Metagenome / Metatranscriptome Family F065079

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065079
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	64 residues
Representative Sequence	VFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Number of Associated Samples	101
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	11.71 %
% of genes near scaffold ends (potentially truncated)	75.78 %
% of genes from short scaffolds (< 2000 bps)	68.75 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.375 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (14.062 % of family members)
Environment Ontology (ENVO)	Unclassified (26.562 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.719 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 43.96% Coil/Unstructured: 56.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00406	ADK	2.34
PF02627	CMD	1.56
PF03551	PadR	1.56
PF13474	SnoaL_3	1.56
PF01546	Peptidase_M20	1.56
PF13545	HTH_Crp_2	1.56
PF01451	LMWPc	1.56
PF00535	Glycos_transf_2	1.56
PF03544	TonB_C	1.56
PF00239	Resolvase	1.56
PF02687	FtsX	1.56
PF01070	FMN_dh	1.56
PF07617	DUF1579	0.78
PF13564	DoxX_2	0.78
PF05995	CDO_I	0.78
PF00149	Metallophos	0.78
PF13847	Methyltransf_31	0.78
PF03703	bPH_2	0.78
PF08281	Sigma70_r4_2	0.78
PF06764	DUF1223	0.78
PF02423	OCD_Mu_crystall	0.78
PF04542	Sigma70_r2	0.78
PF01738	DLH	0.78
PF01593	Amino_oxidase	0.78
PF03457	HA	0.78
PF00194	Carb_anhydrase	0.78
PF00486	Trans_reg_C	0.78
PF01522	Polysacc_deac_1	0.78
PF13302	Acetyltransf_3	0.78
PF01494	FAD_binding_3	0.78
PF14355	Abi_C	0.78
PF02954	HTH_8	0.78
PF13006	Nterm_IS4	0.78
PF01850	PIN	0.78
PF03965	Penicillinase_R	0.78
PF01381	HTH_3	0.78
PF01261	AP_endonuc_2	0.78
PF09720	Unstab_antitox	0.78
PF01914	MarC	0.78
PF12840	HTH_20	0.78
PF00069	Pkinase	0.78
PF12704	MacB_PCD	0.78
PF00450	Peptidase_S10	0.78
PF08478	POTRA_1	0.78
PF01977	UbiD	0.78
PF07690	MFS_1	0.78
PF13193	AMP-binding_C	0.78
PF00326	Peptidase_S9	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.12
COG0563	Adenylate kinase or related kinase	Nucleotide transport and metabolism [F]	2.34
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	2.34
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	1.56
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	1.56
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.56
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	1.56
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	1.56
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.56
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.56
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.56
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	1.56
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.56
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.78
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.78
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.78
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.78
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.78
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.78
COG1589	Cell division septal protein FtsQ	Cell cycle control, cell division, chromosome partitioning [D]	0.78
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.78
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	0.78
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.78
COG2939	Carboxypeptidase C (cathepsin A)	Amino acid transport and metabolism [E]	0.78
COG3338	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.78
COG3402	Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.78
COG3428	Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.78
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.78
COG4775	Outer membrane protein assembly factor BamA	Cell wall/membrane/envelope biogenesis [M]	0.78
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.78
COG5429	Uncharacterized conserved protein, DUF1223 domain	Function unknown [S]	0.78
COG5553	Predicted metal-dependent enzyme of the double-stranded beta helix superfamily	General function prediction only [R]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.38 %
Unclassified	root	N/A	40.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.38 %
Unclassified	root	N/A	40.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.38 %
Unclassified	root	N/A	40.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.62 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	33.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.62 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.06 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.34 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.34 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.28 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.69 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.34 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.78 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.28 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.69 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.56 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.78 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.78 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.78 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.78 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.28 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1.56 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.78 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	0.78 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.78 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.78 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.28 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1.56 %
Acidicapsa ligni	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	0.78 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.78 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.78 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.78 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001471\|JGI12712J15308_10188301	Not Available	540	Open in IMG/M
3300002245\|JGIcombinedJ26739_100007279	All Organisms → cellular organisms → Bacteria	8727	Open in IMG/M
3300004082\|Ga0062384_100017463	All Organisms → cellular organisms → Bacteria	2960	Open in IMG/M
3300004092\|Ga0062389_102474216	All Organisms → cellular organisms → Bacteria → Acidobacteria	688	Open in IMG/M
3300004120\|Ga0058901_1353446	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300004631\|Ga0058899_11421882	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300004635\|Ga0062388_101466748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	688	Open in IMG/M
3300005537\|Ga0070730_10888986	Not Available	559	Open in IMG/M
3300005538\|Ga0070731_10073735	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2264	Open in IMG/M
3300005610\|Ga0070763_10032061	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2409	Open in IMG/M
3300005610\|Ga0070763_10860644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300005921\|Ga0070766_10006952	All Organisms → cellular organisms → Bacteria → Proteobacteria	5741	Open in IMG/M
3300005921\|Ga0070766_10907178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300006050\|Ga0075028_100134447	Not Available	1293	Open in IMG/M
3300006162\|Ga0075030_100217740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1535	Open in IMG/M
3300006162\|Ga0075030_101554469	Not Available	518	Open in IMG/M
3300006172\|Ga0075018_10170674	Not Available	1015	Open in IMG/M
3300006176\|Ga0070765_100608448	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300006176\|Ga0070765_101863874	Not Available	564	Open in IMG/M
3300006904\|Ga0075424_102316376	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	564	Open in IMG/M
3300009629\|Ga0116119_1139093	Not Available	607	Open in IMG/M
3300009635\|Ga0116117_1209716	Not Available	517	Open in IMG/M
3300009641\|Ga0116120_1027372	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300009650\|Ga0105857_1087783	All Organisms → cellular organisms → Bacteria → Proteobacteria	831	Open in IMG/M
3300009759\|Ga0116101_1078162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300010379\|Ga0136449_101450350	All Organisms → cellular organisms → Bacteria → Acidobacteria	1055	Open in IMG/M
3300010379\|Ga0136449_101964957	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300010379\|Ga0136449_103990474	Not Available	551	Open in IMG/M
3300014164\|Ga0181532_10413085	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300014200\|Ga0181526_11045063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300014201\|Ga0181537_10088629	All Organisms → cellular organisms → Bacteria	2101	Open in IMG/M
3300014489\|Ga0182018_10070958	All Organisms → cellular organisms → Bacteria → Acidobacteria	2082	Open in IMG/M
3300014489\|Ga0182018_10533101	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300014489\|Ga0182018_10565083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300014654\|Ga0181525_10145616	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1299	Open in IMG/M
3300014654\|Ga0181525_10175232	All Organisms → cellular organisms → Bacteria → Acidobacteria	1173	Open in IMG/M
3300014838\|Ga0182030_10001418	All Organisms → cellular organisms → Bacteria	49398	Open in IMG/M
3300017933\|Ga0187801_10303917	Not Available	649	Open in IMG/M
3300017943\|Ga0187819_10021798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3733	Open in IMG/M
3300017961\|Ga0187778_10444287	Not Available	855	Open in IMG/M
3300018030\|Ga0187869_10095105	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300018037\|Ga0187883_10053322	Not Available	2139	Open in IMG/M
3300018037\|Ga0187883_10456622	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	657	Open in IMG/M
3300020579\|Ga0210407_10190144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1593	Open in IMG/M
3300020580\|Ga0210403_10060886	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3024	Open in IMG/M
3300020581\|Ga0210399_10753039	All Organisms → cellular organisms → Bacteria → Acidobacteria	798	Open in IMG/M
3300020581\|Ga0210399_11503345	Not Available	522	Open in IMG/M
3300020582\|Ga0210395_11244030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300020583\|Ga0210401_10995791	Not Available	697	Open in IMG/M
3300021168\|Ga0210406_10358718	Not Available	1175	Open in IMG/M
3300021170\|Ga0210400_11635682	Not Available	508	Open in IMG/M
3300021180\|Ga0210396_10516647	All Organisms → cellular organisms → Bacteria → Acidobacteria	1044	Open in IMG/M
3300021406\|Ga0210386_10786738	All Organisms → cellular organisms → Bacteria → Acidobacteria	818	Open in IMG/M
3300021432\|Ga0210384_11132100	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300021433\|Ga0210391_10134903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1943	Open in IMG/M
3300021433\|Ga0210391_10277710	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300021559\|Ga0210409_11303471	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	602	Open in IMG/M
3300021559\|Ga0210409_11543043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	540	Open in IMG/M
3300022722\|Ga0242657_1004230	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2087	Open in IMG/M
3300022873\|Ga0224550_1004020	All Organisms → cellular organisms → Bacteria → Acidobacteria	2085	Open in IMG/M
3300023250\|Ga0224544_1046265	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300023259\|Ga0224551_1039182	Not Available	822	Open in IMG/M
3300025878\|Ga0209584_10309121	Not Available	608	Open in IMG/M
3300027545\|Ga0209008_1145455	Not Available	522	Open in IMG/M
3300027619\|Ga0209330_1072343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300027635\|Ga0209625_1011851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1899	Open in IMG/M
3300027768\|Ga0209772_10028250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1618	Open in IMG/M
3300027853\|Ga0209274_10087491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1524	Open in IMG/M
3300027855\|Ga0209693_10033008	All Organisms → cellular organisms → Bacteria → Acidobacteria	2530	Open in IMG/M
3300027884\|Ga0209275_10167906	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300027894\|Ga0209068_10003785	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7176	Open in IMG/M
3300027911\|Ga0209698_10224711	All Organisms → cellular organisms → Bacteria	1509	Open in IMG/M
3300028759\|Ga0302224_10125201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	998	Open in IMG/M
3300028766\|Ga0302269_1121957	Not Available	758	Open in IMG/M
3300028788\|Ga0302189_10134691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1080	Open in IMG/M
3300028874\|Ga0302155_10241952	Not Available	782	Open in IMG/M
3300028882\|Ga0302154_10612520	Not Available	512	Open in IMG/M
3300029943\|Ga0311340_10643296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300029943\|Ga0311340_10653619	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300029944\|Ga0311352_10472410	All Organisms → cellular organisms → Bacteria → Acidobacteria	1017	Open in IMG/M
3300029952\|Ga0311346_10574843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300029999\|Ga0311339_10020131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	9969	Open in IMG/M
3300029999\|Ga0311339_10219961	All Organisms → cellular organisms → Bacteria → Acidobacteria	2123	Open in IMG/M
3300030007\|Ga0311338_10528760	All Organisms → cellular organisms → Bacteria → Acidobacteria	1230	Open in IMG/M
3300030058\|Ga0302179_10395397	Not Available	608	Open in IMG/M
3300030399\|Ga0311353_10785989	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300030503\|Ga0311370_10011318	All Organisms → cellular organisms → Bacteria	14083	Open in IMG/M
3300030520\|Ga0311372_12458596	Not Available	587	Open in IMG/M
3300030618\|Ga0311354_11449414	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300030862\|Ga0265753_1025951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	914	Open in IMG/M
3300030916\|Ga0075386_10862173	Not Available	558	Open in IMG/M
3300031233\|Ga0302307_10684081	Not Available	515	Open in IMG/M
3300031234\|Ga0302325_10089755	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5823	Open in IMG/M
3300031234\|Ga0302325_10245471	All Organisms → cellular organisms → Bacteria	2992	Open in IMG/M
3300031234\|Ga0302325_12164554	Not Available	678	Open in IMG/M
3300031524\|Ga0302320_11568793	Not Available	643	Open in IMG/M
3300031708\|Ga0310686_106740979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2588	Open in IMG/M
3300031708\|Ga0310686_109538771	All Organisms → cellular organisms → Bacteria → Acidobacteria	2293	Open in IMG/M
3300031708\|Ga0310686_110368861	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
3300031708\|Ga0310686_113044289	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1635	Open in IMG/M
3300031708\|Ga0310686_113482451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	654	Open in IMG/M
3300031708\|Ga0310686_113492157	Not Available	1761	Open in IMG/M
3300031708\|Ga0310686_117822174	Not Available	668	Open in IMG/M
3300031718\|Ga0307474_10809462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300031753\|Ga0307477_10565298	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300031754\|Ga0307475_11477444	Not Available	522	Open in IMG/M
3300031754\|Ga0307475_11534600	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300031823\|Ga0307478_10236952	Not Available	1479	Open in IMG/M
3300031823\|Ga0307478_10357779	Not Available	1203	Open in IMG/M
3300032893\|Ga0335069_10404842	Not Available	1600	Open in IMG/M
3300034163\|Ga0370515_0378632	Not Available	597	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.22%
Host-Associated	Host-Associated	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.78%
Aquatic	Environmental → Aquatic	23.44%
Plants	Host-Associated → Plants	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.91%
Peat	Environmental → Terrestrial → Peat	21.88%
Freshwater	Environmental → Aquatic → Freshwater	17.97%
Sediment	Environmental → Aquatic → Sediment	5.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	21.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	17.97%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	21.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.72%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.47%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.47%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.91%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.12%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.12%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.06%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	14.06%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.25%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.47%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.47%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.47%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.47%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.91%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.12%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.12%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	3.12%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.34%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.34%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.34%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.34%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.34%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.78%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.78%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300023259	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24	Environmental	Open in IMG/M
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028766	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_101883011	3300001471	Forest Soil	MAGMTVVFRSGKVTVTEGLGGPMEFECWTDGGKIVMYKAGSSTPFSYGFDVNNDGTLQTPLGAIKKMGK*
JGIcombinedJ26739_1000072791	3300002245	Forest Soil	VFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN*
JGI26339J46600_100019598	3300003218	Bog Forest Soil	GLGGPMEFECWTGGGHIVMYKAGSFTPFSYGFDINNDGTLQTPLGVIKKMGN*
Ga0062384_1000174631	3300004082	Bog Forest Soil	VFRSGTATITEGLGGEMPFDCFTGGGKVAFYKPGSFTPFSYDFDINNDGTLATPLGAIKKMGN*
Ga0062389_1024742161	3300004092	Bog Forest Soil	VVFRSGKATITEGLGGEMLFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN*
Ga0058901_13534461	3300004120	Forest Soil	ITEGVSELGPFDCFTGGGKVVFYEAGSFKPFAYDFDINLDGTLQTPLGGIKKMGN*
Ga0058899_114218821	3300004631	Forest Soil	KATITEGVSELGPFDCFTGGGKVVFYEAGSFKPFAYDFDINLDGTLQTPLGGIKKMGN*
Ga0062388_1005594562	3300004635	Bog Forest Soil	MLFDCFTGDGKVVFYKAGSFTPFSYDFDVNNDGTLQTPLGAIKKMGN*
Ga0062388_1014667482	3300004635	Bog Forest Soil	FRSGTATITEGLGGEMPFDCFTGGGKVAFYKPGSFTPFSYDFDINNDGTLATPLGAIKKMGN*
Ga0070730_108889862	3300005537	Surface Soil	MGGMKVVFRSGKATITEGLGGEMLFGCFSGDGTVVFYKAGSFTPFSYDFDINNGGTLQTPLGAIKKMGN*
Ga0070731_100737354	3300005538	Surface Soil	EGRWEHVSGMGGMTVIFRSGKVTVSGGLGGDDHFDCFLGDGKLILYKPGSFTPESFGFDINNDGTLQTPLGAIKKMGN*
Ga0070731_105538283	3300005538	Surface Soil	DCFTGGEKVVFYEAGSFTPFAYDFDINLDGTLQTPLGALKKMGN*
Ga0070763_100320611	3300005610	Soil	GKYEGRWEHVSGMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN*
Ga0070763_108606442	3300005610	Soil	MKVVFRSGKATITEGLGGEMLFDCFTGDGKIAFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN*
Ga0070766_100069521	3300005921	Soil	DFECFTGGGKVAFYKPGSPQSTYEFDINNDGTLQTPLGAIKKVGN*
Ga0070766_109071781	3300005921	Soil	RWEHVSGMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN*
Ga0066787_100820383	3300005950	Soil	EMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN*
Ga0075028_1001344472	3300006050	Watersheds	MGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGK*
Ga0075030_1002177401	3300006162	Watersheds	GMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN*
Ga0075030_1015544691	3300006162	Watersheds	SCAGKYEGRWEHVSGMAGMKVVFRSGKATITEGLGGEMLFDCFTGGGKVAFYKAGSFTPFAYDFDINNDGTLQTPLGAIKKMGN*
Ga0075018_101706741	3300006172	Watersheds	MGCMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTL
Ga0075014_1010041372	3300006174	Watersheds	AVNELGPFDCFMGGGQVILYEAGSFKPFETLETNTDGTLQTELGAIKKMGN*
Ga0070765_1006084481	3300006176	Soil	HVSGMGGMRVVFHSGKATITEALGGEMPFDCFTGGGKVVFYKAGSFTPFSYDFDVNNDGTLQTPLGAIKKMGN*
Ga0070765_1018638741	3300006176	Soil	GKYEGRWEHVSGMGGMKVVFRSGKATISEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN*
Ga0075424_1023163761	3300006904	Populus Rhizosphere	VTVTGGLGGPEEFECWIGGGHISLYKAGSSTPLSYGFDVNNDGTLQTPLGAIKKMGN*
Ga0116119_11390931	3300009629	Peatland	MGGMTVVFRSGKATITEGLGGEMPFDCFLGDGKLVFYKAGSFTPFSYGFDVNNDGTLQTPLGAIKKMGN*
Ga0116117_12097162	3300009635	Peatland	GMKVIFRSGNATITEGLGGDMPFECFTGGSKVAFYKPGSFKPFDYDFDINNDGTLQTPLGAIKKMGN*
Ga0116120_10273724	3300009641	Peatland	KYEGRWEHVSGMGGMTVVFRSGKATITEGLGGEMPFDCFLGDGKLVFYKAGSFTPFSYGFDVNNDGTLQTPLGAIKKMGN*
Ga0105857_10877833	3300009650	Permafrost Soil	SGTATITEGLGGEMPFDCFTGGGKVAFYKPGSFIAFSYDFDINNDGTLETPLGVIKKMGN
Ga0116101_10781621	3300009759	Peatland	EGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN*
Ga0136449_1014503503	3300010379	Peatlands Soil	VFRSGKATITEGLGGEMPFDCFTGDGKVFFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN*
Ga0136449_1019649571	3300010379	Peatlands Soil	SCAGKYEGRWEHVSGMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN*
Ga0136449_1039904741	3300010379	Peatlands Soil	TITEGLGGEMPFDCFTGDGKVVFYKAGSFTAFSYDFDINNDGTLQTPLGAIKKMGN*
Ga0181532_104130852	3300014164	Bog	EGRWEHVSGMGGMTVVFRSGKATITEGLGGEMPFDCFLGDGKLVFYKAGSFTPFSYGFDVNNDGTLQTPLGAIKKMGN*
Ga0181526_110450632	3300014200	Bog	EHVSGMGGMKVVFRAGKATITEALGGEMLFDCFTGDGKVVFYKAGSFTPFSYDFDINIDGTLQTPLGAIKKMGN*
Ga0181537_100886293	3300014201	Bog	EHVSGMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN*
Ga0182018_100709581	3300014489	Palsa	GMGGMKVVFRSGKATITEGFSGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN*
Ga0182018_105331012	3300014489	Palsa	GKYEGRWEHVSGMGGMKVVFRSGKATITEGFSGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN*
Ga0182018_105650832	3300014489	Palsa	LGDILPEGFSGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIEKMGN*
Ga0182015_110502511	3300014495	Palsa	EMLFDCFTGGGKVVFYKAGSYTPFSYDFDINNDGTLQTPLGAIKKMGK*
Ga0181525_101456162	3300014654	Bog	LGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINDDGTLQTPLGAIKKMGN*
Ga0181525_101752323	3300014654	Bog	YEGRWEHVSGMAGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN*
Ga0182030_1000141853	3300014838	Bog	MAGMTVVFRSGKATVTEGLSGPMEFECWIGGGHISLYKAGSSTPFSYGFEVNNDGTLQTPLGAIKKMGN*
Ga0187802_100958612	3300017822	Freshwater Sediment	TVTGGLGGDDHFDCFLGDGKLILYKPGSFTPESFGFEINNDGTLQTPLGAIKKMGN
Ga0187801_103039171	3300017933	Freshwater Sediment	TEGLGGEMPFDCFTGDGKVVSYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0187821_101043512	3300017936	Freshwater Sediment	GGLGADEQFDCFLGDGKLVFYKPGSFTPSSFAFDINNDGTLQTPLGAIKKMGN
Ga0187819_100217984	3300017943	Freshwater Sediment	MGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVSYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0187779_109485161	3300017959	Tropical Peatland	KVTITGGLGADEHFDCFLGDGKLIFYQPGSFTPSSFAFDINNDGTLQTPLGAIKKMGN
Ga0187778_104442871	3300017961	Tropical Peatland	GMTTIFRSGKVTVSGGLGGDDVFDCFIAGRKIVLYKPGSSTPFPLGFDVNNDGTLQTPLGPIKKMGD
Ga0187869_100951053	3300018030	Peatland	TSCAGKYEGRWEHVSGMGGMTVVFRSGKATITEGLGGEMPFDCFLGDGKLVFYKAGSFTPFSYGFDVNNDGTLQTPLGAIKKMGN
Ga0187883_100533221	3300018037	Peatland	GRWEHVSGMGGMTVVFRSGRATITEGLGGEMPFDCFMGDGKLVFYKAGSFTPFSYGFDVNNDGTLQTPLGAIKKMGN
Ga0187883_104566221	3300018037	Peatland	GLGGEMPFDCFTGGGKVVFYQAGSFTPFAYVFDINNDGTLQTPLGAIKKMGN
Ga0187772_101025592	3300018085	Tropical Peatland	FRSGKVTITGGLGADEHFDCFLGDGKLIFYQPGSFTPSSFAFDINNDGTLQTPLGAIKKMGN
Ga0210407_101901441	3300020579	Soil	GMGGMKVVFRSGKATITEGLGGEMLFDCFTGNGKVVFYKAGSFTPFSYDFDINDDGTLQTPLGAIKKMGN
Ga0210403_100608861	3300020580	Soil	RSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMG
Ga0210399_107530392	3300020581	Soil	SCAGKYEGRWEHVSGMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0210399_115033451	3300020581	Soil	SEGLGGPMPFDCFTGGGKVVFYKAGSFKPFDYDFDINNDGTLQTPLTAIKKMGN
Ga0210395_112440301	3300020582	Soil	GMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0210401_109957912	3300020583	Soil	GKYEGRWEHVSGMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0210406_103587181	3300021168	Soil	EHVSGMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFAPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0210400_116356821	3300021170	Soil	MGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0210396_105166472	3300021180	Soil	GKYEGRWEHVSGMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFKPFSYDFDINDDGTLQTPLGAIKRMGK
Ga0210386_107867381	3300021406	Soil	ITEGLGGDMLFDCFTGDGKVVFYKAGSFQPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0210384_111321001	3300021432	Soil	GMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0210391_101349031	3300021433	Soil	EHVSGMGGMGVIFRSGHATGEALGGDFECFTGGGKVAFYKPGSPQSTYEFDINNDGTLQTPLGAIKKVGN
Ga0210391_102777101	3300021433	Soil	EGRWEHVSGMGGMKVIFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0210409_113034712	3300021559	Soil	GLGGEMLFDCFTGNGKVVFYKAGSFTPFSYDFDINDDGTLQTPLGAIKKMGN
Ga0210409_115430432	3300021559	Soil	MGGITVVFRSGKATVTEGLGGPMEFECWISGSQIVFYKAGSFTPFSYGFDMNNDGTLQTPLGAIKKMGN
Ga0242657_10042303	3300022722	Soil	VSGMGGMKVIFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0224550_10040201	3300022873	Soil	EMPFDCFTGEGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0224544_10462651	3300023250	Soil	SGKATITEGFSGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQSPLGAIKKMGN
Ga0224551_10391821	3300023259	Soil	MGGMTVIFRSGKATISEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0208219_10501231	3300025625	Arctic Peat Soil	GEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0209584_103091211	3300025878	Arctic Peat Soil	VSGMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKLVFYKAGSFTPFSYDFDINNDGTLETPLGAIKKMGN
Ga0209008_11454551	3300027545	Forest Soil	GLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0209330_10723431	3300027619	Forest Soil	GKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0209625_10118511	3300027635	Forest Soil	EGRWEHVSGMGGMTVVFRSGKVTITGGLGADEQFDCFLGEGKLVFYKPGSFTPSSFAFEINNDGTLQTPLGAVKKMGN
Ga0209772_100282503	3300027768	Bog Forest Soil	MAGMRVVFRSGTATITEGLGGEMPFDCFTGGGKVAFYKPGSFTPFSYDFDINNDGTLATPLGAIKKMGN
Ga0209139_101165731	3300027795	Bog Forest Soil	GLGGEMPFDCFTGEGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0209274_100874913	3300027853	Soil	GKYEGRWEHVSGMGGMGVIFRSGHATGEALGGDFECFTGGGKVAFYKPGSPQSTYEFDINNDGTLQTPLGAIKKVGN
Ga0209693_100330081	3300027855	Soil	GGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0209275_101679062	3300027884	Soil	VSGMGGMTVVFRSGKVTVTEGLGGPMEFECFTTGSEIVMYKAGSFTPFSYGFDVNNDGTLQTPLGAIKKMGN
Ga0209068_100037857	3300027894	Watersheds	MGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGK
Ga0209698_102247114	3300027911	Watersheds	VFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0302224_101252012	3300028759	Palsa	KYEGRWEHVSGMAGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYRAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0302269_11219571	3300028766	Bog	FRSGKATITEGLGGEMPFDCFTGGGKVAFYKAGSFTPFAYDFDINNDGTLQTPLGAIKKMGN
Ga0302225_102808122	3300028780	Palsa	FSGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0302189_101346911	3300028788	Bog	GLGGEMPFDCFTGGGKVAFYKAGSFTPFAYDFDINNDGTLQTPLGAIKKMGN
Ga0302155_102419521	3300028874	Bog	KATITEGLGGEMPFDCFTGGGKVAFYKAGSFTPFAYDFDINNDGTLQTPLGAIKKMGN
Ga0302154_106125201	3300028882	Bog	GLGGEMPFDCFTGGGKVAFYKAGSFTPFAYDFDINNDGTLQTALGAIKKMGN
Ga0311362_106222581	3300029913	Bog	GEMAFDCFTGDSKVVFYKPGSFTPFSYDFDINLDGTLETPLGVIKKMGN
Ga0311340_106432961	3300029943	Palsa	FRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0311340_106536191	3300029943	Palsa	EHVSGMEGMKVVFRSGKAMITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0311352_104724103	3300029944	Palsa	TEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0311346_105748432	3300029952	Bog	KYEGRWEHVSGMAGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0311339_100201311	3300029999	Palsa	TITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0311339_102199611	3300029999	Palsa	GMGGMKVVFRSGKATITEGFSGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0311338_105287602	3300030007	Palsa	MKVAFRSGKATITEGLGGEMPFDCFTGAGKVVFYKAGSFTPFSYDFDVNNDGTLQ
Ga0302179_103953972	3300030058	Palsa	GGEMPLDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0311353_107859892	3300030399	Palsa	FRLGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0311370_100113181	3300030503	Palsa	ITEGLGGEMPLDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0311372_124585961	3300030520	Palsa	GKYEGRWEHVSGMEGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0311356_106390083	3300030617	Palsa	EMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0311354_114494141	3300030618	Palsa	EGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINDDGTLQTPLGAIKKMGN
Ga0265753_10259512	3300030862	Soil	AGMEVIFRSGAATISEGLGGPMPFDCFTGGGKVVFYKPGSFQPFDYDFAVNNDGTLQTPIGAIKKMGN
Ga0075386_108621732	3300030916	Soil	VVFRSGKATIAEGLGGEMPFDCFTGNGKVVFYKAGSFTPFSYDFDINHDGTLQTPLGAIKKMGN
Ga0302307_106840811	3300031233	Palsa	EHVSGMGGMKVVFRSGKATITEGFSGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0302325_100897551	3300031234	Palsa	FRSGKATITEGFSGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0302325_102454711	3300031234	Palsa	SGMGGMKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0302325_121645541	3300031234	Palsa	FRSGKATVIEGLSGSMEFECWIGGGGHISLYEAGSSTPFAYGFDVNNDGTLQTPMGAIKKIGH
Ga0302320_115687931	3300031524	Bog	MAGITVVFRSGKATVTEGLSGPMEFECWIGGGHISLYKAGSSTPFSYGFEVNNDGTLQTPLGAIKKMGN
Ga0318561_101976661	3300031679	Soil	VSSATLPLSDYQRGKVTITGELGADEQFDCFLGDGQLVFCKPGSFAPSSFAFDINNDGTLQTPLAAIKKMGN
Ga0310686_1067409793	3300031708	Soil	EGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0310686_1095387711	3300031708	Soil	EGMRVVFRSGKATITEGLGGDMQFDCFTGAGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0310686_1103688613	3300031708	Soil	ITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0310686_1130442891	3300031708	Soil	RWEHVSGMGGMTVVFRSGKVTVTEGLGGPMEFECWMGDGKIVMYKGGSLTPFSYGFDVNNDGTLQTPLGAIKKMGK
Ga0310686_1134824512	3300031708	Soil	RVIFRSGTATITEGLGGEMPFDCFTGGGKVAFYKPGSFTPFSYDFDINNDGTLQTPLGTIKKMGN
Ga0310686_1134921571	3300031708	Soil	VVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN
Ga0310686_1178221742	3300031708	Soil	ASCAGKYEGRWEHVSGMAGMTVVFRSGKATVTEGLSGPMEFECWFGGGQISLYKAGSSTPFSYGFDVNNDGTLQTPLGAIKKMGN
Ga0307476_106061682	3300031715	Hardwood Forest Soil	GADEQFDCFLGDGKIVFYKPGSFTPSSFAFDINNDGTLQTPLGAIKKMGN
Ga0307474_108094621	3300031718	Hardwood Forest Soil	FRSGKATVTEGLGGPMEFECWISGSQISLYKAGSFTPFSYGFDVNNDGTLQTPLGAIKKMGN
Ga0307477_105652982	3300031753	Hardwood Forest Soil	GLGGEMPFDCFTGDGKVVFYKAGSFTSFSYDFDINNDGTLQTPLGAIKKMGN
Ga0307475_114774441	3300031754	Hardwood Forest Soil	MGGMTVVFRSGKATVTEGLGGPMEFECWISGSQIVLYKAGSFTPFSYGFDVNNDGTLQTPLGAIKKMGN
Ga0307475_115346001	3300031754	Hardwood Forest Soil	SGKATITEGLGGGMLFDCFTGDGKVVFYKAGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0307478_102369522	3300031823	Hardwood Forest Soil	EGLGGDMLFDCFTGDGKVAFYKTGSFTPFSYDFDINNDGTLQTPLGAIKKMGN
Ga0307478_103577791	3300031823	Hardwood Forest Soil	VFRSGKATVSEGLGGPMEFECWIGGSQIALYKAGSFTPFSYGFDVNNDGTLQTPLGAIKKMGN
Ga0335069_104048424	3300032893	Soil	HVSGLGGMTVVFRSGQVTVTGGLGSPEEFECWISGGHISLYKAGSSTPFSYGFEVNNDGTLQTPLGAIKKMGN
Ga0370515_0378632_3_203	3300034163	Untreated Peat Soil	MKVVFRSGKATITEGLGGEMPFDCFTGDGKVVFYKAGSFTPFSYDFDINLDGTLQTPLGAIKKMGN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065079

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences