost microbial communities from Nunavut, Canada - A24_80cm_12M	Environmental	Open in IMG/M
3300012005	Permafrost microbial communities from Nunavut, Canada - A15_80cm_0M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300014827	Permafrost microbial communities from Nunavut, Canada - A3_80cm_18M	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A3PFW1_105515132	3300001535	Permafrost	HGDRRDSPSHRRRKPASRAGRANLSAGMGGRLDQEKLAQIRAWAEAMLTDERAESRAAARGLLMLADEIERLWEASRHSFANDIGTALAHRLGTESTTAPSDGAL
A10PFW1_124519892	3300001538	Permafrost	ASRAGRANLSAGMGGRLDQEKLAQIRAWAEAMLTDERAESRAAARGLLMLADEIERLWEASRHSFANDIGTALAHRLGTESTTAPSDGAL*
Ga0063455_1007273971	3300004153	Soil	HAPLYAQSNVADRLDEEKLRQIRVWAEALLTDEREDSRAAARALLLLAEEVERLWEANRTAFGRDVATALTERLGADRRRSQ*
Ga0062595_1000348753	3300004479	Soil	MTERIDEEKLAQIRAWAETMLKDERADSRAAARGLLLLADEIERLWEASRTAFANDIGTALADRLGTAPPALHD*
Ga0062595_1019087491	3300004479	Soil	MGDQLDEEKLAQIRAWAETMLADERSDSRAAARGLLLLADEVERLWESSRQAFASDLGTIGAAALAHRL
Ga0066677_102375472	3300005171	Soil	MAERLDEEKLAQIRAWAETMLSDERSESRAAARGLLLLADEIERLWEANRTAFANDIGAALAQRLGTD*
Ga0066679_110505511	3300005176	Soil	MDDRIDEEKLAQIRAWAEAMLTDERAESRAAARGLLLLADEIERLWEASRHAFASDIGTALAQRLGTESPTTPIEGAS*
Ga0066690_101829612	3300005177	Soil	MAERLDEEKLAQIRAWAEAMLTDERSESRAAARGLLLLADEIERLWEANRTAFANDIGAALAQRLGTD*
Ga0066688_104783991	3300005178	Soil	MDDRLDEEKLAQIRAWAETMLADDRAELRAAARGLLLMADEIEHLWEASRSAFANDVGAALAQRLGTD*
Ga0066684_102557591	3300005179	Soil	MDDRLDEEKLAQIRAWAETMLADDRVELRAAARGLLLMADEIEHLWEASRSAFANDVGAALAQRLGTD*
Ga0066678_110727451	3300005181	Soil	MADRLDEEKLAQIRAWAEVMLTDERADSRAAARGLLLMADEIERLWEASRTAFANDIGTALAHRLGTD*
Ga0070680_1014464401	3300005336	Corn Rhizosphere	VAERLDEEKLRQIRAWAETLLADEREDARAAARALLLLADEVERLWEANRTAFARDVTTALTERLGAGPAGPE*
Ga0070713_1020618261	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTERIDEAKLAQIRAWAETMLKDERADSRAAARGLLLLADEVERLWEASRTAFANDIGTALADRLGTAPPALHD*
Ga0070711_1018998861	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MADRVDEEKLAQIRAWAEAMLTDERAESRAAARGLLLLADEIELLWEASRNAFVSDIGSALAQRLGTESSSTAPD*
Ga0066687_100716071	3300005454	Soil	MAERLDEEKLAQIRAWAEAMLTDERSESRAAARGLLLLADEIERLWEANRTAFANDVGAALAQRLGTD*
Ga0066687_101747062	3300005454	Soil	MAERLDEEKLAQIRAWAETMLTDERSESRAAARGLLLLADEIERLWEANRTAFANDIGAALAQRLGTG*
Ga0070681_104111271	3300005458	Corn Rhizosphere	TRAHAPACTLGCDVAERLDEEKLRQIRAWAETLLADDREDARAAARALLLLAEEVERLWEANRTAFARDVTTALTERLGAGPAGPE*
Ga0070698_1000967334	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAERLDEEKLAQVRAWAEAMLTDERPELRASARGLLLLADEVERLWEANRTAFANDIGAALAERLGTDAETAGSDDIKL*
Ga0070679_1019320931	3300005530	Corn Rhizosphere	DEEKLRQIRAWAETLLADEREDARAAARALLLLADEVERLWEANRTAFARDVTTALTERLGAGPAGPE*
Ga0066695_100837882	3300005553	Soil	MPEPLDEEKVAQLRAWAELMLTDERADLRAAARGLLMLADEVERLWRISRTALGSDLGTALAQRLGTDPSSRPTD*
Ga0066707_101103582	3300005556	Soil	VDERLDEQKLAQLRGWAEGLLTDPRPDLRAAARGLLLLADEVERLWLTGRDAFAGDIGTALAHRLGADSPRDETD*
Ga0066698_108219531	3300005558	Soil	GVSLSAAMPEPLDEEKVAQLRAWAELMLTDERADLRAAARGLLMLADEVERLWRISRTALGSDLGTALAQRLGTDPSSRPTD*
Ga0066700_102778453	3300005559	Soil	MADRLDEEKLSQIRAWAEAMLTDERAESRAAARGLLLLADEIDRLWEANRTAFANDIGAALAHRLGTD*
Ga0066699_104208571	3300005561	Soil	MGDRLDEEKLIQIRAWAEAMLTDERSESRAAARGLLLLADEIERLWASSRHAFANDIGKALADRLGTKASTAASNDEP*
Ga0066703_101053891	3300005568	Soil	IRNAAGAYRLVSAGMAERLDEEKLAQIRAWAEAMLTNERSESRAAARGLLLLADEIERLWEANRTAFANDIGAALAQRLGTD*
Ga0066702_105071082	3300005575	Soil	LAQIRAWAEAMLTDERSESRAAARGLLLLADEIERLWEANRTAFANDIGAALAQRLGTD*
Ga0066691_106768412	3300005586	Soil	MDDRLDEEKLAQIRAWAETMLADDRAELRAAARGLLLMADEIEHLWEASRSAFANDVGAALAQRL
Ga0066654_101283501	3300005587	Soil	MDDRLDEEKLAQIRAWAETMLADDRAELRAAARGLLLMADEIEHLWEASRAAFANDIGAA
Ga0068856_1001795033	3300005614	Corn Rhizosphere	MTDRLDEEKLAQIRAWAETMLDDERADSRAAARGLLLLADEVERLWETNRTAFANDIGAALADRLGTAPAAAPD*
Ga0066696_102057682	3300006032	Soil	MAERLDEEKLAQIRAWAEAMLTDERSESRAAARGLLLLADEIERLWQANRTAFANDIGAALAQRLGTD*
Ga0070712_1008366682	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTERIDEEKLAQIRAWAETMLKDERADSRAAARGLLLLADEVERLWEASRTAFANDIGTALADRLGTAPPALHD*
Ga0066665_111298461	3300006796	Soil	MPEPLDEEKVAQLRAWAELMLTDERADLRAAARGLLMLADEVERLWRISRTALGSDLGTALAQRLGTDPASRPTD*
Ga0066660_100160774	3300006800	Soil	MAERLDEEKLAQIRAWAEAMLTDERSESRAAARGLLLLADEIERLWEANRTAFANDIGAALAQRLGTG*
Ga0099791_103973182	3300007255	Vadose Zone Soil	MGDRLDEEKLAQIRAWAETMLADERPELRAAGRGLLLMADEVDRLWEARRLAFSSDIGTALAHRLGTEASDDT*
Ga0066710_1004958343	3300009012	Grasslands Soil	VDERLDEQKLAQLRGWAEGLLHDPRPDMRAAARGLLLLADEVERLWLTGRDAFAGDIGTALAHRLGADSPRDETD
Ga0066710_1026689562	3300009012	Grasslands Soil	MDDRLDEEKLEQIRAWAKTMLGDERADVRAAGRGLLLLADEVERLWEASRQAFASDIGSALADRLGAEQSGGPLTGGPLDSGRAL
Ga0066710_1037279721	3300009012	Grasslands Soil	MPEPLDEEKVAQLRAWAELMLTDERADLRAAARGLLMLADEVERLWRISRTALGSDLGTALAQRLGTDPASRPTD
Ga0099829_101090903	3300009038	Vadose Zone Soil	MVDQIDEEKLAQIRAWAETMLADERPELRAAGRGLLLMADEVDRLWEARRLAFSSDIGTALAHRLGTEASDDN*
Ga0099829_102127892	3300009038	Vadose Zone Soil	MDDRLDEEKLAQIRAWAEAMLTDERAESRAAARGLLLLADEIERLWEASRHAFASDIGTALAQRLGTELPADVRRDI*
Ga0099829_106163102	3300009038	Vadose Zone Soil	MSDQLDEEKLAQIRTWAEVMLTDERAESRAAARGLLMLADEIERLWDASRTAFANDIATALAHRRGTDSTTAPSEGTFVAPRDLGAD*
Ga0099830_106142052	3300009088	Vadose Zone Soil	MGDRLDEEKLAQIRAWAEAMLTEERAESRAAARGLLMLADEIERLWEASRHAFANDIGSALAQRLGTESPAPPAEGS*
Ga0099830_109225402	3300009088	Vadose Zone Soil	MGDRLDEDKLAQIRAWAEAMLTDERAESRAAARGLLLLADEIERLWEASRHAFASDIGTALAQRLGTELPADVRRDI*
Ga0099828_106987502	3300009089	Vadose Zone Soil	MGHQLDEEKLAQIRAWAETMLADERSELRAAGRGLLLMADEVERLWEARRLAFSSDIGTALAHRLGTEASDDN*
Ga0099828_108331251	3300009089	Vadose Zone Soil	KLAQIRAWAEAMLTEERAESRAAARGLLMLADEIERLWEASRHAFANDIGSALAQRLGTESPAPPAEGS*
Ga0099827_110446172	3300009090	Vadose Zone Soil	MVDQIDEEKLAQIRAWAETMLADERPELRAAGRGLLLMADEVDRLWEARRLAFSSDIGTALAHRLGTEASDDT*
Ga0099827_118971733	3300009090	Vadose Zone Soil	MADRLDEEKLAQIRAWAEVMLTGERVESRAAARGLLLLADEVERLWEASRQAFADDIGTALAHRLGTESTERSTESAL*
Ga0099827_119793891	3300009090	Vadose Zone Soil	MPDRLDEEKLAQIRAWAETMLTDERAESRAAARGLLLLADEVELLWEASRNAFAHDIASALAHRLGAKSTTAAPD*
Ga0066709_1007182282	3300009137	Grasslands Soil	MADRIDEEKLAQIRAWAEVMLTNERAESRAAARGLLLLADEIELLWEASRNAFANDIGTALAQRLGTESTATKAG*
Ga0066709_1035916222	3300009137	Grasslands Soil	MDDRLDEEKLEQIRAWAKTMLGDERADVRAAGRGLLLLADEVERLWEASRQAFASDIGSALADRLGAEQSGGPLTGGPLDSGRAL*
Ga0066709_1042173391	3300009137	Grasslands Soil	VDERLDEQKLAQLRGWAEGLLHDPRPDMRAAARGLLLLADEVERLWLTGRDAFAGDIGTALAHRLGADSPRDETD*
Ga0099792_106353462	3300009143	Vadose Zone Soil	MGDRLDEEKLAQIRAWAETMLAAERSESRAAARGLLLLADEIERLWESNRQAFASDLGTGTALAHRLGSGEHVER*
Ga0105237_115398392	3300009545	Corn Rhizosphere	MTDRLDEEKLAQIRAWAETMLDDERADSRAAARGLLLLADEVERLWEANRTAFANDIGAALADRLGTAPAAAPD*
Ga0127503_107134821	3300010154	Soil	MGDRLDEQQLAEIRAWAETMLADERAESRAAARGLMLLADEIERLWESSRQAFASDIGAALANRLGTESTAAAADDAS*
Ga0134065_103448462	3300010326	Grasslands Soil	DEEKLAQIRAWAETMLADDRVELRAAARGLLLMADEIEHLWEASRSAFANDVGAALAQRLGTD*
Ga0134128_107628862	3300010373	Terrestrial Soil	MTERIDEAKLAQIRAWAETMLKDERADSRAAARGLLLLADEIERLWGASRTAFANDIGTALADRLGTAPPALHD*
Ga0134128_120714052	3300010373	Terrestrial Soil	LYSRPDVAERLDEEKLRQIRAWAETLLADEREDARAAARALLLLAEEVERLWEANRTAFARDVTTALTERLGGGHDGPG*
Ga0137392_103581292	3300011269	Vadose Zone Soil	MVDQIDEEKLAQIRAWAETMLADERSELRAAGRGLLLMADEVERLWEARRLAFSSDIGTALAHRLGTEASDDT*
Ga0137392_107189422	3300011269	Vadose Zone Soil	MGDRLDEDKLAQIRAWAEAMLTDERAESRAAARGLLLLADEIERLWEASRHSFASDIGTALAQRLGTESTTAPSEGAS*
Ga0137393_104918632	3300011271	Vadose Zone Soil	MADQIDEEKLAQIRAWAETMLADERPELRAAGRGLLLMADEVERLWEARRLAFSSDIGTALAHRLGTEASDDT*
Ga0137393_115129741	3300011271	Vadose Zone Soil	MGDRLDEDKLAQIRAWAEAMLTDERAESRAAARGLLLLADEIERLWEASRHSFASDIGTALAQRLGTESTTTPSEGAS*
Ga0120167_10686311	3300012001	Permafrost	MVDPLTEEKLAQIRAWAEAMLTDERAESRAAARGLLMLADEIERLWEASRHSFANDIGTALAHRLGTESTTAPSDGAL*
Ga0120161_10932621	3300012005	Permafrost	MGGRLDQEKLAQIRAWAEAMLTDERAESRAAARGLLMLADEIERLWEASRHSFANDIGTALAHRLGTESTTAPSDGAL*
Ga0120159_11295441	3300012014	Permafrost	MSDRLDEEKLAQIRAWAEAMLTDERAESRAAARGLLMLADEIERLWEASRHAFANDIGTALAQRLGTESTTLKALTKVPGS*
Ga0137389_100373106	3300012096	Vadose Zone Soil	MGHQLDEEKLAQIRAWAETMLADERSELRAAGRGLLLMADEVERLWEARRLAFSSDIGTALAH
Ga0137389_101539431	3300012096	Vadose Zone Soil	LAQIRAWAETMLADERPELRAAGRGLLLMADEVDRLWEARRLAFSSDIGTALAHRLGTEASDDT*
Ga0137389_111398531	3300012096	Vadose Zone Soil	MGDHLDEDKLAQIRAWAEAMLTDERAESRAAARGLLLLADEIERLWEASRHSFASDIGTALAQRLGTESTTAPSEGAS*
Ga0137388_100422093	3300012189	Vadose Zone Soil	MGHQLDEEKLAQIRAWAETMLADERSELRAAGRGLLLMADEVERLWEARRLAFSSDIGTALAHRLGTEASDDT*
Ga0137364_103541492	3300012198	Vadose Zone Soil	MADRVDEEKLAQIRTWAQAMLTDERAESRAAARGLLLLADEIELLWEASRNAFVSDIGTALAQRLGTEPTGTPSDGAV*
Ga0137364_110029481	3300012198	Vadose Zone Soil	MADRIDEEKLAQIRAWAEVMLTNERAESRAAARGLLLLADEIELLWEASRNAFANDIGTALAQRLGTESTSPKAG*
Ga0137383_106813812	3300012199	Vadose Zone Soil	MADRVDEEKLAQIRVWAQALLTDERAELRAAARGLFLLADEIDRLREASRQAFADDIGTALADRLGTEPTHFS*
Ga0137382_101188092	3300012200	Vadose Zone Soil	MSERIDEEKLAQIRAWAEVMLADERAESRAAARGLLLLADEIELLWEASRNAFANDIGTALAQRLGTESTSTRAD*
Ga0137382_113091802	3300012200	Vadose Zone Soil	AMADRVDEEKLAQIRTWAQAMLTDERAESRAAARGLLLLADEIELLWEASRNAFVSDIGTALAQRLGTEPTGTPSDGAV*
Ga0137363_111265252	3300012202	Vadose Zone Soil	MADRVDEEKLAQIRAWAEAMLTDERAESRAAARGLLLLADEIELLWEASRNAFVSDIGTALAQRLGTESSAPAPD*
Ga0137374_100118753	3300012204	Vadose Zone Soil	MEGRLDEEKLAQIRAWAETMLNDERAESRASARGLLLLADEVERLWEANRTAFANDIGAALADRLGTDPSKAA*
Ga0137380_113213332	3300012206	Vadose Zone Soil	VDERLDDQKLAQLRGWAEGLLTDPRPDLRAAARGLLLLADEVERLWLTGRDAFAGDIGTALAHRLGADSPRDETD*
Ga0137381_102380893	3300012207	Vadose Zone Soil	MDDRLDEEKLEQIRAWAKTMLADERAELRAAGRGLLLMAEEIERLWEASRQAFASDIGTALADRLGAEQKSGGPLTGGPLDSRRAL*
Ga0137381_112699512	3300012207	Vadose Zone Soil	VDESLDEQKLAQLRGWAEGLLNDPRPDMRAAARGLFLLADEVERLWLTGRDAFADDIGTALAH
Ga0137376_103778593	3300012208	Vadose Zone Soil	MADQVDEEKLAQIRVWAQALLTDERAELRAAARGLFLLADEIDRLREASRQAFADDIGTALADRLGTGPTNFSEERPIRRRLP*
Ga0137376_104157603	3300012208	Vadose Zone Soil	MSERIDEEKLAQIRAWAEVMLADERAESRAAARGLLLLADEIELLWEASRNAFVSDIGTALAQRLGTESTTTRAD*
Ga0137379_103143972	3300012209	Vadose Zone Soil	MPAQLDDDKLAQLRAWARVMLGDERAELRAAARGLLLLADEVERLRDAGHGVFAPDIGAALAERLGTDPPEAPTDRPARSQV*
Ga0137379_107707821	3300012209	Vadose Zone Soil	VLSRKGVRANLPTEMADRVDEEKLAQIRAWAGTLLTAEQAELRAAARGLILLADEVDRLREASRQAFADDIGTALADRLGTEPTHFS*
Ga0137378_113207522	3300012210	Vadose Zone Soil	VDERLDEQKLAQLRGWAEGLLNDPRRPDMRAAARGLLLLADEVERLWLTGRDAFADDIGTALAHRLGADATRERTDETD*
Ga0137377_113279322	3300012211	Vadose Zone Soil	SAAMPEPLDEEKVAQLRAWAELMLTDERADLRAAARGLLMLADEVERLWRISRTALGSDLGTALAQRLGTDPSSRPTD*
Ga0137377_115358641	3300012211	Vadose Zone Soil	QLDDEKLAQLRAWARVMLGDERAELRAAARGLLLLADEVERLRDAGHGVFAPDIGAALAERLGTDPPEAPTDRPARSQV*
Ga0137372_101020354	3300012350	Vadose Zone Soil	MEGRLDEEKLAQIRAWAETMLNDERAESRASARGLLLLADEVERLWEANRTAFANDIGSALADRLGTDPSKAA*
Ga0137386_111651991	3300012351	Vadose Zone Soil	LDEDKLAQIRAWAEAMLTDERAESRAAARGLLLLADEIERLWEASRHSFASDIGTALAQRLGTESTTAPSEGAS*
Ga0137371_103441802	3300012356	Vadose Zone Soil	MADRIDEEKLAQIRAWAKVMLTDQRAESRAAARGLLLLADEIELLWEASRNAFANDIGTALAERLGTESTTTKAG*
Ga0137385_111121121	3300012359	Vadose Zone Soil	VDERLDEQKLAQLRGWAEGLLHDPRPDMRAAARGLLLLADEVERLWLTGRDAFAGDIGTALAHRLGADSP
Ga0137361_102875323	3300012362	Vadose Zone Soil	NLPTEMADRVDEEKLAQIRVWAEALLTDERAELRAAARGLVLLADEIDRLREASRQAFADDIGMALADRLGTGPTDTSEERPIRRRLP*
Ga0137390_100791182	3300012363	Vadose Zone Soil	MGDRLDEDKLAQIRAWAEAMLTDERAESRAAARGLLMLADEIERLWEASRHAFANDIGSALAQRLGTESHAPPAEGS*
Ga0137419_119514281	3300012925	Vadose Zone Soil	MGDRFDEDKLAQIRTWARAMLDDERAELRAAARGLLMLADEVERLWEASRLAFVEDIGTALAQRLGTEPATARS
Ga0137404_111141871	3300012929	Vadose Zone Soil	MADRIDEEKLAQIRAWAEVMLTDERAESRAAARGLLMLAYEIELLWEASRNAFVSDIGTALAQRLGTESTATKAG*
Ga0137410_111535242	3300012944	Vadose Zone Soil	MGDRLDEEKLAQIRAWAEAMLTEERAESRAAARGLLMLADEIERLWEASRHAFANDIGSALAQRLGTESPAPPAEGA*
Ga0164298_101501642	3300012955	Soil	MADRVDEEKLAQIRAWAEAMLSDERAESRAAARGLLLLADEIELLWEASRNAFVSDIGTALAQRLGTESSSTAPD*
Ga0164301_109226031	3300012960	Soil	MADRVDEEKLAQIRAWAEAMLSDERAESRAAARGLLLLADEIELLWEASRNAFVSDIGTALAQRLGTESTNTTPG*
Ga0134110_104063202	3300012975	Grasslands Soil	VDERLDEQKLAQLRGWAEGLLHDPRPDMRAAARGLLLLADEVERLWLTGRDAFAGDIGTALAHRLGADSPRDATD*
Ga0164306_107110921	3300012988	Soil	DEAKLAQIRAWAETMLKDERADSRAAARGLLLLADEVERLWEASRTAFANDIGTALADRLGTAPPALHD*
Ga0157369_100135607	3300013105	Corn Rhizosphere	MTERIDEAKLAQIRAWAETMLKDERADSRAAARGLLLLADEVERLWEASRTAFANDIGTALADRLGTVPPALHD*
Ga0120155_10934291	3300013768	Permafrost	MSDRLHEEKLAQIRAWAEAMLTDERAESRAAARGLLMLADEIERLWEASRHSFANDIGTALAHRLGTESTTAPSDGAL*
Ga0120158_100832812	3300013772	Permafrost	MADRVDEEKLAQIRAWAEAMLTNERAESRAAARGLLLLAGEIELLWEASRNAFVSDIGTALAQRLGTELDHETV*
Ga0120158_100876303	3300013772	Permafrost	MGDQIDEEKLAQIRGWAGTMLADERVELRAAARGLLMLADEIERLREASRLAFVDDIGTALADRLAIQPAGAAP
Ga0120158_102203782	3300013772	Permafrost	MADRIDEEKLAQIRAWAEVMLTDQRAESRAAARGLLLLADEVELLWEASRNAFANDIASALANRLGTESTTAAPD*
Ga0120132_10266722	3300013832	Permafrost	MGDRVDEEKLAEIRAWAETMLADERPELRAAARGLLLLADEIEHLWETRRLAFASDIGTALAHRLGTDASDAT*
Ga0120170_11218511	3300014823	Permafrost	MSDRLDEEKLAQIRAWAEAMLTDERAESRAAARGLLMLADEIERLWEASRHAFANDIGTALAQRLGTE
Ga0120171_11063502	3300014827	Permafrost	MVDPLTEEKLAQIRAWAEAMLAGESVELRAAARGLLLLADEVDRLREASRHAFADLGAALADRLGTEPTTASSEGGLACL
Ga0137412_108973282	3300015242	Vadose Zone Soil	MADRVDEEKLAQIRAWAETMLVDERSQLRAAGRGLLLMADEVERLWEARRLAFSSDVGTALAHRLGTEAPDDN*
Ga0137403_101483352	3300015264	Vadose Zone Soil	MADRIDEEKLAQIRAWAEVMLTDQRAESRAAARGLLMLAYEIELLWEASRNAFVSDIGTALAQRLGTESTATKAG*
Ga0132258_113182892	3300015371	Arabidopsis Rhizosphere	VAERLDEEKLRQIRTWAEALLADEREDARAAARALLLLAEEVERLWEANRTAFARDVTTALTERLGAGPAGRE*
Ga0132255_1006493473	3300015374	Arabidopsis Rhizosphere	LDEEKLRQIRTWAEALLADEREDARAAARALLLLAEEVERLWEANRTAFARDVTTALTERLGAGPAGRE*
Ga0184618_102815052	3300018071	Groundwater Sediment	MADRVDEEKLAQIRTWAQAMLTDERAESRAAARGLLLLADEIELLWEASRNAFVSDIGTALAQRLGTEPTRTPSDGAV
Ga0193751_10313884	3300019888	Soil	MSNRLDEAKLAQIRTWAEQMLTDERVESRAAARGLLMLADEVERLWEANRHAFENDIGTALAHRLGTESAMGQSEDPF
Ga0193751_10458982	3300019888	Soil	MADRIDEEKLAQIRAWAEVMLTDQRAESRAAARGLLLLADEVELLWEASRNAFANDIASALANRLGTESTTAAPD
Ga0193730_10689972	3300020002	Soil	MGDRVDEEKLAQIRVWAEAMLTDERAESRAAARGLLLLADEIDLLWEASRNAFVSDIGTALAQRLGTEPTTTPSEGAF
Ga0207707_102509692	3300025912	Corn Rhizosphere	MTDRLDEEKLAQIRAWAETMLDDERADSRAAARGLLLLADEVERLWEANRTAFANDIGAALADRLGTAPAAAPD
Ga0207702_100986333	3300026078	Corn Rhizosphere	MTDRLDEEKLAQIRAWAETMLDDERADSRAAARGLLLLADEVERLWETNRTAFANDIGAALADRLGTAPAAAPD
Ga0209471_12678052	3300026318	Soil	MDDRIDEEKLAQIRAWAEAMLTDERAESRAAARGLLLLADEIERLWEASRHAFASDIGTALAQR
Ga0209687_10742491	3300026322	Soil	MAERLDEEKLAQIRAWAEAMLTDERSESRAAARGLLLLADEIERLWEANRTAFANDIGAALAQRLGTD
Ga0209687_12446182	3300026322	Soil	MAERLDEEKLAQIRAWAETMLTDERSESRAAARGLLLLADEIERLWEANRTAFANDIGAALAQRLGTG
Ga0209378_11427342	3300026528	Soil	VDERLDEQKLAQLRGWAEGLLTDPRPDLRAAARGLLLLADEVERLWLTGRDAFAGDIGTALAHRLGADSPRDETD
Ga0209474_100484972	3300026550	Soil	MDDRLDEEKLAQIRAWAETMLADDRVELRAAARGLLLMADEIEHLWEASRSAFANDVGAALAQRLGTD
Ga0209577_102285332	3300026552	Soil	MDDRLDEEKLAQIRAWAETMLADDRAELRAAARGLLLMADEIEHLWEASRSAFANDVGAALAQRLGTD
Ga0209180_102166302	3300027846	Vadose Zone Soil	MDDRLDEEKLAQIRAWAEAMLTDERAESRAAARGLLLLADEIERLWEASRHAFASDIGTALAQRLGTELPADVRRDI
Ga0209180_106960272	3300027846	Vadose Zone Soil	MVDQIDEEKLAQIRAWAETMLADERPELRAAGRGLLLMADEVDRLWEARRLAFSSDIGTALAHRLGTEA
Ga0209488_103729193	3300027903	Vadose Zone Soil	MGDRLDEEKLAQIRAWAETMLAAERSESRAAARGLLLLADEIERLWESNRQAFASDLGTGTALAHRLGSGEHVER
Ga0307284_100351073	3300028799	Soil	MADRVDEEKLAQIRAWAQAMLTDERAESRAAARGLLLLADEIELLWEASRNAFVSDIGTALAQRLGTEPTRTPSDGAV
Ga0170824_1240844761	3300031231	Forest Soil	LDEEKLEQIRAWAKAMLTDERAELRAAGRGLLLMAEEIERLWEASRQAFASDIGTALADRLGAEQKSGGPLTGGPLDSGRAL
Ga0170820_144688611	3300031446	Forest Soil	RLDEEKLEQIRAWAKAMLTDERAELRAAGRGLLLMAEEIERLWEASRQAFASDIGTALADRLGAEQKSGGPLTGGPLDSGRAL
Ga0307471_1013744882	3300032180	Hardwood Forest Soil	MGDQIDEEKLAQIRAWAETMLADERSELRAAGRGLLLMADEVERLWEARRLAFSSDIGTALAHRLGTEASDDT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064973

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences