NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F065141

Metagenome / Metatranscriptome Family F065141

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F065141
Family Type Metagenome / Metatranscriptome
Number of Sequences 128
Average Sequence Length 63 residues
Representative Sequence MHLRPPAFDHGVISFAWALFFGLFVWIGGAAVGYGSAVCFIVGAVVGFLVFLFVRVYGEDEPRRP
Number of Associated Samples 107
Number of Associated Scaffolds 128

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 62.99 %
% of genes near scaffold ends (potentially truncated) 30.47 %
% of genes from short scaffolds (< 2000 bps) 91.41 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (95.312 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(10.156 % of family members)
Environment Ontology (ENVO) Unclassified
(33.594 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(48.438 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 50.54%    β-sheet: 0.00%    Coil/Unstructured: 49.46%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.71
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
f.34.1.1: Mechanosensitive channel protein MscS (YggB), transmembrane regiond2vv5a32vv50.78882
d.89.1.0: automated matchesd3l57a_3l570.74782
f.33.1.1: Metal cation-transporting ATPase, transmembrane domaind2zxea42zxe0.72111
f.61.1.1: Multidrug and toxic compound extrusion (MATE) transportersd5c6na_5c6n0.71858
c.94.1.0: automated matchesd4paka14pak0.71474

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 128 Family Scaffolds
PF00156Pribosyltran 5.47
PF03979Sigma70_r1_1 2.34
PF04542Sigma70_r2 2.34
PF07883Cupin_2 1.56
PF02880PGM_PMM_III 1.56
PF04246RseC_MucC 0.78
PF00376MerR 0.78
PF00583Acetyltransf_1 0.78
PF10604Polyketide_cyc2 0.78
PF03640Lipoprotein_15 0.78
PF13248zf-ribbon_3 0.78
PF04775Bile_Hydr_Trans 0.78
PF13411MerR_1 0.78
PF01546Peptidase_M20 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 128 Family Scaffolds
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 4.69
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 2.34
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 2.34
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 2.34
COG0033Phosphoglucomutase/phosphomannomutaseCarbohydrate transport and metabolism [G] 1.56
COG1109PhosphomannomutaseCarbohydrate transport and metabolism [G] 1.56
COG3086RseC, positive regulator of sigma E activitySignal transduction mechanisms [T] 0.78
COG4315Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)Function unknown [S] 0.78

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.31 %
UnclassifiedrootN/A4.69 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908039|B3_v_NODE_74045_len_734_cov_5_550409All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria784Open in IMG/M
3300000956|JGI10216J12902_100096549All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria576Open in IMG/M
3300001538|A10PFW1_11175062All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria666Open in IMG/M
3300002568|C688J35102_119070057All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria634Open in IMG/M
3300002568|C688J35102_120543823All Organisms → cellular organisms → Bacteria1163Open in IMG/M
3300004081|Ga0063454_100843659All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria715Open in IMG/M
3300004153|Ga0063455_100732572All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria672Open in IMG/M
3300004479|Ga0062595_100983075All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria723Open in IMG/M
3300005179|Ga0066684_10525336All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria794Open in IMG/M
3300005327|Ga0070658_10028387All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales4491Open in IMG/M
3300005327|Ga0070658_10055724All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei3212Open in IMG/M
3300005327|Ga0070658_10553650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria995Open in IMG/M
3300005329|Ga0070683_100860315All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria869Open in IMG/M
3300005332|Ga0066388_103074729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria853Open in IMG/M
3300005336|Ga0070680_100122044All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia2175Open in IMG/M
3300005434|Ga0070709_10275536All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1221Open in IMG/M
3300005435|Ga0070714_101355641All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria694Open in IMG/M
3300005435|Ga0070714_102184383Not Available539Open in IMG/M
3300005436|Ga0070713_102130835All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria543Open in IMG/M
3300005445|Ga0070708_100515749All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1128Open in IMG/M
3300005471|Ga0070698_101008977All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria780Open in IMG/M
3300005529|Ga0070741_10004183All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria34101Open in IMG/M
3300005529|Ga0070741_11040219All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria700Open in IMG/M
3300005532|Ga0070739_10033636All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3705Open in IMG/M
3300005535|Ga0070684_101222731All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria707Open in IMG/M
3300005539|Ga0068853_101824530All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria589Open in IMG/M
3300005545|Ga0070695_100541782All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria906Open in IMG/M
3300005614|Ga0068856_100777232All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria977Open in IMG/M
3300005764|Ga0066903_101052556All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1494Open in IMG/M
3300005764|Ga0066903_107153853All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria578Open in IMG/M
3300006028|Ga0070717_10660064All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria949Open in IMG/M
3300006028|Ga0070717_10702881All Organisms → cellular organisms → Bacteria918Open in IMG/M
3300006028|Ga0070717_10966248All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria776Open in IMG/M
3300006034|Ga0066656_10851475All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria584Open in IMG/M
3300006163|Ga0070715_10996668Not Available522Open in IMG/M
3300006580|Ga0074049_10735536All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria526Open in IMG/M
3300006606|Ga0074062_10031626All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria902Open in IMG/M
3300006755|Ga0079222_11716164All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria603Open in IMG/M
3300006804|Ga0079221_10139418All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1253Open in IMG/M
3300006852|Ga0075433_10377485All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1252Open in IMG/M
3300006954|Ga0079219_12388992All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria513Open in IMG/M
3300009012|Ga0066710_100805162Not Available1440Open in IMG/M
3300009093|Ga0105240_11230198All Organisms → cellular organisms → Bacteria792Open in IMG/M
3300009093|Ga0105240_11531745All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria699Open in IMG/M
3300009098|Ga0105245_10752497All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1010Open in IMG/M
3300009098|Ga0105245_11614354All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium700Open in IMG/M
3300009545|Ga0105237_11767300All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria626Open in IMG/M
3300009551|Ga0105238_11121063All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria810Open in IMG/M
3300010039|Ga0126309_11250534All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria512Open in IMG/M
3300010040|Ga0126308_10786526All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria658Open in IMG/M
3300010044|Ga0126310_11258276All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria596Open in IMG/M
3300010047|Ga0126382_12097851All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria541Open in IMG/M
3300010359|Ga0126376_13045702All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria518Open in IMG/M
3300010362|Ga0126377_11182997All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria835Open in IMG/M
3300010366|Ga0126379_12504454All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria615Open in IMG/M
3300010375|Ga0105239_13027120All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria548Open in IMG/M
3300011992|Ga0120146_1057930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria636Open in IMG/M
3300011998|Ga0120114_1058400All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria751Open in IMG/M
3300012208|Ga0137376_10881430Not Available769Open in IMG/M
3300012210|Ga0137378_11307349All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria641Open in IMG/M
3300012212|Ga0150985_106533023All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria541Open in IMG/M
3300012357|Ga0137384_11331802All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria565Open in IMG/M
3300012397|Ga0134056_1156674All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria542Open in IMG/M
3300012469|Ga0150984_123301035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria721Open in IMG/M
3300012924|Ga0137413_11101369All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria628Open in IMG/M
3300012951|Ga0164300_10730497All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria604Open in IMG/M
3300012955|Ga0164298_10148582All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1313Open in IMG/M
3300012955|Ga0164298_10995030All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria619Open in IMG/M
3300012957|Ga0164303_11036779All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria587Open in IMG/M
3300012960|Ga0164301_11267886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria596Open in IMG/M
3300012960|Ga0164301_11502161All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria555Open in IMG/M
3300012989|Ga0164305_10317474All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1159Open in IMG/M
3300013104|Ga0157370_11125174All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria709Open in IMG/M
3300013105|Ga0157369_11436682All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria702Open in IMG/M
3300013296|Ga0157374_12894964All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria507Open in IMG/M
3300013307|Ga0157372_10770889All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1118Open in IMG/M
3300013308|Ga0157375_12344699All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria637Open in IMG/M
3300013503|Ga0120127_10143027All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria567Open in IMG/M
3300013765|Ga0120172_1023523All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei1772Open in IMG/M
3300013772|Ga0120158_10340120All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria710Open in IMG/M
3300014969|Ga0157376_10447678All Organisms → cellular organisms → Bacteria1259Open in IMG/M
3300015203|Ga0167650_1017589All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1979Open in IMG/M
3300015373|Ga0132257_100584282All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1378Open in IMG/M
3300015373|Ga0132257_102649978All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria652Open in IMG/M
3300018468|Ga0066662_10354849All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1264Open in IMG/M
3300019890|Ga0193728_1056889All Organisms → cellular organisms → Bacteria1889Open in IMG/M
3300020069|Ga0197907_11066681All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1278Open in IMG/M
3300020069|Ga0197907_11279194All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria970Open in IMG/M
3300020070|Ga0206356_11218999All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1237Open in IMG/M
3300020076|Ga0206355_1415772All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria776Open in IMG/M
3300020078|Ga0206352_10127392All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria595Open in IMG/M
3300020078|Ga0206352_10289588All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria602Open in IMG/M
3300020080|Ga0206350_10103171All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria737Open in IMG/M
3300021384|Ga0213876_10247571All Organisms → cellular organisms → Bacteria947Open in IMG/M
3300021384|Ga0213876_10653069All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria560Open in IMG/M
3300021384|Ga0213876_10700729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria539Open in IMG/M
3300022467|Ga0224712_10107551All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1192Open in IMG/M
3300022467|Ga0224712_10224983All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria860Open in IMG/M
3300025898|Ga0207692_10161101All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1293Open in IMG/M
3300025913|Ga0207695_10370244All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1319Open in IMG/M
3300025916|Ga0207663_10360979All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1102Open in IMG/M
3300025922|Ga0207646_11477438All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria589Open in IMG/M
3300025924|Ga0207694_11489922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria571Open in IMG/M
3300025928|Ga0207700_11048192All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria729Open in IMG/M
3300026116|Ga0207674_11846595All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria571Open in IMG/M
3300026142|Ga0207698_11940692All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria603Open in IMG/M
3300027787|Ga0209074_10328192Not Available621Open in IMG/M
3300027821|Ga0209811_10199178All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria756Open in IMG/M
3300027882|Ga0209590_10832158All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria585Open in IMG/M
3300028065|Ga0247685_1028219All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria674Open in IMG/M
3300028558|Ga0265326_10043658All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1272Open in IMG/M
3300028666|Ga0265336_10148724All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria697Open in IMG/M
3300028718|Ga0307307_10166264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria692Open in IMG/M
3300028824|Ga0307310_10534183All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria593Open in IMG/M
3300031231|Ga0170824_115136353All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria502Open in IMG/M
3300031235|Ga0265330_10107764All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1191Open in IMG/M
3300031670|Ga0307374_10002910All Organisms → cellular organisms → Bacteria29801Open in IMG/M
3300031720|Ga0307469_11833001All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria587Open in IMG/M
3300031938|Ga0308175_100346860All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1532Open in IMG/M
3300031938|Ga0308175_102147577All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria626Open in IMG/M
3300031939|Ga0308174_10003630All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia7903Open in IMG/M
3300031939|Ga0308174_10161241All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1678Open in IMG/M
3300031939|Ga0308174_10760660All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium812Open in IMG/M
3300032074|Ga0308173_10411028All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1193Open in IMG/M
3300032896|Ga0335075_10045298All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales6174Open in IMG/M
3300034195|Ga0370501_0011910All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2409Open in IMG/M
3300034268|Ga0372943_0009676All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales5008Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere10.16%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.81%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere7.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere5.47%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost4.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.69%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.91%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.12%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.12%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.12%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.12%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.12%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.34%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.34%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.34%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.34%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots2.34%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.34%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.34%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere2.34%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.34%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.56%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.56%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.56%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.56%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.78%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.78%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.78%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.78%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.78%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.78%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.78%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.78%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908039Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Bog Site B4EnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005532Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006580Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006606Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300011992Permafrost microbial communities from Nunavut, Canada - A23_65cm_12MEnvironmentalOpen in IMG/M
3300011998Permafrost microbial communities from Nunavut, Canada - A30_35cm_6MEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012397Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300013503Permafrost microbial communities from Nunavut, Canada - A23_5cm_12MEnvironmentalOpen in IMG/M
3300013765Permafrost microbial communities from Nunavut, Canada - A30_80cm_6MEnvironmentalOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015203Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020076Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)EnvironmentalOpen in IMG/M
3300020077Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020080Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021384Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9Host-AssociatedOpen in IMG/M
3300022467Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028065Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26EnvironmentalOpen in IMG/M
3300028558Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaGHost-AssociatedOpen in IMG/M
3300028666Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaGHost-AssociatedOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031235Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaGHost-AssociatedOpen in IMG/M
3300031670Soil microbial communities from Risofladan, Vaasa, Finland - OX-3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300034195Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17EnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
B3_v_007053602124908039SoilMHLRPPTFDHGVISFIWAVFFGLLIWLGGSMIGYGSAMTFIIGCVVGFLVFVFVRVYGEEEPRRP
JGI10216J12902_10009654913300000956SoilMHFRSPSIDPGVTAFLWALFFGLFIWIGGRAVGFSSGTTFIAGCVCGFLIFLLIRAYGEDEPRRP*
A10PFW1_1117506233300001538PermafrostVISFVWALFFGLFVWIGGAAVGYGSAVCFIVGCVVAFLVFLFVRVYGEDEPRRP*
C688J35102_11907005713300002568SoilMHLRPPAFDHGVISFIWAVVFGLFIWIGGAAVGYGSAVCFIVGAVAAFLVFLFVRVYGEDEPRRP*
C688J35102_12054382323300002568SoilMHLRPPATAPGLTAFIWALFFGLFIWIGGRAVGYSSGVTFIVGAVAAFLIFVFVRA
Ga0063454_10084365913300004081SoilMHLRPPAIDHGVTSFLWAVFFGLFIWIGGSALGYGSATCFIAGCVIAFLVFLFVRVYGEDEPRRP*
Ga0063455_10073257213300004153SoilMHLRPPATAHGTSAFLWAVFFGLLIWLGGSFVGYSSGVMFILGCVAGFLVFLFVNAYGDDEPRTP*
Ga0062595_10098307513300004479SoilVSFAWALFFGLFVWIGGAAVGYGSAVSFIVGAVVGFLVFLFVRVYGEDEPRRP*
Ga0066684_1052533613300005179SoilVNFHFRLPAFDHGITSFIWAFFFFVFIWLGGISVGFGGAVTFIVGAVAGFLIFLFIRLYGEDEPRIP*
Ga0070658_1002838783300005327Corn RhizosphereMHLRPPAFDHGVISFVWAVFFGLVVWLGGSFVGYSSGITFVTGCVVAFLVFLYVRVYGEDEPRRP*
Ga0070658_1005572413300005327Corn RhizosphereRPPAFDHGVISFAWALFFGLFVWIGGAAVGYGSAVCFIVGAVVGFLVFLFVRVYGEDEPRRP*
Ga0070658_1055365013300005327Corn RhizosphereMHLRPPAFDHGVISFAWALFFGLFVWIGGAAVGYGSAVCFIVGAVVGFLVFLFIRTYGEDEPRRP*
Ga0070683_10086031533300005329Corn RhizosphereRPPAFDHGVISFAWALFFGLFVWIGGAAVGYGSAVCFIVGAVVGFLVFLFIRTYGEDEPRRP*
Ga0066388_10307472913300005332Tropical Forest SoilMHLRLPAFAPGVTAFLWALFFFLFIWIGGVAVGYSGAVMFIVGAVSGFLCFLFIRVYGEDEPRTP*
Ga0070680_10012204413300005336Corn RhizosphereMHLRPPAFDHGVISFLWAVFFGLVVWLGGAFLGYSSAITFVTGCVVAFLTFLFVRVYGEDEPRRP*
Ga0070709_1027553633300005434Corn, Switchgrass And Miscanthus RhizosphereMHLRLPAFDRGITSFLWAFFFFVYIWIAGIAVGFGGAVTFIVGAVAGFLIFLFIRLYGEDEPRTP*
Ga0070714_10135564113300005435Agricultural SoilMHLRLPAFDHGVISFIWALIFGLFIWIGGSAVGFGSAVTFIVGCVAGFLIFVAVRVYGEDEPRRP*
Ga0070714_10218438323300005435Agricultural SoilMRAPAFDHGVTSFIWAFFFFVFIWIGGIAVGFGGAVTFIVGAVAGFLIYLYIRVYGEDEPRIP*
Ga0070713_10213083523300005436Corn, Switchgrass And Miscanthus RhizosphereMHLRPPATDHGVTSFLWAVFFWLFIWIGGSAVGYSSSMTFIIGAVVGFLAFLLIRVYGEDEPRRP*
Ga0070708_10051574913300005445Corn, Switchgrass And Miscanthus RhizosphereMHLRSPAFDHGVISFLWGLFFGLFIWIGGSAVGYSSAVTFIAGAVVGFLTFLFVRVYGEDEPRRP*
Ga0070698_10100897713300005471Corn, Switchgrass And Miscanthus RhizosphereMHLRLPAFDHGVISFLWGLFFGLFIWIGGSAVGYSSAVTFIAGAVVGFVTFLFVRVYGEEEPRRP*
Ga0070741_1000418383300005529Surface SoilMHLRPPSIDHGVTSFIWAMVFGLFIWIGGSAVGYGSAVSFMVGCVAGFLCFVFIRVYGEDEPRRP*
Ga0070741_1104021923300005529Surface SoilVPHLRPPSVDPGITSFVWAVFFGLFIWIGGAAVGYGSAMSFIVGCVVAFLVFLFVRIYGGDEPRRP*
Ga0070739_1003363623300005532Surface SoilMHLRPPAFDHGVISFLWSVLFGGFVWIGGAAVGYGGATSFVAGCVVAFLTFVFVRVYGEDEPRRP*
Ga0070684_10122273113300005535Corn RhizosphereHGVISFAWALFFGLFVWIGGAAVGYGSAVCFIVGAVVGFLVFLFIRTYGEDEPRRP*
Ga0068853_10182453013300005539Corn RhizosphereMHLRPPAIDHGITSFIWALFFGLLIWIGGAAVGYSSALTFIVGCVAAFLIFVFIRVYGEDEPRR
Ga0070695_10054178213300005545Corn, Switchgrass And Miscanthus RhizosphereMHLRSPSVAPGFTAFLWALFFGLFIWIGGRAVGFSSGVTFIAGAVCGFLIFLVIRVYGDEEPRRP*
Ga0068856_10077723223300005614Corn RhizosphereMHLRPPAFDHGVISFVWAVFFCLVVWLGGSFVGYSSGITFVTGCVVAFLVFLYVRVYGEDEPRRP*
Ga0066903_10105255613300005764Tropical Forest SoilMHFRSPSVDPGVTAFLWALFFGLFIWIGGRAVGFSSGTTFIAGCVCGFLIFLLIRTYGEDEPRRP*
Ga0066903_10715385313300005764Tropical Forest SoilMHLRLPAFAPGVTAFLWAFFFFVFIWIGGIAVGYAGAVTFIVGAVAGFLCFLFIRVYGEDEPRTP*
Ga0070717_1066006413300006028Corn, Switchgrass And Miscanthus RhizosphereMHLRPPATDHGVTSFLWAVFFGLFIWIGGSAVGYSSSMTFIIGAVVGFLAFLVIRVYGEDEPRRP*
Ga0070717_1070288113300006028Corn, Switchgrass And Miscanthus RhizosphereVHLRSPATDHGVTSFLWAIFFALFIWIGGSAVGYGSAVCFIVGCVLGFLIFLF
Ga0070717_1096624823300006028Corn, Switchgrass And Miscanthus RhizosphereMHLRPPAFDHGVISLLWGLFFGLFVWLGGAFVGYDSAVTFIIGAVVGFLSFLAVRVYGEDEPRRP*
Ga0066656_1085147513300006034SoilMHLRPPAFDHGVIAFIWAVVFGLFIWIGGAAVGYGSAVSFIVGAVAAFLIFVFVRVYGEDEPRRP*
Ga0070715_1099666813300006163Corn, Switchgrass And Miscanthus RhizosphereMRAPAFDHGVTSFIWAFFFFVFIWIGGIAVGFGGAVTFIVGAVAGFLIYLYIRVYGEDEPQIP*
Ga0074049_1073553623300006580SoilGVISFIWALIFGLFIWIGGSAVGFGSAVTFIVGCVAGFLIFVAVRVYGEDEPRRP*
Ga0074062_1003162613300006606SoilMHLRPPAIDHGITSFLWAFFFGLLIWIGGSAVGYSGAITFIIGCVAGFLIFVFVRVYGEDEPRRP*
Ga0079222_1171616423300006755Agricultural SoilMHLRLPAFDRGITSFFWALFFGLFVWIGGIAVGFSGAFSFTIGAVAGAAIFLYVRTNGEDDPSRP*
Ga0079221_1013941813300006804Agricultural SoilMHLRPPAVDHGITSFLWAIFFGLLIWIGGAAVGYSSAITFIVGCVAAFLIFVFIRVYGEDEPRRP*
Ga0075433_1037748523300006852Populus RhizosphereMHFRSPSVAPGVTAFLWALFFGLFIWIGGRAVGFPSGTTFIAGCVCGFLIFLFIRVYGEDEPRRP*
Ga0079219_1238899213300006954Agricultural SoilMHLRPPAVDHGITSFLWAFFFGLLIWIGGSAVGYDGAITFIVGCVAAFLIFLYIRVYGEDEPRRP*
Ga0066710_10080516243300009012Grasslands SoilLPAFDHGITSFAWALFFGLFIWIGGSAVGFGSAVTFIVGCVAGFLIFFFVRVYGEDEPRR
Ga0105240_1123019813300009093Corn RhizosphereMHLRPPAFDHGVISFLWAVFFGLVVWLGGAFLGYSSAITFVTGCVVAFLTFLFV
Ga0105240_1153174513300009093Corn RhizosphereIFLVRNDPLGSRPMHLRPPAFDHGVISFAWALFFGLFVWIGGAAVGYGSAVCFIVGAVVGFLVFLFIRTYGEDEPRRP*
Ga0105245_1075249723300009098Miscanthus RhizosphereMHLRPPAIDHGITSFIWAVLFGAFIWIGGVAVGMSSALTFIVGAAAAFLIFVFVRAYGEDDPRPPR*
Ga0105245_1161435433300009098Miscanthus RhizosphereDRGITSFLWAFFFFVYIWIAGIAVGFGGAVTFIVGAVAGFLIFLFIRLYGEDEPRTP*
Ga0105237_1176730013300009545Corn RhizosphereVHLRPPAFDHGVISFIWALFFGLLIWVGGSALGYASALMFVLGAVAGFLIVLFVRVYGEDEPRRP*
Ga0105238_1112106313300009551Corn RhizospherePMHLRPPAFDHGVISFAWALFFGLFVWIGGAAVGYGSAVCFIVGAVVGFLVFLFIRTYGEDEPRRP*
Ga0126309_1125053413300010039Serpentine SoilRMPSIARGITSFAWAFFFFVFIWIGGIAVGFSKATCFIVGAVAGFLSFLFVRVYGEEEPKRP*
Ga0126308_1078652613300010040Serpentine SoilMPSIARGVTAFAWAFFFFLLIWIGGVAVGFSKATSFIVGAVAGFLSFLFVRVYGEDEPRRP*
Ga0126310_1125827623300010044Serpentine SoilSIARGITSFAWAFFFFVFIWIGGIAVGFSKATCFIVGAVAGFLSFLFVRVYGEEEPKRP*
Ga0126382_1209785113300010047Tropical Forest SoilVRLAGWDKGVTGLRWALFFGLFIWIGGRAVGFPSGTTFIAGCVCGFLIFLFIRVFGEDEPRR
Ga0126376_1304570213300010359Tropical Forest SoilMHLRPPAFDHGVISLLWGVFFGLFVWIGGAAVGYGSAVTFIIGCVVGFLTFLAVRVYGEDEPRRP*
Ga0126377_1118299713300010362Tropical Forest SoilMHLRPPAFDHGVISLLWGLFFGLFVWIGGAAVGYGSAVTFIIGCVVGFLTFLAVRVYGEDEPRRP*
Ga0126379_1250445413300010366Tropical Forest SoilMHLRLPAFAPGVTAFLWAFFFFVFIWIGGIAVGYAGAVTFIVGAVAGFLSFLFIRVYGEDEPRTP*
Ga0105239_1302712013300010375Corn RhizosphereHGVISFAWALFFGLFVWIGGAAVGYGSAVCFIVGAVVGFLVFLFVRVYGEDEPRRP*
Ga0120146_105793013300011992PermafrostPSIDHGITSFLWAFFFGLYIWIGGSFVGFNGAVTFIAGCVVGFLTFLFVRIYGDDAPRRSA*
Ga0120114_105840013300011998PermafrostMHLRVPAIDHGIISFIWALVFGLFIWIGGSAVGFGSAVTFIVGCVVGFLSFVFVRVYGEDEVRRP*
Ga0137376_1088143023300012208Vadose Zone SoilMHLPRLPAIDHGIISFIWALVFGLFIWIGGSAVGFGSAVTFIVGAVAGFLIFVFVRVYGE
Ga0137378_1130734913300012210Vadose Zone SoilMHLRSPAFDHGVISFLWGLFFGLFIWIGGSAVGYGSAVTFIAGAVVGFLTFLFV
Ga0150985_10653302313300012212Avena Fatua RhizosphereMHLRPPAFDHGVISFAWALFFGLFVWIGGAAVGYGSAVCFIVGAVVGFLVFLFVRVYGEDEPRRP*
Ga0137384_1133180213300012357Vadose Zone SoilMHLRSPAFDHGVISFLWGLFFGLFIWIGGSAVGYSSAVTFVAGAVVGFLTFLFVRVYGEEEPRQP*
Ga0134056_115667413300012397Grasslands SoilMHLRLPAFDHGITSFAWALFFALFIWIGGSAVGFGSAVTFIVGCVAGFLIFVFVRVYGEDEPRRP*
Ga0150984_12330103513300012469Avena Fatua RhizospherePAFDHGVISFAWALFFGLFVWIGGAAVGYGSAVCFIVGAVVGFLVFLFVRVYGEDEPRRP
Ga0137413_1110136913300012924Vadose Zone SoilMHLPRLPAFDHGVISFIWALIFGLFIWIGGSAVGFGSAVTFIVGAVAGFLIFVFVRVYGEEEARRD*
Ga0164300_1073049713300012951SoilMHLRLPAFDHGVISFIWAVIFGLFIWIGGSAVGFGSAVTFIIGCVAGFLIFVAVRVYGEDEPRRP*
Ga0164298_1014858233300012955SoilPAIDHGITSFLWAFFFGLLIWIGGSAVGYSGAITFIIGCVAGFLIFVFVRVYGEDEPRRPCGPASAKTSSRARSPPIRSSRRV*
Ga0164298_1099503013300012955SoilPAFDHGVTSFAWALFFGLFVWIGGAAVGYGNAVCFIIGGVVGFLVFIFVRVYGEAEPRRP
Ga0164303_1103677923300012957SoilMHLSPNAFDHGVTSFAWALFFGLFIWIGGAAVGYGSAVCFIIGAVVSFFVFIFVRVYGEDEPRRP*
Ga0164301_1126788613300012960SoilMHLRPPAFDHGITSFIWAFFFFLYIWIAGIAVGYGGAVTFIVGAVAGFLIFLFIRLYGEDEPRTP*
Ga0164301_1150216123300012960SoilMHLRLPAFDHGVISFIWALIFGLFIWIGGSAVGFGSAVTFIIGCVAGFLIFVAVRVYGEDEPHRP*
Ga0164305_1031747433300012989SoilPPAIDHGITSFLWAFFFGLLIWIGGSAVGYSGAITFIIGCVAGFLIFVFVRVYGEDEPRRP*
Ga0157370_1112517433300013104Corn RhizosphereFDHGVISFLWAVFFGLVVWLGGAFLGYSSAITFVTGCVVAFLTFLFVRVYGEDEPRRP*
Ga0157369_1143668223300013105Corn RhizosphereMHLRPPAIDHGIVSFVWALIFGAFIWIGGAAVGYGSAVSFVAGCVAGFLIFVFVRVYGEDEPRRP*
Ga0157374_1289496413300013296Miscanthus RhizosphereMHLRPPSIAHGIIAFLWAAFFGLFIWIGGIALGFNGAMTFIIGCVAAF
Ga0157372_1077088923300013307Corn RhizosphereMHLRPPAIDHGIVSFVWALIFGAFIWIGGAAVGYGSAVSFVAGCVAGFLIFVFVRVYGADEPRRP*
Ga0157375_1234469913300013308Miscanthus RhizosphereMHLRLPAFDHGVTSFIWALFFGLFIWIGGRAVGYPSSTTFIIGAVAGFVIFLLIRNYGED
Ga0120127_1014302723300013503PermafrostMHLRVPAIDHGIISFIWALFFGLFIWIGGSAVGFGSAVTFIVGCVVGFLSFVFV
Ga0120172_102352313300013765PermafrostMHLRVPAIDHGIISFIWALVFGLFIWIGGSAVGFGSAVTFIVGCVVGVLSFVFVRVYGEDEVRRP*
Ga0120158_1034012023300013772PermafrostMHLRPPAFDHGVISFAWALFFGLFVWIGGAAVGYSSAVCFIVGCVVAFLVFLFVRVYGEDEPRRP*
Ga0157376_1044767813300014969Miscanthus RhizosphereMHLRLPAFDHGVTSFIWALIFGLFIWIGGSAVGYGSAVSFIVGCVAGFLIFLF
Ga0167650_101758913300015203Glacier Forefield SoilVLHLRPPAIDHGVTSFLWGLFFGLLVWLGGGMIGYSSAITFVLGAVVGFLAFVFVRVYGEDEPRRP*
Ga0132257_10058428213300015373Arabidopsis RhizosphereRPPAFDHGVISFVWALFFGLFVWIGGAAVGYGSAVCFIVGAVVGFLVFLFVRVYGEDEPRRP*
Ga0132257_10264997813300015373Arabidopsis RhizosphereTSFLWALFFGFLIWIGGAAVGFSSTITFIVGCVAGFLIFLLVRVYGEDEPRRP*
Ga0066662_1035484933300018468Grasslands SoilMHLRPPSISHGITSFLWAFFLGLFIWIGGAAVGISSAISFIAGAVGGFLIFVFVRVYGEDEPRRP
Ga0193728_105688923300019890SoilMHLPRLPAFDHGVISFIWAVIFGLFIWIGGSAVGFGSAVTFIVGAVAGFLIFVFVRVYGEDEPRRD
Ga0197907_1106668133300020069Corn, Switchgrass And Miscanthus RhizosphereMHLRPPAFDHGVISFVWAVFFGLVVWLGGSFVGYSSGITFVTGCVVAFLVFLYVRVYGEDEPRRP
Ga0197907_1127919413300020069Corn, Switchgrass And Miscanthus RhizosphereHGVISFLWAVFFGLVVWLGGAFLGYSSAITFVTGCVVAFLTFLFVRVYGEDEPRRP
Ga0206356_1121899923300020070Corn, Switchgrass And Miscanthus RhizosphereMHLRPPAFDHGVISFLWAVFFGLVVWLGGAFLGYSSAITFVTGCVVAFLTFLFVRVYGEDEPRRP
Ga0206355_141577213300020076Corn, Switchgrass And Miscanthus RhizosphereMHLRPPAIDHGIVSFVWALIFGAFIWIGGAAVGYGSAVSFVAGCVAGFLIFVFVRVYGEDEPRRL
Ga0206351_1032838213300020077Corn, Switchgrass And Miscanthus RhizosphereGIVSLIWAIVFGAFIWVGGAAFGFGSAVSFIVGCVAGFLIFVFVRVYGEDEARRP
Ga0206352_1012739223300020078Corn, Switchgrass And Miscanthus RhizosphereMHLRPPAFDHGVISFVWAVFFGLVVWLGGAFLGYSSAITFVTGCVVAFLTFLFVRVYGEDEPRRP
Ga0206352_1028958833300020078Corn, Switchgrass And Miscanthus RhizosphereMHLRPPAFDHGVISFAWALFFGLFVWIGGAAVGYGSAVCFIVGAVVGFLVFLFVRVYGEDEPRRP
Ga0206350_1010317113300020080Corn, Switchgrass And Miscanthus RhizosphereRPPAFDHGVISFAWALFFGLFVWIGGAAVGYGSAVCFIVGAVVGFLVFLFIRTYGEDEPRRP
Ga0213876_1024757123300021384Plant RootsVHLRPPAFAHGVTSFLWELFFALFIWIGGSAVGYGSAVCFIVGAVLGFLIFVFVRVYGEDEPSRP
Ga0213876_1065306923300021384Plant RootsMHLRPPAFDHGVTSFVWAVVFGLFIWIGGAAVGYSSAVSFVVACVAGFLIFVFVRVYGEDEPRRP
Ga0213876_1070072913300021384Plant RootsMHLRPPSFDHGVISFAWALFFALFVWIGGSAVGYGSAVCFIVGAVVGFLVFLFVRVYGEDEPRRP
Ga0224712_1010755123300022467Corn, Switchgrass And Miscanthus RhizosphereMHLRPPAIDHGIVSFVWALIFGAFIWIGGAAVGYGSAVSFVAGCVAGFLIFVFVRVYGEDEPRRP
Ga0224712_1022498313300022467Corn, Switchgrass And Miscanthus RhizosphereMHLRPPAFDHGVISFAWALFFGLFVWIGGAAVGYGSAVCFIVGAVVGFLVFLFIRTYGEDEPRRP
Ga0207692_1016110123300025898Corn, Switchgrass And Miscanthus RhizosphereMHLRPPATDHGVTSFLWAVFFGLFIWIGGSAVGYSSSMTFIIGAVVGFLAFLLIRVYGEDEPRRP
Ga0207695_1037024413300025913Corn RhizosphereMHLRPPAFDHGVISFLWAVFFGLVVWLGGSFVGYSSGITFVTGCVVAFLVFLYVRVYGEDEPRRP
Ga0207663_1036097923300025916Corn, Switchgrass And Miscanthus RhizosphereMHLHPPATDHGVTSFLWAVFFWLFIWIGGSAVGYSSSMTFIIGAVVGFLAFLLIRVYGEDEPRRP
Ga0207646_1147743813300025922Corn, Switchgrass And Miscanthus RhizosphereMHLRLPAFDHGVISFLWGLFFGLFIWIGGSAVGYSSAVTFIVGAVVGFVTFLFVRVYGEEEPLSAGCVARVPCPELR
Ga0207694_1148992213300025924Corn RhizosphereDHGVISFAWALFFGLFIWIGGSAVGYGSAVCFIVGAVAGFLVFLFVRVYGEDEPRRP
Ga0207700_1104819213300025928Corn, Switchgrass And Miscanthus RhizosphereMHLRPPATDHGVTSFLWAVFFWLFIWIGGSAVGYSSSMTFIIGAVVGFLAFLVIRVYGEDEPRRP
Ga0207674_1184659513300026116Corn RhizosphereMHLRPPAFDHGVISFVWAVFFGLVVWLGGSFVGYSSGITFVTGCVVAFLVFLYVRVYGEDEPRRPCGPTSARTSRRA
Ga0207698_1194069223300026142Corn RhizosphereMHLRPPAFDHGVISFLWAVFFGLVVWLGGAFVGYSSGITFVTGCVVAFLAFLFVRVYGEDEPRRP
Ga0209074_1032819213300027787Agricultural SoilMRLPAFDHGVTSFAWAFFFFVFIWIGGIAVGYDGAVTFIVGAVAGFLIFVYIRRYGEDEPRTP
Ga0209811_1019917813300027821Surface SoilMHLRLPAFDHGVTSFLWGVFFGLLIWLGGAFVGYDSGITFITGAVAGFLIFVFVRVYGEDEPRAR
Ga0209590_1083215823300027882Vadose Zone SoilMHLRPPAFDHGVISFAWALFFGLFVWIGGAAVGYGSAVCFIVGCVVAFLVFLFVRVYGEDEPRRP
Ga0247685_102821923300028065SoilVRLPAFDKGVTAFFWALFFGLFIWIGGAAVGYPSAQSFIVGCVGGFLVFLLVRHYGEDEPRRP
Ga0265326_1004365833300028558RhizosphereMHLRPPAIAHGIISLLWAVFFGLFIWIGGSAVGYSSAETFLIGAVVGFLAFVFVRVYGDDEPRRP
Ga0265336_1014872413300028666RhizosphereMHLRPPAFDHGVISFIWALFFGLLIWLGGGMIGYSSAMTFIIGCVVGFLVFVFVRVYGEEEPRRP
Ga0307307_1016626413300028718SoilMHLRLPAIDHGIISFLWGLFFGLFIWIGGSAVGFGSAVTFIIGCVAAFLIFVFVRVYGEDEARRP
Ga0307310_1053418323300028824SoilMHLRLPAIDHGIISFAWALFFGLFIWIGGSAVGFGSAVTFVVGCVAGFLIFVFVRVYGEDEPARRP
Ga0170824_11513635313300031231Forest SoilMHLRSPAFDHGVISFLWGLFFGLFIWIGGSAVGYSSAVTFIAGAVVGFLTFLFVRVYGEEEPRRP
Ga0265330_1010776413300031235RhizosphereMHLRPPAIDHGIISFLWAVFFGLFIWIGGSAVGYGSAETFLIGAVVGFLTFVFVRVYGDEEPRRP
Ga0307374_10002910103300031670SoilMHLRPPAFAHGVISFVWALFFGLLVWLGGSALGYSSAVSFITGCVFGFLAFLFVRVYGEDEPRRP
Ga0307469_1183300123300031720Hardwood Forest SoilMHLRPPAFDHGITSFIWAFFFFLYIWIAGIAVGYGGAVTFIVGAVAGFLIFLFIRLYGEDEPRTP
Ga0308175_10034686023300031938SoilMHLRPPAFDHGVISFLWAVFFGLFIWIGGAAVGYGSAVCFVTGCVVAFLVFLFVRVYGEEEPRRP
Ga0308175_10214757713300031938SoilMHLRPPAFDHGIISLIWAIVFGGFIWIGGAAVGYGSAVSFIAGCVAGFLIFVFVRVYGEDEARRP
Ga0308174_1000363043300031939SoilMHLRPPVIDHGIVSFIWALVFGGFIWIGGAAVGFGGAVSFVAGCVAGFLAFIFVRVYGEDEPRRP
Ga0308174_1016124113300031939SoilMHLRPPAFDHGVISFLWAVFFGLVVWLGGAFVGYSSGITFVTGCVVAFLVFLFVRVYGEDEPRRP
Ga0308174_1076066023300031939SoilMHLRPPAVDHGIVSFIWALVFGGFIWIGGAAVGFGSAVSFVAGCVAGFLAFVF
Ga0308173_1041102813300032074SoilMHLRPPAFDHGIISLIWAIVFGVFIWIGGAAVGYSSAVSFIAGCLAGFLIFVFVRVYGEDEARRP
Ga0335075_1004529873300032896SoilMHLRPPSIDHGVISFIWAVAFGLFIWLGGSMIGYGSAVTFMVGCVAGFLCFIFIRVYGDDEPRRP
Ga0370501_0011910_177_3743300034195Untreated Peat SoilMHLRPPAFDHGVISFIWAVFFGALIWIGGSMIGYGSAMTFIIGCVVGFLVFVFVRVYGEEEPRRP
Ga0372943_0009676_476_6763300034268SoilVPHLRPPSVDHGVTSFVWAVFFALFVWIGGAAVGYGGAVSFIAGCVVGFLVFLFVRVYGEDEPRRP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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