NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F065372

Metagenome / Metatranscriptome Family F065372

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F065372
Family Type Metagenome / Metatranscriptome
Number of Sequences 127
Average Sequence Length 97 residues
Representative Sequence VHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRPGKEKASDSGAAAGEKELGYQSPARELKGVYHDDDSDSDNGDRRKKLYVMYGGSWELVS
Number of Associated Samples 84
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Eukaryota
% of genes with valid RBS motifs 87.60 %
% of genes near scaffold ends (potentially truncated) 82.68 %
% of genes from short scaffolds (< 2000 bps) 95.28 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Eukaryota (54.331 % of family members)
NCBI Taxonomy ID 2759
Taxonomy All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere
(74.803 % of family members)
Environment Ontology (ENVO) Unclassified
(89.764 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(59.843 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 11.02%    β-sheet: 7.87%    Coil/Unstructured: 81.10%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.22
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 127 Family Scaffolds
PF03732Retrotrans_gag 3.94


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms54.33 %
UnclassifiedrootN/A45.67 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005355|Ga0070671_101520754All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays592Open in IMG/M
3300005365|Ga0070688_101756922Not Available508Open in IMG/M
3300005467|Ga0070706_101575492All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays599Open in IMG/M
3300005548|Ga0070665_102622407All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays505Open in IMG/M
3300005843|Ga0068860_102569547All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays528Open in IMG/M
3300009092|Ga0105250_10244499All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays766Open in IMG/M
3300009553|Ga0105249_11289728All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays802Open in IMG/M
3300009975|Ga0105129_102632All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays904Open in IMG/M
3300009975|Ga0105129_115810Not Available557Open in IMG/M
3300009976|Ga0105128_118342Not Available536Open in IMG/M
3300009976|Ga0105128_121534Not Available507Open in IMG/M
3300009977|Ga0105141_121589All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays567Open in IMG/M
3300009980|Ga0105135_124515All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays547Open in IMG/M
3300009981|Ga0105133_116421Not Available620Open in IMG/M
3300009981|Ga0105133_127796Not Available528Open in IMG/M
3300009989|Ga0105131_121536All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays641Open in IMG/M
3300009990|Ga0105132_110863All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays773Open in IMG/M
3300009990|Ga0105132_132855Not Available562Open in IMG/M
3300009992|Ga0105120_1023700Not Available692Open in IMG/M
3300009994|Ga0105126_1026718All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii660Open in IMG/M
3300009994|Ga0105126_1055440Not Available507Open in IMG/M
3300009995|Ga0105139_1021948All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays963Open in IMG/M
3300009995|Ga0105139_1070013All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays650Open in IMG/M
3300009995|Ga0105139_1080393All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays614Open in IMG/M
3300009995|Ga0105139_1081802All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays609Open in IMG/M
3300010371|Ga0134125_11114785All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays863Open in IMG/M
3300010371|Ga0134125_11231703All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays817Open in IMG/M
3300010400|Ga0134122_11807102Not Available643Open in IMG/M
3300010401|Ga0134121_11128502All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays779Open in IMG/M
3300014968|Ga0157379_11937265Not Available581Open in IMG/M
3300015270|Ga0182183_1050703All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays616Open in IMG/M
3300015273|Ga0182102_1021895Not Available619Open in IMG/M
3300015278|Ga0182099_1053559Not Available553Open in IMG/M
3300015284|Ga0182101_1025759All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays783Open in IMG/M
3300015290|Ga0182105_1053715All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays644Open in IMG/M
3300015290|Ga0182105_1103936Not Available509Open in IMG/M
3300015293|Ga0182103_1040400All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays682Open in IMG/M
3300015297|Ga0182104_1116673Not Available508Open in IMG/M
3300015311|Ga0182182_1033673All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays784Open in IMG/M
3300015311|Ga0182182_1056421All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays663Open in IMG/M
3300015311|Ga0182182_1071765All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays610Open in IMG/M
3300015312|Ga0182168_1061519All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays682Open in IMG/M
3300015312|Ga0182168_1077344All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays628Open in IMG/M
3300015312|Ga0182168_1082322All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays614Open in IMG/M
3300015312|Ga0182168_1095455Not Available580Open in IMG/M
3300015313|Ga0182164_1072942Not Available641Open in IMG/M
3300015315|Ga0182120_1066954All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays667Open in IMG/M
3300015319|Ga0182130_1094713Not Available579Open in IMG/M
3300015319|Ga0182130_1099248All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays569Open in IMG/M
3300015325|Ga0182148_1052921Not Available730Open in IMG/M
3300015325|Ga0182148_1144872All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays504Open in IMG/M
3300015326|Ga0182166_1143240Not Available505Open in IMG/M
3300015330|Ga0182152_1067705All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays694Open in IMG/M
3300015330|Ga0182152_1102135Not Available595Open in IMG/M
3300015331|Ga0182131_1110548All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays579Open in IMG/M
3300015331|Ga0182131_1148893Not Available513Open in IMG/M
3300015331|Ga0182131_1158017Not Available500Open in IMG/M
3300015332|Ga0182117_1062800All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii757Open in IMG/M
3300015332|Ga0182117_1151193Not Available529Open in IMG/M
3300015336|Ga0182150_1048726All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays803Open in IMG/M
3300015336|Ga0182150_1167197Not Available501Open in IMG/M
3300015337|Ga0182151_1088272All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii648Open in IMG/M
3300015338|Ga0182137_1137008Not Available565Open in IMG/M
3300015339|Ga0182149_1129882Not Available569Open in IMG/M
3300015339|Ga0182149_1167579Not Available511Open in IMG/M
3300015340|Ga0182133_1190910Not Available503Open in IMG/M
3300015348|Ga0182115_1290991Not Available516Open in IMG/M
3300015349|Ga0182185_1226569Not Available567Open in IMG/M
3300015352|Ga0182169_1310444All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii507Open in IMG/M
3300015353|Ga0182179_1117094All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays810Open in IMG/M
3300015353|Ga0182179_1200306All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays635Open in IMG/M
3300015353|Ga0182179_1276976Not Available543Open in IMG/M
3300015354|Ga0182167_1347344All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii519Open in IMG/M
3300017414|Ga0182195_1178924All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays550Open in IMG/M
3300017422|Ga0182201_1042861All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays759Open in IMG/M
3300017435|Ga0182194_1058150All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays722Open in IMG/M
3300017439|Ga0182200_1060004All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays714Open in IMG/M
3300017439|Ga0182200_1089759All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii623Open in IMG/M
3300017439|Ga0182200_1160452Not Available507Open in IMG/M
3300017445|Ga0182198_1109418All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays640Open in IMG/M
3300017445|Ga0182198_1201903All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii503Open in IMG/M
3300017691|Ga0182212_1104193All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays638Open in IMG/M
3300017692|Ga0182210_1150461Not Available518Open in IMG/M
3300017694|Ga0182211_1137921Not Available578Open in IMG/M
3300028474|Ga0268331_1022275All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays543Open in IMG/M
3300032465|Ga0214493_1136741Not Available572Open in IMG/M
3300032465|Ga0214493_1145592Not Available550Open in IMG/M
3300032465|Ga0214493_1151927Not Available536Open in IMG/M
3300032465|Ga0214493_1162755Not Available513Open in IMG/M
3300032467|Ga0214488_1093742All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays655Open in IMG/M
3300032468|Ga0214482_1111499Not Available511Open in IMG/M
3300032490|Ga0214495_1075825All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii783Open in IMG/M
3300032490|Ga0214495_1148198Not Available520Open in IMG/M
3300032548|Ga0214483_1041384All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays776Open in IMG/M
3300032550|Ga0321340_1056742Not Available538Open in IMG/M
3300032589|Ga0214500_1120825All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays747Open in IMG/M
3300032589|Ga0214500_1144360All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays678Open in IMG/M
3300032591|Ga0214484_1114909All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii545Open in IMG/M
3300032593|Ga0321338_1121636All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii925Open in IMG/M
3300032593|Ga0321338_1323780Not Available552Open in IMG/M
3300032593|Ga0321338_1340130Not Available537Open in IMG/M
3300032698|Ga0214485_1043218All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays864Open in IMG/M
3300032699|Ga0214494_1074410All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays647Open in IMG/M
3300032699|Ga0214494_1105117Not Available525Open in IMG/M
3300032791|Ga0314748_1111385Not Available572Open in IMG/M
3300032812|Ga0314745_1075850All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays715Open in IMG/M
3300032812|Ga0314745_1103325Not Available591Open in IMG/M
3300032812|Ga0314745_1114039Not Available555Open in IMG/M
3300032824|Ga0314735_1081367Not Available606Open in IMG/M
3300032824|Ga0314735_1103469Not Available525Open in IMG/M
3300032875|Ga0314737_1045890All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii759Open in IMG/M
3300032890|Ga0314747_1046653All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays640Open in IMG/M
3300032914|Ga0314750_1169121Not Available507Open in IMG/M
3300032917|Ga0314721_125461All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays622Open in IMG/M
3300032918|Ga0314726_103817All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays1543Open in IMG/M
3300032970|Ga0314716_127470All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii665Open in IMG/M
3300032970|Ga0314716_132263All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays604Open in IMG/M
3300033525|Ga0314758_1085529All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta881Open in IMG/M
3300033530|Ga0314760_1117293All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays655Open in IMG/M
3300033534|Ga0314757_1124924Not Available620Open in IMG/M
3300033538|Ga0314755_1177201All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii542Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere74.80%
Switchgrass AssociatedHost-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated14.17%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.57%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.57%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.79%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.79%
PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere0.79%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009975Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_187 metaGHost-AssociatedOpen in IMG/M
3300009976Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_186 metaGHost-AssociatedOpen in IMG/M
3300009977Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_91 metaGHost-AssociatedOpen in IMG/M
3300009980Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_219 metaGHost-AssociatedOpen in IMG/M
3300009981Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_208 metaGHost-AssociatedOpen in IMG/M
3300009989Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_197 metaGHost-AssociatedOpen in IMG/M
3300009990Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_206 metaGHost-AssociatedOpen in IMG/M
3300009992Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_108 metaGHost-AssociatedOpen in IMG/M
3300009994Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_171 metaGHost-AssociatedOpen in IMG/M
3300009995Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_227 metaGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015270Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015273Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015278Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015284Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015290Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015293Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015297Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015311Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015312Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015313Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015315Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015316Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015319Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015325Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015326Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015330Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015331Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015332Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015336Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015337Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015338Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015339Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015340Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015348Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015349Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015352Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015353Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015354Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017414Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017422Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017435Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017439Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017445Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017447Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017691Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017692Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017694Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300028474Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300032465Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032467Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_31MAY2016_LR2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032468Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_31MAY2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032490Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032548Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_31MAY2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032550Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_12SEP2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032589Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_12SEP2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032591Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_31MAY2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032593Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_12SEP2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032698Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_31MAY2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032699Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032791Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_07AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032812Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_17JUL2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032824Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_26JUN2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032875Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_26JUN2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032890Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_07AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032914Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_07AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032917Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_15MAY2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032918Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_05JUN2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032970Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_15MAY2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033525Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_28AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033530Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_28AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033534Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_28AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033538Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_28AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0070671_10152075413300005355Switchgrass RhizosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRAGKEKASDSGAVAGEEELGYQSPARELKGVYHDDDSDSDNGDRRKKL
Ga0070688_10175692213300005365Switchgrass RhizosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRAGKEKASDGGAAAGEKELGYQSPARELKGVYHDDDSDSDNGDRRKKLYVMYGGSWELVSRRDVKTLRREVLSVKPG
Ga0070706_10157549213300005467Corn, Switchgrass And Miscanthus RhizosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDDSPPPRQRAGKEKASDSGAAAGEKELGYQSPARELKGVYHNDDSDSDNGDRRKKLY
Ga0070665_10262240713300005548Switchgrass RhizosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRPGKEKASDSGAAAREKELGYQSPARELKGVYH
Ga0068860_10256954723300005843Switchgrass RhizosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRAGKEKASDSGAAAGEKELGYQSPARELKGVYHDDDSDSDNGDRR
Ga0105250_1024449913300009092Switchgrass RhizosphereVHPTARHSAADCREIQKLANRVSGRREQSSKDGSTPPRQRPGKEKASDSGAAAGEKELGYQSPARELKGVYHDDNSDSDSGNCRKKLYVMYGGSWELVS*
Ga0105249_1128972813300009553Switchgrass RhizosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQQSGKEKASDSGAAAGEKELGYQSPARELKGVYHDDDSDSDNGDHRKKLYVM*
Ga0105129_10263223300009975Switchgrass AssociatedVHPTARHSAADCREIQKLTKRVSGRREQSSKDVAPPPRQRPDKEKASDSGAAAGEKELGYQSPTRELKGVYHDDDSDSDNGDRRKKLYVMYGGSW
Ga0105129_11581013300009975Switchgrass AssociatedVHPTARHSAADCREIQKLTKRVSGRREQASKDGSPPPRQRSGKEKASDSEAAAGEKELGHQSPTQELKGIYSHDNSDSDNEEHRKNLYVMYGGSWELVSRRDVKTLRREVLSAKPGCRVE
Ga0105128_11834223300009976Switchgrass AssociatedVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQLSGKEKADSETAAGEKELGYQSPAKELKGVYRHDKSDSDNKEHRKKLYVMYGRSWELISWRDVKTLRREVISVKPEV
Ga0105128_12153413300009976Switchgrass AssociatedVHPTARHSAADCREIQKLAKRVNGRREQSSKDGSPPPRQRPGKEKASDSGAAAGEKELGYQSPARELKGVYSHDNSGSDNEERRKKLYVMNGGSWELVSRRDVKT
Ga0105141_12158913300009977Switchgrass AssociatedVHPTAHHSAADCREIQKLAKWVSGRREQSFKDGSPPPRQRPGKEKASDSGAAAGEKELGYQSPARELKGVYH
Ga0105135_12451523300009980Switchgrass AssociatedVHPTTRHSAADCREIQKLAKRISGRRELSSKDGSPPPRQRLGKEKASDGGAAAGEKELGYQSPARELKGVYHDDDS
Ga0105133_11642123300009981Switchgrass AssociatedVIQKLAKRVNGRREQASKDGSPPPRQQFGKEKASNSEAATGEKELGYQSPARELKGVYSHDNSDPDNEERRKKLYVMYGESWELVSRWDVKTLRREVLLVNRGSRRRRRTTCG*
Ga0105133_12779613300009981Switchgrass AssociatedVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRAGKEKASDSGAAAGEKELGYQSPARELKGVYHNDDSDSDNGDRRKKLYVMYGGSWELVSRRDVKTLRREVLS
Ga0105131_12153613300009989Switchgrass AssociatedVHPTARHSAADCREIQKLAKRVSGRREQSSKDDSPPPRQRAGKEKASDSRAAAGEKELGYQSPARELKGVYHNDDSDSDNGDRRKKLYVM
Ga0105132_11086323300009990Switchgrass AssociatedVHPTARHSAADCHEIQKLAKRVNGLREQSSKNGSPPPQQRPGKEKASDSGAAAGEKELEYQSPARELKGVYHDNNSDSDNDDHCKKLYVMYGGSWELVSRRDVKTLRREVL*
Ga0105132_13285513300009990Switchgrass AssociatedVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRPGKEKASDSGAAAGEKELGYQSPAQELKGVYHDDNSDSGNDDRRKKRYVMYGESWELVSRRDV
Ga0105120_102370013300009992Switchgrass AssociatedVHPTARHSVADCREIQKLAKRVSGRREQASKDVSPPPRQRSSKEKASDSETAAGEKELGYQSPARELKGVYHDDNSDSDNDDRRKKLYVMYGGS*
Ga0105126_102671813300009994Switchgrass AssociatedPQGGSGGSCPVHPTARYSAADCRDIQKLAKRVSGRRKQSSKDGSPPPRQRPGKEKASDSATAAGEKELGYQSPARELKGMYHDDNSDSDNDDRRKKL*
Ga0105126_105544013300009994Switchgrass AssociatedVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSCPPRQRSGKEKASDSGTAAGEKELGYQSPARELKGVYRHDNSDSGNEERRKKLYVMYDGSWELVPWR
Ga0105139_102194823300009995Switchgrass AssociatedVHPTARHSADDCREIQKLAKRVSERREQSSKDGSPPPRQRPGKEKASDSGAAAGEKELGYQSPARELKGVYHDDNSDSDNDDRRKKLYVMYGGSW*
Ga0105139_107001313300009995Switchgrass AssociatedVHPTARHSAADCREIQKLAKRVSGRREQPSKDDSPPPRQRAGKEKAPDSGAAAGEKELGYQSPARELKGVYHNDDSDSDNGDRRKKLYVMYGGSWELVSRRDVKTLRRE
Ga0105139_108039313300009995Switchgrass AssociatedVHPTARHSAADYREIQKLAKQVNGRREQSSKDGSPPPRQRPGKEKASYSGAAAGEKELGYQSPARELKGVYHDDNFDSDNDDRHKKLYIMYGGSWELVSWRDVKTLRREVLSVKPGVPKA
Ga0105139_108180213300009995Switchgrass AssociatedVHPTARHSAADCCEIQKLAKRVSGRREQSSKDGSPPPRQRSGKEKASDSGTATGEKELGYQSPARELKGIYSHDNSGSDNEEHRKKLYVMYGGSWELVSRRDMKTLRREVLSVKP
Ga0134125_1111478523300010371Terrestrial SoilVHPTARHSDADCREIQKLAKRVSGRREQSSKDGSPPPRQRPGKEKASDSGAAAEEKELGYQSPARELKGVYHDDNSDFDND
Ga0134125_1123170313300010371Terrestrial SoilVHPTARHSAADCREIQKLGKRVSGRREQASKDGSPPPRQRSGKKKSSDSETAAGEKELGYQSPTRELKGIYSRDKSDSDNDECRRKLYVMYGGS
Ga0134124_1252249123300010397Terrestrial SoilVAGGQNAHGKRPRPLGGNRGSCPVHPSARHRAADCREIQKLTKRVSGRREQASKDGSPPPRQRSGKEKASDSETATGEKELGYQSPAREPKGVYSHDNSDSDNEERRKKLYVMYGG
Ga0134122_1180710223300010400Terrestrial SoilVKRVSGRREQASKDGSPPPHQRSGKEKASDGEAAAGKELGYQSPARELKGVYSHDNSDSDNEERRKKLYVMYGGSWELVPRRDVKILHREVLSVKPGVPKAAP
Ga0134121_1112850223300010401Terrestrial SoilVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSSPPRQRAGKEKASDSGAATGEKELGYQSPARELKGVYNEDYSDSDNGHHCQKLYAMYG
Ga0157379_1193726513300014968Switchgrass RhizosphereMPTARHSTTDCHEIQKLVKRVSGRHAQASKDGSPPPRQRSGKEKASDSEAAAEEKELGYQSPARELKGFYSHDNSDSDNEERRKKLYVMYNGSCELVSWRDVKT
Ga0182183_105070313300015270Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRAGKEKASDSGAAAGEKELGYQSPARELKGVYHDDDSDSDNGDRRKKLYVMYGGSWELVSRRDVKTLR
Ga0182102_102189523300015273Switchgrass PhyllosphereVHPTARHNAADYREIQKLAKRVHGRREQASKDGSPPPHQRSGKEKASDSETAVGEKELGYQSPARELKGIYSNDSSDSYNEEHRKKLYVMYGGSWELVS
Ga0182099_105355913300015278Switchgrass PhyllosphereVHPTARHSAADCREIQKLANRVSGWREQSSKDGSPPPRQRSGKEKASDSETAVGEKELGYQSTARELKGVYSCDNSYSDNEERRKKLYVMYGGSWELVSRRDVKTLR*
Ga0182101_102575913300015284Switchgrass PhyllosphereVHPTARHSAADCCEIQKLAKQVSGRREQSSKDGSPPPRQRPGKEKASDSGAAAGEKELGYQSPARELKGVYHDDNSDSDSGDRRKKLYVMYGGSWELVSR
Ga0182105_105371513300015290Switchgrass PhyllosphereVHPTARHSAADCHEIQKLAKRVSGRREQSSKDGSPPPRQRPGKEKASDSGAAAGEKELGYQSPARELKGVYHDDNSDSDNDDRRKKLYVMYGGSWELVSRRDVKTLRREVLS
Ga0182105_110393623300015290Switchgrass PhyllosphereVHPTTRHSTADCREIQKLAKRVSGRREQSSRDGSPPPRQRPGKEKASDSGTAAGEKELGYQSPFRELKGVYHDDNSDSDNDDR
Ga0182103_104040013300015293Switchgrass PhyllosphereVHPTARHSTSDCREIQKLAKRVSGRHEQASKDGSPPPHQRSGKEKASDSESTTGEKALGYQSPARELNGVYSRDNSDSDNEERHKKLYVMYGRS*
Ga0182104_111667323300015297Switchgrass PhyllosphereHPTARHSAAYCREIQKLAKRVSGRREQASKDGSPPPRQRSGKEKASDSEAVAGEKELGYQSPARELKGIYSHDNSDSDNEERRKKLYVMYGGR*
Ga0182182_103367313300015311Switchgrass PhyllosphereVHPTAHHSAADCREIQKLMKRVSGWHEQSSKDGSPPPRQRPGKEKASDSRAAAGEKELEYQSPARELKGVY
Ga0182182_105642113300015311Switchgrass PhyllosphereVHPTARHNAADCREIQKLAKRVSGRREQSSKDGSPPPRQRPGKEKASDSGAAAGEKELGYQSPARELKGVYHDDDSDSDNGNRRKKLYVMYG
Ga0182182_107176513300015311Switchgrass PhyllosphereVHPTARHSAAECREIQKLAKRVSGRREQASKDGSPPPHQRSGKEKASDSGTATGEKELGYQSPAQELKGIYSHDNSDSDNEERRKKLYIMYGESWELVSWRDV
Ga0182168_106151913300015312Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRHEQSSKDGSPPPRQWPGKEKASDSGAADKEKELGYQSPARELKGVYHDDDSDSDNGDRRKKLYVMYG
Ga0182168_107734413300015312Switchgrass PhyllosphereVHPTAHHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRSGKEKASDSKTTVGEKELAYQSPAWELKGVYSHDNSDS
Ga0182168_108232213300015312Switchgrass PhyllosphereVHSTARHSAADCREIQKLAKWVSGRREQSSKDGSPPPRQRAGKEKASDSGAAAGEKELGYQSPARELKGVYHDDNSDSDNDDRRKKLYVM
Ga0182168_109545513300015312Switchgrass PhyllosphereVHPTARHSAADYREIQKLAKRVSGRREQSSKDGSPPPRQRPGKEKASDSETAAGEKELGYQSPTKELKGVYRHDNSDSDNEERRKKLYVMYGRSWELVSRWDVK
Ga0182164_107294213300015313Switchgrass PhyllosphereVHPTTRHIAADYREIQKLTKQVSGRREQSSKDGSPPPRQRPGKEKASDSGAAAGEKELGYQSPARELKGVYHDDDSDSDNGDRRKKLYVMYGGSWELVSRRDVKTLRREVLSVKPG
Ga0182120_106695413300015315Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRCEQSYKDGSPPPRQRPGKEKASDSGAAAGEKELGYQSPARELKGVYHDDNSDSDSGDHCKKLYVM
Ga0182121_107617713300015316Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRREQPSKDGSPPHRQRSGKEKASDNETAAGEKELGYQSPAR
Ga0182130_109471313300015319Switchgrass PhyllosphereVHPPARHSATDCREIQKLAKRVSGQHEQASKDGSPPPRQWSGKEKASDSETTAGEKELGYQSPAKELKGVYRHNNSDSNNEERRKKLYVMYGGSWELVSRRDV
Ga0182130_109924813300015319Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRSGKEKASDSETAAGEKELGYQSPAKELKGVYRHDNSDSDNEDRRKKMYIMYGGSW
Ga0182148_105292123300015325Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDSSPPPQQQPGKEKASDSGTAAGEKELGYQSPTRELKGVYHDDNSDSDNDDRHKKLYVMYGGSWELVFRRDVKTLR*
Ga0182148_114487213300015325Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRPGKEKASDSGAAAGEKELGYQSPARE
Ga0182166_114324013300015326Switchgrass PhyllosphereVHPTARHNAANCREIQKLAKRVSGRREQASKDGSPPPHQQPGKEKASDSEAATVEKELGYQSPARELKGVYSQVDTDSGDDGDHRKKLYVMYGGRWELVSQRDMKTLRREVLSV
Ga0182152_106770513300015330Switchgrass PhyllosphereVHPTARHCAADCREIQKLTKRVSGRREQSSKDGSPPPRQRLGKEKASNSGAAAGEKELGYQSPARELMGIYRHDNSDSDNEESRKKLFVMYDRSW
Ga0182152_110213513300015330Switchgrass PhyllosphereMPVHPTARHSAADCREIQKLAKQVSGQREQSSKDGLPPPRQRPGKEKASDSGATAGEKELGYQSPAQELKGVYHDDDSDSDNGDRRKKL
Ga0182131_111054823300015331Switchgrass PhyllosphereMPSAADYREIQKLAKRVSGRHEQSSKDGSPPPRQWPGKEKASDSGTAAGEKELGNQSPARELKGVYHGDTSDSDSVT*
Ga0182131_114889313300015331Switchgrass PhyllosphereMKRVSGRREQSSKDGSPPLCQRSSKEKASDSETAVGEKELGYQSSFRELKGVYRHDNSDSDNEERRKKLYVMYGGSWELVSRRDVKTLRREVLSAKPGVPKAAP
Ga0182131_115801713300015331Switchgrass PhyllosphereMPSARHSAADCREIQKLAKRVSGRREQSSKDGSPLPSQRSGKEKASDSGTAVGKKELGYQSPARELKGVYHDDNSDSDNDDRRKTLYVMYGGSWELVSR
Ga0182117_106280023300015332Switchgrass PhyllospherePRPQGSSGGSYPVHPTARHSAADYREIQKLAKRVSGWREQSSKDGSPPPRQRPGKEKASDSETAAGEKELGYQSPAKELKGVYRHDNSDSDNEEHRKKLYVM*
Ga0182117_115119323300015332Switchgrass PhyllospherePVHPTARHSAADCREIQKLTKWVSGRREQSSKDGSPPPRQRPGKEKASDSGAAAEEKELGYQSPARELKGVYHDDDSDSDNGDRRKKL*
Ga0182150_104872613300015336Switchgrass PhyllosphereVHPTARHRAADCREIQKLAKRVSGQREQSSKDGSPPPRQWSGKDKTSDSETATGEKELGYQSPARELKGVYRHDNSDSDNEERRKKLYVMYSGSWELVSRRDVKT
Ga0182150_116719713300015336Switchgrass PhyllosphereMNRALAVYKSGALVNVNSPQGGGGGSCPVHPTARHSAADCREIQKLAERVSGRREQASKDGLPPPRQWSGKEKASDSETAVGEKELGYQSPARELNGVYSHDNFDSDNEDHRKKLYVMYG
Ga0182151_108827223300015337Switchgrass PhyllosphereCREIQKLAKRVSGRREQASKDGSPPPCQRPGKEKASDSEAAAVEKGLGYQSPARELKGVYSHGDTDSGEDERRKKLYVMYGGSS*
Ga0182137_113700813300015338Switchgrass PhyllosphereVHPTARELSAALWRVSGRREQSSKDGSPPPRQRAGKEKASDSGAAAGEKELGYQSPARELKGIYSHENSDSDNEERRKKLYVMYGRSWELVSRWDVKTLRREVL
Ga0182149_112988213300015339Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRRQQSSKDGSPPPRLRPSKEKASDSGAAAREKELGYQSPAQELKGAYHDDNSDSDNDDHRKKLYVLYGGSWELVSWR
Ga0182149_116757913300015339Switchgrass PhyllosphereVHPTARHNAADCREIQKLAKRVSGRREQSSKDDSPPPHQRAGKEKASDSGAAAREKELGYQSPARELKGVYHNNDSDSDNGDRRKKLYVMYGGSWELVSRRDVKTLR
Ga0182133_119091013300015340Switchgrass PhyllosphereVHPTARHSAADCHEIQKLAKWVSGRREQASKDGSPPPRQWSGKEKASDSGTAAGEKELGYQSPARELKGVYSRDNSDSDNEERRKKLYVMYGRSWELVSRRDVKTLRQEV
Ga0182115_129099113300015348Switchgrass PhyllosphereVYPIARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRPGKEKASDSGAAAGEKELGYQSPARELKGVYHDDNSDSDNDDCRKKLYVMYGGSWELVSRRDV
Ga0182185_122656913300015349Switchgrass PhyllosphereVHPTARHNAADYREIQKLAKRVSGRREQSSKDGSPPPRQRPGKEKASDSGAAPGEKELGYQSPARELKGVYHDDNSDSDNDDRRKKLYVMYDGSWELVSRRDVKTLRRE
Ga0182169_119146513300015352Switchgrass PhyllosphereMPSASHRSQTAADCREIQKLVKRVSGRREQSSKDGLPPPRQRSGKEKASNSEAAAGEKELGYQSPARELKGVYSHDNS
Ga0182169_131044423300015352Switchgrass PhyllosphereGNGGSCLVHPTARHSAANCREIQKLAKRVSGWREQASDSEAAAMEKGLGYQSPARELKGVYHDDNSDSDNDDRRKKLYVMSPGGT*
Ga0182179_111709413300015353Switchgrass PhyllosphereVHGKHLLPQGGNGGSCPVHPTARHNFADCREIQKLAKWVSGRREQASKDGSPPPCQHSGKEKASDSETAVSEKELGYQSPARELKGIYNHDNSGSNNEERPKKLYVMYGGSWELVSRRDVKTLRREVLSAKPG
Ga0182179_120030613300015353Switchgrass PhyllosphereMHPTARHSAADCREIQKLAKRVSGWREQSSKDGSPPPRQWPGKEKASDSGAAAGEKELGYQSPARELKGVYHDDNSDSDNNDRHKKLY
Ga0182179_127697613300015353Switchgrass PhyllosphereVHPTARHSAADCHEIQKLAKRVSGRREQSSKDGSPPPRQRPGKEKASDSGAAAREKELGYQSPARELKGVYHDDDSDSDNGDRRKKLYVMYGGSW
Ga0182167_134734423300015354Switchgrass PhyllosphereRHSAADCREIQKLAKRVSGRREQPSKDGSPPPRQRAGKEKASDSGTAAGEKELGYQSPARELKGVFHDDDSDSDNGDRRKKLYVMYGGS*
Ga0182195_117892413300017414Switchgrass PhyllosphereVHPTACHSAADCCEIQKLAKRVSGRWEQSSKDGSPPPRQRPGKEKASDGGAAAGEKELGYQSPARELKGIYHD
Ga0182201_104286113300017422Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKWVSGRREQASKDGSPPPRQRSGKEKASDSETAVGEKELGYQSPARELKGVYRHDNSDSDNEERRKKLYVMYGGSWELVSRRDVK
Ga0182194_105815023300017435Switchgrass PhyllosphereVHPTARHSAADCREIQKLVKRVSRRREQASKDGSPPPRQWPGKEKASDSETVAGEKELGYQSPARELKGVYSDDNSDSDNEERRKKLYVMYGGSWELVSRRDVK
Ga0182200_106000423300017439Switchgrass PhyllosphereMPMGQNTCAKHPCQQGGDSSSCPVHPTTRHSDAECRKIQKLAKRVSERCKQATKDGSSPPRQRPGKEKASDGETAAGEKELGYQYPNRELKNLFSQNDSDSDDKE
Ga0182200_108975913300017439Switchgrass PhyllospherePQGGNEGSCPVHPTARHNAADCRKIQKLTKRVSGRREQASKDGSPPPHQRSGKEKASDSETATGEKELGYQSPARELKGVYSHDNSDSDNEDRRKKLYVMYG
Ga0182200_116045213300017439Switchgrass PhyllosphereVLPTARHSAADCREIQKLVKRVSGRSEQSSKDGSPPPRQRSGMEKASDSGTAAGEKELGYQSPAQELKGIYSHDNSGSDNEECRKKLYVMNGGSWELVSRQ
Ga0182198_110941813300017445Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRPGKEKASDSGAAAGEKELGYQSPARELKGVYHDDDSDSDNGDRRKKLYVMYGGSWELVS
Ga0182198_120190313300017445Switchgrass PhyllosphereVSGRREQSSKDGSPPPRQRPGKEKASDSGAAAGEKELGYQSPARELKGVYHDDDSNSDNGDCHKKLYVMYGGSWEFVSQRDMKTLRREVLSVKPGVRKASPH
Ga0182215_113686923300017447Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRREQASKDGPPPPRQRSGKEKASDSEAAAGEKELGFQSPARELKGIY
Ga0182212_110419323300017691Switchgrass PhyllosphereMKRVSGRREQASKDGSPPPRQRSGKEKASDSEAAAGEKELGYQSPARELKGVYSHDNSDSGNEERRKKLYVMYGGSWELVSRRDVKTLRREVLSAKPGVPQFPSGHL
Ga0182210_115046123300017692Switchgrass PhyllosphereLHPTAHHSAADCHEIQKLAKRISGRREQSSKDGSPPPCQRSSKEKASDSGTATREKELGYQSPARELKGVYHDNNSDSDNDDRRKKLYVMYGRSWELVSRRNV
Ga0182211_113792113300017694Switchgrass PhyllosphereLHPTARHSAADCREIQKLAKRVSGWREQSSKDGSPPPRQRAGKEKASDSGAAAGEKELGYQSPARELKGVYHDDDSDSDNGDRRKKLYVMYGGSWELVSRRDVKTLR
Ga0268331_102227523300028474PhyllosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDDSPPPRQRAGKEKASDSGAAAGEKELGYQSPARELKGVYHNDDSDSDNGDRRKKLYV
Ga0214493_113674113300032465Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRAGKEKASDSGAAAGEKELGYQSPARELKGVYHDDDSDSDNGDRRKKLYVMYGGSWELVSRRDVKT
Ga0214493_114559213300032465Switchgrass PhyllosphereVHPIARHSAADCREIQKLAKQVSGRCEEASKYGSPPPRQRPGKEKASDSETAAGEKELGYQSPAKELKGVYRHDNSDSDNEERRKKMYVMYGGSWELVSWRDVKTLRREVLSV
Ga0214493_115192713300032465Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRPGKEKASDSGAVAGEKELGYQSPARELKGVYHDDDSDSDNGDRRKKLYVMYDGSWELVSR
Ga0214493_116275513300032465Switchgrass PhyllosphereVHPTAHHSAADCREIQKLAKWVSGRREQSSKDGSPPPRQRPGKEKASDSGAAAGEKELGYQSPARELKDVYHDNNSDSDNDDCRKKLYVMYGGSWELVSRRDVNTLRR
Ga0214488_109374213300032467Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDDSPPPRQRAGKEKASDSRAAAGEKELGYQSPARELKGVYHNDDSDSDNGDRRKKLY
Ga0214482_111149923300032468Switchgrass PhyllosphereVHPTARHSVADCREIQKLAKWVNGRREQSSKDGSPPPRQWPGKEKASDNGAAAGEKELGYQSPARELKGVYHDDNSDSGDRRKKLYVMYGRSWELVSRRD
Ga0214495_107582523300032490Switchgrass PhyllosphereGSCPVHPTARHSAADCREIQKLAKRVGGRRDQAFKDGSPTPRQRPGKEKASDSEATAVEKGLGYQSPARELKGVYSHGDTDSGEDERCKKMYVMYG
Ga0214495_114819813300032490Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRCEQSSKDNSPPPRQRPGKEKASDSGAAAGEKELGYQSPARELKGVYGHDNSDSDGEERRKKLYV
Ga0214483_104138413300032548Switchgrass PhyllosphereVHPTARHSAPDCREIQKLVKRVSGRCEQSSKDGSPPPRQRSGKEKASDSEASAGEKELEYQSPARELKGVYSHDNSDSDNEERR
Ga0321340_105674213300032550Switchgrass PhyllosphereSGGSCPVHLTARHSAADCREIQKLAKRVSGWREQSSKDGSTPPRQRPGKEKASDSGTAAGEKELGYQSPARELKGVYNRDNSDSDNEERRKKLYVMYGGS
Ga0214500_112082523300032589Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRAGKEKASDSGAAAGEKELGYQSPARELKGVYHDDDSDSDNGDRRKKLYVM
Ga0214500_114436023300032589Switchgrass PhyllosphereVHPIARHSAADCREIQKLAKRVSGRCEQSSKDGSPPPRQRPGKEKASDSGATAEEKELGYQSPARELKGVYHDDNFDSDNDDRCKKLYVMYDGSWELVSRRDVKT
Ga0214484_111490923300032591Switchgrass PhyllosphereVHPTARHSVADCREIQKLAKWVNGRREQSSKDGSPPPRQWPGKEKASDNGAAAGEKELGYQSPARELKGVYHDDNSDSDNDDRRKKLYVMYGGSWELV
Ga0321338_112163613300032593Switchgrass PhyllosphereHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRAGKEKASDSGAAAGEKELGYQSPARELKGVYRHDNSDSDNEERRKKLYVMYGGSWELVSRRDVKTLH
Ga0321338_132378013300032593Switchgrass PhyllosphereVHPTARHSAADCREIQKLAERVSGRREQSSKDGSAPPRQRPGKEKASDSGVAAGEKELGYQSPARELNGVYSRDNSDSDNEERRKKLYAMYGGS
Ga0321338_134013013300032593Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRAGKEKASDSGAAAGEKELGYQSPARELKGVYHDDDSDSDNGDRRKKLYVMYGGSWE
Ga0214485_104321813300032698Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRPGKAKASDSGATAEEKELGYQSPARELKGVYHDDDSDSDNGDRRKKLYVMYGGSWEL
Ga0214485_109542913300032698Switchgrass PhyllosphereVHPTARHSALTAEIQKLAKPVSGRREQSSKDGSPPPRQWSGKEKASDSETAAGEKELGYQSPAKELKGVYP
Ga0214494_107441023300032699Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRAGKEKASDSGAAAGEKELGYQSPARELKGVYH
Ga0214494_110511713300032699Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDDSPPPRQRAGKEKASDSRAAAGEKELGYQSPARELKGVYHNDDSDSDNGDRRKKLYVMYGG
Ga0314748_111138513300032791Switchgrass PhyllosphereVHPTARHSAADCREIQKHAKRVSGRREQFSKDSSPPPRQRPGKEKASDSGAAAGEELGYQSPARELKGVYHDDNSDSDNGDRRKKLYVMYGGSWELVTRRNVKTLRREVLSVKPGVP
Ga0314745_107585013300032812Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRAGKEKASDSGAAAGEKELGYQSPARELKGVYHDDDSDSDNGDRRKKLYV
Ga0314745_108195923300032812Switchgrass PhyllosphereMRMAHARHSAADCREIQKLAKRVSGRREQASKDGSPPSLQRPGKEKASDSETAAGEKELGYQSPARELKGVYS
Ga0314745_110332523300032812Switchgrass PhyllosphereVHPTARHSAPDCREIQKLVRRVSGRREQSSNDGSPPPRQRSGKEKASDSEASAGEKELEYQSPARELKGVYSHNNSDSDNVERRKKWYVKYGGSWELVSRRDVKTLRREV
Ga0314745_111403923300032812Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGWREQSYKDGSPPPRQRPGKEKASDSGTAAGEKELGYQSPARELKGVY
Ga0314735_108136723300032824Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRSGKEKASDSETAAGEKELGYQSPAKEMKGVYRHDNSDSDNEERRKKLYIMYGGS
Ga0314735_110346923300032824Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRREQSFKDGSPPPRQRAGKEKASDSGAAAGEKELGYQSPARELKGVYHDDDSDSD
Ga0314737_104589023300032875Switchgrass PhyllosphereVHPTARQSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRSGKEKAFDSEAAAEEELGYQSLARELKGVYSHDNSDSDNEERRKKLYVMYDGSWELVPGGT
Ga0314747_104665323300032890Switchgrass PhyllosphereVHGKRPRPQGGNGGSCPVYPTARHSAADCREIQKLVKRVSGRREQSSKDGSPPPRQRSDKEKASDSEIAAGEKELGYQSPARELKGVYSHDNSDSDNEEHRKK
Ga0314750_116912113300032914Switchgrass PhyllosphereVHPTARHSAPDCREIQKLVKRVSGRREQSSKDGSPPPRQRSGKEKASDSGTAAGEKELGYQSPARELKGVYHDDNSDSDSDDRRKKLYVMYGGSWELVSRRD
Ga0314721_12546113300032917Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRVSGRRDQSSKDSSPPPRQRPGKEKASDSGAADGEKELGYQSPARELKGVYHDD
Ga0314726_10381733300032918Switchgrass PhyllosphereVHPTARHSAPDCREIQKLVRRVSGRREQSSKDGSPPPRQRAGKEKASDSGAAAGEKELGYQSPARELKGVYHNDDSDSDNGDRRKKLYVMYGRSWELVSRRDVKTLRREVL
Ga0314716_12747023300032970Switchgrass PhyllosphereVHPTACHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQWPGKEKASDSGAAAGEKELGYQSPARELKGVYHDDDSDSDNGDRRKKLYVMYGGSWELVSRRDVKTLRREVL
Ga0314716_13226323300032970Switchgrass PhyllosphereVHPTARHSAADCRKIQKLAKRVGGRREQASKDGSPPPRQRSGKEKASDSETAVGEKELGYQSPARDLKGVYSH
Ga0314758_108552913300033525Switchgrass PhyllosphereVHPTARHSAADCREIQKLAKRISGRREQSSKDGSPPPRQRSGKEKASDSETAVGEKELGYQSPARDLKGVYSHDNSDSDNEERRKKLYVMYGGSWELDSRRDVKTLRREVLSVKPGVPKT
Ga0314760_111729323300033530Switchgrass PhyllosphereVHPTARHSAAGCREIQKLAKRVSGRREQSSKDGSPPPRQRPGKEKASDSGAAAGEELGYQSPARELKGVYRHDNSDSDNEERRKKLYVMYGGSWDLVSRRDVK
Ga0314757_112492413300033534Switchgrass PhyllosphereMHPTARHSAADCREIQKLAKRVSGRREQSSKDGSPPPRQRAGKEKASDSGAAAGEKEQGYQSPARELKGIYHDDDSDSDNGDRRKKLYVMYGGSWEL
Ga0314755_117720123300033538Switchgrass PhyllosphereSAADYREIQKLAKQVGGRREQAFKDGSPTPRQRPGKEKASDGEATAVEKGLGYQFPARELKGVYSHGDTDSGEDERRKKLYVMYGGSWELVSRRDVKTLH

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.