NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F065168

Metagenome / Metatranscriptome Family F065168

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F065168
Family Type Metagenome / Metatranscriptome
Number of Sequences 128
Average Sequence Length 56 residues
Representative Sequence MPHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHVHT
Number of Associated Samples 99
Number of Associated Scaffolds 128

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 56.25 %
% of genes near scaffold ends (potentially truncated) 31.25 %
% of genes from short scaffolds (< 2000 bps) 75.00 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (91.406 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(21.875 % of family members)
Environment Ontology (ENVO) Unclassified
(46.875 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(57.031 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 43.68%    β-sheet: 0.00%    Coil/Unstructured: 56.32%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 128 Family Scaffolds
PF00583Acetyltransf_1 10.16
PF12681Glyoxalase_2 4.69
PF00903Glyoxalase 3.91
PF07366SnoaL 3.12
PF12833HTH_18 3.12
PF12847Methyltransf_18 1.56
PF13088BNR_2 1.56
PF07992Pyr_redox_2 1.56
PF08448PAS_4 1.56
PF10706Aminoglyc_resit 0.78
PF01144CoA_trans 0.78
PF13561adh_short_C2 0.78
PF00149Metallophos 0.78
PF13523Acetyltransf_8 0.78
PF00581Rhodanese 0.78
PF08281Sigma70_r4_2 0.78
PF00383dCMP_cyt_deam_1 0.78
PF05721PhyH 0.78
PF00027cNMP_binding 0.78
PF14355Abi_C 0.78
PF03473MOSC 0.78
PF01435Peptidase_M48 0.78
PF13333rve_2 0.78
PF06271RDD 0.78
PF09261Alpha-mann_mid 0.78
PF00248Aldo_ket_red 0.78
PF01135PCMT 0.78
PF00313CSD 0.78
PF14489QueF 0.78
PF13683rve_3 0.78
PF00768Peptidase_S11 0.78
PF02518HATPase_c 0.78
PF08241Methyltransf_11 0.78
PF06386GvpL_GvpF 0.78
PF10604Polyketide_cyc2 0.78
PF01425Amidase 0.78
PF03466LysR_substrate 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 128 Family Scaffolds
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 0.78
COG0383Alpha-mannosidaseCarbohydrate transport and metabolism [G] 0.78
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.78
COG1714Uncharacterized membrane protein YckC, RDD familyFunction unknown [S] 0.78
COG1788Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunitLipid transport and metabolism [I] 0.78
COG2057Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunitLipid transport and metabolism [I] 0.78
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 0.78
COG2518Protein-L-isoaspartate O-methyltransferasePosttranslational modification, protein turnover, chaperones [O] 0.78
COG2519tRNA A58 N-methylase Trm61Translation, ribosomal structure and biogenesis [J] 0.78
COG4122tRNA 5-hydroxyU34 O-methylase TrmR/YrrMTranslation, ribosomal structure and biogenesis [J] 0.78
COG4670Acyl CoA:acetate/3-ketoacid CoA transferaseLipid transport and metabolism [I] 0.78
COG5285Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) familySecondary metabolites biosynthesis, transport and catabolism [Q] 0.78

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms91.41 %
UnclassifiedrootN/A8.59 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459007|GJ61VE201DGQDWNot Available532Open in IMG/M
3300000953|JGI11615J12901_12243934Not Available739Open in IMG/M
3300000956|JGI10216J12902_103444457All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1495Open in IMG/M
3300000956|JGI10216J12902_107982983All Organisms → cellular organisms → Bacteria1130Open in IMG/M
3300002077|JGI24744J21845_10002501All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3749Open in IMG/M
3300004479|Ga0062595_101348716All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium646Open in IMG/M
3300005181|Ga0066678_10029927All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2954Open in IMG/M
3300005181|Ga0066678_10823200All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria612Open in IMG/M
3300005335|Ga0070666_10229831All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1310Open in IMG/M
3300005339|Ga0070660_100323272All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1268Open in IMG/M
3300005347|Ga0070668_102095284All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria522Open in IMG/M
3300005354|Ga0070675_100534689All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1059Open in IMG/M
3300005367|Ga0070667_100936226All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium807Open in IMG/M
3300005437|Ga0070710_10066640All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2065Open in IMG/M
3300005440|Ga0070705_100745866All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia774Open in IMG/M
3300005445|Ga0070708_100042067All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4008Open in IMG/M
3300005445|Ga0070708_100350349All Organisms → cellular organisms → Bacteria1392Open in IMG/M
3300005455|Ga0070663_100489647All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1019Open in IMG/M
3300005467|Ga0070706_100171378All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2027Open in IMG/M
3300005467|Ga0070706_100644298All Organisms → cellular organisms → Bacteria984Open in IMG/M
3300005471|Ga0070698_100017238All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7609Open in IMG/M
3300005471|Ga0070698_100095764All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2946Open in IMG/M
3300005471|Ga0070698_100992826All Organisms → cellular organisms → Bacteria → Terrabacteria group787Open in IMG/M
3300005471|Ga0070698_101174724All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium716Open in IMG/M
3300005540|Ga0066697_10043094All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2540Open in IMG/M
3300005556|Ga0066707_10653355All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium665Open in IMG/M
3300005618|Ga0068864_100793153All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium930Open in IMG/M
3300005718|Ga0068866_10035107All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2446Open in IMG/M
3300005718|Ga0068866_10278365All Organisms → cellular organisms → Bacteria1035Open in IMG/M
3300006032|Ga0066696_10378956All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium923Open in IMG/M
3300006163|Ga0070715_10425853All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium744Open in IMG/M
3300006173|Ga0070716_100101364All Organisms → cellular organisms → Bacteria1766Open in IMG/M
3300006237|Ga0097621_100112143All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2305Open in IMG/M
3300006579|Ga0074054_12102051All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium763Open in IMG/M
3300009012|Ga0066710_100164438All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3109Open in IMG/M
3300009012|Ga0066710_100220909All Organisms → cellular organisms → Bacteria → Terrabacteria group2717Open in IMG/M
3300009012|Ga0066710_101165290Not Available1193Open in IMG/M
3300009038|Ga0099829_10336534All Organisms → cellular organisms → Bacteria1241Open in IMG/M
3300009089|Ga0099828_10752913Not Available874Open in IMG/M
3300009090|Ga0099827_10159608All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1851Open in IMG/M
3300009090|Ga0099827_11674251All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium554Open in IMG/M
3300009090|Ga0099827_11974850All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium507Open in IMG/M
3300009101|Ga0105247_10220650All Organisms → cellular organisms → Bacteria1283Open in IMG/M
3300009137|Ga0066709_103584278All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium563Open in IMG/M
3300009137|Ga0066709_104684355All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium500Open in IMG/M
3300009148|Ga0105243_10716614All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium977Open in IMG/M
3300009177|Ga0105248_10319763All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1748Open in IMG/M
3300009545|Ga0105237_11259666All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300010046|Ga0126384_10507020All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1041Open in IMG/M
3300010333|Ga0134080_10319558All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium701Open in IMG/M
3300010371|Ga0134125_10508311All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1334Open in IMG/M
3300010373|Ga0134128_10050790All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4800Open in IMG/M
3300010397|Ga0134124_10716933All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria991Open in IMG/M
3300010400|Ga0134122_12171217All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium598Open in IMG/M
3300010401|Ga0134121_10112900All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2289Open in IMG/M
3300010401|Ga0134121_10978145All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium829Open in IMG/M
3300011271|Ga0137393_10851373All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300012014|Ga0120159_1024886All Organisms → cellular organisms → Bacteria2143Open in IMG/M
3300012200|Ga0137382_10021542All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3710Open in IMG/M
3300012201|Ga0137365_10021808All Organisms → cellular organisms → Bacteria4969Open in IMG/M
3300012201|Ga0137365_10061830All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2827Open in IMG/M
3300012201|Ga0137365_10084451All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2391Open in IMG/M
3300012204|Ga0137374_10277001All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1390Open in IMG/M
3300012204|Ga0137374_10317206All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1271Open in IMG/M
3300012204|Ga0137374_10397725All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1096Open in IMG/M
3300012204|Ga0137374_10547148All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium891Open in IMG/M
3300012206|Ga0137380_10293638All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1457Open in IMG/M
3300012207|Ga0137381_10399224All Organisms → cellular organisms → Bacteria1199Open in IMG/M
3300012208|Ga0137376_10267202All Organisms → cellular organisms → Bacteria1484Open in IMG/M
3300012209|Ga0137379_11486039All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium579Open in IMG/M
3300012210|Ga0137378_10436040Not Available1214Open in IMG/M
3300012349|Ga0137387_11243335All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium524Open in IMG/M
3300012354|Ga0137366_10145289All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1787Open in IMG/M
3300012354|Ga0137366_10543269All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300012355|Ga0137369_10263655All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1296Open in IMG/M
3300012356|Ga0137371_10011123All Organisms → cellular organisms → Bacteria6955Open in IMG/M
3300012356|Ga0137371_11453429Not Available500Open in IMG/M
3300012360|Ga0137375_10045980All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4809Open in IMG/M
3300012363|Ga0137390_10010111All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia8296Open in IMG/M
3300012951|Ga0164300_10025186All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2115Open in IMG/M
3300012955|Ga0164298_10967341All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium626Open in IMG/M
3300012958|Ga0164299_10043940All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2043Open in IMG/M
3300012976|Ga0134076_10576376All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium523Open in IMG/M
3300013296|Ga0157374_10185391All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2034Open in IMG/M
3300013296|Ga0157374_10733446All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera → Tetrasphaera japonica → Tetrasphaera japonica T1-X71002Open in IMG/M
3300013501|Ga0120154_1126195All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium582Open in IMG/M
3300015359|Ga0134085_10315679Not Available689Open in IMG/M
3300017659|Ga0134083_10467641All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium560Open in IMG/M
3300018431|Ga0066655_10480335Not Available822Open in IMG/M
3300018433|Ga0066667_10088794All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2018Open in IMG/M
3300018433|Ga0066667_10233409All Organisms → cellular organisms → Bacteria1380Open in IMG/M
3300018433|Ga0066667_11552757Not Available587Open in IMG/M
3300019890|Ga0193728_1319777Not Available576Open in IMG/M
3300020004|Ga0193755_1160341All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300025903|Ga0207680_10081003All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2039Open in IMG/M
3300025906|Ga0207699_10978720All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300025910|Ga0207684_10052090All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3474Open in IMG/M
3300025911|Ga0207654_10201234All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1311Open in IMG/M
3300025916|Ga0207663_10617459All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium853Open in IMG/M
3300025916|Ga0207663_10866523All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium721Open in IMG/M
3300025917|Ga0207660_10235711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1440Open in IMG/M
3300025922|Ga0207646_10050522All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3721Open in IMG/M
3300025923|Ga0207681_10600143All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora910Open in IMG/M
3300025927|Ga0207687_10910596All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium753Open in IMG/M
3300025927|Ga0207687_11929507All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300025937|Ga0207669_10050197All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2492Open in IMG/M
3300025939|Ga0207665_10134900All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1756Open in IMG/M
3300025949|Ga0207667_10929330All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium860Open in IMG/M
3300026041|Ga0207639_10403090All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1232Open in IMG/M
3300026095|Ga0207676_10708991All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium976Open in IMG/M
3300026326|Ga0209801_1016423All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3703Open in IMG/M
3300026538|Ga0209056_10411850All Organisms → cellular organisms → Bacteria818Open in IMG/M
3300026547|Ga0209156_10148548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1137Open in IMG/M
3300026550|Ga0209474_10326449All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium880Open in IMG/M
3300027862|Ga0209701_10249410All Organisms → cellular organisms → Bacteria → Terrabacteria group1038Open in IMG/M
3300028714|Ga0307309_10128635All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium626Open in IMG/M
3300028778|Ga0307288_10501906All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium502Open in IMG/M
3300028784|Ga0307282_10199213All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium957Open in IMG/M
3300028807|Ga0307305_10501752Not Available544Open in IMG/M
3300028878|Ga0307278_10000042All Organisms → cellular organisms → Bacteria61045Open in IMG/M
3300028878|Ga0307278_10086155All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1414Open in IMG/M
3300028878|Ga0307278_10158932All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1011Open in IMG/M
3300028878|Ga0307278_10530483All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14513Open in IMG/M
3300028881|Ga0307277_10117103All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1140Open in IMG/M
3300028885|Ga0307304_10593824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium512Open in IMG/M
3300031170|Ga0307498_10113184All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria853Open in IMG/M
3300031720|Ga0307469_10688249All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium926Open in IMG/M
3300032174|Ga0307470_10134295All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1486Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil21.88%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere14.06%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.38%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil7.03%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.69%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.91%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.12%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.34%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.56%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.56%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.56%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.56%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.78%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.78%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.78%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.78%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.78%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459007Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cmEnvironmentalOpen in IMG/M
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002077Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3Host-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006579Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012014Permafrost microbial communities from Nunavut, Canada - A10_80cm_6MEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013501Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25MEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028714Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
L02_044797902170459007Grass SoilALAAFAVLLLNILLMMQRASEHSKSWPARFLRDLRYWDGRLPDDLDRHVRT
JGI11615J12901_1224393413300000953SoilMPHWLPPLAAASFTVLILNIALLVQRVRERSKSWSARFVREVRRWDGRLPDDLERHIQS*
JGI10216J12902_10344445723300000956SoilMSVRTDLRVLLLNIALMVQRVREQSKSWPARFLRDLRQWDGRLPDDLDRRVHT*
JGI10216J12902_10798298323300000956SoilMPGWLPPLAAAAFAVLILNIALFIQRARRRAQHWPRRFLHDLHRWDGRLPDDLGRRNDILS*
JGI24744J21845_1000250133300002077Corn, Switchgrass And Miscanthus RhizosphereMPHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDXHDKHFHT*
Ga0062595_10134871623300004479SoilMPHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHVHT*
Ga0066678_1002992723300005181SoilVAEKGVRLFHMPHWLPPFAAAAFAVLLLNIALMVQRVREQSKSWPARFLRDLRHWDGRLPDDLDRHVHT*
Ga0066678_1082320013300005181SoilLLLNIALIVQRVRERSKSWPAQFLRDLRDWDGRLPDGHDKHVHT*
Ga0070666_1022983123300005335Switchgrass RhizosphereMPHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHFHT*
Ga0070660_10032327223300005339Corn RhizosphereMPHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKPVHT*
Ga0070668_10209528413300005347Switchgrass RhizosphereHMPHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHGKHFHT
Ga0070675_10053468923300005354Miscanthus RhizosphereEGVRLFHMPHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHVHT*
Ga0070667_10093622623300005367Switchgrass RhizosphereMPHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHGKHFHT*
Ga0070710_1006664033300005437Corn, Switchgrass And Miscanthus RhizosphereMPHWFPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHFHT*
Ga0070705_10074586623300005440Corn, Switchgrass And Miscanthus RhizosphereFAVLLLNIALMVQRVRERSKSWPAQFLRALRDWDGRLPDDHDKHVHT*
Ga0070708_10004206733300005445Corn, Switchgrass And Miscanthus RhizosphereMPQWLLPLGAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKPVHI*
Ga0070708_10035034923300005445Corn, Switchgrass And Miscanthus RhizosphereMPHWLPPLAGASGAVLLLNIALMVTRIRERSKDWPARFLRDLRLWDGRVPDELDRGTHT*
Ga0070663_10048964713300005455Corn RhizosphereAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHVHT*
Ga0070706_10017137813300005467Corn, Switchgrass And Miscanthus RhizosphereMPHWLPPLAGASGAVLLLNIALMVTRIRERSKDWPARFLRDLRLWDGRVPDELDRGTHS*
Ga0070706_10064429823300005467Corn, Switchgrass And Miscanthus RhizosphereMPHWLPPLAAASCAVLLLNIALMVRRARDRSKDWPARFLHDLRLWDGRVPDELDRGTHT*
Ga0070698_10001723823300005471Corn, Switchgrass And Miscanthus RhizosphereMPHWLPPLAGASSAVLLLNIALMVTRIRERSKDWPARFLRDLRLWDGRVPDELDRGTHS*
Ga0070698_10009576413300005471Corn, Switchgrass And Miscanthus RhizosphereMPHWLPPLAAALFTVLILNIALMVQRVRARPKNWPARFLRELRHWDGRLPDDLERHIRT*
Ga0070698_10099282623300005471Corn, Switchgrass And Miscanthus RhizosphereGSFHMPHWLPPLAGASCAVLLLNIALMVRRARNRSKDWPARFLQDLRLWDGRVPDELDRGTHT*
Ga0070698_10117472423300005471Corn, Switchgrass And Miscanthus RhizosphereMPHWLPPLAAATSVVLLLNIALMAQRVREQSKGWPARFLRDLRHWDGRLSDDLDRHLRT*
Ga0066697_1004309443300005540SoilMPHWLPPLAAASFTVLILNIALMVQRVRERSKSWPARYVHELRHWDGRLPDDLERHIHT*
Ga0066707_1065335523300005556SoilMPHWLPPFAAAAFAVLLLNIALMVQRVREQSKSWPARFLRDLRHWDGRLPDDLDRHVHT*
Ga0068864_10079315323300005618Switchgrass RhizosphereMPHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKC*
Ga0068866_1003510713300005718Miscanthus RhizosphereMPHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLP
Ga0068866_1027836523300005718Miscanthus RhizosphereMPHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDGHDKHFHT*
Ga0066696_1037895613300006032SoilMPHWLPPLAAASFTVLILNIALMVQRVRERSKNWPARYVHELRHWDGRLPDDLERHIHT*
Ga0070715_1042585313300006163Corn, Switchgrass And Miscanthus RhizosphereMPHWFPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDH
Ga0070716_10010136433300006173Corn, Switchgrass And Miscanthus RhizosphereLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHVHT*
Ga0097621_10011214343300006237Miscanthus RhizosphereMPHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKQVHI*
Ga0074054_1210205123300006579SoilMPHWLPPLAAASFTVLILNIALMVQRVRARSKSWPARFARELRRWDGQLPDDL
Ga0066710_10016443813300009012Grasslands SoilAAAFAVLLLNIALMVQRVREQSKSWPARFLRDLRHWDGRLPDDLDRHVHT
Ga0066710_10022090913300009012Grasslands SoilMPPWLPPLAAAGFAVLLLNIALMVQRMRERSKSWPAQFLRDLRHWDGRLPDDHDKHVHT
Ga0066710_10116529013300009012Grasslands SoilMPQWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHVHI
Ga0099829_1033653423300009038Vadose Zone SoilMPHWLPPFAAAAFAVLLLNILLIVQRAHEQSKSWPARFLRDLRHWDGRLPDDLDRRIHT*
Ga0099828_1075291323300009089Vadose Zone SoilMPHWLPPFAAAAFAVLLLNILLMVQRAHEQSKSWPARFLRDLRHWDGRLPDDLDRHVRT*
Ga0099827_1015960823300009090Vadose Zone SoilMPNWLPPFAAAAFAVLLLNILLMVQRAREQSKSWPARFLRDLRHWDGRLPDDLDRHVHT*
Ga0099827_1167425113300009090Vadose Zone SoilLAAASFTVLILNIALMVQRVRARSKSWPARFLRELRHWDGRLPDDLERHIRT*
Ga0099827_1197485013300009090Vadose Zone SoilLAAAAFAVLLLNIALIVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHVHT*
Ga0105247_1022065013300009101Switchgrass RhizosphereMPHWFPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHVHT*
Ga0066709_10358427813300009137Grasslands SoilLAAGFAVLLLNIALMVQRVRERSKSWPAQFLRDLRHWDGRLPDDHDKHVHT*
Ga0066709_10468435523300009137Grasslands SoilMPEWLPPLAAASFTVLLLNIALLLQRGREQAEDWPARFLRDLRRWDGRLPDKLDRRAP*
Ga0105243_1071661423300009148Miscanthus RhizosphereAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHFHT*
Ga0105248_1031976313300009177Switchgrass RhizosphereLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHVHTERCW*
Ga0105237_1125966623300009545Corn RhizosphereLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHGKHFHT*
Ga0126384_1050702023300010046Tropical Forest SoilVSGWLPPFAAAAFAVLVLNIALLVQRALERAEDWPSRFMRDLRRWDGRLPAELDRGGGS*
Ga0134080_1031955823300010333Grasslands SoilLPHMPQWLPPLAAAAFAVLLLNIALIVQRVRERSKSWPAQFLRDLRDWDGRPPEDHDKHVHT*
Ga0134125_1050831123300010371Terrestrial SoilMAAAAFALLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHVHT*
Ga0134128_1005079023300010373Terrestrial SoilMPHWLPPLAAAAFAVLLLNIALMVQRGRERSKSWPAQFLRDLRDWDGRLPDDHGKHFHT*
Ga0134124_1071693333300010397Terrestrial SoilLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHFHT*
Ga0134122_1217121723300010400Terrestrial SoilLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDGHDKHFHT*
Ga0134121_1011290043300010401Terrestrial SoilLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKH
Ga0134121_1097814523300010401Terrestrial SoilLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHFHT*
Ga0137393_1085137323300011271Vadose Zone SoilMPHWLPPFAAAAFAVLLLNILLIVQRAHEQSKSWPARFLRDLRHWDGRLPDDLD
Ga0120159_102488643300012014PermafrostMPHWLPPFAAAAFAVLLLNIALMVQRAREQAKSWPARFLRDLRHWDGRLPDDFD*
Ga0137382_1002154243300012200Vadose Zone SoilLAAAAFAVLLLNIAFMVQQVRERSKSWPARFLRDLRDWDGRLPDDHDKHVHT*
Ga0137365_1002180823300012201Vadose Zone SoilMPHWLPPFAAAAFAVLLLNIALMVQRAREQSKSWPARFLRDLRHWDGRLPDDLDWPIHT*
Ga0137365_1006183023300012201Vadose Zone SoilMPHWLPPFAAAAFAVLLLNVALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHVHI*
Ga0137365_1008445123300012201Vadose Zone SoilLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHVHI*
Ga0137374_1027700123300012204Vadose Zone SoilFAVLLLNIALMVQRVRERSKSWPAQFLRDLRHWDGRLPDDHDKHVHT*
Ga0137374_1031720633300012204Vadose Zone SoilMPHWLPPFAAATFAVLLLNIALMVQRARDQSKSWPARFLRDLRQWDGRLPDDLD*
Ga0137374_1039772523300012204Vadose Zone SoilLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDEHVHI*
Ga0137374_1054714813300012204Vadose Zone SoilFAVLLLNIALMVQRVRERSKSWPAQFLRDLRHWDGRLPDDHDNHVRT*
Ga0137380_1029363823300012206Vadose Zone SoilMPHWLPPFAAAAFAVLLLNISSMVQRVRERSKSWPARFLRDLRHWDGRLPDDLDRHIHT*
Ga0137381_1039922423300012207Vadose Zone SoilLAAAAFAVLLLNIALMVQRVREQSKSWPAQFLRDLRDWDGRLPDDHDKHVHA*
Ga0137376_1026720223300012208Vadose Zone SoilMPHWLPPFGAAAFAVLLLNILLMVQRAREQSKSWPARFLRDLRHWDGRLPDDLDRHVRT*
Ga0137379_1148603923300012209Vadose Zone SoilMPHWLPPFAAAAFAVLLLNIALMVQRVREQSKSWPARFLRDLRHWDGRLPDDLDRHIHT*
Ga0137378_1043604033300012210Vadose Zone SoilAAFAVLLLNISSMVQRVRERSKSWPARFLRDLRHWDGRLPDDLDRHIHT*
Ga0137387_1124333513300012349Vadose Zone SoilLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRHWDGRLPDDHDKHVHT*
Ga0137366_1014528943300012354Vadose Zone SoilMPHWLPPFAAAAFAVLLLNIALMVQRAREQSKSWPARFLRDLRHWDGRLPDDLDWHIHT*
Ga0137366_1054326923300012354Vadose Zone SoilLAAAAFAVLLLNIALMVQRVREQSKSWPAQFLRDLRDWDGRLPDDHDKHVHI*
Ga0137369_1026365523300012355Vadose Zone SoilMPHWLPPFAAATFAVLLLNIALMVQRARDQSKSWPARFLRDLRHWDGRLPDDLD*
Ga0137371_10011123113300012356Vadose Zone SoilMPHWLPPFAAAAFAVLLLNIALMVQRAREQSKSWPARFLRDLRHWDGRLPDDLDRHVHT*
Ga0137371_1145342923300012356Vadose Zone SoilFAVLLLNIALMVQRAREQSKSWPSRFLRDLRHWDGRLPDDLDWPIHT*
Ga0137375_1004598053300012360Vadose Zone SoilLAAASFTVLILNIALMVQRVRERSKSWPARFVRELRRWDGRLPDDLERHIHT*
Ga0137390_1001011193300012363Vadose Zone SoilMPHWLPPLAAATSAVLLLNIALMAQRVREQSKSWPARFLRDLRHWDGRLPDDLDRHLRT*
Ga0164300_1002518623300012951SoilLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKF*
Ga0164298_1096734123300012955SoilLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKRVHT*
Ga0164299_1004394023300012958SoilLAAAAFAVLLLNIALIVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKRVHT*
Ga0134076_1057637613300012976Grasslands SoilMPQWLPPLAAAAFAVLLLNIALIVQRVRERSKSWPAQFLRDLRDWDGRPPEDHDKHVHT*
Ga0157374_1018539143300013296Miscanthus RhizospherePLAAAAFAVLLLNIALMVQRVREPSRSWPAQFLRDLRDWDGRLPDDHDKHVHT*
Ga0157374_1073344623300013296Miscanthus RhizosphereLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKC*
Ga0120154_112619513300013501PermafrostMPHWLPPFAAAAFAVLLLNILLMVQRAREQSKSWPARFLRDLRRWDGRLPDDLDRHVRT*
Ga0134085_1031567913300015359Grasslands SoilMPHWLPPFAAAAFAVLLLNILLMAQRAREHSKSWPARFLRDLRHWDGRLPDDHDKHVHI*
Ga0134083_1046764113300017659Grasslands SoilMPQWLPPLAAAAFAVLLLNIALIVQRVRERSKSWPAQFLRDLRDWDGRPPEDHEKHVHT
Ga0066655_1048033523300018431Grasslands SoilLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLSHWDGRLPDDHDKHVHT
Ga0066667_1008879433300018433Grasslands SoilMPHWLPPLAAASFTVLILNIALMVQRVRERSKSWPARYVHELRHWDGRLPDDLERHIHT
Ga0066667_1023340923300018433Grasslands SoilVAEKGVRLFHMPHWLPPFAAAAFAVLLLNIALMVQRVREQSKSWPARFLRDLRHWDGRLPDDLDRHVHT
Ga0066667_1155275723300018433Grasslands SoilPGAITLPPFAAAAFAVLLLNILLMVQRAREQSKSWRTRFLRDLRHWDGRLPDDLDRHVRT
Ga0193728_131977713300019890SoilMPHWLLPFAAATFAVLLLNIALMVQRAREQSKSWPARFLRDLRHWDGRLPDDLD
Ga0193755_116034133300020004SoilMPHWLPPFAAAASAVLVLNIALMVQRVREQSKTWPARFLRDLRRWDGRLPDDLDQ
Ga0207680_1008100313300025903Switchgrass RhizosphereMPHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHGKHFHT
Ga0207699_1097872023300025906Corn, Switchgrass And Miscanthus RhizosphereMPHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHVHT
Ga0207684_1005209023300025910Corn, Switchgrass And Miscanthus RhizosphereMPHWLPPLAGASGAVLLLNIALMVTRIRERSKDWPARFLRDLRLWDGRVPDELDRGTHS
Ga0207654_1020123413300025911Corn RhizospherePEGVRLFHMPHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHFHT
Ga0207663_1061745923300025916Corn, Switchgrass And Miscanthus RhizosphereGVRLFQMPHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHFHT
Ga0207663_1086652323300025916Corn, Switchgrass And Miscanthus RhizosphereMPHWFPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRL
Ga0207660_1023571113300025917Corn RhizosphereHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHFHT
Ga0207646_1005052213300025922Corn, Switchgrass And Miscanthus RhizosphereMPQWLLPLGAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLP
Ga0207681_1060014323300025923Switchgrass RhizosphereMPHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDGHDKHFHT
Ga0207687_1091059623300025927Miscanthus RhizosphereAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDGHDKHFHT
Ga0207687_1192950723300025927Miscanthus RhizosphereMPHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHGK
Ga0207669_1005019713300025937Miscanthus RhizosphereVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHVHT
Ga0207665_1013490033300025939Corn, Switchgrass And Miscanthus RhizosphereLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHVHT
Ga0207667_1092933023300025949Corn RhizosphereVRLFQMPHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHFHT
Ga0207639_1040309033300026041Corn RhizosphereSEGVRLFQMPHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHFHT
Ga0207676_1070899123300026095Switchgrass RhizosphereMPHWLPPLAAAAFAVLLLNIALMVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKC
Ga0209801_101642333300026326SoilMPHWLPPFAAAAFAVLLLNIALMVQRVREQSKSWPARFLRDLRHWDGRLPDDLDRHVHT
Ga0209056_1041185013300026538SoilMPQWLPPLAAAAFAVLLLNIALIVQRVRERSKSWPAQFLRDLRDWDGRPPEDHDKHVHT
Ga0209156_1014854833300026547SoilMPHWLPPLAAASFTVLILNIALMVQRVRERSKSWPARYVHELRHWDGRLPD
Ga0209474_1032644923300026550SoilMPHWLPPLAAASFTVLILNIALMVQRVRERSKNWPARYVHELRHWDGRLPDDLERHIHT
Ga0209701_1024941023300027862Vadose Zone SoilMPHWLPPFAAAAFAVLLLNILLIVQRAHEQSKSWPARFLRDLRHWDGRLPDDLDRRIHT
Ga0307309_1012863523300028714SoilDWLPPLAAAASAVLLLNIALMVQRLREQSKSWPARFLRDLCHWDGRLPDDLDQHVHT
Ga0307288_1050190613300028778SoilMPDWLPPLAAAASAVLLLNIALMVQRLREQSKSWPARFLRDLCHWDGRLPDDLDQHVHT
Ga0307282_1019921313300028784SoilMPDWLPPFAAAAFAVLLLNIALMVQRLREQSKSWPARFLRDLCHWDGRLPDDLDQHVHT
Ga0307305_1050175213300028807SoilFAVLLLNIALMVQRAREQSKSWPARFLRDLRHWDGRLPDDLDRHVRT
Ga0307278_10000042173300028878SoilMPNWLPPFAAAAFAVLLLNVLLMVQRAREQSKSWPARFLRDLRHWDGRLPDDLDRRVRT
Ga0307278_1008615533300028878SoilMPHWLPPFAAAAFAVLLLNILLMVQRAREQSKSWPARFLRDLRHWDGRLPDDLDRPVRT
Ga0307278_1015893213300028878SoilMPHWLPPFAAATFAVLLLNIALMVQRARDQSKSWPARFLRDLRHWDGRLPDDLD
Ga0307278_1053048313300028878SoilVLLLNIALIVQRVRERSKSWPAQFLRDLRDWDGRLPDHHDKHVHI
Ga0307277_1011710323300028881SoilMPHWLPPFAAATFAVLLLNIALMVQRAREQSKSWPARFLRDLRHWDGRLPDDLD
Ga0307304_1059382413300028885SoilWLPPLAAAASAVLLLNIALMVQRLREQSKSWPARFLRDLCHWDGRLPDDLDQHVHT
Ga0307498_1011318423300031170SoilMPHWLPPLAAAAFAVLLLNIALIVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDNHVHT
Ga0307469_1068824913300031720Hardwood Forest SoilPPMAAAAFAVLLLNIALMVQQVRERSKSWPAQFLRDLRDWDGRLPDDHDKHVHT
Ga0307470_1013429523300032174Hardwood Forest SoilMPHWLPPLAAAAFAVLLLNIALKVQRVRERSKSWPAQFLRDLRDWDGRLPDDHDKHVHT

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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