Metagenome Family F065052

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F065052
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	93 residues
Representative Sequence	LSSGRWAPLWSPLGTIQVRPLGPPLPLGTLPLGNVREAIRAALIAQAREDRYPTWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS
Number of Associated Samples	115
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.56 %
% of genes near scaffold ends (potentially truncated)	92.19 %
% of genes from short scaffolds (< 2000 bps)	93.75 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.219 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.438 % of family members)
Environment Ontology (ENVO)	Unclassified (30.469 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.938 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.06% β-sheet: 8.26% Coil/Unstructured: 58.68%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00990	GGDEF	34.38
PF13649	Methyltransf_25	9.38
PF13185	GAF_2	6.25
PF00164	Ribosom_S12_S23	4.69
PF08242	Methyltransf_12	3.91
PF12847	Methyltransf_18	3.12
PF00005	ABC_tran	3.12
PF01522	Polysacc_deac_1	0.78
PF07883	Cupin_2	0.78
PF00177	Ribosomal_S7	0.78
PF01609	DDE_Tnp_1	0.78
PF13847	Methyltransf_31	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0049	Ribosomal protein S7	Translation, ribosomal structure and biogenesis [J]	0.78
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.78
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.78
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.78
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.78
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.78
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	89.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	89.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	85.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	85.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	85.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %
Unclassified	root	N/A	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0724393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1035767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	698	Open in IMG/M
3300001334\|A2165W6_1253706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1029	Open in IMG/M
3300001686\|C688J18823_10031756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3614	Open in IMG/M
3300002568\|C688J35102_120615156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1246	Open in IMG/M
3300002908\|JGI25382J43887_10514654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300004153\|Ga0063455_100634799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300005176\|Ga0066679_10206167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1254	Open in IMG/M
3300005176\|Ga0066679_10869760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300005177\|Ga0066690_10094001	All Organisms → cellular organisms → Bacteria	1916	Open in IMG/M
3300005179\|Ga0066684_10749073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300005180\|Ga0066685_10277740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1158	Open in IMG/M
3300005184\|Ga0066671_10948425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300005187\|Ga0066675_10171682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1504	Open in IMG/M
3300005332\|Ga0066388_100331102	All Organisms → cellular organisms → Bacteria → Proteobacteria	2169	Open in IMG/M
3300005332\|Ga0066388_101314834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1248	Open in IMG/M
3300005354\|Ga0070675_100091700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2546	Open in IMG/M
3300005455\|Ga0070663_101576159	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300005518\|Ga0070699_101247888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	682	Open in IMG/M
3300005518\|Ga0070699_102219799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300005535\|Ga0070684_102010378	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005552\|Ga0066701_10868954	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005553\|Ga0066695_10438275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	806	Open in IMG/M
3300005554\|Ga0066661_10380370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	864	Open in IMG/M
3300005555\|Ga0066692_10273935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1068	Open in IMG/M
3300005556\|Ga0066707_10271459	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300005557\|Ga0066704_10104223	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300005558\|Ga0066698_10785922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300005561\|Ga0066699_10759120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300005576\|Ga0066708_10877632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300005764\|Ga0066903_105199615	Not Available	689	Open in IMG/M
3300006058\|Ga0075432_10216828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300006173\|Ga0070716_100213160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1292	Open in IMG/M
3300006796\|Ga0066665_11005685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300006797\|Ga0066659_11930948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300006854\|Ga0075425_102787871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300009012\|Ga0066710_103530100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300009012\|Ga0066710_103697251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300009038\|Ga0099829_10839720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300009137\|Ga0066709_102736147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300009147\|Ga0114129_11343836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	884	Open in IMG/M
3300010039\|Ga0126309_10365343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	854	Open in IMG/M
3300010040\|Ga0126308_10638851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300010045\|Ga0126311_10340032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1141	Open in IMG/M
3300010320\|Ga0134109_10189019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300010337\|Ga0134062_10447884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300010362\|Ga0126377_13243839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300010373\|Ga0134128_12803957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300010396\|Ga0134126_11301977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	805	Open in IMG/M
3300010398\|Ga0126383_10335592	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300011270\|Ga0137391_10143145	All Organisms → cellular organisms → Bacteria	2081	Open in IMG/M
3300012011\|Ga0120152_1171126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300012198\|Ga0137364_10079252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2267	Open in IMG/M
3300012198\|Ga0137364_10474390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	940	Open in IMG/M
3300012198\|Ga0137364_10631044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	808	Open in IMG/M
3300012200\|Ga0137382_10455010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	906	Open in IMG/M
3300012206\|Ga0137380_10920812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	750	Open in IMG/M
3300012208\|Ga0137376_11162534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300012209\|Ga0137379_10079318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3158	Open in IMG/M
3300012211\|Ga0137377_10173931	All Organisms → cellular organisms → Bacteria	2067	Open in IMG/M
3300012285\|Ga0137370_10169563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1270	Open in IMG/M
3300012351\|Ga0137386_10868686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300012359\|Ga0137385_11133621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300012363\|Ga0137390_11499188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300012582\|Ga0137358_11058956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300012925\|Ga0137419_10560669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	913	Open in IMG/M
3300012925\|Ga0137419_10663603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	843	Open in IMG/M
3300012948\|Ga0126375_11152806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300012958\|Ga0164299_11614094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300012960\|Ga0164301_10776811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	730	Open in IMG/M
3300012960\|Ga0164301_11165419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300012971\|Ga0126369_10503756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1269	Open in IMG/M
3300012977\|Ga0134087_10575067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300012987\|Ga0164307_10756914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
3300013307\|Ga0157372_10289759	All Organisms → cellular organisms → Bacteria	1904	Open in IMG/M
3300014157\|Ga0134078_10524280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300014166\|Ga0134079_10459060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300014326\|Ga0157380_13180684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300014823\|Ga0120170_1065312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300015241\|Ga0137418_10266527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1445	Open in IMG/M
3300015241\|Ga0137418_10333855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1256	Open in IMG/M
3300015374\|Ga0132255_105167214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300017659\|Ga0134083_10454241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300018431\|Ga0066655_11334627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300018433\|Ga0066667_10892881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300020001\|Ga0193731_1023300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1623	Open in IMG/M
3300020005\|Ga0193697_1003512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3971	Open in IMG/M
3300020006\|Ga0193735_1115947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300021073\|Ga0210378_10154164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	886	Open in IMG/M
3300021078\|Ga0210381_10392038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300021080\|Ga0210382_10516573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300021413\|Ga0193750_1027442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1315	Open in IMG/M
3300021415\|Ga0193694_1004625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1853	Open in IMG/M
3300021418\|Ga0193695_1026366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1236	Open in IMG/M
3300025885\|Ga0207653_10219995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	721	Open in IMG/M
3300025901\|Ga0207688_10441469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	810	Open in IMG/M
3300025905\|Ga0207685_10525916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	626	Open in IMG/M
3300025939\|Ga0207665_10351693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1112	Open in IMG/M
3300025942\|Ga0207689_11204171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300025942\|Ga0207689_11728197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300025981\|Ga0207640_10866886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	787	Open in IMG/M
3300026528\|Ga0209378_1184852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300026538\|Ga0209056_10336279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1006	Open in IMG/M
3300026552\|Ga0209577_10174686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1670	Open in IMG/M
3300027821\|Ga0209811_10214976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300027862\|Ga0209701_10164463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1346	Open in IMG/M
3300027957\|Ga0209857_1083797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300028710\|Ga0307322_10041207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1111	Open in IMG/M
3300028712\|Ga0307285_10015827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1684	Open in IMG/M
3300028715\|Ga0307313_10278499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300028718\|Ga0307307_10048331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1241	Open in IMG/M
3300028720\|Ga0307317_10303595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300028722\|Ga0307319_10278192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300028744\|Ga0307318_10031205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1736	Open in IMG/M
3300028778\|Ga0307288_10023665	All Organisms → cellular organisms → Bacteria	1989	Open in IMG/M
3300028782\|Ga0307306_10137950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300028791\|Ga0307290_10269154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300028793\|Ga0307299_10208044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	736	Open in IMG/M
3300028810\|Ga0307294_10271637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300028810\|Ga0307294_10426635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300028819\|Ga0307296_10155807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1234	Open in IMG/M
3300028819\|Ga0307296_10536676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300028819\|Ga0307296_10762332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300028875\|Ga0307289_10343638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300028878\|Ga0307278_10101979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1290	Open in IMG/M
3300028884\|Ga0307308_10351894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300028885\|Ga0307304_10215245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	826	Open in IMG/M
3300031740\|Ga0307468_100561103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	922	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.62%
Host-Associated	Host-Associated	9.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.28%
Plants	Host-Associated → Plants	9.38%
Aquatic	Environmental → Aquatic	2.34%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.47%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.91%
Freshwater	Environmental → Aquatic → Freshwater	2.34%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.34%
Loam	Environmental → Terrestrial → Soil → Loam	10.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.12%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.34%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.56%
Sand	Environmental → Terrestrial → Soil → Sand	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.12%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.34%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.34%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.34%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.56%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.12%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.34%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.34%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.34%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.34%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.34%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.56%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.78%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300001334	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-65cm)- 6 month illumina	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027957	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_07243932	3300000033	Soil	APPRLMGLASGRWSALWSPLGSVQVRPLGPPVPLGSVPIGDVSQGIRAALAAQAREDRYPTWLTAAQRAAFPQAICWRDQLPELGDVDLTNYMPFLALTS*
AP72_2010_repI_A100DRAFT_10357672	3300000837	Forest Soil	PLGRVQVRPLGPPRTLASLPLGSVRASIRSALIGQAREEYFPVWLTAAQKAAFPEATCWRDQFPELGEVDLTNYLPFLALTQ*
A2165W6_12537062	3300001334	Permafrost	AVWSPLGTVQVRPLGPPLPLGTLSIGNAREAIRAALMAQEREDRYPSWLASAQQAAFPEAICWRDQFPATGEVDLTNYLPFLALSS*
C688J18823_100317565	3300001686	Soil	GRWSPLWSPLGTIQVRPLGPPLPLGTLPLGNVREAIRAALLAQAREDRYPTWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS*
C688J35102_1206151563	3300002568	Soil	HSGYALASTAPPQLMGLASGRWSAVWSPLGTVRVRPLGPPKLLGSLPLGSVRSSIRTALIAQAQEEHFPAWLTAAQKSAFPEALCWRDQFPELGEVDLTNYLPFLALTQ*
JGI25382J43887_105146541	3300002908	Grasslands Soil	AAPPRLMSLSSGRWSAVWSPLGTVQVRPLGPPLPLGTLPLSNAREAIRAALMAQAREDRYPTWLADAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS*
Ga0063455_1006347992	3300004153	Soil	QLMRIAAGRWASVWSPLGTVRVRPLGPPKALSSLPLGSVRTSIRSALIDQAHEEQFPAWLTAAQKAAFPQAICWRDQLPEVGEVDLTNYLPFLALTQ*
Ga0066679_102061671	3300005176	Soil	WSALWSPLGTVRVRPLGPPKPLSSLPLGNVRPAIRSALIDQAREEHFPVWLTAAQKAAFPEAICWRDQFPELGQVDLTNYLPFLALTS*
Ga0066679_108697602	3300005176	Soil	LSSGRWSALWSPLGTVRVRPLGPPLPLGSLPLGNVRLAIRAALMAQAREDHFPSWLTAAQHAAFPEAICWRDQFPQVGEVDLTDYLPFLALTQ*
Ga0066690_100940013	3300005177	Soil	MNLSSGRWSALWSPLGTVRVRPLGPPKPLSSLLLGNVRPAIRSALIDQAREEHFPVWLTAAQKAAFPEAICWRDQFPELGQVDLTNYLPFLALTS*
Ga0066684_107490732	3300005179	Soil	GRWSALWSPLGTIRVRPLGPPRPLSSLSLGTVRPAIRSALVDQAREEHFPVWLTAAQKAAFPEAICWRDQFPELGEVDLTNYLPFLALTQ*
Ga0066685_102777402	3300005180	Soil	ASTAPPQLMNVASGRWSTVWSPLGPVNVRPLGPPQPLATLPLENVRTAIRIALMAQAREDRFPTWLMSAQRTALSEAICWRDQMPELGEVDLTNYLPFLAVTG*
Ga0066671_109484251	3300005184	Soil	LWSPLGTVQVRPLGPPKPLASLPLGTTRQSIRSALIGEAREEHFPAWLTAAQKAAFPQAICWRDQFPEVGEVDLTNYLPFLVLTSSPE*
Ga0066675_101716821	3300005187	Soil	NVATGRWSTVWSPLGPVQVRPLGSPQPLSALPLASVRTAIRSALMAQAREDRFSAWLMSAQRAALSEATCWRDQMPEPSEVDLTNYLPFLALTG*
Ga0066388_1003311024	3300005332	Tropical Forest Soil	SAAPPQLMGLSSGRWASLWSPLGTVQVRPVGPPEPLGSLPIGNVQQAIRAALLAQAREARFPTWLTSAQKSAFPEAICWRDQLPELGEVDLTNYLPFLALTS*
Ga0066388_1013148343	3300005332	Tropical Forest Soil	PQLMGLASGRWASVWSPLGTVKVRPLGPPKTLSSLPLGSVRSSIRSALVEQAREDHFPVWLAAAQKAAFPEAICWRDQFPELGEVDLTNYLPFLALTQ*
Ga0070675_1000917001	3300005354	Miscanthus Rhizosphere	PLGTIQVRPLGPPLPLGTLPLGNVREAIRAALLAQAREDRYPAWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS*
Ga0070663_1015761591	3300005455	Corn Rhizosphere	LSSGRWASLWSPLGTIQVRPLGPPLPLGTLPLGNVREAIRAALLAQAREDRYPAWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS*
Ga0070699_1012478881	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	AVESAAPPKLMTLSSGRWSSLWSPLGTIQVRPLGPPLPLGTLPLGNVREAIRAALLAQAREDRYPAWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS*
Ga0070699_1022197991	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLSGRWTSVWSPLGMVQVRPLGPPLPLGTLPLGNARKAIQAALMAQEREDRYPTWLASAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS*
Ga0070684_1020103781	3300005535	Corn Rhizosphere	SLWSPLGTIQVRPLGPPLPLGTLPLGNVREAIRAALLAQAREDRYPAWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS*
Ga0066701_108689542	3300005552	Soil	AVWSPLGTVQVRPLGPPLPLGTLPLGNAREAIRAALMTQEREDRYPTWLASAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS*
Ga0066695_104382751	3300005553	Soil	VQVRPLGPPLPLGTLPLGNARVAIRAALMAQEREDRYPTWLTSAQQAAFPEAICWRDQMPDQGEVDLTNYLPFLALTS*
Ga0066661_103803702	3300005554	Soil	YALASTAPPQLMNLSSGRWSALWSPLGTVRVRPLGPPKPLSSLPLGNVRPAIRSALIDQAREEHFPVWLTAAQKAAFPEAICWRDQFPELGQVDLTNYLPFLALTS*
Ga0066692_102739352	3300005555	Soil	PLGTVQVRPLGPPLPLGTLTLGNAREAIRAALKAQEREDRYPTWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALSS*
Ga0066707_102714592	3300005556	Soil	TVQVRPLGPPLPLGTLPLGNAREAIRAALMTQEREDRYPTWLASAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS*
Ga0066704_101042231	3300005557	Soil	VRPLGPPQSLATLPLENLRTAIRTALMAQAREDRFPTWLMAAQRNALSEAICWRDQMPELSEVDLTNYLPFLAVTG*
Ga0066698_107859221	3300005558	Soil	VESAAPPRLMTLLSGRRSAVWSPLGTVQVRPLGPPLPLGTLPLGNAREAIRAALMTQEREDRYPTWLASAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS*
Ga0066699_107591201	3300005561	Soil	QLMNVASGRWSTVWSPLGPVHVRPLGPPQPLATLPLANVRTAIRTALMAQAREDRFPTWLMSAQRAALSEAICWRDQMPELSEVDLTNYLPFLAVTG*
Ga0066708_108776321	3300005576	Soil	AGRWASVWSPLGTVRVRPLGPPKALSSLPLGSVRTSIRSALIDQAHEEQFPAWLTAAQKAAFPQAICWRDQLPEVGEVDLTNYLPFLALTQ*
Ga0066903_1051996152	3300005764	Tropical Forest Soil	VRPLGPPKTLSSLPLGSVRSSIRSALVEQAREDHFPVWLAAAQKAAFPEAICWRDQFPELGEVDLTNYLPFLALTQ*
Ga0075432_102168281	3300006058	Populus Rhizosphere	SVWSPLGTVRVRPLGPPKTLSSLPLGSVRTSIRSALIDQAREEHFPAWLTAAQKAAFPQAICWRDQLPELGEVDLTNYLPFLALTQ*
Ga0070716_1002131603	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RPLGPPKTIASLPLGAVRASIRTALIGQAREDHFQVWLTAAQKAAFPEATCWRDQFPELGEVDLTNYLPFLALTQ*
Ga0066665_110056851	3300006796	Soil	RRSGYAIESAAPPRLMSLSSGRWSAVWSPLGTVQVRPLGPPLPLGTLPLSNARAAIRTALMAQAREDRYPTWLADAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS*
Ga0066659_119309482	3300006797	Soil	WSPLGTVRVRPLGPPRPLSSLPLGNVRLSIRSALIDQAREEHFPVWLTAAQKAAFPEAICWRDQFPELGQVDLTNYLPFLALTS*
Ga0075425_1027878712	3300006854	Populus Rhizosphere	GSGRWSPLWSPLGTIQVRPLGPPKTISSLPLGAVRASIRTALIGQAREDHFQVWLTAAQKAAFPEATCWRDQFPELGEVDLTNYLSFLALTQ*
Ga0066710_1035301001	3300009012	Grasslands Soil	VQVRPLGPPLPLGSVPVGNAASGIRAALVAQAREERFPSWLTAAQRRALPEAICWRDQMPVLGEVDLTNYLPFLALSS
Ga0066710_1036972511	3300009012	Grasslands Soil	MNLSSGRWSALWSPLGTVRVRPLGPPQPLGSVPLGNVRPTIRSALMDQAREEHFPVWLTAAQKAAFAEAIGWRDQIPELGEVDLTNYLPFLALTQ
Ga0099829_108397202	3300009038	Vadose Zone Soil	MALSSGRWSAAWSPLGTVQVRPLGPPLPLGTLSLGDARQAIRAALMTQEREDRYPSWLASAQQAAFPEAICWRDQFPETGEVDLTNYLPFLALTS*
Ga0066709_1027361472	3300009137	Grasslands Soil	ESAAPPRLMTLLSGRWSAVWSPLGTVQVRPLGPPLPLGTLPLGNAREAIRAALMTQEREDRYPTWLASAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS*
Ga0114129_113438362	3300009147	Populus Rhizosphere	MNDASGRWSTVWSPLGPVEVRPLAPPQPLGTLPLGSVRAAIRSALMAQAREDRFPEWLMAAQRAALSEAICWRDQMPELSEVDLTNYLPFLAVTG*
Ga0126309_103653432	3300010039	Serpentine Soil	MSLASGRWQRLWSPLGTVQVRPLGPPQRLSAVPLGTASLAIRSALVDEARQDHFPIWLTAAQKAAFPEATCWRDQFPELGEVDLTNYLPFLALTQ*
Ga0126308_106388512	3300010040	Serpentine Soil	SSTAPPQLMNLSTNRWSPLWTPLGTVQVRPLGPPQPLGSVPLGSVRVAIRAALMDQAREERFPVWLTAAQKAAFPQAMCWRDQFPEIGEVDLTNYLPFLALTQ*
Ga0126311_103400322	3300010045	Serpentine Soil	TPLGTVQVRPLGPPQPLGSVPLGSVKVAIRAALMDQAREERFPVWLTAAQKAAFPQAMCWRDQFPEIGEVDLTNYLPFLALTQ*
Ga0134109_101890191	3300010320	Grasslands Soil	VWSPLGPVDVRPLGPPQPLGTLPLQSVRATIRSALMAQEREDRFPVWLMAAQRTALSEAICWRDQMPELSEVDLTNYLPFLALSS*
Ga0134062_104478842	3300010337	Grasslands Soil	GYALSSSAPPQLMGLAAGRWAPLWSPLGVVRVRPLGPPKTLGSLPLGSVRSSIRATLIEQAREAHFPAWLTAAQKSSFPQAICWRDQFPELGEVDLTNYLPFLALTQ*
Ga0126377_132438392	3300010362	Tropical Forest Soil	SVKVRPLGPPMPLGSVPIGDVSQAIRAALAAQAREDRYPTWLTAAQRAAFPIATCWRDQLPQVGEVDLTNYMPFLALTS*
Ga0134128_128039572	3300010373	Terrestrial Soil	AAPPKLMTLSSGRWSSLWSPLGTIQVRPLGPPLPLGTLPLGNVREAIRAALLAQAREDRYPAWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS*
Ga0134126_113019771	3300010396	Terrestrial Soil	AGYAVESAAPPKLMTLSSGRWSSLWSPLGTIQVRPLGPPLPLGTLPLGNVREAIRAALLAQAREDRYPAWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS*
Ga0126383_103355923	3300010398	Tropical Forest Soil	SVWSPLGRVQVRPLGPPKTLASLPLGSVRGSIRSALIGQAREEHFPVWLTAAQKAAFPEATCWRDQFPELGEVDLTNYLPFAALTQ*
Ga0137391_101431451	3300011270	Vadose Zone Soil	GRWTSVWSPLGTVQVRPLGPPLPLGTLPLGNAREAIRAALKAQEREDRYPTWLADAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS*
Ga0120152_11711262	3300012011	Permafrost	GFFQGRPPAPPLPLGTLPLSNAREGIRAALMSQAREDRYPTWLAAAQQAAFPEAICWRDQMPEAGEVDLTNYLPFLALTS*
Ga0137364_100792521	3300012198	Vadose Zone Soil	GRWTSVWSPLGTVQVRPLGPPLPLGTLPLGNAREAIRAALKSQERDDRYPTWLASAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS*
Ga0137364_104743901	3300012198	Vadose Zone Soil	PQLMRIAAGRWASVWSPLGTVRVRPLGPPKTLSSLPLGSVRTSIRSALVDQAREEHFPAWLTAAQKAAFPQAICWRDQLPEVGEVDLTNYLPFLALTQ*
Ga0137364_106310442	3300012198	Vadose Zone Soil	MSIASGRWAAVWSPLGTVRVRPLGPPKTLSSLPLGSVRTSIRSALIDQAREQRFPIWLAAAQKAAFPEAICWRDQFPEIGEVDLTNYLPFLALTQ*
Ga0137382_104550103	3300012200	Vadose Zone Soil	SPLGTVRVRPLGPPKTLSSLPLGSVRTSIRSALVDQAREEHFPAWLTAAQKAAFPQAICWRDQLPEVGEVDLTNYLPFLALTQ*
Ga0137380_109208122	3300012206	Vadose Zone Soil	MSLSSGRWTSVWSPLGMVQVRPLGPPLPLSTLPLGNAREAIRAALMAQEREDHYPAWLASAQRAASPEAICWRDQLPEEGEVDLTNYLPFLALTS*
Ga0137376_111625341	3300012208	Vadose Zone Soil	LGTVRVRPLGPPLPLGSLPLGHVRTAIRAALMEQSREERFPAWLTAAQKGAFPEAICWRDQFPELGEVDLTNYLDFLALTQ*
Ga0137379_100793183	3300012209	Vadose Zone Soil	MNLSSGRWSALWSPLGTVRVRPLGPPQPLGSVPLGNVRPTIRSALMDQARGEHFPVWLTAAQKAAFPEAICWRDQFPELGEVDLTNYLPFLALTQ*
Ga0137377_101739311	3300012211	Vadose Zone Soil	PLGTVQVRPLGPPLPLGTLPLGNAREAIRAALMTQEREDHYPTWLASAQEAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS*
Ga0137370_101695631	3300012285	Vadose Zone Soil	STAPPQLMSIASGRWAAVWSPLGTVRVRPLGPPKTLSSLPLGSVRTSIRSALIDQAREQRFPIWLAAAQKAAFPEAICWRDQFPELGEVDLTNYLPFLALTQ*
Ga0137386_108686861	3300012351	Vadose Zone Soil	MNLPSGRWSALWSPLGTVLVRPLGPPLPLGSVPLGNVRLGIRAALMAQSRGDHFPSWLNASQQAALPKAICWRDQFPQLGEVDLANYLPFLALTQ*
Ga0137385_111336211	3300012359	Vadose Zone Soil	LLSGRWTSVWSPLGMVQVRPLGPPLPLGTLPLGNAREAIRAALMAQEREDRYPTWLASAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALSS*
Ga0137390_114991882	3300012363	Vadose Zone Soil	GTVQVRPLGPPLPLGTLPLGNVREAIRTALVTQAREDRYATWLTSAQEAAFPEAICWRDQMPQPGEVDLTNYLPFLALTS*
Ga0137358_110589562	3300012582	Vadose Zone Soil	MALSSGRWTAVWSPLGTVQVRPLGPPLPLGTLPLGNAREAIRAALMTQEREDRYPTWLTSAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS*
Ga0137419_105606692	3300012925	Vadose Zone Soil	GALWSPLGTVQVRPLGPPLPLGSVPLGNAAAGIRAALVAQAREERFPSWLTAAQRAALPEAICWRDQMPQLGEVDLTNYLPFLALSS*
Ga0137419_106636031	3300012925	Vadose Zone Soil	LMALSSGRWTAVWSSLGTVLVRPLGPPLPLGTLPLGNAREAIRVALMAQEREDRYPTWLASAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALSS*
Ga0126375_111528062	3300012948	Tropical Forest Soil	ASVWSPLGTVKVRPLGPPKTLSSLPLGSVRSSIRSALVEQAREDHFPVWLAAAQKAAFPEAICWRDQFPELGEVDLTNYLPFLALTQ*
Ga0164299_116140941	3300012958	Soil	PKLMTLSSGRWAPLGAPLGTIQVRPLGPPLPLGTLPVQNVREAIRAALMAQAREDRYPTWLASAQQAAFGEAICWRDQMPALGEVDLTNYLPFLALTS*
Ga0164301_107768112	3300012960	Soil	SGYAVESAAPPRLMSLLPGRWSAIWSPLGTVQVRPLGPPLPLGTLPLSNAREAIRAALLAQAREDRYPTWLAAAQQAAFPEAICWRDQLPELGEVDLTNYLPFLALTS*
Ga0164301_111654192	3300012960	Soil	LAPTAPPQLMGLASGRWAAVWSPLGTVQVRPLGPPKTLSSLPLSSVRTSIRSALLEQEREEHFPVWLAAAQKAAFPEAICWRDQFPELGEVDLTNYLPFLALTQ*
Ga0126369_105037563	3300012971	Tropical Forest Soil	RGYALASTAPPQLMRLASGRWASVWSPLGRVQVRPLGPPRTLASLPLGSVRGSIRSALIGQAREEHFPVWLTAAQKAAFPEATCWRDQFPELGEVDLTNYLPFAALTQ*
Ga0134087_105750672	3300012977	Grasslands Soil	RRSGYALASTAPPQLMNLSSGRWSALWSPLGTVRVRPLGPPKPLSSIPLGNVRLSIRSALIEQARAEHFPVWLTAAQKAAFPEAICWRDQFPELGEVDLTNYLPFLALTQ*
Ga0164307_107569141	3300012987	Soil	LMTLSSGRWSSLWSPLGTVQVRPLGPPLPLGTLPLGNVREAIRAALLAQAREDRYPAWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS*
Ga0157372_102897593	3300013307	Corn Rhizosphere	SSGRWASLWSPLGTIQVRPLGPPLPLGTLPLGNVREAIRAALLAQAREDRYPAWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS*
Ga0134078_105242802	3300014157	Grasslands Soil	LGTVRVRPLGPPKTLSSLPLGSVRTSIRSALIDQAREERFPIWLAAAQKAAFPEAICWRDQFPEIGEVDLTNYLPFLALTQ*
Ga0134079_104590601	3300014166	Grasslands Soil	IASGRWAAVWSPLGTVRVRPLGPPKTLSSLPLGSVRTSIRSALIDQAREQRFPIWLAAAQKAAFPEAICWRDQFPEIGEVDLTNYLPFLALTQ*
Ga0157380_131806842	3300014326	Switchgrass Rhizosphere	TAPPQLMSLPSGRWSRLWSPLGTVQVRPLAAPKSLASFPLGTTRLAIRSALIEQAREEHFPAWLTAAQKAAFPEAICWRDQFPELGEVDLTNYLPFLALTQ*
Ga0120170_10653121	3300014823	Permafrost	LGIVQVRPLGPPLPLGTLPLSNAREAIRAALIAQAREDRYPTWLADAQQAAFPEAICWRDQMPETGEVDLTNYLPFLALTS*
Ga0137418_102665273	3300015241	Vadose Zone Soil	YALASVAPPQLMQLSSGRWGALWSPLGTVQVRPLGPPLPLGSVPLGNAAAGIRAALVAQAREERFPSWLTAAQRAALPEAICWRDQMPQLGEVDLTNYLPFLALSS*
Ga0137418_103338552	3300015241	Vadose Zone Soil	LMALSSGRWTAVWSSLGTVLVRPLGPPLPLGTLPLGNAREAIRAALMAQEREDRYPTWLASAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALSS*
Ga0132255_1051672141	3300015374	Arabidopsis Rhizosphere	QLMGLASGRWASVWSPLGRVQVRPLGPPKTLASVPLGSVRGAIRSAVIEQEREDHFAAWLTAAQKAAFPEATCWRDQFPELGEVDLTNYLPFLALTQ*
Ga0134083_104542412	3300017659	Grasslands Soil	VNVRPLGPPQPLATLPLENVRTAIRIALMAQAREDRFPTWLMSAQRTALSEAICWRDQMPELGEVDLTNYLPFLAVTG
Ga0066655_113346271	3300018431	Grasslands Soil	PLGTVQVRPLGPPLPLGSVPVGNAASGIRAALVAQAREERFPSWLTAAQRRALPEAICWRDQMPVLGEVDLTNYLPFLALSS
Ga0066667_108928812	3300018433	Grasslands Soil	RVRPLGPPRPLGSVPLGNVRPTIRSALMDQAREEHFPVWLTAAQKAAFPEAICWRDQFPELGEVDLTNYLPFLALTQ
Ga0193731_10233001	3300020001	Soil	QVRPLGPPLPLGTLPLGNAREAIRAALMTQEREDRYPTWLTSAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS
Ga0193697_10035125	3300020005	Soil	AAPPKLMTLSSGRWAPLWSPLGTIQVRPLGPPLPLGTLPLGNVREAIRAALIAQAREDRYPTWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS
Ga0193735_11159471	3300020006	Soil	SGRWSAVWSPLGTVQVRPLGPPLPLGTLPLGNAREAIRAALMTQEREDRYPTWLTSAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS
Ga0210378_101541642	3300021073	Groundwater Sediment	GRWAAVWSPTGTVRVRPVGPPLPLGSLPLGNVRSSIRTALIAQAREGRFPGWLTTEQLHRFPEAICWRDQFPELGEVDLTNYLPFLSLTA
Ga0210381_103920381	3300021078	Groundwater Sediment	SALWSPLGTVQVRPLGPPQPLGSLPLGNVRASIRTALIEQAREENFPAWLTAAQKAAFPEAICWRDQLPELGEVDLTNYLPFLALTQ
Ga0210382_105165731	3300021080	Groundwater Sediment	TIRVRPVGPPQPLGSLPLGTVRTSIRAALIAQAREDRFPGWLTTEQLRTFPEAICWRDQFPELGEVDLTNYLPFLSLTS
Ga0193750_10274422	3300021413	Soil	PRLMTLTSGRWSAVWSPLGTVQVRPLGPPLPLGTLSIGNAREAIRAALMAQEREDRYPSWLASAQQAAFPEAICWRDQFPATGEVDLTNYLPFLALTS
Ga0193694_10046251	3300021415	Soil	APPKLMTLSSGRWSSLWSPLGTIQVRPLGPPLPLGTLPIGNVREAIRAALLAQAREDRYPAWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS
Ga0193695_10263661	3300021418	Soil	VESAAPPRLMTLLSGRWSAVWSPLGTVQVRPLGPPLPLGTLPLGNAREAIRAALMTQEREDRYPTWLTSAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS
Ga0207653_102199952	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	LGTIQVRPLGPPLPLGTLPLGNVREAIRAALLAQAREDRYPAWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS
Ga0207688_104414692	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	IQVRPLGPPLPLGTLPLGNVREAIRAALLAQAREDRYPAWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS
Ga0207685_105259162	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VESAAPPKLMTLSSGRWASLWSPLGTIQVRPLGPPLPLGTLPLGNVREAIRAALLAQAREDRYPAWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS
Ga0207665_103516931	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	PLGTIQVRPLGPPKTIASLPLGAVRASIRTALIGQAREDHFQVWLTAAQKAAFPEATCWRDQFPELGEVDLTNYLPFLALTQ
Ga0207689_112041712	3300025942	Miscanthus Rhizosphere	PQLMGLSTGRWAAVWSPQGTVRVRPVGPPEPLGSLPITNVGTSIRTALIAQAREDRFPNWLTTEQLRQFSEAICWRDQFPELGEVDLTNYLPFLALTS
Ga0207689_117281972	3300025942	Miscanthus Rhizosphere	TIQVRPLGPPLPLGTLPLGNVREAIRAALLAQAREDRYPAWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS
Ga0207640_108668861	3300025981	Corn Rhizosphere	LMSLPSGRWSRLWSPLGTVQVRPLGAPKSLASFPLGTMRLAIRSALVEQAREEHFPAWLTAAQKAAFPEAICWRDQFPELGEVDLTNYLPFLALTQ
Ga0209378_11848521	3300026528	Soil	GRWTAVWSPLGTVQVRPLGPPLPLGTLPLGNAREAIRAALMAQEREDRYPTWLASAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALSS
Ga0209056_103362792	3300026538	Soil	SSGRWTAIWSPLGTVQVRPLGPPLPLGTLPLGNAREAIRAALMAQEREDRYPTWLASAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALSS
Ga0209577_101746861	3300026552	Soil	WSALWSPLGTVRVRPLGPPKPLSSIPLGNVRLSIRSALIEEARAEHFPVWLTAAQKAAFPEAICWRDQFPELGEVDLTNYLPFLTLTQ
Ga0209811_102149761	3300027821	Surface Soil	APPQLMSLGSGRWSPLWSPLGTIQVRPLGPPKTIASLPLGAVRASIRTALIGQAREDHFQVWLTAAQKAAFPEATCWRDQFPELGEVDLTNYLPFLALTQ
Ga0209701_101644631	3300027862	Vadose Zone Soil	GYAVESAAPPRLMTLLSGRWTSVWSPLGTVQVRPLGPPLPLGTLPLGNAREAIRAALKAQEREDRYPTWLADAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS
Ga0209857_10837972	3300027957	Groundwater Sand	APPQLMGLSSGRWAALWSPLGTVQVRPLGPPMPLGSLSIGNAQQAIRAALIAQAREARFPTWLTAAQKSAFPEAICWRDQLPELGEVDLTNYLPFLALTS
Ga0307322_100412072	3300028710	Soil	SPLGTVQVRPLGPPLPLGTLPIGNARQAIRAALMAQEREDRYPTWLASAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALSS
Ga0307285_100158273	3300028712	Soil	LMTLSSGRWAPLWSPLGTIQVRPLGPPLPLGTLPLGNVREAIRAALIAQAREDRYPTWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS
Ga0307313_102784992	3300028715	Soil	PKLMTLSSGRWAPLWSPLGTIQVRPLGPPLPLGTLPLGNVREAIRAALIAQAREDRYPTWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS
Ga0307307_100483312	3300028718	Soil	MTLSSGRWAPLWSPLGTIQVRPLGPPLPLGTLPLGNVREAIRAALIAQAREDRYPTWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS
Ga0307317_103035951	3300028720	Soil	PQLMNLSSGRWSALWSPLGTVQVRPLGPPQPLGSLPLGNVRASIRTALIEQAREENFPAWLTAAQKAAFPEAICWRDQLPELGEVDLTNYLPFLALTQ
Ga0307319_102781921	3300028722	Soil	APPQLMNLSSGRWSALWSPLGTVQVRPLGPPQPLGSLPLGNVRASIRTALIEQAREEHFPDWLTAAQKAAFPEAICWRDQLPELGEVDLTNYLPFLALTQ
Ga0307318_100312053	3300028744	Soil	GRWSALWSPLGTVQVRPLGPPQPLGSLPLGNVRASIRTALIEQAREEHFPDWLTAAQKAAFPEAICWRDQLPELGEVDLTNYLPFLALTQ
Ga0307288_100236651	3300028778	Soil	LLSGRWTAVWSPLGTVQVRPLGPPLPLGTLPIGNARQAIRAALMAQEREDRYPTWLASAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALSS
Ga0307306_101379501	3300028782	Soil	SSGRWSALWSPLGTVQVRPLGPPQPLGSLPLGNVRASIRTALIEQAREEHFPDWLTAAQKAAFPEAICWRDQLPELGEVDLTNYLPFLALTQ
Ga0307290_102691542	3300028791	Soil	PQLMNLSSGRWSALWSPLGTVQVRPLGPPQPLGSLPLGNVRASIRTALIEQAREEHFPDWLTAAQKAAFPEAICWRDQLPELGEVDLTNYLPFLALTQ
Ga0307299_102080441	3300028793	Soil	TLLAGRWTALWSPLGTVQVRPIGPPLPLSALPLGNVREAIRAALIAQAREDRYPTWLASAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS
Ga0307294_102716372	3300028810	Soil	LSSGRWAPLWSPLGTIQVRPLGPPLPLGTLPLGNVREAIRAALIAQAREDRYPTWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS
Ga0307294_104266352	3300028810	Soil	GTVQVRPLGPPLPLGTLPIGNARQAIRAALMAQEREDRYPTWLASAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALSS
Ga0307296_101558071	3300028819	Soil	GYALASTAPPQLMNLSSGRWSALWSPLGTVQVRPLGPPQPLGSLPLGNVRASIRTALVEQAREEHFPAWLTAAQKAAFPEAICWRDQFPELGEVDLTNYLPFLALTQ
Ga0307296_105366761	3300028819	Soil	RLMTLVAGRWSSVWSPLGTVQVRPLGPPLPLGTLPVGNVREAIRAALIAQAREDRYPTWLASAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS
Ga0307296_107623322	3300028819	Soil	LMSLSSGRWAALWSPLGTVRVRPLGPPLPLGLLPLGNARAAIRAALIAQAQEARFPNWLMAAQKSAMPEAICWRDQLPQLGEVDLTNYLPFLSLTS
Ga0307289_103436381	3300028875	Soil	ASTAPPQLMNLSSGRWSALWSPLGTVQVRPLGPPQPLGSLPLRNVRASIRTALIEQAREENFPAWLTAAQKAAFPEAICWRDQLPELGEVDLTNYLPFLALTQ
Ga0307278_101019791	3300028878	Soil	LWSPLGTVQVRPLGPPQPLGSLPLGNVRASIRTALVEQAREEHFPAWLTAAQKAAFPEAICWRDQFPELGEVDLTNYLPFLALTQ
Ga0307308_103518941	3300028884	Soil	GRWSAVWSPLGTVQVRPLGPPLPLGTLPLGNAREAIRAALMTQEREDRYPTWLTSAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS
Ga0307304_102152452	3300028885	Soil	NLLSGRWTAVWSPLGTVQVRPLGPPLPLGTLPIGNARQAIRAALMAQEREDRYPTWLASAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALSS
Ga0307468_1005611031	3300031740	Hardwood Forest Soil	YAVESAAPPKLMTLSSGRWAPLWSPLGTIQVRPLGPPLPLGTLPLGNVREAIRAALLAQAREDRYPTWLAAAQQAAFPEAICWRDQMPEKGEVDLTNYLPFLALTS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065052

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences