Metagenome / Metatranscriptome Family F065321

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065321
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	61 residues
Representative Sequence	MWGRLRIILLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGIFIYLCVNFIYLVRRPRK
Number of Associated Samples	66
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.79 %
% of genes near scaffold ends (potentially truncated)	29.13 %
% of genes from short scaffolds (< 2000 bps)	88.19 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (79.528 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.559 % of family members)
Environment Ontology (ENVO)	Unclassified (51.969 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.504 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 74.60% β-sheet: 0.00% Coil/Unstructured: 25.40%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF06411	HdeA	7.09
PF12071	DUF3551	2.36
PF11272	DUF3072	2.36
PF03457	HA	1.57
PF00856	SET	1.57
PF00365	PFK	1.57
PF13356	Arm-DNA-bind_3	0.79
PF00196	GerE	0.79
PF00588	SpoU_methylase	0.79
PF07045	DUF1330	0.79
PF03288	Pox_D5	0.79
PF00574	CLP_protease	0.79
PF10691	DUF2497	0.79
PF00160	Pro_isomerase	0.79
PF01464	SLT	0.79
PF00156	Pribosyltran	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	1.57
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.57
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	1.57
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	0.79
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	0.79
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	0.79
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG3378	DNA primase, phage- or plasmid-associated	Mobilome: prophages, transposons [X]	0.79
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.53 %
All Organisms	root	All Organisms	20.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.53 %
cellular organisms	root	All Organisms → cellular organisms	20.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.53 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	19.69 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.53 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.60 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.79 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.79 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.53 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.45 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.53 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	5.51 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.79 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.79 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	0.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.53 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	5.51 %
filamentous cyanobacterium CCP2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → filamentous cyanobacterium CCP2	0.79 %
Methylorubrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum	0.79 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.79 %
Bacillariophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.53 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	5.51 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.79 %
Bacillariophycidae	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae	0.79 %
filamentous cyanobacterium CCP2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → filamentous cyanobacterium CCP2	0.79 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.53 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	3.94 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.57 %
Bacillariales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales	0.79 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.79 %
filamentous cyanobacterium CCP2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → filamentous cyanobacterium CCP2	0.79 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.53 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	3.94 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.57 %
Bacillariaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae	0.79 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.79 %
filamentous cyanobacterium CCP2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → filamentous cyanobacterium CCP2	0.79 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000655\|AF_2010_repII_A100DRAFT_1058049	Not Available	687	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10016763	Not Available	1767	Open in IMG/M
3300004633\|Ga0066395_10251706	Not Available	947	Open in IMG/M
3300004633\|Ga0066395_10488822	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300005332\|Ga0066388_100313236	All Organisms → cellular organisms → Bacteria	2215	Open in IMG/M
3300005332\|Ga0066388_100576588	Not Available	1751	Open in IMG/M
3300005332\|Ga0066388_100867865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1485	Open in IMG/M
3300005332\|Ga0066388_100928026	Not Available	1445	Open in IMG/M
3300005332\|Ga0066388_101984574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	1042	Open in IMG/M
3300005332\|Ga0066388_102010533	Not Available	1036	Open in IMG/M
3300005332\|Ga0066388_105386991	Not Available	649	Open in IMG/M
3300005332\|Ga0066388_106453863	Not Available	591	Open in IMG/M
3300005363\|Ga0008090_15646059	Not Available	786	Open in IMG/M
3300005764\|Ga0066903_100423831	Not Available	2205	Open in IMG/M
3300005764\|Ga0066903_100513730	Not Available	2036	Open in IMG/M
3300005764\|Ga0066903_100748260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1735	Open in IMG/M
3300005764\|Ga0066903_101968092	Not Available	1121	Open in IMG/M
3300005764\|Ga0066903_102336055	Not Available	1033	Open in IMG/M
3300005764\|Ga0066903_105901640	Not Available	642	Open in IMG/M
3300005764\|Ga0066903_107390583	Not Available	567	Open in IMG/M
3300009792\|Ga0126374_10156914	Not Available	1387	Open in IMG/M
3300010046\|Ga0126384_10835778	Not Available	827	Open in IMG/M
3300010048\|Ga0126373_10066714	All Organisms → cellular organisms → Bacteria → Proteobacteria	3240	Open in IMG/M
3300010048\|Ga0126373_10164818	Not Available	2120	Open in IMG/M
3300010048\|Ga0126373_10644020	Not Available	1115	Open in IMG/M
3300010048\|Ga0126373_12634692	Not Available	561	Open in IMG/M
3300010358\|Ga0126370_10631196	Not Available	930	Open in IMG/M
3300010360\|Ga0126372_10581047	Not Available	1071	Open in IMG/M
3300010361\|Ga0126378_10086409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3055	Open in IMG/M
3300010361\|Ga0126378_10224070	Not Available	1965	Open in IMG/M
3300010361\|Ga0126378_12220720	Not Available	626	Open in IMG/M
3300010361\|Ga0126378_12892148	Not Available	548	Open in IMG/M
3300010366\|Ga0126379_13390640	Not Available	534	Open in IMG/M
3300010376\|Ga0126381_104216397	Not Available	557	Open in IMG/M
3300010398\|Ga0126383_11943383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300010398\|Ga0126383_12131415	Not Available	647	Open in IMG/M
3300012677\|Ga0153928_1053741	Not Available	784	Open in IMG/M
3300012948\|Ga0126375_11757737	Not Available	540	Open in IMG/M
3300012971\|Ga0126369_10378483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1447	Open in IMG/M
3300012971\|Ga0126369_11912637	Not Available	682	Open in IMG/M
3300016270\|Ga0182036_10377450	Not Available	1099	Open in IMG/M
3300016319\|Ga0182033_11495654	Not Available	609	Open in IMG/M
3300016341\|Ga0182035_10811958	Not Available	821	Open in IMG/M
3300016387\|Ga0182040_10057393	Not Available	2457	Open in IMG/M
3300016387\|Ga0182040_10296603	Not Available	1235	Open in IMG/M
3300016387\|Ga0182040_11597153	Not Available	555	Open in IMG/M
3300016404\|Ga0182037_10474068	Not Available	1045	Open in IMG/M
3300016404\|Ga0182037_10964145	Not Available	742	Open in IMG/M
3300016404\|Ga0182037_11016479	Not Available	723	Open in IMG/M
3300016404\|Ga0182037_11916793	Not Available	531	Open in IMG/M
3300016422\|Ga0182039_10813713	Not Available	830	Open in IMG/M
3300016445\|Ga0182038_11251987	Not Available	662	Open in IMG/M
3300016445\|Ga0182038_11862465	Not Available	543	Open in IMG/M
3300021560\|Ga0126371_10030173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → filamentous cyanobacterium CCP2	5069	Open in IMG/M
3300021560\|Ga0126371_10036431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4641	Open in IMG/M
3300021560\|Ga0126371_10280133	All Organisms → cellular organisms → Bacteria	1789	Open in IMG/M
3300021560\|Ga0126371_10467783	Not Available	1408	Open in IMG/M
3300021560\|Ga0126371_10469716	Not Available	1405	Open in IMG/M
3300021560\|Ga0126371_10628726	Not Available	1222	Open in IMG/M
3300021560\|Ga0126371_12027396	Not Available	692	Open in IMG/M
3300021560\|Ga0126371_12062272	Not Available	687	Open in IMG/M
3300021560\|Ga0126371_12294234	Not Available	652	Open in IMG/M
3300021560\|Ga0126371_13156760	Not Available	557	Open in IMG/M
3300021560\|Ga0126371_13202667	Not Available	553	Open in IMG/M
3300026845\|Ga0207760_104751	Not Available	1178	Open in IMG/M
3300026942\|Ga0207783_1033108	Not Available	511	Open in IMG/M
3300027010\|Ga0207839_1005586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1564	Open in IMG/M
3300027680\|Ga0207826_1033531	Not Available	1425	Open in IMG/M
3300027874\|Ga0209465_10002037	All Organisms → cellular organisms → Bacteria	8877	Open in IMG/M
3300027874\|Ga0209465_10010315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4145	Open in IMG/M
3300031545\|Ga0318541_10312500	Not Available	876	Open in IMG/M
3300031564\|Ga0318573_10690107	Not Available	549	Open in IMG/M
3300031572\|Ga0318515_10594320	Not Available	588	Open in IMG/M
3300031573\|Ga0310915_10218345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	1336	Open in IMG/M
3300031573\|Ga0310915_10743241	Not Available	691	Open in IMG/M
3300031668\|Ga0318542_10221862	Not Available	957	Open in IMG/M
3300031668\|Ga0318542_10228313	Not Available	943	Open in IMG/M
3300031681\|Ga0318572_10282420	Not Available	979	Open in IMG/M
3300031724\|Ga0318500_10403343	Not Available	680	Open in IMG/M
3300031736\|Ga0318501_10180134	Not Available	1099	Open in IMG/M
3300031736\|Ga0318501_10680174	Not Available	567	Open in IMG/M
3300031744\|Ga0306918_10170820	Not Available	1621	Open in IMG/M
3300031744\|Ga0306918_10707904	Not Available	788	Open in IMG/M
3300031744\|Ga0306918_11293182	Not Available	561	Open in IMG/M
3300031748\|Ga0318492_10739559	Not Available	528	Open in IMG/M
3300031753\|Ga0307477_10257566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1208	Open in IMG/M
3300031753\|Ga0307477_11013286	Not Available	544	Open in IMG/M
3300031765\|Ga0318554_10179166	Not Available	1206	Open in IMG/M
3300031769\|Ga0318526_10337029	Not Available	617	Open in IMG/M
3300031771\|Ga0318546_10040712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	2837	Open in IMG/M
3300031771\|Ga0318546_10700661	Not Available	712	Open in IMG/M
3300031796\|Ga0318576_10188589	Not Available	969	Open in IMG/M
3300031879\|Ga0306919_10253117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	1325	Open in IMG/M
3300031879\|Ga0306919_10954421	Not Available	656	Open in IMG/M
3300031890\|Ga0306925_10402408	Not Available	1467	Open in IMG/M
3300031890\|Ga0306925_10408740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1454	Open in IMG/M
3300031890\|Ga0306925_10492028	All Organisms → cellular organisms → Bacteria → Proteobacteria	1307	Open in IMG/M
3300031890\|Ga0306925_11041465	Not Available	831	Open in IMG/M
3300031890\|Ga0306925_11330074	Not Available	712	Open in IMG/M
3300031893\|Ga0318536_10249552	Not Available	902	Open in IMG/M
3300031942\|Ga0310916_10249849	Not Available	1494	Open in IMG/M
3300031942\|Ga0310916_10460328	Not Available	1083	Open in IMG/M
3300031945\|Ga0310913_10006537	All Organisms → cellular organisms → Bacteria	6749	Open in IMG/M
3300031945\|Ga0310913_10732176	Not Available	699	Open in IMG/M
3300031946\|Ga0310910_10476850	Not Available	990	Open in IMG/M
3300031946\|Ga0310910_10722916	Not Available	786	Open in IMG/M
3300031946\|Ga0310910_10866052	Not Available	710	Open in IMG/M
3300031947\|Ga0310909_10747467	Not Available	810	Open in IMG/M
3300031947\|Ga0310909_10756041	Not Available	805	Open in IMG/M
3300031954\|Ga0306926_10447492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	1591	Open in IMG/M
3300031962\|Ga0307479_10093634	Not Available	2915	Open in IMG/M
3300032001\|Ga0306922_10733282	Not Available	1038	Open in IMG/M
3300032001\|Ga0306922_10949606	Not Available	890	Open in IMG/M
3300032035\|Ga0310911_10119253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	1463	Open in IMG/M
3300032035\|Ga0310911_10404274	Not Available	790	Open in IMG/M
3300032042\|Ga0318545_10148858	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae	832	Open in IMG/M
3300032044\|Ga0318558_10597271	Not Available	552	Open in IMG/M
3300032059\|Ga0318533_10171331	Not Available	1544	Open in IMG/M
3300032068\|Ga0318553_10110490	Not Available	1407	Open in IMG/M
3300032076\|Ga0306924_10446670	Not Available	1477	Open in IMG/M
3300032180\|Ga0307471_101002568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1002	Open in IMG/M
3300032261\|Ga0306920_100837801	Not Available	1348	Open in IMG/M
3300032261\|Ga0306920_100924578	Not Available	1274	Open in IMG/M
3300032261\|Ga0306920_101366731	Not Available	1016	Open in IMG/M
3300032261\|Ga0306920_103822593	Not Available	550	Open in IMG/M
3300033289\|Ga0310914_10137694	Not Available	2141	Open in IMG/M
3300033290\|Ga0318519_10828432	Not Available	570	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.21%
Host-Associated	Host-Associated	0.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.21%
Fungi	Host-Associated → Fungi	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.21%
Mycelium	Host-Associated → Fungi → Mycelium	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.10%
Loam	Environmental → Terrestrial → Soil → Loam	18.11%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	56.69%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.11%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.79%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	23.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	18.11%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.15%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.57%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.79%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012677	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaG	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026845	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 24 (SPAdes)	Environmental	Open in IMG/M
3300026942	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 63 (SPAdes)	Environmental	Open in IMG/M
3300027010	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 64 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A100DRAFT_10580492	3300000655	Forest Soil	MWGRLRIILLIGTAILWAFFAYVVIDASIIHPHREPILDYFVVXGIFIYLGVNFIYLVRRQRK*
AF_2010_repII_A001DRAFT_100167632	3300000793	Forest Soil	MWGRLRIILLIGTAILWAFFAYVVIDASIIHPHREPILDYFVVFGIFIYLGVNFIYLVRRQRK*
Ga0066395_102517061	3300004633	Tropical Forest Soil	MWGRLRFILLIGTAILLAFFAYVVIDSSIIHPHKEPILDYVIVYGILIYLCVNFIYLVRRPRK*
Ga0066395_104888221	3300004633	Tropical Forest Soil	MWGRLRIILLIASALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGILIYLCVNFIYLVRRPRK*
Ga0066388_1003132363	3300005332	Tropical Forest Soil	MWGRLRIILLIGTAILWAFFAYVVIDASIIHSHKEPILDYFLVYGIFIYLGVNFIYLVRRQRK*
Ga0066388_1005765882	3300005332	Tropical Forest Soil	MLLRIFLLIGNAVLLMFFAYVVIDSSIIHPHKEAILDYVIVYGIFIYLIVNFIYLVRRQRK*
Ga0066388_1008678653	3300005332	Tropical Forest Soil	MWGRLRIILLIGTAILWAFFGYVVIDSSIIHPHREAILDYVLVYGIFIYLGVNFIYLVRRRK*
Ga0066388_1009280263	3300005332	Tropical Forest Soil	MPLRVILLIGNALLLAFFAYVVIDSSIFHPHKEAILEYVLVYGIFIYLIINFIYLIRRQRK*
Ga0066388_1019845742	3300005332	Tropical Forest Soil	GNAVLLMFFAYVVIDSSILHPRKEAILDYVLVYGIFIYLCANFIYLIRRQRK*
Ga0066388_1020105332	3300005332	Tropical Forest Soil	MWGRLRIILLIGTVILWAFFGYVVIDSSIIHPHREPILDYVLVYGIFIYLGINFIYLVRRPRK*
Ga0066388_1053869912	3300005332	Tropical Forest Soil	MWGRLRIVLLIASALLLAFFAYVVIDSSIIHPHKEPILDYVLVYGIFIYLCVNFIYLVRRPRK*
Ga0066388_1064538631	3300005332	Tropical Forest Soil	MWGLLRIILLIGTAILWAFFAYVVVDASIIHPHREPILDYFVVYGIFIYLGVNFIYLVRRQRK*
Ga0008090_156460592	3300005363	Tropical Rainforest Soil	MWGRLRIILLIGTAILWAFFAYVVIDASIIHPHREPILDYFVVYGIFIYLGVNFIYLVRRQRK*
Ga0066903_1004238314	3300005764	Tropical Forest Soil	MPLRVILLIGNALLLAFFAYVVIDSSIFHPHKEAILDYVLVYGIFIYLIINFIYLIRRQRK*
Ga0066903_1005137302	3300005764	Tropical Forest Soil	MRIILLIGNALLLAFFAYVVIDSSIIHPHKEAILDYVIVYGIFIYLIVNFIYLIRPQRK*
Ga0066903_1007482605	3300005764	Tropical Forest Soil	MLLRIFLLIGNAVLLMFFAYVVIDSSIIHPRKEAILDYVLVYGIFIYLCANFIYLIRRQRK*
Ga0066903_1019680922	3300005764	Tropical Forest Soil	MSLRVILLIGNALLLAFFAYVVIDSSIIHPHKETILDYVIVYGIFIYLIVNFIYLIRRQRK*
Ga0066903_1023360553	3300005764	Tropical Forest Soil	MLLRILLLIGNAVLLMFFAYVVIDSSIIHPHKEAILDYVVVYGVFIYLIVNFIYLVRRQRK*
Ga0066903_1059016402	3300005764	Tropical Forest Soil	MWGRLRFILLIGTALLLAFFAYVVIDSSIIHPHKEAILDYVIVYGILIYLCVNFIYLVRRPRK*
Ga0066903_1073905832	3300005764	Tropical Forest Soil	MWGRLRIILLIGTAILWAFFAYVVIDSSIIHPHKEPILDYVLVYGIFIYLGVNFIYLVRRQRK*
Ga0126374_101569142	3300009792	Tropical Forest Soil	MWGLLRIILLIGTAILWAFFAYVVIDSSIIHPHREPILDYVLVYGIFIYLCVNFIYLVRRPRK*
Ga0126384_108357783	3300010046	Tropical Forest Soil	MLLRILLLIGNAVLLMFFAYVVIDSSIIHPHKEAILDYVIVYGIFIYLCANFVYLIRRQRK*
Ga0126373_100667143	3300010048	Tropical Forest Soil	MSLRVILLIGNALLLAFFAYVVIDSSIIHPHKEAILDYVIVYGIFIYLIVNFIYLIRRQRK*
Ga0126373_101648184	3300010048	Tropical Forest Soil	MRIILLIGNALLLAFFAYVVIDSSIIHPHKKAILDYVIVYGIFIYLIVNFIYLIRPQRK*
Ga0126373_106440202	3300010048	Tropical Forest Soil	MWGRLRIILLIGTAILWVFFAYVVIDASIIHPHKEPILDYFVVYGIFIYLGVNFIYLVRRQRK*
Ga0126373_126346922	3300010048	Tropical Forest Soil	GRLRIILLIGTAILWAFFAYVVIDSSIIHPHKEPILDYVVVYGIFIYLGVNFIYLLRRQRK*
Ga0126370_106311963	3300010358	Tropical Forest Soil	MWGLLRIILLIGTAILWAFFAYVVVDASIIHLHREPILDYFVVYGIFIYLGVNFIYLVRRQRK*
Ga0126372_105810472	3300010360	Tropical Forest Soil	MSLRVILLIGNALLLAFFAYVVIDSSTIHPHKEAILDYVIVYGIFIYLIVNFIYLIRRQRK*
Ga0126378_100864096	3300010361	Tropical Forest Soil	MSLRVILLIGNALLLAFFAYVVIDSSIIHPHKEAILDYVIVYGIFIYLIVNFIYLIRRHRK*
Ga0126378_102240703	3300010361	Tropical Forest Soil	MWGRLRIILLIGTAILWVFFAYVVIDASIIHPHKEPILDYFVVYGIFIYLGLNFIYLVRRQRK*
Ga0126378_122207201	3300010361	Tropical Forest Soil	MLLRIFLLIGNAALLMFFAYVVVDSSIIHPHKEAILDYVLVYGIFIYLCANFIYLIRRQRK*
Ga0126378_128921481	3300010361	Tropical Forest Soil	NAVLLMFFAYVVIDSSIIHPHKEAILDYVVVYGVFIYLIVNFIYLVRRQRK*
Ga0126379_133906401	3300010366	Tropical Forest Soil	FLLIGNAVLLMFFAYVVIDSSIIHPRKEAILDYVLVYGIFIYLCANFIYLIRRQRK*
Ga0126381_1042163971	3300010376	Tropical Forest Soil	MLLRIFLLIGNAVLLMFFAYVVIDSSILHPRKEAILDYVLVYGIFIYLCANFIYLIRRQRK*
Ga0126383_119433832	3300010398	Tropical Forest Soil	MLLRIFLVIGNAVLLMFFAYVVIDSSIVHPHKEAILDYVIVYGIFIYLCANFVYLIRRQRK*
Ga0126383_121314151	3300010398	Tropical Forest Soil	MLLRIFLLIGNAILLVFFAYVVIDSSIIHPHKEAILDYVIVYGIFIYLIVNFIYLVRRQRK*
Ga0153928_10537412	3300012677	Attine Ant Fungus Gardens	MWGRLRIILLIASALLWAFFAYVVIDSSVIHPHKEPILDYVVVYGIFIYLGVNFIYLVRRPRK*
Ga0126375_117577371	3300012948	Tropical Forest Soil	SCAMLLRIFLLIGNAVLLMFFAYVVIDSSIIHPRKEAILDYVLVYGIFIYLCANFIYLIRRQRK*
Ga0126369_103784833	3300012971	Tropical Forest Soil	LIGNAVLLMFFAYVVIDSSIIHPRKEAILDYVLVYGIFIYLCANFIYLIRRQRK*
Ga0126369_119126371	3300012971	Tropical Forest Soil	MWGRLRIILLIASALLLAFFAYVVIDSSIIHPHKEAILDYVIVYGILIYLCVNFIYLVRRPRK*
Ga0182036_103774503	3300016270	Soil	MWGRLRIILLIGTAILWVFFAYVVIDASIIHPHKEPILDYFVVYGIFIYLGGNFIYLVRRQRK
Ga0182033_114956543	3300016319	Soil	MWGRLRFILLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGILIYLCVNFIYLVRR
Ga0182035_108119582	3300016341	Soil	MWGRLRIILLIGTAILWAFFAYIVIDSSIIHPHKEPILDYVIVYGIFIYLGVNFIYLVRRQRK
Ga0182040_100573931	3300016387	Soil	MWGRLRIILLIGTAILWAFFAYVVIDSSIIHPHKEPILDYVIVYGIFIYLCVNLIYLVRRQRK
Ga0182040_102966031	3300016387	Soil	MLLRIFLLIGNAVLLMFFAYVVIDSSIIHPHKEAIVDYVLVYGIFIYLCANFIYLIRRQK
Ga0182040_115971531	3300016387	Soil	NAVLLMFFAYVVIDSSIIHPRKEAILDYVLVYGIFIYLCANFIYLVRRQRK
Ga0182037_104740681	3300016404	Soil	MWGRLRIILLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGILIYLCVNFI
Ga0182037_109641451	3300016404	Soil	MWGRLRFILLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGILIYLCVNFI
Ga0182037_110164793	3300016404	Soil	GRLRIILLIGTAILWVFFAYVVIDASIIHPHKELILDYFVVYGIFIYLGVNFIYLVRRKR
Ga0182037_119167931	3300016404	Soil	MWGRLRIILLIGTAILWAFFAYIVIDSSIIHPHKEPILDYVIVYGIFIYLGVNFIYLVRRPRK
Ga0182039_108137132	3300016422	Soil	WGRLRIILLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVLVYGIFIYLCVNFIYLVRRPRK
Ga0182038_112519871	3300016445	Soil	MWGRLRIILLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGILIYLCVN
Ga0182038_118624652	3300016445	Soil	MLLRIFLLIGNAVLLMFFAYVVIDSSIIHPRKEAILDYVLVYGIFIYLCANFIYLVRGQR
Ga0126371_100301732	3300021560	Tropical Forest Soil	MRIILLIGNALLLAFFAYVVIDSSIIHPHKEAILDYVIVYGIFIYLIVNFIYLIRPQRK
Ga0126371_100364317	3300021560	Tropical Forest Soil	MSLRVILLIGNALLLAFFAYVVIDSSIIHPHKEAILDYVIVYGIFIYLIVNFIYLIRRQR
Ga0126371_102801332	3300021560	Tropical Forest Soil	MLLRIFLLIGNAVLLMFFAYVVIDSSIIHPRKEAILDYVLVYGIFIYLCANFIYLIRRQR
Ga0126371_104677832	3300021560	Tropical Forest Soil	MWGRLRIILLIGTAILWAFFGYVVIDSSIIHPHREAILDYVLVYGIFIYLGVNFIYLVRRRK
Ga0126371_104697161	3300021560	Tropical Forest Soil	MWGRLRIILLVASALLWAFFAYVVIDSSIIHPHKEPILDYVVVYGIFIYLGVNFIYLLRRPRK
Ga0126371_106287264	3300021560	Tropical Forest Soil	MPLRVILLIGNALLLAFFAYVVIDSSIFHPHKEAILDYVLVYGIFIYLIINFIYLIRRQR
Ga0126371_120273962	3300021560	Tropical Forest Soil	MWGRLRIILLIGTAILWAFFAYVVIDASIIHPHKEPILDYFVVYGIFIYLGVNFIYLVRRQRK
Ga0126371_120622722	3300021560	Tropical Forest Soil	MWGLLRIILLIGTAILWAFFAYVVVDASIIHPHREPILDYFVVYGIFIYLGVNFIYLVRRQRK
Ga0126371_122942342	3300021560	Tropical Forest Soil	MLLRIFLLIGNAILLMFFAYVVIDSSIIHPHKEAILDYVIVYGIFVYLIVNFIYLIRRQR
Ga0126371_131567601	3300021560	Tropical Forest Soil	MLLRIFLLIGNAVLLMFFAYVVIDSSILHPRKEAILDYVLVYGIFIYLCANFIYLIRRQR
Ga0126371_132026672	3300021560	Tropical Forest Soil	MWGRLRIILLIASALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGIFIYLCVNFIYLVRRPRK
Ga0207760_1047511	3300026845	Tropical Forest Soil	MRIILLIGNALLLAFFAYVVIDSSIIHPRKEAILDYVIVYGIFIYLVVNFIYL
Ga0207783_10331081	3300026942	Tropical Forest Soil	MWGLLRIILLIGNALLLAFFAYVVIDSSVIHPHKEPILDYVIVYGIFIYLVVNFIYLVRPQRK
Ga0207839_10055861	3300027010	Tropical Forest Soil	MRIILLIGNALLLAFFAYVVIDSSIIHPRKEAILDYVIVYGIFIYLVVNFIYLVRRQRK
Ga0207826_10335314	3300027680	Tropical Forest Soil	MWGRLRIILLIGTAILWVFFAYVVIDSSIIHPHKEPILDYVLVYGIFIYLGFNFIYLVRRQRK
Ga0209465_100020371	3300027874	Tropical Forest Soil	MWGRLRIILLIGTAILWVFFAYVVIDASIIHPHKEPILDYFVVYGIFIYLGVNFIYLVRRERK
Ga0209465_100103155	3300027874	Tropical Forest Soil	MWGRLRIILLIASALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGILIYLCVNFIYLVRRPRK
Ga0318541_103125002	3300031545	Soil	MWGRLRIILLIASALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGIFIYLSVNFIYLVRRPRK
Ga0318573_106901072	3300031564	Soil	MWGRLRFILLIGTALLLAFFAYVVIDSSIIHAHKEAILDYVIVYGILIYLCVNFIYLVRRPRK
Ga0318515_105943201	3300031572	Soil	MWGRLRIILLIASALLLAFFAYVVIDSSIIHLHKEPILDYVIVYGIFIYLCVNFIYLVRRPRK
Ga0310915_102183451	3300031573	Soil	MWGRLRFILLIGTALLLAFFTYVVIDSSIIHPHKEPILDYVIVYGILIYLCVNFIYLVRRPR
Ga0310915_107432412	3300031573	Soil	MWGRLRFILLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGILIYLCVNFIYLVRRPR
Ga0318542_102218621	3300031668	Soil	MLLRIFLLIGNAVLLMFFAYVVIDSSIIHPHKEAILDYVLVYGIFIYLCANFIYLIRRQK
Ga0318542_102283132	3300031668	Soil	MWGRLRFILLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGILIYLCVNFIYLVRRPRK
Ga0318572_102824201	3300031681	Soil	MWGRLRIILLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGIFIYLCVNFIYLVRRPRK
Ga0318500_104033431	3300031724	Soil	MWGRLRIILLIGTAILWVFFAYVVIDASIIHPHKEPILDYFVVYGIFIYLGVNFIYLVRRQRK
Ga0318501_101801341	3300031736	Soil	MWGRLRIILLIASALLLAFFAYVVIDSSIIHPHKEPILDYVLVYGIFIYLCVNFIYLVRRPRK
Ga0318501_106801741	3300031736	Soil	SWAMWGRLRIILLIASALLWAFFAYVVIDSSIIHPHKEPILDYVVVYGIFIYLGVNFIYLLRRPRK
Ga0306918_101708202	3300031744	Soil	MSLRIILLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVLVYGIFIYLCVNFIYLVRRPR
Ga0306918_107079042	3300031744	Soil	MWGRLRIILLIGTAILWAFFAYVVIDSSIIHPHKEPVLDYLIVYGIFIYLGVNFIYLVRRQRK
Ga0306918_112931821	3300031744	Soil	MWGRLRFILLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVLVYGIFIYLCVNFVYLVRRPRK
Ga0318492_107395592	3300031748	Soil	MLLRIFLLIGNAVLLMFFAYVVIDSSIIHPHKEAILDYVLVYGIFIYLCANFIYLIRRQR
Ga0307477_102575662	3300031753	Hardwood Forest Soil	MWGRLRIILMVASALLWAFFAYVVIDSSIIHPHKEPILDYVIVYGIFIYLSVNFIYLVRRPRK
Ga0307477_110132862	3300031753	Hardwood Forest Soil	SWAMWGLRIILLIASALLWAFFAYVVIDSSVIHPHKEPILDYVVVYGIFIYLGVNFIYLVRRPRK
Ga0318554_101791663	3300031765	Soil	MWGRLRIILLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGILIYLCVNFIYLVRRPRK
Ga0318526_103370292	3300031769	Soil	MWGRLRFILLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGIFIYLCVNFIYLVRRPRK
Ga0318546_100407123	3300031771	Soil	MWGRLRFILLIGTALLLAFFTYVVIDSSIIHPHKEPILDYVIVYGILIYLCVNFIYLVRRPRK
Ga0318546_107006611	3300031771	Soil	ILLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGILIYLCVNFIYLVRRPRK
Ga0318576_101885892	3300031796	Soil	MLLRIFLLIGNAVLLMFFAYVVIDSSIIHPHKEAILDYVIVYGIFIYLCANFIYLIRRQK
Ga0306919_102531173	3300031879	Soil	MWGRLRFILLIGTALLLAFFTYVVIDSSIIHPHKEPILDYVIVYGILIYLCVNFIYLV
Ga0306919_109544211	3300031879	Soil	MWGRLRIILLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGILIYLCVNFIYLVR
Ga0306925_104024082	3300031890	Soil	LRLRIFLLIGNAVLLMFFAYVVIDSSIIHPRKEAILDYVLVYGIFIYLCANFIYLIRRQR
Ga0306925_104087401	3300031890	Soil	MWGRLRIILLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVLVYGIFIYLCVNFIYLVRRPRK
Ga0306925_104920283	3300031890	Soil	MRLRIILLIGNVVLLAFFAYVVIDSSIIHPHKEPILDYVLVYGIFIYLCANFIYLIRRQR
Ga0306925_110414652	3300031890	Soil	LLRIFLLIGNAVLLMFFAYVVIDSSIIHPRKEAILDYVLVYGIFIYLCANFIYLIRRQRK
Ga0306925_113300741	3300031890	Soil	MWGRLRIILLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGILIYLCVNFIYLVRRPR
Ga0318536_102495521	3300031893	Soil	MWGRLRIVLLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGILIYLCVNFIYLVRRPRK
Ga0310916_102498491	3300031942	Soil	LLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGILIYLCVNFIYLVRRPRK
Ga0310916_104603281	3300031942	Soil	MWGRLRFILLIGTALLLAFFTYVVIDSSIIHPHKEPILDYVIVYGILIYLCVNFI
Ga0310913_1000653712	3300031945	Soil	MWGRLRFILLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGILIYLCVNFIY
Ga0310913_107321762	3300031945	Soil	MSLRVILLIGNALLLAFFAYVVIDSSIIHSHKEAILDYVIVYGILIYLIVNFIYLVRRQR
Ga0310910_104768503	3300031946	Soil	MLLRIFLLIGNAVLLMFFAYVVIDSSIIHPHKEAILDYVLVYGIFIYLCANFIYLIR
Ga0310910_107229163	3300031946	Soil	MWGRLRFILLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVLVYGIFIYLCVNFIYLVRRPRK
Ga0310910_108660522	3300031946	Soil	MWGRLRIILLIGTAILWVFFAYVVIDASIIHPHKEPILGYFVVYGIFIYLGVNFIYLVRRQRK
Ga0310909_107474672	3300031947	Soil	MWGRLRIILLIGTALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGILIYLCVNFIY
Ga0310909_107560412	3300031947	Soil	MLLRIFLLIGNAVLLMFFAYVVIDSSIIHPRKEAILDYVLVYGIFIYLCANFIYLIRRQK
Ga0306926_104474921	3300031954	Soil	LIGNAVLLMFFAYVVIDSSIIHPHKEAILDYVLVYGIFIYLCANFIYLIRRQKK
Ga0307479_100936345	3300031962	Hardwood Forest Soil	MWGRLRIILLIASALLWAFFAYVVIDSSVIHPHKEPILDYVVVYGIFIYLGVNFIYLVRRPRK
Ga0306922_107332823	3300032001	Soil	MRLRIFLLIGNAVLLMFFAYVVIDSSIIHPRKEAILDYVLVYGIFIYLCANFIYLIRRQR
Ga0306922_109496061	3300032001	Soil	MWGRLRIILLIGTAILWAFFAYVVIDSSIIHPHKEPVLDYLIVYGIFIYLGVN
Ga0310911_101192531	3300032035	Soil	MWGRLRFILLIGTALLLAFFTYVVIDSSIIHPHKEPILDYVIVYGILIYLCVNFIYLVRR
Ga0310911_104042742	3300032035	Soil	MWGRLRIILLIASALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGIFIYLCVNFIYLVRR
Ga0318545_101488582	3300032042	Soil	MWGRLRIILLIASALLLAFFAYVVIDSSIIHPHKEPILDYVIVYGIFIYLCVNFI
Ga0318558_105972711	3300032044	Soil	MLLRIFLLIGNAVLLMFFAYVVIDSSIIHPHKEAILDYVLVYGIFIYLCANFIYLIRRK
Ga0318533_101713314	3300032059	Soil	MLLRIFLLIGNAVLLMFFAYVVIDSSIIHPRKEAILDYVLVYGIFIYLCANFIYLIRRQT
Ga0318553_101104901	3300032068	Soil	MWGRLRIILLIGTAILWAFFAYVVIDSSIIHPHKEPILDYVIVYGIFIYLCVNFIYLVRRPRK
Ga0306924_104466701	3300032076	Soil	MWGRLRIILLIGTAILWAFFAYIVIDSSIIHPHKEPILDYVIVYGIFIYLGVNFIYLVRRPRKRIAP
Ga0307471_1010025682	3300032180	Hardwood Forest Soil	MWGRLRIILMVASALLWAFFAYVVIDSSVIHPHKEPILDYVVVYGIFIYLGVNFIYLVRRPRK
Ga0306920_1008378012	3300032261	Soil	MWGRLRFILLIGTALLLAFFAYVVIDSSIIHPHKEAILDYVIVYGILIYLCVNFIYLVRRPRK
Ga0306920_1009245783	3300032261	Soil	MLLRIFLLIGNAVLLMFFAYVVIDSSIIHPRKEAILDYVLVYGIFIYLCANFIYLVRRQR
Ga0306920_1013667312	3300032261	Soil	MLLRIFLLIGNAVLLMFFAYVVIDSSIIHPHKEAILDYVIVYGIFIYLCANFIYLIRRQT
Ga0306920_1038225931	3300032261	Soil	MWGRLRIILLIGTAILWAFFAYVVIDSSIIHPHKEPVLDYVIVYGIFIYLGINFIYLVRRQRK
Ga0310914_101376944	3300033289	Soil	GTAILWAFFAYVVIDSSIIHPHKEPILDYVIVYGIFIYLCVNLIYLVRRQRK
Ga0318519_108284321	3300033290	Soil	VMWGRLRIILLAASALLWAFFAYVVIDSSIIHPHKEPILDYVVVYGIFIYLGVNFIYLLRRPRK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065321

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences