Metagenome Family F065040

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065040
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	84 residues
Representative Sequence	MRTNGRSLLIAALIIVFLGAHAPSALAAQAKPLIKVVAGYGSTDGAVAPLWFAKETKLFEKRGLDVVLVGMGTGSVS
Number of Associated Samples	111
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.26 %
% of genes near scaffold ends (potentially truncated)	92.97 %
% of genes from short scaffolds (< 2000 bps)	88.28 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.562 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.625 % of family members)
Environment Ontology (ENVO)	Unclassified (32.812 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.625 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 36.19% β-sheet: 9.52% Coil/Unstructured: 54.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF01844	HNH	3.91
PF01177	Asp_Glu_race	3.12
PF07969	Amidohydro_3	3.12
PF05973	Gp49	3.12
PF02511	Thy1	1.56
PF12706	Lactamase_B_2	1.56
PF01381	HTH_3	1.56
PF13560	HTH_31	1.56
PF12697	Abhydrolase_6	1.56
PF05746	DALR_1	1.56
PF04255	DUF433	0.78
PF13091	PLDc_2	0.78
PF13635	DUF4143	0.78
PF09084	NMT1	0.78
PF00596	Aldolase_II	0.78
PF00355	Rieske	0.78
PF13551	HTH_29	0.78
PF13460	NAD_binding_10	0.78
PF13289	SIR2_2	0.78
PF01970	TctA	0.78
PF04250	DUF429	0.78
PF13343	SBP_bac_6	0.78
PF01370	Epimerase	0.78
PF06114	Peptidase_M78	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	3.12
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	3.12
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.56
COG0751	Glycyl-tRNA synthetase, beta subunit	Translation, ribosomal structure and biogenesis [J]	1.56
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	1.56
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.78
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.78
COG1784	TctA family transporter	General function prediction only [R]	0.78
COG2410	Predicted nuclease (RNAse H fold)	General function prediction only [R]	0.78
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.78
COG3333	TctA family transporter	General function prediction only [R]	0.78

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.53 %
Unclassified	root	N/A	5.47 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.53 %
Unclassified	root	N/A	5.47 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.56 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	17.97 %
Unclassified	root	N/A	5.47 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.31 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	17.97 %
Unclassified	root	N/A	5.47 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.56 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	17.97 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	14.06 %
Unclassified	root	N/A	5.47 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.56 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.56 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.78 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	17.97 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	14.06 %
Unclassified	root	N/A	5.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Acidobacteria bacterium JGI 0001001-H03	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium JGI 0001001-H03	0.78 %
Ignavibacteriae	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.78 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	17.97 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	13.28 %
Unclassified	root	N/A	5.47 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.78 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.78 %
Ignavibacteria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Acidobacteria bacterium JGI 0001001-H03	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium JGI 0001001-H03	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	17.97 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	13.28 %
Unclassified	root	N/A	5.47 %
unclassified Ignavibacteria	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria	0.78 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.78 %
Haematobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Haematobacter	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Acidobacteria bacterium JGI 0001001-H03	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium JGI 0001001-H03	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	17.97 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	13.28 %
Unclassified	root	N/A	5.47 %
Hungatella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Hungatella	0.78 %
Ignavibacteria bacterium RIFCSPLOWO2_12_FULL_56_21	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium RIFCSPLOWO2_12_FULL_56_21	0.78 %
Haematobacter massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Haematobacter → Haematobacter massiliensis	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Acidobacteria bacterium JGI 0001001-H03	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium JGI 0001001-H03	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	17.97 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	13.28 %
Unclassified	root	N/A	5.47 %
Hungatella hathewayi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Hungatella → Hungatella hathewayi	0.78 %
Ignavibacteria bacterium RIFCSPLOWO2_12_FULL_56_21	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium RIFCSPLOWO2_12_FULL_56_21	0.78 %
Haematobacter massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Haematobacter → Haematobacter massiliensis	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Acidobacteria bacterium JGI 0001001-H03	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium JGI 0001001-H03	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig531561	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300000787\|JGI11643J11755_11708543	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1012576	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300000891\|JGI10214J12806_10255089	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300000956\|JGI10216J12902_107664985	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300000956\|JGI10216J12902_113745546	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300003987\|Ga0055471_10191033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium JGI 0001001-H03	637	Open in IMG/M
3300004013\|Ga0055465_10372267	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300004052\|Ga0055490_10026857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1392	Open in IMG/M
3300004145\|Ga0055489_10245001	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300004267\|Ga0066396_10112140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	515	Open in IMG/M
3300004463\|Ga0063356_100590500	All Organisms → cellular organisms → Bacteria	1498	Open in IMG/M
3300005172\|Ga0066683_10290387	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300005178\|Ga0066688_10392731	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	899	Open in IMG/M
3300005294\|Ga0065705_10060496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Hungatella → Hungatella hathewayi	625	Open in IMG/M
3300005294\|Ga0065705_10368641	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	928	Open in IMG/M
3300005332\|Ga0066388_108410437	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005434\|Ga0070709_10982249	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300005445\|Ga0070708_101944464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Haematobacter → Haematobacter massiliensis	545	Open in IMG/M
3300005467\|Ga0070706_100127400	All Organisms → cellular organisms → Bacteria → Proteobacteria	2374	Open in IMG/M
3300005467\|Ga0070706_100177343	All Organisms → cellular organisms → Bacteria	1990	Open in IMG/M
3300005518\|Ga0070699_100803338	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300005536\|Ga0070697_100395283	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300005574\|Ga0066694_10446037	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300005713\|Ga0066905_101345181	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300005764\|Ga0066903_103597645	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	835	Open in IMG/M
3300005764\|Ga0066903_104365288	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300005873\|Ga0075287_1009105	Not Available	1181	Open in IMG/M
3300005875\|Ga0075293_1019303	Not Available	853	Open in IMG/M
3300005883\|Ga0075299_1007230	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	878	Open in IMG/M
3300005888\|Ga0075289_1075859	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300006173\|Ga0070716_100588719	All Organisms → cellular organisms → Bacteria → Proteobacteria	835	Open in IMG/M
3300006847\|Ga0075431_100054418	All Organisms → cellular organisms → Bacteria	4126	Open in IMG/M
3300006853\|Ga0075420_101720013	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300006904\|Ga0075424_100294300	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300007076\|Ga0075435_100305476	All Organisms → cellular organisms → Bacteria → Proteobacteria	1361	Open in IMG/M
3300009012\|Ga0066710_100073364	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	4408	Open in IMG/M
3300009089\|Ga0099828_10540204	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300009100\|Ga0075418_12271097	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	592	Open in IMG/M
3300009100\|Ga0075418_12317573	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300009147\|Ga0114129_11315443	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	895	Open in IMG/M
3300009147\|Ga0114129_12242856	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300009157\|Ga0105092_10050368	All Organisms → cellular organisms → Bacteria	2234	Open in IMG/M
3300009162\|Ga0075423_12450521	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	569	Open in IMG/M
3300009168\|Ga0105104_10604588	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	624	Open in IMG/M
3300009171\|Ga0105101_10456615	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300009176\|Ga0105242_10954944	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300009610\|Ga0105340_1428760	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300009678\|Ga0105252_10561707	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300010043\|Ga0126380_10455194	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300010046\|Ga0126384_11528388	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300010047\|Ga0126382_11656888	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300010360\|Ga0126372_10503331	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300010362\|Ga0126377_13264695	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300010397\|Ga0134124_10881482	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	900	Open in IMG/M
3300011271\|Ga0137393_11012746	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	707	Open in IMG/M
3300011432\|Ga0137428_1196056	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300011439\|Ga0137432_1051773	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300012189\|Ga0137388_11587756	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300012200\|Ga0137382_10117873	All Organisms → cellular organisms → Bacteria → Proteobacteria	1771	Open in IMG/M
3300012204\|Ga0137374_10245575	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300012207\|Ga0137381_10860454	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300012208\|Ga0137376_10137353	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2097	Open in IMG/M
3300012211\|Ga0137377_10672689	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300012349\|Ga0137387_10644294	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300012349\|Ga0137387_10830180	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300012350\|Ga0137372_10875877	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300012354\|Ga0137366_10150128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1754	Open in IMG/M
3300012355\|Ga0137369_10142765	All Organisms → cellular organisms → Bacteria	1910	Open in IMG/M
3300012501\|Ga0157351_1023252	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	673	Open in IMG/M
3300012923\|Ga0137359_10412391	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1197	Open in IMG/M
3300012923\|Ga0137359_10752041	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	847	Open in IMG/M
3300012927\|Ga0137416_10928234	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300012927\|Ga0137416_11537686	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	605	Open in IMG/M
3300012929\|Ga0137404_10296803	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300012930\|Ga0137407_10312484	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium RIFCSPLOWO2_12_FULL_56_21	1439	Open in IMG/M
3300012944\|Ga0137410_10879688	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300012961\|Ga0164302_10536173	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	834	Open in IMG/M
3300012977\|Ga0134087_10116610	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1133	Open in IMG/M
3300013308\|Ga0157375_11261408	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	868	Open in IMG/M
3300013308\|Ga0157375_11916179	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300014255\|Ga0075320_1126764	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	524	Open in IMG/M
3300014263\|Ga0075324_1043993	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300015258\|Ga0180093_1009160	All Organisms → cellular organisms → Bacteria	1889	Open in IMG/M
3300015372\|Ga0132256_102551261	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	612	Open in IMG/M
3300015373\|Ga0132257_100661955	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1295	Open in IMG/M
3300018053\|Ga0184626_10114629	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1144	Open in IMG/M
3300018053\|Ga0184626_10440432	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300018074\|Ga0184640_10008798	All Organisms → cellular organisms → Bacteria	3545	Open in IMG/M
3300018074\|Ga0184640_10345043	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300018077\|Ga0184633_10012317	All Organisms → cellular organisms → Bacteria	4105	Open in IMG/M
3300018081\|Ga0184625_10004964	All Organisms → cellular organisms → Bacteria	5902	Open in IMG/M
3300018084\|Ga0184629_10106539	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300018422\|Ga0190265_11480761	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	792	Open in IMG/M
3300019889\|Ga0193743_1017430	All Organisms → cellular organisms → Bacteria	3805	Open in IMG/M
3300020018\|Ga0193721_1065215	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300020018\|Ga0193721_1138779	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	597	Open in IMG/M
3300021073\|Ga0210378_10248696	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300021080\|Ga0210382_10527264	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300021432\|Ga0210384_11711304	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	534	Open in IMG/M
3300025791\|Ga0210115_1122464	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300025936\|Ga0207670_10153918	All Organisms → cellular organisms → Bacteria	1709	Open in IMG/M
3300025961\|Ga0207712_11788124	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	551	Open in IMG/M
3300026025\|Ga0208778_1003995	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1345	Open in IMG/M
3300026324\|Ga0209470_1376527	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	507	Open in IMG/M
3300027513\|Ga0208685_1003938	All Organisms → cellular organisms → Bacteria	4269	Open in IMG/M
3300027617\|Ga0210002_1017024	Not Available	1154	Open in IMG/M
3300027876\|Ga0209974_10131349	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	893	Open in IMG/M
3300030619\|Ga0268386_10556830	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	774	Open in IMG/M
3300031720\|Ga0307469_11311433	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300031720\|Ga0307469_12164721	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	541	Open in IMG/M
3300031820\|Ga0307473_10324822	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	979	Open in IMG/M
3300031847\|Ga0310907_10896537	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300031944\|Ga0310884_10793372	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	579	Open in IMG/M
3300032013\|Ga0310906_10730571	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300032174\|Ga0307470_10833571	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300032179\|Ga0310889_10613717	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	562	Open in IMG/M
3300032180\|Ga0307471_100727931	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1157	Open in IMG/M
3300032180\|Ga0307471_101599945	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	808	Open in IMG/M
3300032205\|Ga0307472_100202867	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1510	Open in IMG/M
3300034115\|Ga0364945_0035090	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1364	Open in IMG/M
3300034150\|Ga0364933_009876	All Organisms → cellular organisms → Bacteria	2194	Open in IMG/M
3300034176\|Ga0364931_0034065	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1501	Open in IMG/M
3300034354\|Ga0364943_0046379	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.94%
Host-Associated	Host-Associated	14.06%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.97%
Aquatic	Environmental → Aquatic	17.97%
Plants	Host-Associated → Plants	14.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.94%
Sediment	Environmental → Aquatic → Sediment	10.16%
Freshwater	Environmental → Aquatic → Freshwater	3.91%
Marine	Environmental → Aquatic → Marine	3.91%
Floodplain	Environmental → Terrestrial → Floodplain	3.12%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.12%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.88%
Loam	Environmental → Terrestrial → Soil → Loam	11.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.16%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.25%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.91%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.91%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	3.12%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.16%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.03%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.25%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.91%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.91%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.12%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	3.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.03%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.25%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.47%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.47%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.69%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.91%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	3.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.12%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	3.12%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.34%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.34%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.34%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.56%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.56%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005873	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301	Environmental	Open in IMG/M
3300005875	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101	Environmental	Open in IMG/M
3300005883	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_302	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014255	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2	Environmental	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025791	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026025	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_08476390	2124908045	Soil	MLSPILWDADRDEVMRTNGRGLAIAVLLIVLLGAHAPSALAAQAKPLIKVVVGYGSTDGGVAVLGFAKETKLFEKHGLDVVLVGMGTGSVS
JGI11643J11755_117085432	3300000787	Soil	MRANGGTNLVITAIITVFYSLPGPTALPAQVKPLVKVVVGYGSTDGGVAILGFAKETKLFEKRGLD
AP72_2010_repI_A100DRAFT_10125764	3300000837	Forest Soil	VIAGLVMIFLGAHAANALAAQAKPLTKIVVGYGSTDGTIAILGFAKETKLFEKYGLDVVLVGMGTGSV
JGI10214J12806_102550892	3300000891	Soil	MRANGGTNLVITAIITVFYSLPGPTALPAQVKPLVKVVVGYGSTDGGVAILGFAKETKLFEKRGLDVVLVGMGTGSVSL
JGI10216J12902_1076649851	3300000956	Soil	MRTTSRSLLIAALVIVFQSAHAARALAAQAKPLVKVVAGYGSTDGAVAPLWFAKETKLFEKRGLDVLLVGMG
JGI10216J12902_1137455462	3300000956	Soil	MLGCCPDRDDVTRTIGRGLLNAALLIVFLCAHAPSALAAQTKPLTKVVSGYGSSEGGVAVLWFAKETKLFEKRGLDVLLVGMGAGSVSLRALIAHD
Ga0055471_101910331	3300003987	Natural And Restored Wetlands	MRSHRSIHLLIAGVIAVCLALHAPSILAAQAKPLVKVLAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGSVSLRALIANDLEIASLSASG
Ga0055465_103722671	3300004013	Natural And Restored Wetlands	MRNHASIHLFLGGMIAVFFDVHAPTMLAAQAKPLVKVIAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGAVSLRALIANDLEIASLS
Ga0055490_100268571	3300004052	Natural And Restored Wetlands	MGHSGSIHLLIAAIIAIFLDVGAPSMLAAQAKPLIKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGS
Ga0055489_102450012	3300004145	Natural And Restored Wetlands	MLASTRGKVMRKSGRSLVIAALVVFLCVHAPSALAAQAKPLIKVMAGYGSTDGGAQVLWFAKETKLFEKRGLDVVLVGMGTGSVSLR
Ga0066396_101121401	3300004267	Tropical Forest Soil	MRTNGSICLFVAAVIVGFFAAHAPTALAAESKLPIKVVAGYGSADGAVAPLWFAKETKLFEKRNLDVLLVGMGTGSVSLRALIAKDLEIASLS
Ga0063356_1005905001	3300004463	Arabidopsis Thaliana Rhizosphere	MRNDRNIHLFIGGIITVVLYVYAPTLLAGKAAVKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTG
Ga0066683_102903872	3300005172	Soil	MRTNGRSLVIAALLIVFLGAHAPSALAAQAKPLIKVVVGYGSTDGGVAVLGFDKETKLFEKRGLDVVLVGMGTGS
Ga0066688_103927311	3300005178	Soil	MRNHGSIHPFIAGMITVFLGFHAPSMLCAQAKPLIKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGM
Ga0065705_100604961	3300005294	Switchgrass Rhizosphere	MPTDGRSLVIAALVIVFLGAHAPSALAVQAKPLIKVVVGYGSTDGGVAVLGFAKETKLFEKRGLDVVLVGMGTGSVSLRALIAKDLEISSLSGSGLVQAALQGADT
Ga0065705_103686412	3300005294	Switchgrass Rhizosphere	MRINSSISLLITAIVTVFLDGQAPTALAAQAKPLIKIVAGYGSTDGAVAPLWFAKETKLFEKRGLDVVLVGMGTGSVSLRALIAKDLEIASLSGSGLVQ
Ga0066388_1084104371	3300005332	Tropical Forest Soil	MVAALATIFLATHTLSALAAQVKPLTKLVIGYGSTDGTIAVLGFAKETKLFEKHGLDVLLVGMGTGSV
Ga0070689_1000944562	3300005340	Switchgrass Rhizosphere	MRINGRSLVIAALVLIFLGAHAASALAAQAKPLIKIVVGYGSTDGGVAILGFAKDTKLFEKHGL
Ga0070709_109822491	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKTNGSISLLIAVVIAGFLVVHATPALAAQAKTLTKVVAGYGSADGAIAPLWFAKETKLFEKRGLDVLLIGMGTGSVSL
Ga0070709_110975751	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRPFVRSLAIAALVIVFLSAHVATTLAAQAKPLTKLVVGYGSTDGTIAVLGFAKETKLFEKYGLDVV
Ga0070708_1019444641	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRTTSRSLLIAALVIVFLSAHAARALAAQAKPLVKVVAGYGSTDGAVAPLWFAKETKLFEKHGLDVELVGMGTGSVSLR
Ga0070706_1001274003	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKTNGSISLLIAVVIAGFLVVHATPALAAQAKTLIKVVAGYGSADGAVAPLWFARETKLFEKRGLDVLLIGMGTGSVSLRALIAKDLEIASVSGSGLVQAALQGAD
Ga0070706_1001773431	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRPFVRSLVIAALVIVFLSAHVATTLAAQAKPLTKLVVGYGSTDGTIAVLGFAKETKLFEKYGLDVVLVGMG
Ga0070699_1008033382	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRINGRSIVIAALVIVFLCAHIRSALAAQAKPLIKVVVGYGSTDGGVAVLGFAKETKLFEKHGLDVVLVGMGTGS
Ga0070697_1003952833	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VRINGRGLPIAALVIVFLGTHAASALAAQAKPLIKVVVGYGSTDGGVAVLGFAKETKLFEKHGLDVVLVGMGTGSVSLRALIA
Ga0066694_104460371	3300005574	Soil	MRNHGSIHRFIAGMITVFLGFHAPSMLCAQAKPLIKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGSVSLRALIANDLEIASLSGSGLVQAALQGAD
Ga0066905_1013451812	3300005713	Tropical Forest Soil	MRTNGRSLLIAALVIAFLCAHAPRASAAQPKPLTKVVIGYGSTDGTIAVLGFAKETKLFEKHGLDVLLVG
Ga0066903_1035976451	3300005764	Tropical Forest Soil	MRTDGRSLLIWALVIVFLCAHAPGAWTAQTKPLTKVVVGYGSTDGGVAILGFAKETKLFEKYGLDVVLV
Ga0066903_1043652881	3300005764	Tropical Forest Soil	MRTNGRSLLVAALVIGFLCAHAPRAWTAQAKPLTKVVIGYGSTDGTIAVLGFAKETKLFEKHGLDVLLVGMGTGS
Ga0075287_10091051	3300005873	Rice Paddy Soil	MRSHRSIHLLIAGVIAVCLALHAPSMLAAQAKPLIKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRL
Ga0075293_10193031	3300005875	Rice Paddy Soil	MRSHRSIHLLIAGVIAVCLALHAPSILAAQAKPLVKVLAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMG
Ga0075299_10072302	3300005883	Rice Paddy Soil	MRSHRSIHLLIAGVIAVSLALHAPSMLAAQAKPLIKVLAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGSVSLRALIANDLEIASLSASGLVQAALQGAD
Ga0075289_10758592	3300005888	Rice Paddy Soil	MRSHRSIHLLIAGVIAVCLALHAPSILAAQAKPLVKVLAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGSVSLRALIANDLEIASLSASGLVQ
Ga0070716_1005887192	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKTNGSIGLLIAVAIAGFLVVHATPALAAQSKTLTKVVAGYGSADGAIAPLWFAKETKLFEKRGLDVLLIGMGTGSVSLRALIAKDLEIASVSGSGLVQAALQGAD
Ga0075431_1000544181	3300006847	Populus Rhizosphere	MRANGGTNLVITAIITVFYSLPGPTALPAQVKPLVKVVVGYGSTDGGVAILGFAKETKLFEKRGLDVVLVGMGTGSV
Ga0075420_1017200131	3300006853	Populus Rhizosphere	MRANGGTNLVITAIITVFYSLPGPTALPAQVKPLVKVVVGYGSTDGGVAILGFAKETKLFEKRGLDVVLVGMGTGSVSLRALIAKDLQIASLSGSGLVQAA
Ga0075424_1002943004	3300006904	Populus Rhizosphere	MRPFVRSLVIAALVIVFLGAHIATTLAAQAKPLTKLVVGYGSTDGTIAVLGFAKETKLFEKHGLDVVLVGMG
Ga0075435_1003054761	3300007076	Populus Rhizosphere	MRTRGGIGLFIVALISVFLNVHTGTAVAAQAKPLIKVVAGYGSADGAVAPLWFAKEAKLFEKHGLDVLLVGMGTGSVSLRALI
Ga0066710_1000733641	3300009012	Grasslands Soil	MRINGRSLVIAALVIVFLSAHAPTMLAAQAKPLIKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVR
Ga0099828_105402042	3300009089	Vadose Zone Soil	MRINGRSIVIAALVIVFLCAHIRSALAAQAKPLIKIVVGYGSTDGGVAVLGFAKETKLFEKRGLDVVLVGMGTGSVSLRTLIAKDLRGR*
Ga0075418_122710971	3300009100	Populus Rhizosphere	MRNHSSIRLFIVGIIAVVLDVCAPSMLAAQAKPLIKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMG
Ga0075418_123175732	3300009100	Populus Rhizosphere	MLSPILWDADRDEVMRTNGRGLAIAVLLIVLLGAHASSALAAQAKPLIRVVVGYGSTDGGVAVLGFAKETKLFEKRGLDVVLVGMGTGSVSLRALIAKDLEISSLSGSGLVQAAL
Ga0114129_113154432	3300009147	Populus Rhizosphere	MRINSSISLLITAIVTVFLDGQAPTALAAQAKPLIKIVAGYGSTDGAVAPLWFAKETKLFEKRGLDVVLVGMGTGSVSLRALIAKDLEIASLSGSGLVQAALQGAD
Ga0114129_122428561	3300009147	Populus Rhizosphere	MRINAPSLLIVVLVIGFLSAHAPSALAAQTKPLTKVVSGYGSSEGGVAVLWFAKETKLFEKRGLDVLLVGMGAGSVSLRALIAHDLEIASLSGSGL
Ga0105092_100503681	3300009157	Freshwater Sediment	MRLLVTAVIAGFFAAHAPTALAAEAKPPIKVVAGYGSADGAVAPLWFAKETKLFEKRGLDVVLVGMGTGSVSLRALIARDLEIASLSGS
Ga0075423_124505212	3300009162	Populus Rhizosphere	MSTNGRISLLVTAIIAGFFIVHAPTELAAQAKPLIKVVAGYGSADGAVAPLWFAKETKLFEKRNLDVLLVGMGTGSVSLRALIAKDLE
Ga0105104_106045882	3300009168	Freshwater Sediment	MRIKSSIGLLITAIIAHFLDVDAPAALAAQAKPLIKVVAGYGSTDGAIAPLWFAKESKLFEKRGLDVRLVGMGTGSVSLRALIAGDLEIASLS
Ga0105101_104566151	3300009171	Freshwater Sediment	LLLVALAVVFLWAQTPGALAGQAKPLVKVVIGYGSTDGCVAVLGFAKETKLFEKHGLDVVLVG
Ga0105242_109549441	3300009176	Miscanthus Rhizosphere	MIMRTNSRSLWIAALITVFFSAHVPTELAAQAKPLIKVMSGYGSTDGGAQILWYAKETKLFEKHGLDVVLVGMGTGSVSLRALIAK
Ga0105340_14287601	3300009610	Soil	MRTNGRIGLLIAVIITVFLDVHAPIALAAQAKPLIKVMAGYGSADGAVAPLWFAKETKLFEKRGLDVVLVGM
Ga0105252_105617071	3300009678	Soil	MRANGSTHLVITAIITVFSSFHVSTALAAQAKPLIKVMSGYGSTDGGVAILGFAKETKLFEKRGLDVVLVGMGTGSV
Ga0126380_104551942	3300010043	Tropical Forest Soil	MRTNGPGLLIAVIIIVFLCAHAPRAWTAQAKPLTKVVIGYGSTDGTIAVLGFAKETKLFEKHGLDVLLVGMGTGSVS
Ga0126384_115283882	3300010046	Tropical Forest Soil	MRTNGRSLLIAALVIAFLCAHAPRASAAQPKPLTKVVIGYGSTDGTIAALGFAKETKLFEKHGLDVLLVGMGTGSVSLRALIA
Ga0126382_100842113	3300010047	Tropical Forest Soil	MRTDGRSLLIWALVIVFLCAHAPGAWTAQTKPLTKVVVGYGSTDGGVAILGFGKETKLFEKHGL
Ga0126382_116568881	3300010047	Tropical Forest Soil	MRTNGRSLLIAALVIVFLSAHASSTLAAQAKPLTKVVVGYGSSDGGVAILGFAKENKLFEKRGLDVVL
Ga0126372_105033311	3300010360	Tropical Forest Soil	MRTNGPGLLIAVIIIVFLCAHAPRAWTAQAKPLTKVVIGYGSTDGTIAVLGFAKETKLFEKHGLDVLLVGMGTGS
Ga0126377_132646951	3300010362	Tropical Forest Soil	MRTNARCLLIAALVIAFLSAHASSTLAAQAAPLTKVVVGYGSTDGGVAVLGFAKETKLFEKHGLD
Ga0134124_108814821	3300010397	Terrestrial Soil	MRNHRSIHLFIVAIIVGLLDLHAPSMLAAQAKPLVKVVAGYGSTDGAIAPLWFAKETKLFEKHGLDVELVGMGTGSV
Ga0137393_110127462	3300011271	Vadose Zone Soil	MRINGSINLLITAIVAVFFDVHAPTQVAAQAKPLIKVVAGYGSADGAVAPLWFAKETKLFEKHGLDVLLVGMGTGSVSL
Ga0137428_11960562	3300011432	Soil	MRLNASISLLIAAIVTLFIDVHAPSALAAQAKPLIKVMAGYGSADGAVAPLWFAKETKLFEKRGLDVVLVGMGTGSVSLRALIAKDLKISSLSGSDEES*
Ga0137432_10517732	3300011439	Soil	MLSPTFWDDDRHELIRTNGRSLVIAALVIVFLCAHAPSALAAQAKPLIKVMAGYGSTDGGAQVLWFAKETKLFEKRGLDVVLVGMGTGSVSL
Ga0137388_115877561	3300012189	Vadose Zone Soil	MRINGRSIVIAALVIVFLCAHIRSALAAQAKPLIKVVVGYGSTDGGVAVLGFAKETKLFEKRGLDVVLVGMGTGSVSLRALIAKDLRGR*
Ga0137382_101178733	3300012200	Vadose Zone Soil	MRNHGSIRPFIAGMIAVVLAVHAPSMLAAQAKPLVKLVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGSVSLRGLIANDL
Ga0137374_102455755	3300012204	Vadose Zone Soil	MRTTSRSLLIAALVIVFQSAHAARALAAQSKPLVKVVAGYGSTDGAVAPLWFAKETKLFEKRGLDVVLVG
Ga0137381_108604542	3300012207	Vadose Zone Soil	MRTTSRSLLIAALVIVFLSTHVARALAAQAKPLVKVVAGYGSTDGAVAPLWFAKETKLFEKHGLDVVLVGMGTGSVSLRAL
Ga0137376_101373533	3300012208	Vadose Zone Soil	MLSPILWDADRDEVMRTNGRGLVIAVLLIVFLGAHAPSALTAQAKPLVKVVVGYGSTDGGVAVLGFAKETRLFEKRGLDVMLVG
Ga0137377_106726891	3300012211	Vadose Zone Soil	MLSPILWDADRDEVMRTNGRGLVIAVLLIVFLGAHAPSALAAQAKPLIKVVVGYGSTDGGVAVLGFAKETKLFEKRGLDVVLVGMGTGSVSLRALIAKDLEIASLSGSGLVQAALQGADT
Ga0137387_106442942	3300012349	Vadose Zone Soil	MRTTSRSLLIAALVIVFLSAHAARALAAQAKPLVKVVAGYGSTDGAVAPLWFAKETKLFEKRGLDVVLVGMGTGSVSLRALIAKDLEIASLSGSGLVQ
Ga0137387_108301801	3300012349	Vadose Zone Soil	MIATLVAICFGAHDASSFAAQAKPLTKVVVGYGSTDGGVAVLGFAKDTKLFEKRGLDVELVGMGTGSVSLRALIAKDL
Ga0137372_108758772	3300012350	Vadose Zone Soil	MLSPTLWDADRDEVMRTNGRSLVIAVLLIVFLGAHAPSALAAQAKPLIKVVVGYGSTDGGVAVLGFAKETKLFEKRGLDVVLVGMGTGSVSLRALIAKDLEISSLSGSGLVQAALQGADT
Ga0137366_101501281	3300012354	Vadose Zone Soil	MRTKGRSLLIAALVIVLLSAQAPSALAAQAKPLIKVMSGYGSTDGGAAISWFAKETKLFEKHGLDVVLVGM
Ga0137369_101427651	3300012355	Vadose Zone Soil	TANFLGRCPDGGRVMRNHGGIHLLIAGMIAVFVDGYAPTMLAAQAKPLVKVVAGYGSTDGAVAPLWFAKETKLFEKR*
Ga0157351_10232522	3300012501	Unplanted Soil	MRNHGSIRPFIVGIIAVVLDVCAPRMLAAQAKPLIKVVAGYGSTDGAIAPLWFAKETKLFEKRCLDERLVGMGT
Ga0137359_104123912	3300012923	Vadose Zone Soil	MIATLVAICFGVHDASSFAAQAKPLIKVVVGYGSTDGGVAVLGFAKDTKLFEKRGLDVELVGMGTGSVSLRALIAKAGVTLEEFLDALSN*
Ga0137359_107520412	3300012923	Vadose Zone Soil	MRNHGGIFLFIAGMIAVVLAVHAPSMLAAQAKPLIKVVVGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGSVSLRALIANDLEIASLSGSGL
Ga0137416_109282342	3300012927	Vadose Zone Soil	MIATLVAICFGAHDASSFAAQAKPLTKVVVGYGSTDGGVAVLGFAKDTKLFEKRGLDVELVGM
Ga0137416_115376861	3300012927	Vadose Zone Soil	MRKHGIIHLFIAGMIAVFLDAHAPTMLAAQAKALSKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDIRLVGMGTGSV
Ga0137404_102968031	3300012929	Vadose Zone Soil	MRTTSRSLLIAALVIVFLSAHAARALAAQAKPLIKVVAGYGSTDGAVAPLWFAKETKLFEKHGLDVVLVGMGTGSVSLRA
Ga0137407_103124841	3300012930	Vadose Zone Soil	MLSPTLWNTDRGGVMRINGRSLVIAVLVIVFLGAHAVSALAAQNKPLSKLVVGYGSTDGGVAVLGFAKETKLFEKYGLDVVLVGMGTGSVSLRALIA
Ga0137410_108796881	3300012944	Vadose Zone Soil	MIATLVAICFGAHDASSFAAQAKPLIKVVVGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGM
Ga0164302_105361732	3300012961	Soil	MRNHGIHLFIAAMIAASLDFYAPGMLAAQAKPLVKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVLLVGMGTGSV
Ga0134087_101166101	3300012977	Grasslands Soil	MRNHGSIHRFIAGMITVFLGFHAPGMLCAQAKPLIKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGSVSLRALIANDLEIASLSGSGLVQAAL
Ga0157375_112614082	3300013308	Miscanthus Rhizosphere	MRNHGGILLFIAGMIVVVLAVHAPSMLAAQAKPLIKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGSVSLRALIANDLEIASLSGSG
Ga0157375_119161792	3300013308	Miscanthus Rhizosphere	MIMRTNSRSLWIAALITVFFSAHVPTELAAQAKPLIKVMSGYGSTDGGAQILWYAKETKLFEKHGL
Ga0075320_11267641	3300014255	Natural And Restored Wetlands	MMASGSISVLLTVILTVFLDVHAPTALAAQAKPLIKVVAGYGSADGAVAPLWFAKETKLFEKRGLDVQLVGMGTGAVSL
Ga0075324_10439932	3300014263	Natural And Restored Wetlands	MRKHPNIHLFLVGTIAVFLQVRDPSTTEAQTKPLTKVVVGYGSTDGGVAVLGFAKETKLFEKHRLDVVLVGMGTGSVSLRALIAKDLQ
Ga0075327_13452481	3300014272	Natural And Restored Wetlands	MCTNSRNLVIAAFLVFLCAPVPCALAAQAKPLIKVMTGYGSTDGGAQVLWFAKETKLFEKRGLDVVL
Ga0180093_10091601	3300015258	Soil	MSNHRSINLFIAGMITVFLDVHDPTALAAQAKPLIKVVAGYGSTDGAIAPLWFAKETRLFEKRGLDVRLVGMGTGAVSLRALI
Ga0132256_1025512611	3300015372	Arabidopsis Rhizosphere	MRNHGSIRLFIAGIIAVVLAVHAPSMLAAQAKPLIKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGM
Ga0132257_1006619553	3300015373	Arabidopsis Rhizosphere	MSTNRRVGLLVTAIIGGFLTAHASTALAAEAKPPIKVVAGYGSADGAVAPLWFAKETKLFEKRGLDVRLVGMGTGSVSLRALIA
Ga0184626_101146292	3300018053	Groundwater Sediment	MRNHRSINLFIAGMIAVFLDVHAPTALAAEAKPLIKVVAGYGSADGAVAPLWFAKETKLFEKRNLDVLLVGMGTGSVSLRALIAKDLEIASL
Ga0184626_104404322	3300018053	Groundwater Sediment	MRINGSINLLITAIITIFFDVHAPTELAAEAKPLIKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGSVSLRALIAKDLEIASLSGSGLVQAA
Ga0184640_100087981	3300018074	Groundwater Sediment	MRTNGRISLLFAAIITVFFDVHAPIALAAQAKPLIKVMAGYRSADGAVAPLWFAKETKLFEKRGLDVVLVGMGTGSVSLRALIAKDLEIASLSG
Ga0184640_103450431	3300018074	Groundwater Sediment	MRTNGRGLVIAVLLIVFLGAHAPSALAAQAKPLIKVVVGYGSTDGGVAVLGFAKETKLFEKRGLDVVLVGMGTGSVSLRALIAKDL
Ga0184633_100123177	3300018077	Groundwater Sediment	MRINGSINLLITAIITVFFAVHAPTELVAQAKPLIKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVVLVGMGTGSVSLRALIAK
Ga0184625_100049641	3300018081	Groundwater Sediment	MRLNDSISLLLVAIVTLFIDVHAPIAFAAQAKPLIKVMAGYGSADGAVAPLWFAKETKLFEKRGLDVVLVGMGTGSVSLRALIAKDL
Ga0184629_101065392	3300018084	Groundwater Sediment	MRTNGRISLLLAAIITVFLDVHAPIALAAQAKPLIKVMAGYGSADGAVAPLWFAKETKLFEKRGLDVVLVGMGTGSVSLRALI
Ga0190265_114807612	3300018422	Soil	MRNHGSIHLFIAGMITVFLDVHAPGMLAAQAKPLIKIVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGAVSLRALIANDLEIASLSGSGLVQAALQGA
Ga0193743_10174301	3300019889	Soil	MRINGRSFVIAALVIIFLGAHAASALAAQAKPLTKVVVGYGSTDGGVAILGFAKDTKLFEKHGLDVVLVGMG
Ga0193721_10652151	3300020018	Soil	MIATLVAICFGAHDASSFAAQAKPLIKVVVGYGSTDGGVAVLGFAKDTKLFEKHGLDVELVGMGTGSVSLR
Ga0193721_11387791	3300020018	Soil	MRNHGSIHLVITGMTAVVLAVHAPSMLAAQAKPLVKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGSVSLRALIANDLEIASLSGSGLV
Ga0210378_102486962	3300021073	Groundwater Sediment	MRTNGRSLLIAALIIVFLGAHAPSALAAQAKPLIKVVAGYGSTDGAVAPLWFAKETKLFEKRGLDVVLVGMGTGSVS
Ga0210382_105272641	3300021080	Groundwater Sediment	MRINGRSLVIAALVIIFLGAHGPSALAAQAKPLIKVIAGYGSTDGAVAPLWFAKETKLFEKRGLDVVLVGMGTGSVSLRALIAKDLEIASLSGSGLVQAALQ
Ga0210384_117113041	3300021432	Soil	MKTNGSIGLLIAVAIAGFLVVHATSALAVQAKTLTKVVAGYGSADGAIAPLWFAKETKLFEKRGLDVLLVGMGTGSVSLRALIAKDLEIASVSG
Ga0210115_11224641	3300025791	Natural And Restored Wetlands	MCTNSRNLVIAAFLVFLCAPASCALAAQAKPLIKVMTGYGSTDGGAQVLWFAKETKLFEKRGLDVVLVGMGTGS
Ga0207670_101539181	3300025936	Switchgrass Rhizosphere	MRINGRSLVIAALVLIFLGAHAASALAAQVKPLIKIVVGYGSTDGGVAILGFAKDTKLFEKHGLEVVL
Ga0207712_117881242	3300025961	Switchgrass Rhizosphere	MRNHGSIRLLIVGIIAVVLDVCAPSMLAAQAKPLIKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGSVSLRALIANDLE
Ga0208778_10039951	3300026025	Rice Paddy Soil	MRNHASIHLFLGGMIAVFFDVHAPTMLAAQAKPLVKVIAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGAVSLRALI
Ga0209470_13765272	3300026324	Soil	MRNHGSIHRFIAGMITVFLGFHAPSMLCAQAKPLIKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGSVSL
Ga0208685_10039384	3300027513	Soil	VIAALVIVFLCAHAPSALAAQAKPLIKVMAGYGSTDGGAQVLWFAKETKLFEKRGLDVVLVGMGTGSVSLRALIAKDLEISSLSGSDEES
Ga0210002_10170241	3300027617	Arabidopsis Thaliana Rhizosphere	MRSHRSIHLLIAVCLALHAPSMLAAQAKPLVKVLAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGT
Ga0209974_101313492	3300027876	Arabidopsis Thaliana Rhizosphere	MRRSIHLCIAGMITVFLDVQAPVRLAAQAKPLIKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGAVSLRALIANDLEIASL
Ga0268386_105568302	3300030619	Soil	MRNKGGIHLLIAGMMAVFLAVHAPAMLAAQAKPLVKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGAVSLRALIANDLEIASLS
Ga0307469_113114331	3300031720	Hardwood Forest Soil	MPTDGRSLVIAALVIVFLGAHAPSALAVQAKPLIKVVVGYGSTDGGVAVLGFAKETKLFEKRGLDVVLVGMGTGSVSLRALIAKDLQIASLSGSGLVQ
Ga0307469_121647211	3300031720	Hardwood Forest Soil	MKTNGSISLLIAVVIAGFLVVHATPALAAQAKTLTKVVAGYGSADGAIAPLWFAKETKLFEKRGLDVLLIGMGTGSVSLRALIAKD
Ga0307473_103248221	3300031820	Hardwood Forest Soil	LGRSLDEDGVMSTNGRISLLVTAIIAGFFIVHAPTELAAQAKPLIKVVAGYGSADGAVAPLWFAKETKLFEKRNLDVLLVGMGTGSVSLRALIAKDLEI
Ga0310907_108965372	3300031847	Soil	MRNHSSIRLFIVGIIAVVLDVCAPSMLAAQAKPLIKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGSVSLRALIAKDLEIASLS
Ga0310884_107933722	3300031944	Soil	MRNHSSIRLFIVGIIAVVLDVCAPSMLAAQAKPLIKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGSVSL
Ga0310906_107305712	3300032013	Soil	MRTNGRTLLIVALVIVFLSAYAPSALAAQTKSLIKVVVGYGSTDGGVAVLGFAKETQLFEKHGLDVVLVGMGTGSVSLRAL
Ga0307470_108335712	3300032174	Hardwood Forest Soil	MRTNGRSLVIAVLVIVFLGAHAVSALAAQNKPLSKLVVGYGSTDGGVAVLGFAKETKLFEKRGLDVVLVGMGTGSV
Ga0310889_106137171	3300032179	Soil	MRNHGSIRLFIVGIIAVVLDVCAPRMLAAQAKPLIKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGSVSLRALIANDLEIAS
Ga0307471_1007279312	3300032180	Hardwood Forest Soil	MSANGRISLLVTAIIAGFFIVHAPTELAAQAKPLIKVVAGYGSADGAVAPLWFAKETKLFEKRGLDVLLVGMGTGSVSL
Ga0307471_1015999452	3300032180	Hardwood Forest Soil	MRNHGSIRPFIVGIIAVVLDVCAPRMLAAQAKPLIKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMGTGSVSLRALIANDLEIASLSGSGLV
Ga0307472_1002028673	3300032205	Hardwood Forest Soil	MSINGRISLLVTAIIAGFFIVDAPTELAAQAKPLIKVVAGYGSADGAVAPLWFAKETKLFEKRNLDVLLVGMG
Ga0364945_0035090_1050_1364	3300034115	Sediment	MLSPTLWDTDRGEVMRTNVRSLVIAALAIVFLCAHAPSALAAQAKPLVKVVVGYGSTDGGVAILGFAKETKLFEKRGLDVVLVGMGTGSVSLRALIAKDLEIASL
Ga0364933_009876_3_266	3300034150	Sediment	MRNHRSINLFIAGMIAVFLDVHAPTALAAEAKPLIKVVAGYGSADGAVAPLWFAKETKLFEKRNLDVLLVGMGTGSVSLRALIAKDLE
Ga0364931_0034065_1_219	3300034176	Sediment	MRNHRSINLFIAGMIAVFLDVHAPTALAAEAKPLIKVVAGYGSTDGAIAPLWFAKETKLFEKRGLDVRLVGMG
Ga0364943_0046379_2_313	3300034354	Sediment	MLSPILWDADRGEVIRTNGRSLVIAALVIVFLGAHAPSALAAQAKPLIKVVVGYGSTDGGVAVLGFAKETKLFEKRGLDVVLVGMGTGSVSLRALIAKDLEIAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065040

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences