Metagenome Family F065284

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065284
Family Type	Metagenome
Number of Sequences	127
Average Sequence Length	55 residues
Representative Sequence	MDPQDPTSTLFSLDDATESIERESLDEGISAMMDVLNQARGVLRDVIVPTGRVSA
Number of Associated Samples	57
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	57.02 %
% of genes near scaffold ends (potentially truncated)	34.65 %
% of genes from short scaffolds (< 2000 bps)	95.28 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (98.425 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere (95.276 % of family members)
Environment Ontology (ENVO)	Unclassified (96.063 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (96.063 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.42% β-sheet: 0.00% Coil/Unstructured: 44.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF13011	LZ_Tnp_IS481	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
All Organisms	root	All Organisms	1.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
cellular organisms	root	All Organisms → cellular organisms	1.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
Andropogonodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
Andropogoneae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
Saccharinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
Miscanthus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.43 %
Miscanthus lutarioriparius	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300013296\|Ga0157374_12443351	Not Available	550	Open in IMG/M
3300013297\|Ga0157378_11290330	Not Available	771	Open in IMG/M
3300013297\|Ga0157378_12813644	Not Available	539	Open in IMG/M
3300015269\|Ga0182113_1053377	Not Available	605	Open in IMG/M
3300015269\|Ga0182113_1081061	Not Available	532	Open in IMG/M
3300015274\|Ga0182188_1004263	Not Available	1009	Open in IMG/M
3300015274\|Ga0182188_1011853	Not Available	770	Open in IMG/M
3300015274\|Ga0182188_1036754	Not Available	579	Open in IMG/M
3300015276\|Ga0182170_1032599	Not Available	645	Open in IMG/M
3300015276\|Ga0182170_1046246	Not Available	585	Open in IMG/M
3300015277\|Ga0182128_1021631	Not Available	725	Open in IMG/M
3300015279\|Ga0182174_1061232	Not Available	558	Open in IMG/M
3300015279\|Ga0182174_1075397	Not Available	523	Open in IMG/M
3300015279\|Ga0182174_1075756	Not Available	523	Open in IMG/M
3300015281\|Ga0182160_1007352	Not Available	986	Open in IMG/M
3300015281\|Ga0182160_1068880	Not Available	534	Open in IMG/M
3300015282\|Ga0182124_1080938	Not Available	505	Open in IMG/M
3300015283\|Ga0182156_1074421	Not Available	529	Open in IMG/M
3300015287\|Ga0182171_1035195	Not Available	658	Open in IMG/M
3300015288\|Ga0182173_1029568	Not Available	684	Open in IMG/M
3300015288\|Ga0182173_1033929	Not Available	658	Open in IMG/M
3300015288\|Ga0182173_1076327	Not Available	522	Open in IMG/M
3300015292\|Ga0182141_1060250	Not Available	575	Open in IMG/M
3300015292\|Ga0182141_1071482	Not Available	547	Open in IMG/M
3300015292\|Ga0182141_1083116	Not Available	522	Open in IMG/M
3300015292\|Ga0182141_1090997	Not Available	508	Open in IMG/M
3300015294\|Ga0182126_1075684	Not Available	541	Open in IMG/M
3300015295\|Ga0182175_1042704	Not Available	646	Open in IMG/M
3300015295\|Ga0182175_1046990	Not Available	628	Open in IMG/M
3300015295\|Ga0182175_1097010	Not Available	504	Open in IMG/M
3300015298\|Ga0182106_1014525	Not Available	893	Open in IMG/M
3300015298\|Ga0182106_1022937	Not Available	783	Open in IMG/M
3300015298\|Ga0182106_1087361	Not Available	529	Open in IMG/M
3300015300\|Ga0182108_1091608	Not Available	527	Open in IMG/M
3300015300\|Ga0182108_1099650	Not Available	513	Open in IMG/M
3300015302\|Ga0182143_1040439	Not Available	669	Open in IMG/M
3300015302\|Ga0182143_1076567	Not Available	554	Open in IMG/M
3300015305\|Ga0182158_1064050	Not Available	584	Open in IMG/M
3300015307\|Ga0182144_1034293	Not Available	710	Open in IMG/M
3300015307\|Ga0182144_1102756	Not Available	511	Open in IMG/M
3300015308\|Ga0182142_1033972	Not Available	726	Open in IMG/M
3300015308\|Ga0182142_1093935	Not Available	536	Open in IMG/M
3300015308\|Ga0182142_1113837	Not Available	505	Open in IMG/M
3300015314\|Ga0182140_1085582	Not Available	554	Open in IMG/M
3300015322\|Ga0182110_1073993	Not Available	593	Open in IMG/M
3300015341\|Ga0182187_1086157	Not Available	680	Open in IMG/M
3300015341\|Ga0182187_1135398	Not Available	580	Open in IMG/M
3300015341\|Ga0182187_1189204	Not Available	513	Open in IMG/M
3300015342\|Ga0182109_1048952	Not Available	877	Open in IMG/M
3300015342\|Ga0182109_1094440	Not Available	694	Open in IMG/M
3300015342\|Ga0182109_1108864	Not Available	659	Open in IMG/M
3300015343\|Ga0182155_1100758	Not Available	674	Open in IMG/M
3300015343\|Ga0182155_1169974	Not Available	559	Open in IMG/M
3300015344\|Ga0182189_1194045	Not Available	536	Open in IMG/M
3300015345\|Ga0182111_1115197	Not Available	672	Open in IMG/M
3300015345\|Ga0182111_1144567	Not Available	617	Open in IMG/M
3300015345\|Ga0182111_1161596	Not Available	592	Open in IMG/M
3300015345\|Ga0182111_1164325	Not Available	588	Open in IMG/M
3300015346\|Ga0182139_1199244	Not Available	546	Open in IMG/M
3300015346\|Ga0182139_1214140	Not Available	530	Open in IMG/M
3300015347\|Ga0182177_1082329	Not Available	764	Open in IMG/M
3300015347\|Ga0182177_1088592	Not Available	744	Open in IMG/M
3300015347\|Ga0182177_1173661	Not Available	578	Open in IMG/M
3300015347\|Ga0182177_1222897	Not Available	525	Open in IMG/M
3300015351\|Ga0182161_1128219	Not Available	674	Open in IMG/M
3300015351\|Ga0182161_1158636	Not Available	620	Open in IMG/M
3300015351\|Ga0182161_1166707	Not Available	608	Open in IMG/M
3300015355\|Ga0182159_1050857	Not Available	1117	Open in IMG/M
3300015355\|Ga0182159_1154729	Not Available	717	Open in IMG/M
3300015355\|Ga0182159_1277557	Not Available	557	Open in IMG/M
3300015361\|Ga0182145_1084440	Not Available	665	Open in IMG/M
3300015361\|Ga0182145_1124420	Not Available	584	Open in IMG/M
3300015361\|Ga0182145_1134617	Not Available	569	Open in IMG/M
3300015361\|Ga0182145_1183909	Not Available	512	Open in IMG/M
3300017404\|Ga0182203_1073277	Not Available	653	Open in IMG/M
3300017404\|Ga0182203_1073393	Not Available	653	Open in IMG/M
3300017404\|Ga0182203_1080465	Not Available	634	Open in IMG/M
3300017407\|Ga0182220_1011334	Not Available	924	Open in IMG/M
3300017407\|Ga0182220_1075573	Not Available	558	Open in IMG/M
3300017407\|Ga0182220_1101887	Not Available	511	Open in IMG/M
3300017409\|Ga0182204_1031129	Not Available	753	Open in IMG/M
3300017409\|Ga0182204_1057576	Not Available	629	Open in IMG/M
3300017409\|Ga0182204_1105010	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	523	Open in IMG/M
3300017410\|Ga0182207_1076748	Not Available	665	Open in IMG/M
3300017410\|Ga0182207_1135858	Not Available	550	Open in IMG/M
3300017410\|Ga0182207_1154546	Not Available	526	Open in IMG/M
3300017410\|Ga0182207_1155246	Not Available	525	Open in IMG/M
3300017411\|Ga0182208_1007142	Not Available	1182	Open in IMG/M
3300017411\|Ga0182208_1020345	Not Available	876	Open in IMG/M
3300017413\|Ga0182222_1039883	Not Available	652	Open in IMG/M
3300017415\|Ga0182202_1110272	Not Available	543	Open in IMG/M
3300017420\|Ga0182228_1069599	Not Available	630	Open in IMG/M
3300017424\|Ga0182219_1079148	Not Available	601	Open in IMG/M
3300017425\|Ga0182224_1030911	Not Available	847	Open in IMG/M
3300017425\|Ga0182224_1129641	Not Available	545	Open in IMG/M
3300017427\|Ga0182190_1095083	Not Available	608	Open in IMG/M
3300017427\|Ga0182190_1100059	Not Available	598	Open in IMG/M
3300017433\|Ga0182206_1126070	Not Available	542	Open in IMG/M
3300017433\|Ga0182206_1159012	Not Available	502	Open in IMG/M
3300017436\|Ga0182209_1058350	Not Available	713	Open in IMG/M
3300017438\|Ga0182191_1127994	Not Available	568	Open in IMG/M
3300017442\|Ga0182221_1026082	Not Available	889	Open in IMG/M
3300017442\|Ga0182221_1071495	Not Available	658	Open in IMG/M
3300017442\|Ga0182221_1078115	Not Available	641	Open in IMG/M
3300017442\|Ga0182221_1082258	Not Available	631	Open in IMG/M
3300017442\|Ga0182221_1114715	Not Available	570	Open in IMG/M
3300017442\|Ga0182221_1116883	Not Available	566	Open in IMG/M
3300017442\|Ga0182221_1137260	Not Available	538	Open in IMG/M
3300017442\|Ga0182221_1152270	Not Available	521	Open in IMG/M
3300017443\|Ga0182193_1061095	Not Available	747	Open in IMG/M
3300017443\|Ga0182193_1105425	Not Available	625	Open in IMG/M
3300017443\|Ga0182193_1141979	Not Available	564	Open in IMG/M
3300017682\|Ga0182229_1044340	Not Available	755	Open in IMG/M
3300017683\|Ga0182218_1112460	Not Available	555	Open in IMG/M
3300017684\|Ga0182225_1123806	Not Available	528	Open in IMG/M
3300017685\|Ga0182227_1073316	Not Available	635	Open in IMG/M
3300017690\|Ga0182223_1009419	Not Available	1008	Open in IMG/M
3300017690\|Ga0182223_1036330	Not Available	705	Open in IMG/M
3300021060\|Ga0182232_1086056	Not Available	510	Open in IMG/M
3300025938\|Ga0207704_10302787	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300026118\|Ga0207675_100999765	Not Available	855	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	96.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.57%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	96.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.57%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	96.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.57%

Habitat	Taxonomy	Distribution
Miscanthus Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere	95.28%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.79%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015269	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015274	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015276	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015277	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015279	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015281	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015282	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015283	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015287	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015288	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015292	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015294	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015295	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015298	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015300	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015302	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015305	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015307	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015308	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015314	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015322	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015341	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015342	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015343	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015344	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015345	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015346	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015347	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015351	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015355	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015361	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300017404	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017407	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017409	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017410	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017411	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017413	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017415	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017420	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017424	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017425	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017427	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017433	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017436	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017438	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017442	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017443	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017682	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017683	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017684	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017685	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017690	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300021060	Phyllosphere microbial comminities from miscanthus, Michigan, USA - G6R3_NF_07NOV2016_LD2 MG	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0157374_124433511	3300013296	Miscanthus Rhizosphere	DPQDPTSTLFSLDVAVESMERESLSKGISAVLEALNQAWGALRDVVVPTGRVFT*
Ga0157378_112903302	3300013297	Miscanthus Rhizosphere	MDPQDPTSTLFSLDDATESIERESLDDGISAMMDVLNQARGILNDIIIPTG*
Ga0157378_128136441	3300013297	Miscanthus Rhizosphere	PRDPTSTLFSLDDATKSVERGSLDEGISAMMDVLDQARVILHDVIIPNGWVFA*
Ga0182113_10533771	3300015269	Miscanthus Phyllosphere	MRGESLLQWMDPQDPTSILFSLDDATESIERESLNEGISAMMEVLNQARGVLRDVVVPTSRVST*
Ga0182113_10810612	3300015269	Miscanthus Phyllosphere	MDPQDPTLILFSLDDATESIEGESLNEGILAMLEVLNQAMGVLRDIVIPTGRVST*
Ga0182188_10042631	3300015274	Miscanthus Phyllosphere	MDPQDPTSILFSLDDATGSIERESLNEGISAMLEVLNQARGVLCDVIIPIG*
Ga0182188_10118532	3300015274	Miscanthus Phyllosphere	MWGEPLLQWTDPQDPTSTLFSLDDTVESMERESLNEGISAMLEALNQARGALHDAVIPTGQVFT*
Ga0182188_10367541	3300015274	Miscanthus Phyllosphere	HTLVRGEPLLRWIDPQDPTSTLFSLDDAADSMERESLNEGISAVLEALNQARGALRDVVIPIGRVST*
Ga0182170_10325991	3300015276	Miscanthus Phyllosphere	MDPRDPTSILFLLDDATESIERESLNGGILAMVDVLNQARGILRDIIVLTGWVSA
Ga0182170_10462461	3300015276	Miscanthus Phyllosphere	MDPQDPTSILFLLNDATESIERDHLNEEISAMMEDLNQARGILRDVFVLTG*
Ga0182128_10216311	3300015277	Miscanthus Phyllosphere	MDPQDLTSTLFSLDEAAKSIERGSLDEGISAMMCVLDQARVILCDIIIPNGWVSA*
Ga0182174_10612321	3300015279	Miscanthus Phyllosphere	MSTLFSLDDAIKSIERGSLDEGISAMMGVLDQARVVLRDVIVPNGRVSA*
Ga0182174_10753971	3300015279	Miscanthus Phyllosphere	MDPQDPTSILFSLDDATESIERESLNEGISAMMDVLNQARGILCDVIIPNGRVFA*
Ga0182174_10757561	3300015279	Miscanthus Phyllosphere	MDPQDPTSILFSLDDATKSIEQESLNGGILAMVDVLNQARGVLRDIIVPTGRVSA*
Ga0182160_10073521	3300015281	Miscanthus Phyllosphere	MDPQDPTSILFSLDDATESIERESLDGGISAMMDVLNLARRVLRDIIIPTGRVSA*
Ga0182160_10688801	3300015281	Miscanthus Phyllosphere	MDPQDPTSTLFSLDDATESIERESLDEGISAMMDVLNQARGVLRDVIVPTGRVSA*
Ga0182124_10809382	3300015282	Miscanthus Phyllosphere	MSTLFSLDDATKSIEQEILNEGISAVLEALNQARGALRDVVVPTGWVFT*
Ga0182156_10744212	3300015283	Miscanthus Phyllosphere	MDPQDPTSTLFSLDDAAMSIERGSLDEGISVMMGVLDQARVILRDIIIPNGRVSV*
Ga0182171_10351952	3300015287	Miscanthus Phyllosphere	MDPCDPTSTLFLLDDATESIERESLDEGISAVMDVLNHAKGVLHDIIVPTSQVSA*
Ga0182173_10295682	3300015288	Miscanthus Phyllosphere	MVPQDPTSILFSLDDATESIEWESLNEGISAMMDVLNQAKDVVREVIVPTGRVSA*
Ga0182173_10339292	3300015288	Miscanthus Phyllosphere	MDPQDPTSTLVSLDDATESIEWESLDEGILAMMDVLNWAKGVLRDVIVPNGWVSA*
Ga0182173_10763272	3300015288	Miscanthus Phyllosphere	MDPQDPTSTLFSLDDAAESIERGSLDEWISAMMGVLDQARVILRDVIVRNGRVFT*
Ga0182141_10602501	3300015292	Miscanthus Phyllosphere	MDPQDPTLTLFSLDDAAESMERGSLDEGISVMMGVLDQARVVLRDVIIPNGRVSA*
Ga0182141_10714821	3300015292	Miscanthus Phyllosphere	MDLQDPTLTLFSLDDTIESMERESLNEGILAMLEAQNQARGALRDVMFPTGQVFT*
Ga0182141_10831161	3300015292	Miscanthus Phyllosphere	MAPQDPTSTLFSLDDATESIEWESLNRGISAMMDALNKARGILRDVIIPTGPVSA
Ga0182141_10909971	3300015292	Miscanthus Phyllosphere	MDPRDPTSILFSLDDAIESIERESLNGGILAMMDVLNQSRGVLRDIIIPTGRVSA*
Ga0182126_10528052	3300015294	Miscanthus Phyllosphere	MLILFSLDDATESMERENLDIGLSAMMDALSQARVVLRDVIVPTSRVSA*
Ga0182126_10756841	3300015294	Miscanthus Phyllosphere	MDPQDPTSILFSLDDCTESIERESLNKGISAMMEVLNQARGILRDVVVPTGWVST*
Ga0182175_10427041	3300015295	Miscanthus Phyllosphere	MDPQDPTSILFSLDDATESIERESLDEGISAMMDVLNQARGVLRDVIIPTGRLFA*
Ga0182175_10469901	3300015295	Miscanthus Phyllosphere	MDPQDPTSTLFSLDDAVESIERGSLDEGISAMMGVLDQARVVLRDVIIPNGRVSA*
Ga0182175_10970102	3300015295	Miscanthus Phyllosphere	LRWIDPQDPTSTLFSLDDASESIERESLNEGISIVLEALNQASGTLCDVIIPTGRVFA*
Ga0182106_10145252	3300015298	Miscanthus Phyllosphere	MSTLFSLDDATMSIERGSLDEGISAMIGVLDQARVILRDVIVPNGRVSA*
Ga0182106_10229371	3300015298	Miscanthus Phyllosphere	MAPQDPTTALFSLDDAAESIEWGSLDEGISTMMGILDQAQVILRDVIVPNGRVSV*
Ga0182106_10873611	3300015298	Miscanthus Phyllosphere	MDPQDPSSILFSLDDAIESIEWESLNEGISAMMEVLNQARGVLRNVIIPTGWVST*
Ga0182108_10916081	3300015300	Miscanthus Phyllosphere	MDPQDPTSILFSLNDATESIERESLNEGILAMMDVLNQARGVLHDVIIPTGQVPA*
Ga0182108_10996502	3300015300	Miscanthus Phyllosphere	GGSRSPTQGESLLQWIDPHDPTSILFSLDDATKSIERDSLNKGILAMMEILNQARGVLRDVIIPTGRVSP*
Ga0182143_10404391	3300015302	Miscanthus Phyllosphere	MDPKDPTSILFSLDDANESIERESLNEGISAMMEVLNQARGIQHDVIIPTGRVST*
Ga0182143_10765671	3300015302	Miscanthus Phyllosphere	LTLFSLDDATECIERESLKVGFSAMKDALSQTRGVLCDIIVPTGRVSA*
Ga0182158_10640501	3300015305	Miscanthus Phyllosphere	MDPQDPTSILFSLNDATESIERESLNEGISAMMKVLNQARGVLRDVIIPTGRVST*
Ga0182144_10342933	3300015307	Miscanthus Phyllosphere	LQWMDPRDLASILFSLDDATESILWESLNEGISAMLEVLNQARGVLRDVVVPNGQVSA*
Ga0182144_11027562	3300015307	Miscanthus Phyllosphere	PILFSLDDDTESTERESLNGGILAMMDVLNQARGILRDIIVPIGRVST*
Ga0182142_10339721	3300015308	Miscanthus Phyllosphere	ARGEPLLQWMDPQDPTSILFSLNDATKSIERESLNEGISAMLESLNQDRGALCDVIIPTDRVFT*
Ga0182142_10939351	3300015308	Miscanthus Phyllosphere	MDPQDPTSILFSLDDATESIERKSLDEGISAVMDVLNHARGILHDII
Ga0182142_11138372	3300015308	Miscanthus Phyllosphere	MVPQDPTLTIFSLDDASESMERESLNIGLSDMMDAWSQARSVLRDVIIPTGRVYA*
Ga0182140_10855821	3300015314	Miscanthus Phyllosphere	MDPQDPTSTLFSLNDATKSIERGSLDEGISAMMGVLDQAQVILRDVIVPNGRVSA*
Ga0182110_10739932	3300015322	Miscanthus Phyllosphere	MELQDPTSILFSLNDATESIEWESLNEGISALLEALNQARGVLRDVVIPTGQVST*
Ga0182187_10861573	3300015341	Miscanthus Phyllosphere	GEPPLHWMEPQDPTSTLFSLDDAAESIEQGSLDEGISEMMAVLDQAWVILRDIIIPNGWVSA*
Ga0182187_11353982	3300015341	Miscanthus Phyllosphere	MDPRDPTSILFSLDDAIESIERESLNEGISAVLEALNQARGALHNIVIPTCWVFT*
Ga0182187_11892042	3300015341	Miscanthus Phyllosphere	MDPQDPTSILFSLNDATESIERESLNEGISTVLEALNQARGALRDIVVSTGQVFT*
Ga0182109_10489523	3300015342	Miscanthus Phyllosphere	DPQDPTSTLFSLDDAAESIERGSLDQGISAMMGVLDQARVILRDVIVPNGWVSA*
Ga0182109_10944402	3300015342	Miscanthus Phyllosphere	MSILFSLDDATESIERESLNEGILAMLEALNQAKGVLRDVVIPTGRVST*
Ga0182109_11088641	3300015342	Miscanthus Phyllosphere	MSTLFSLDDATKSIERGSLDEGILAMMDVLDQARVILRDVIVPNGRVSA*
Ga0182155_11007582	3300015343	Miscanthus Phyllosphere	MDPQDPTSILFSLDDATESIERKSLDEGISAVMDVLNHAKGVLHDIIVPTSQVSA*
Ga0182155_11699741	3300015343	Miscanthus Phyllosphere	LLQWLDPRDPTSILFSLDDATKSIERESLDGGISAMMDVLNQARGILRDVIISTGR
Ga0182155_12236611	3300015343	Miscanthus Phyllosphere	FSLDDATKSIEWGSLDEGISAMMGVQDQAQVVLRDVIVPNGQVSA*
Ga0182189_11940451	3300015344	Miscanthus Phyllosphere	MDPQDPTSTLFSLDDAAMSIERGSLDKGISAMMGVLDQARVILRDVIVPNSRVSA*
Ga0182111_11151971	3300015345	Miscanthus Phyllosphere	MDPHDPTSILFSLDDATERIEWESLNEGISAMLEVLNQRRSVLRDVIVPTGQVLT*
Ga0182111_11445671	3300015345	Miscanthus Phyllosphere	MVAQDPTLVLFSLDDATESIERGSLDEGISVMMGVLDQAWVILRDVIIPNGQVSV*
Ga0182111_11615961	3300015345	Miscanthus Phyllosphere	MDPQDPTSILFSLDDATESIERESLDGGILAMMDVLNQTRGILRDIIIPTGRVSA*
Ga0182111_11643251	3300015345	Miscanthus Phyllosphere	QDPTSILFSLDDATGSIERESLNEGISAMLEVLNQARGVLHDVVVPTGWVFT*
Ga0182139_10611681	3300015346	Miscanthus Phyllosphere	MAPQDPTSTLFSLDDVTESIERECLDIGFLAMMDALSQARGI
Ga0182139_10961552	3300015346	Miscanthus Phyllosphere	MLGGSHSPSRGEPLLQWLDLQDPTSILFLLDDATESIEWESLNEGISVMLEALNQAMGVL
Ga0182139_11992442	3300015346	Miscanthus Phyllosphere	MSILFSLDDATKSIERESLNEGISAMLEVLNQARGVLRNIVVPAGQVST*
Ga0182139_12141401	3300015346	Miscanthus Phyllosphere	LFSLDDATESIERESLNEGISAMMEVLNQDRGILRDVIVPTGRVST*
Ga0182177_10823292	3300015347	Miscanthus Phyllosphere	MDPRDPTSLLFSLDDATKSIERESLNEGISAVLEALNQAQGALCDIIIPTGRVFT*
Ga0182177_10885921	3300015347	Miscanthus Phyllosphere	PQDPTSTLFSLDDATESIELESLNEGILAMMDVLNQARGVLRDVVVPTSWVSA*
Ga0182177_11736612	3300015347	Miscanthus Phyllosphere	MDPPDPTLILFSLDDATESIERESLNEGISAMMDVLNQARGVLCDVIIH
Ga0182177_12228971	3300015347	Miscanthus Phyllosphere	QWMDPQDPTSILFSLDDATESIERESLNGGISAMVDVLNKARGILRDVIVTIGQAFA*
Ga0182161_11282193	3300015351	Miscanthus Phyllosphere	MDPQDPTSILFSLNDATKSIERESLNKGILAMMEVLNQAMGILRDLIVPTGRVSA*
Ga0182161_11586361	3300015351	Miscanthus Phyllosphere	MDLQDPTSTLFSLDDGAESIERGSLDEGISAMKGVLDEARVVLRDVIVPNGRVST*
Ga0182161_11667072	3300015351	Miscanthus Phyllosphere	MAPQDPTTTLFSLDDAAESIEWGSLDEGISTMMGILDQAQVILHNIIIPNGRVSV*
Ga0182159_10508573	3300015355	Miscanthus Phyllosphere	MAPQDPTSTLFLLDDASESMERESLDIGFSAMMDALSQARGVLRDIIIPTGRVCA*
Ga0182159_11547291	3300015355	Miscanthus Phyllosphere	MDPHDPTSILFSLDDATERIEWESLNEGISAMLEALNQARGVLRDVVVPTGRVFI*
Ga0182159_12775571	3300015355	Miscanthus Phyllosphere	MDSQDPSSILFSLDDATESIERESLNEEISAMLEVLNQARGVLRDVIIPTS
Ga0182145_10844402	3300015361	Miscanthus Phyllosphere	MDLQDLTSILFSLNDATESIERESLNEEISALLEALNQARVVLRDVVIPTGQVST*
Ga0182145_11244201	3300015361	Miscanthus Phyllosphere	TLFSLDDATKSIEWGSLDEGISAMMGVLDQAGVVLRDVIVSNGRVST*
Ga0182145_11346172	3300015361	Miscanthus Phyllosphere	WMDPQDPTSILFSLDDATESIERESLNEGISAMLEALNQARGVLRDVVVPTGRVST*
Ga0182145_11839091	3300015361	Miscanthus Phyllosphere	PARGELLLQWMDPRDPTSTLFSLDDATKSVERGSLDEGISTMMDVLDQARVILRDIIVPNGLVSA*
Ga0182203_10732772	3300017404	Miscanthus Phyllosphere	MRGEPPLQWMAPQDPMVTLFSLDDATESMERESLNIGFSTMKDALSQARGVLRDVIIPNG
Ga0182203_10733932	3300017404	Miscanthus Phyllosphere	WMDPRDPTSTLFSLNDATESIERESLNEWISAMMDVLNQARGVLRDVIVPTS
Ga0182203_10804651	3300017404	Miscanthus Phyllosphere	MDPQDPASTLFSLDDATESIERGSLDEGISAMMGVLNKARVVLRDVIVPNGRVSA
Ga0182220_10113341	3300017407	Miscanthus Phyllosphere	MDPQDPTSILFSLNDATESIERESLNQGITTMMEVLNQARGVLRNIIIPTGWVST
Ga0182220_10755731	3300017407	Miscanthus Phyllosphere	EPPLRWMVPQDPTSTLFSLDDASESMERESLDIGFSAMMDALSQARGILRDVIIPTGQVC
Ga0182220_11018871	3300017407	Miscanthus Phyllosphere	MDPQDPTSTLFSLDDATESIERESLNGGILAMMDVLNEARGILRDVIVPTGRVFA
Ga0182204_10311292	3300017409	Miscanthus Phyllosphere	MASQDPMLTLFSLDDAAESIERGSLDEGISAMMGVLDQARVVLRDVIVRNGRVSA
Ga0182204_10575762	3300017409	Miscanthus Phyllosphere	WGEPPLQWMAAEDPTSALFLLDDAVESMERENLDIGLSTMMDALSQARGVLCNVIIPTGRVSA
Ga0182204_11050102	3300017409	Miscanthus Phyllosphere	MSGASRSPVQGESLLQWTDLQDPTSILFSLDDATESIERESLNEGISSMVDVLNQAKGILRDVIVPTG
Ga0182207_10767481	3300017410	Miscanthus Phyllosphere	MDPQDPMSILFSLDDATESIERESLDEGISAMMDVLNQARGVLRDVIVPTGRVSA
Ga0182207_11358582	3300017410	Miscanthus Phyllosphere	MDPQDLTSILFSLNDAIESTERESLNEGISAMMDVLNQARGVLRDIIVPTGWVSA
Ga0182207_11545461	3300017410	Miscanthus Phyllosphere	MAPQDPTLTLFSLDDATESIERESLDVGFSTMMDALSQARGILRDVIIPIGQVST
Ga0182207_11552462	3300017410	Miscanthus Phyllosphere	MDPQDPTSILFSLDDATGSTERESLDGGILAMMDVLNLARGVLRDIIVPTG
Ga0182208_10071423	3300017411	Miscanthus Phyllosphere	WDEPLLQWMDPQDPTSILFSLDDAIESIERERLNEGISAVLEALNQARGTQHDVVIPTGRVFT
Ga0182208_10203455	3300017411	Miscanthus Phyllosphere	SLLQWMDPQDPTSTLLSLDDATETIERGSLDEGISAMMGVLDQARVVLHDVIIPNGRVSA
Ga0182222_10398831	3300017413	Miscanthus Phyllosphere	MHPQDPTSILFSLDDATKSIEWESLNEGISAMMEVLNQARGILREVIIPTGQVFA
Ga0182202_11102721	3300017415	Miscanthus Phyllosphere	MDLQDPTSTLFSLNDAAESIERGSLDEGISTMMGVLDQARVILRDVIVPNGRVSA
Ga0182228_10695991	3300017420	Miscanthus Phyllosphere	SPTWGEPPLRWMAPQDPTSTLFSLDDASDSMELESLDIGFSAMMDALSQARGILRDVIIRTGRVCA
Ga0182219_10791482	3300017424	Miscanthus Phyllosphere	ARGEPLLHWMDPQDPTSTLLSLDDATESIEWGSLDKGISVMMGVLDQARVVLRDVIVPNGWVSA
Ga0182224_10309113	3300017425	Miscanthus Phyllosphere	DPQDPTSTLFLLNDVAKSIERGSLDEGISAMMGVLDQARVVLRDVIVPNGRVSV
Ga0182224_10782871	3300017425	Miscanthus Phyllosphere	LTLFSLDDATESIERGSLNEGISAMMDVLDQARVVLRDVIVNGRVSA
Ga0182224_11148282	3300017425	Miscanthus Phyllosphere	LDDATESIERGSLDEGISVMMDVLDQARVVLRDVIVPNGRVFA
Ga0182224_11296412	3300017425	Miscanthus Phyllosphere	MDPQDPTSILFSLNDATKSIERESLNKGILAMMEVLNQAMGILRDLIVPTGRVSA
Ga0182190_10950831	3300017427	Miscanthus Phyllosphere	RGESLLQWMDPQDPTSTLFSLDDATESIERGCLDEGISAMMDVLNQDRGILRDVIIPNGRVSA
Ga0182190_11000591	3300017427	Miscanthus Phyllosphere	MDPQDPTPILFSLDDATKRTKRESLDGGISAMMDVLNQARGILHDIIIPTGRVS
Ga0182206_11260702	3300017433	Miscanthus Phyllosphere	MDPQDPTSILFSLDDATESIERGSLNEGISAMMDVLDQARVVLRDVIVNGRVSA
Ga0182206_11590121	3300017433	Miscanthus Phyllosphere	MRGELSLQWMDPLDPTSTLVSLDDATESIERESLDEGISAMMDVLNQARGVLRDVIIPTGRVIA
Ga0182209_10583502	3300017436	Miscanthus Phyllosphere	VRGEPQLQWVDPQDPTSTLFSLDDATKSIERESLNEGISAMLEALNQARGALRDVIIPTVRVST
Ga0182191_11279941	3300017438	Miscanthus Phyllosphere	MDLQDPTSILFSLDDATESIERESLNDGISTMLEALNQARGVLCNVIIPIGRVFA
Ga0182221_10260822	3300017442	Miscanthus Phyllosphere	MDPQDPTSILFSLDDATESIEQESLDEGISAVMDVLNHAKGVLHDIIVPTSQVSA
Ga0182221_10714951	3300017442	Miscanthus Phyllosphere	HSPVQGRPLLQWMDPQDPTSILFSLDDATESIEWESLNEGISVMLEALIQARGVLRDVVIPTS
Ga0182221_10781152	3300017442	Miscanthus Phyllosphere	MDPQDLTSILFSLDDATESIKRESLNERILAMLEPLNQARGILCDVVIPTGWVFT
Ga0182221_10822581	3300017442	Miscanthus Phyllosphere	MDPHDPTSILFSLDDATERIEWESLNEGISAMLEVLNQRRSVLRDVIVPTGQVLT
Ga0182221_11147151	3300017442	Miscanthus Phyllosphere	GGSPMQGEPPLQWMAPQDPTSTLFSLDDATESIEQGSLDEGISVMMDVLNQARGILRDIIIPNGRVFA
Ga0182221_11168831	3300017442	Miscanthus Phyllosphere	MDPQDPTSTLFSLDDATESIERESLDGGISDMMDFLNQARGVLHDIIFPTS
Ga0182221_11372601	3300017442	Miscanthus Phyllosphere	LLQWMDPQDQLSILFSLDDATESIEWESLNEGILAMMDVLNQARGILRDVITPTGRVSA
Ga0182221_11522701	3300017442	Miscanthus Phyllosphere	MDPQDPTSILFSLDDCTESIERESLNKGISAMMEVLNQARGILRDVVVPTGWVST
Ga0182193_10610951	3300017443	Miscanthus Phyllosphere	MDPQDPTSILFSLDDATKSIERESLNEGISAMLEVLNQARGILRDVVVPTGWVST
Ga0182193_11054252	3300017443	Miscanthus Phyllosphere	MDLQDPTSILFSLDDATESLERESLNEGISAMLEVLNQARGVLRDVVVPTR
Ga0182193_11419791	3300017443	Miscanthus Phyllosphere	LFSLDDAAESIERGSLDQGISAMMGVLDQARVILRDVIVPNGWVSA
Ga0182229_10443403	3300017682	Miscanthus Phyllosphere	MWGESSLHGMDSQDPTSTLFSLDDATESIERGSLDEGISAMMGVLDEARVVLRDVIIPNGRVSA
Ga0182218_11124602	3300017683	Miscanthus Phyllosphere	MAPQDPTTTLFSLDDAAESIERGSLAEGISVMMGVLDQAWVVLHNVIVPNGRVST
Ga0182225_11238061	3300017684	Miscanthus Phyllosphere	PTSILFSLDDATESIEWESLNEGISAMMDVLNQAKDVVREVIVPTGRVSA
Ga0182227_10733162	3300017685	Miscanthus Phyllosphere	RGESSLRWMDPRDPVSTLFSLDDATESVEQGSLDEGISAMMGVLDQARVILRDVIVPNGRVSI
Ga0182223_10094192	3300017690	Miscanthus Phyllosphere	MNLQDPTSTLFSLDDATKSIERESLNEGISAMLEALNQARGALRDVVVPTGQVFT
Ga0182223_10363301	3300017690	Miscanthus Phyllosphere	PLQWMAPQDPTLTLFSLDDATESIERESLDVGFSTMMDALSQARGILRDVIVPTGQVSA
Ga0182232_10860562	3300021060	Phyllosphere	PLLQWMDPQDPTSILFSLDDATGSIERESLNEGISAMLEVLNQARGVLHDVVVPTGWVFT
Ga0207704_103027872	3300025938	Miscanthus Rhizosphere	MRGEPPLQWMAPQDPTSTLFSLDDATESIERESLDVGFSAMMDALSQAKGVLRDVIIPTGRVSA
Ga0207675_1009997652	3300026118	Switchgrass Rhizosphere	MDPQVPTSILFSLDDATESIERESLNEGISAVLEALNQARGALHNGVIPTGWVFT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065284

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences