Metagenome Family F065456

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065456
Family Type	Metagenome
Number of Sequences	127
Average Sequence Length	80 residues
Representative Sequence	MMEHRFGAEQRRALAMLATADRNGAPQALLSAHGFDASLIAGLVNRGLATLTAEKVLAGGKLIAVAKARITEAGREALAAEGR
Number of Associated Samples	72
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.17 %
% of genes near scaffold ends (potentially truncated)	18.90 %
% of genes from short scaffolds (< 2000 bps)	77.17 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.992 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (65.354 % of family members)
Environment Ontology (ENVO)	Unclassified (57.480 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (65.354 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.94% β-sheet: 19.82% Coil/Unstructured: 43.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF00072	Response_reg	4.72
PF00027	cNMP_binding	4.72
PF02586	SRAP	2.36
PF05940	NnrS	2.36
PF00313	CSD	2.36
PF06823	DUF1236	1.57
PF02796	HTH_7	1.57
PF13561	adh_short_C2	0.79
PF13432	TPR_16	0.79
PF12071	DUF3551	0.79
PF02737	3HCDH_N	0.79
PF00080	Sod_Cu	0.79
PF00665	rve	0.79
PF14384	BrnA_antitoxin	0.79
PF02826	2-Hacid_dh_C	0.79
PF13431	TPR_17	0.79
PF13581	HATPase_c_2	0.79
PF00589	Phage_integrase	0.79
PF07536	HWE_HK	0.79
PF00436	SSB	0.79
PF05013	FGase	0.79
PF01695	IstB_IS21	0.79
PF00239	Resolvase	0.79
PF13673	Acetyltransf_10	0.79
PF00753	Lactamase_B	0.79
PF13924	Lipocalin_5	0.79
PF00515	TPR_1	0.79
PF04237	YjbR	0.79
PF06114	Peptidase_M78	0.79
PF13670	PepSY_2	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG3213	Nitric oxide response protein NnrS	Signal transduction mechanisms [T]	2.36
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	2.36
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.79
COG3741	N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	0.79
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.79
COG3931	Predicted N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	0.79
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.79
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.79
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.79
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.79
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.79
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.79
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.79
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.79
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.79
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.79
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.79
COG2032	Cu/Zn superoxide dismutase	Inorganic ion transport and metabolism [P]	0.79
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.79
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	0.79
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.79
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.79
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.79
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.99 %
All Organisms	root	All Organisms	37.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.99 %
cellular organisms	root	All Organisms → cellular organisms	37.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.99 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.77 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.99 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.47 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	1.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.02 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.94 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	1.57 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.15 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.36 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.57 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	1.57 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.79 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.79 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.79 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.15 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1.57 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	1.57 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.79 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.79 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.79 %
Aquisediminimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Aquisediminimonas	0.79 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.15 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1.57 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	1.57 %
Aquisediminimonas profunda	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Aquisediminimonas → Aquisediminimonas profunda	0.79 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.79 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.79 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.79 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002907\|JGI25613J43889_10131953	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300002917\|JGI25616J43925_10119186	Not Available	1075	Open in IMG/M
3300004633\|Ga0066395_10069944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1613	Open in IMG/M
3300005332\|Ga0066388_100076108	All Organisms → cellular organisms → Bacteria	3696	Open in IMG/M
3300005332\|Ga0066388_100095994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3410	Open in IMG/M
3300005555\|Ga0066692_10449418	Not Available	821	Open in IMG/M
3300005764\|Ga0066903_100010375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8887	Open in IMG/M
3300005764\|Ga0066903_104641471	Not Available	732	Open in IMG/M
3300007255\|Ga0099791_10058680	Not Available	1730	Open in IMG/M
3300007255\|Ga0099791_10085598	All Organisms → cellular organisms → Bacteria → Proteobacteria	1441	Open in IMG/M
3300007255\|Ga0099791_10233278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	871	Open in IMG/M
3300007258\|Ga0099793_10121805	Not Available	1220	Open in IMG/M
3300007258\|Ga0099793_10175840	Not Available	1021	Open in IMG/M
3300007258\|Ga0099793_10284372	Not Available	802	Open in IMG/M
3300007258\|Ga0099793_10334015	Not Available	739	Open in IMG/M
3300007258\|Ga0099793_10426642	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300007788\|Ga0099795_10205449	Not Available	832	Open in IMG/M
3300007788\|Ga0099795_10595187	Not Available	526	Open in IMG/M
3300009038\|Ga0099829_10023020	All Organisms → cellular organisms → Bacteria → Proteobacteria	4312	Open in IMG/M
3300009038\|Ga0099829_10131812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1979	Open in IMG/M
3300009038\|Ga0099829_10863852	Not Available	751	Open in IMG/M
3300009089\|Ga0099828_10017566	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	5506	Open in IMG/M
3300009143\|Ga0099792_10023750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2766	Open in IMG/M
3300009143\|Ga0099792_10059184	All Organisms → cellular organisms → Bacteria	1895	Open in IMG/M
3300009143\|Ga0099792_10458934	Not Available	790	Open in IMG/M
3300009143\|Ga0099792_10521527	Not Available	747	Open in IMG/M
3300009143\|Ga0099792_10852023	Not Available	600	Open in IMG/M
3300010043\|Ga0126380_10946095	Not Available	720	Open in IMG/M
3300010046\|Ga0126384_10057382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2713	Open in IMG/M
3300010047\|Ga0126382_10245490	Not Available	1308	Open in IMG/M
3300010048\|Ga0126373_12841253	Not Available	540	Open in IMG/M
3300010358\|Ga0126370_11813639	Not Available	591	Open in IMG/M
3300010359\|Ga0126376_10789135	Not Available	926	Open in IMG/M
3300010366\|Ga0126379_12137286	Not Available	661	Open in IMG/M
3300010398\|Ga0126383_10616181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Aquisediminimonas → Aquisediminimonas profunda	1158	Open in IMG/M
3300011269\|Ga0137392_10225845	Not Available	1537	Open in IMG/M
3300011270\|Ga0137391_10760613	Not Available	801	Open in IMG/M
3300011271\|Ga0137393_10229518	Not Available	1572	Open in IMG/M
3300012096\|Ga0137389_10177199	Not Available	1763	Open in IMG/M
3300012096\|Ga0137389_10260803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1459	Open in IMG/M
3300012096\|Ga0137389_10806052	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300012189\|Ga0137388_10689701	Not Available	948	Open in IMG/M
3300012189\|Ga0137388_11044342	Not Available	753	Open in IMG/M
3300012189\|Ga0137388_11399877	Not Available	638	Open in IMG/M
3300012199\|Ga0137383_10164195	Not Available	1627	Open in IMG/M
3300012202\|Ga0137363_10040182	All Organisms → cellular organisms → Bacteria	3292	Open in IMG/M
3300012202\|Ga0137363_10314389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1289	Open in IMG/M
3300012202\|Ga0137363_10510902	Not Available	1010	Open in IMG/M
3300012202\|Ga0137363_10738425	Not Available	834	Open in IMG/M
3300012203\|Ga0137399_10288592	Not Available	1353	Open in IMG/M
3300012203\|Ga0137399_10321270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1282	Open in IMG/M
3300012205\|Ga0137362_10116850	Not Available	2259	Open in IMG/M
3300012205\|Ga0137362_10151916	Not Available	1980	Open in IMG/M
3300012205\|Ga0137362_10172251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1858	Open in IMG/M
3300012205\|Ga0137362_10612578	Not Available	938	Open in IMG/M
3300012207\|Ga0137381_10207466	Not Available	1699	Open in IMG/M
3300012208\|Ga0137376_10924190	Not Available	749	Open in IMG/M
3300012211\|Ga0137377_10102612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2711	Open in IMG/M
3300012361\|Ga0137360_10457601	Not Available	1082	Open in IMG/M
3300012361\|Ga0137360_11294012	Not Available	630	Open in IMG/M
3300012361\|Ga0137360_11327568	Not Available	621	Open in IMG/M
3300012361\|Ga0137360_11506101	Not Available	577	Open in IMG/M
3300012362\|Ga0137361_10021089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	4965	Open in IMG/M
3300012683\|Ga0137398_10364034	Not Available	981	Open in IMG/M
3300012683\|Ga0137398_11091841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300012917\|Ga0137395_10391697	Not Available	994	Open in IMG/M
3300012917\|Ga0137395_10520328	All Organisms → cellular organisms → Bacteria → Proteobacteria	857	Open in IMG/M
3300012923\|Ga0137359_10660854	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300012924\|Ga0137413_10991801	Not Available	658	Open in IMG/M
3300012925\|Ga0137419_10384224	Not Available	1093	Open in IMG/M
3300012925\|Ga0137419_10637478	Not Available	859	Open in IMG/M
3300012927\|Ga0137416_10306581	Not Available	1318	Open in IMG/M
3300012930\|Ga0137407_10058509	All Organisms → cellular organisms → Bacteria → Proteobacteria	3160	Open in IMG/M
3300012930\|Ga0137407_10974161	Not Available	803	Open in IMG/M
3300012971\|Ga0126369_10181841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2010	Open in IMG/M
3300015245\|Ga0137409_10094962	All Organisms → cellular organisms → Bacteria	2771	Open in IMG/M
3300016319\|Ga0182033_11055448	Not Available	724	Open in IMG/M
3300016341\|Ga0182035_10744943	Not Available	856	Open in IMG/M
3300018468\|Ga0066662_12306849	Not Available	565	Open in IMG/M
3300020581\|Ga0210399_10132339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2054	Open in IMG/M
3300021086\|Ga0179596_10024162	All Organisms → cellular organisms → Bacteria → Proteobacteria	2254	Open in IMG/M
3300021086\|Ga0179596_10081050	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300021086\|Ga0179596_10114239	Not Available	1245	Open in IMG/M
3300021086\|Ga0179596_10274627	Not Available	836	Open in IMG/M
3300021086\|Ga0179596_10448450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	653	Open in IMG/M
3300021086\|Ga0179596_10489192	Not Available	624	Open in IMG/M
3300021086\|Ga0179596_10635241	Not Available	541	Open in IMG/M
3300021168\|Ga0210406_10135076	Not Available	2077	Open in IMG/M
3300021168\|Ga0210406_10506947	Not Available	953	Open in IMG/M
3300021478\|Ga0210402_10025789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5061	Open in IMG/M
3300021478\|Ga0210402_10032184	Not Available	4535	Open in IMG/M
3300021478\|Ga0210402_10239907	Not Available	1672	Open in IMG/M
3300021478\|Ga0210402_11076872	Not Available	731	Open in IMG/M
3300021560\|Ga0126371_10952187	Not Available	1001	Open in IMG/M
3300021560\|Ga0126371_11626809	Not Available	771	Open in IMG/M
3300024288\|Ga0179589_10182869	Not Available	909	Open in IMG/M
3300024288\|Ga0179589_10606424	Not Available	513	Open in IMG/M
3300024347\|Ga0179591_1238679	All Organisms → cellular organisms → Bacteria → Proteobacteria	3711	Open in IMG/M
3300026319\|Ga0209647_1333354	Not Available	513	Open in IMG/M
3300026320\|Ga0209131_1020501	All Organisms → cellular organisms → Bacteria	3974	Open in IMG/M
3300026320\|Ga0209131_1120616	Not Available	1360	Open in IMG/M
3300026340\|Ga0257162_1003631	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300026369\|Ga0257152_1018075	Not Available	752	Open in IMG/M
3300026371\|Ga0257179_1037689	Not Available	607	Open in IMG/M
3300026376\|Ga0257167_1045669	Not Available	669	Open in IMG/M
3300026481\|Ga0257155_1003047	Not Available	1964	Open in IMG/M
3300026496\|Ga0257157_1028817	Not Available	913	Open in IMG/M
3300026508\|Ga0257161_1095676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	617	Open in IMG/M
3300026551\|Ga0209648_10207522	Not Available	1488	Open in IMG/M
3300026555\|Ga0179593_1096451	All Organisms → cellular organisms → Bacteria → Proteobacteria	3031	Open in IMG/M
3300026555\|Ga0179593_1181291	Not Available	2386	Open in IMG/M
3300026557\|Ga0179587_10385338	Not Available	912	Open in IMG/M
3300027643\|Ga0209076_1116536	Not Available	755	Open in IMG/M
3300027874\|Ga0209465_10032446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2463	Open in IMG/M
3300027903\|Ga0209488_10033874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3728	Open in IMG/M
3300027903\|Ga0209488_10049880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3078	Open in IMG/M
3300027903\|Ga0209488_10053519	All Organisms → cellular organisms → Bacteria → Proteobacteria	2974	Open in IMG/M
3300027903\|Ga0209488_10054168	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	2955	Open in IMG/M
3300027903\|Ga0209488_10165687	Not Available	1669	Open in IMG/M
3300027903\|Ga0209488_10183011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1581	Open in IMG/M
3300027903\|Ga0209488_10265612	Not Available	1285	Open in IMG/M
3300027903\|Ga0209488_10387180	Not Available	1036	Open in IMG/M
3300027903\|Ga0209488_10797740	Not Available	669	Open in IMG/M
3300028536\|Ga0137415_10123984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	2429	Open in IMG/M
3300031912\|Ga0306921_10444509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1511	Open in IMG/M
3300032076\|Ga0306924_11440733	Not Available	733	Open in IMG/M
3300032892\|Ga0335081_12594551	Not Available	520	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.49%
Loam	Environmental → Terrestrial → Soil → Loam	4.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	74.02%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	65.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.02%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.66%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026369	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-A	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25613J43889_101319531	3300002907	Grasslands Soil	GQQLAGDAAMSLSAEQPGALAMLATSGYNGATQALLSAHGFDASLIAGLVNHGLATITAEKVRVGAKLIAIARVRITEAGREALGAI*
JGI25616J43925_101191861	3300002917	Grasslands Soil	MMEXRFGAEQRRALAMLATADRNGAPQALLSAHGFDASLIAGLVNRGLATLTAEKILAGGKLIAVAKARITKAGREALAAEGRCWPK*
Ga0066395_100699442	3300004633	Tropical Forest Soil	MPLNIEQRRALAMLAASGRAGVTQALLSAHGFDASLIAELVNHGLASLMAEKVSADGKPIAVVKARITDAGRNAVADES*
Ga0066388_1000761082	3300005332	Tropical Forest Soil	MTPLSIEKRRALAMLAASGRDGATQALLSAHGFDASLIAELVNHGLASLMAEKVSADGKLIAVVKARITDAGRDAVADES*
Ga0066388_1000959948	3300005332	Tropical Forest Soil	MLLSADQRRALATLSTAGPDGVAQALLSTYGFDASMIAGLVNRGLATLATEKVLASGKVSAVVVVSITEAGRRALAAED*
Ga0066692_104494181	3300005555	Soil	MSLTAEQRRALAMLATAGRDGVAQALLSAQGFDASLIAELVNLGLATLAAERVRAGGKLIAVAKVRITEAGRSAIEGLTEL*
Ga0066903_1000103752	3300005764	Tropical Forest Soil	MTVPHLSPEQRRALAMLATAGANGATQAVLSAHGFDASMIAGLVNQGLATLTAKKVLADGKLVAVAKARITEEGREPLGGGG*
Ga0066903_1046414711	3300005764	Tropical Forest Soil	MPLSIEKRRALAMLAASGRDGATQALLSAHGFDASLIAELVNHGLASLMAEKVSADGKLLAVVKARITDAGREAVADES*
Ga0099791_100586803	3300007255	Vadose Zone Soil	MMPFSADDRRAPAMLATSSHDGVAQAWLSAHGFDASMIAGLVTQGMATITAEKVRADGKLVAVAKVRITESGREALAASRSAP*
Ga0099791_100855983	3300007255	Vadose Zone Soil	MMGPRLTVEQRRALAMLATAGRNGAPQALLSAHGFDASLIAELVNHGLATLTAEKVRAGGKPLAVAKARITEAGREVLGAEG*
Ga0099791_102332781	3300007255	Vadose Zone Soil	RRALTMLADAGHNGAPQALLSAHGFDASVIAELVNRGLATLTAEKVRAGGKLIAVAKARSTEAGREAIAAED*
Ga0099793_101218052	3300007258	Vadose Zone Soil	MPEHRLSAEQRRALATLATSGPDGATQAVLSSHGFDASLIAGLVNRGLATITYERVRAGAKDVDVTKVRITEAGRDALGAI*
Ga0099793_101758401	3300007258	Vadose Zone Soil	EADSRAATMSLTADQRRALAMLATAGPDGVAQSLLSAHGFDATMIAGLVNRGLATLTMEKVRADGKLIAVAMVRITEAGRRALAAAG*
Ga0099793_102843721	3300007258	Vadose Zone Soil	MMPLTAEQRRALTVLADAGHNGAPQALLSAHGFDASVIAELVNRGLATLTAEKVRAGGKLIAVAKARITEAGREAI
Ga0099793_103340152	3300007258	Vadose Zone Soil	MLATAGQAGVAQALVSAHGFEAIMIAGLVHRRLATLTMGKVLASGKLTAVAMVRITEAGRRVLAAAG*
Ga0099793_104266421	3300007258	Vadose Zone Soil	QPGALAMLATSGYNGATQALLSAHGFDASLIAGLVNHGLATITAEKVRVGAKLIAIARVRITEAGREALGAI*
Ga0099795_102054491	3300007788	Vadose Zone Soil	QAAMTGPRLTPEQRRALAMLATADRNGAPQALLSAHGFDASLIARLVNRGLATLTAEKILAGGKLIAVAKARITKAGREALAAEGR*
Ga0099795_105951871	3300007788	Vadose Zone Soil	LEPMMPLSADQRRALVMLATAGQAGVAQALVSAHGFEAIMIAGLVHRRLATLTMGKVLASGKLTAVAMVRITEAGRRVLAAAG*
Ga0099829_100230202	3300009038	Vadose Zone Soil	MMEHRFGAEQRRALAMLATADRNGAPQALPSAHGFDASLIAGLVNRGLATLTAEKILAGGKLIAVAKARITKAGREALAAEGR*
Ga0099829_101318122	3300009038	Vadose Zone Soil	MTGPRLTVEQRRALAMLATAGRNGAPQALLSAHGFDASFIAELVNHGLATLSAEKVRAGGKLIAVAKARITDAGRDAIAGEG*
Ga0099829_108638521	3300009038	Vadose Zone Soil	MTEPRLTAERRRALAMLATAGRNGAPQALLSAHGFDASMIAELVNRGLATLMAEKVRAGGKLIAVAKVRITEAGQDALAERAPIRVGGRRLII*
Ga0099828_100175668	3300009089	Vadose Zone Soil	MTESRLTAERRRALAMLATAGRNGAPQALLSAHGFDASMIAELVNRGLATLMAEKVRAGGKLIAVAKVRITEAGQDALAERAPIRVGGRRLII*
Ga0099792_100237502	3300009143	Vadose Zone Soil	MTFPRLTAEQRRALAMLATSGHNGATRAPLSAHGFDASLIAELVNHGLATLTAEKVRAGGRLIAVAKARITETGREVDR*
Ga0099792_100591841	3300009143	Vadose Zone Soil	MMEHRFGAEQRRALAMLATADRNGAPQALLSAHGFDASLIAGLVNRGLATLTAEKILDGGKLIAVAKARITAAGREALASED*
Ga0099792_104589342	3300009143	Vadose Zone Soil	MSLTADQRRALAMLATAGPDGVAQSLLSAHGFDATMIAGLVNRGLATLTMEKVRADGKLIAVAMVRITEAGRRALAAAG*
Ga0099792_105215272	3300009143	Vadose Zone Soil	MMLLSADQRRALAMLSTAGQDGTAQALLSAHGLDATMIAGLVSRGLATLTMEKVRASGKLIAVATVRITEAGRRALAAED*
Ga0099792_108520231	3300009143	Vadose Zone Soil	MMPLTAEQRRALTMLADAGHNGAPQALLSAHGFDASMIAELVNRGLATLTAEKVRAGGKLIAVAKARITEAGREAIAAED*
Ga0126380_109460951	3300010043	Tropical Forest Soil	PLSIEKRRALAMLAASGRDGATQALLSAHGFDASLIAELVNHGLASLMAEKVSADGKLIAVVKARITDAGRDAVADES*
Ga0126384_100573822	3300010046	Tropical Forest Soil	MMPLNIEQRRALAMLAASGRAGVTQALLSAHGFDASLIAELVNHGLASLMAEKVSADGKPIAVVKARITDAGRNAVADES*
Ga0126382_102454902	3300010047	Tropical Forest Soil	MMPLSADQRHVLATLATAGRDGMAQALLSAQGFDASMIAGLVHRGLAILTTEKILASGKPTALVMVTITEAGRRAFATEDMSHRDRAAAGYAR*
Ga0126373_128412531	3300010048	Tropical Forest Soil	MLAASGRDGATQALLSAHGFDASLIAELVNHGLASLMAEKVSADGKLIAVVKARITDAGRDAVADES*
Ga0126370_118136391	3300010358	Tropical Forest Soil	MMPLSAVQRRALAMLSTAGRDGVAQALLITNGFDASTIAGLVNRGLSILTTEKVRASGKVIAVAMVTITEAGHRALAAKD*
Ga0126376_107891352	3300010359	Tropical Forest Soil	MLLSADQRRALATLSTAGPDGVAQALLSTYGFDASMIAGLVNRGLATLATEKVLASGKVTAVVVVSITEAGRRALAAED*
Ga0126379_121372862	3300010366	Tropical Forest Soil	MTVPHLSPEQRRALAMLATASANGATQAVLSAHGFDASMIAGLVNQGLATLTAEKVLADGKLVAVAKARITEERRLFGGGS*
Ga0126383_106161811	3300010398	Tropical Forest Soil	MMPLNIEQRRALAMLAASGRAGVTQALLSAHGFDASLIAELVNHGLASLMAEKVSADGKPIAVVKARITDAGRNAVADES
Ga0137392_102258452	3300011269	Vadose Zone Soil	MIPGTDQRHALAMLATAGRNRATQALLSAHGFDASMIADLVNHGLETLTAEKLRAGGKLIAVAKVRITEAGRDALAAEG*
Ga0137391_107606131	3300011270	Vadose Zone Soil	MMEHRFGAEQRRALAMLATADRNGAPQALLSAHGFDASLIAGLVNRGLATLTAEKVLAGGKLIAVAKARITEAGREALAAEGR*
Ga0137393_102295182	3300011271	Vadose Zone Soil	MMEHRFGAEQRRALAMLATADRNGAPQALLSAHGFDASLIAGLVNRGLATLTAEKILAGGKLIAVAKARITKAGREALAAEGR*
Ga0137389_101771992	3300012096	Vadose Zone Soil	MERLTAEQRRALAMLATAGRNGVPQVLLSAHGFDASMIAELVNHGLATLAAEKVRAGGKLMAVGKVTITAAGQDALAAEG*
Ga0137389_102608032	3300012096	Vadose Zone Soil	MTFPRLTAEQRRALAMLATSGHNGATRAPLSAHGFDASLIAELVNPGLATLTAEKVRAGGRLIAVAKARITETGREVDR*
Ga0137389_108060522	3300012096	Vadose Zone Soil	MSLTAEQRRALAMLATSGHNGATQALLSAHGFDASLIAELVNHGLATLTAEKVRAGGKLIAVAKARITEAGREALAADRW*
Ga0137388_106897011	3300012189	Vadose Zone Soil	MLASAGRNGVTQALLSAHGFDASLIAELVNHGLATLTAEKVRAGGKLIAVAKVRITEAGREALAADRW*
Ga0137388_110443423	3300012189	Vadose Zone Soil	MSLTAEQRRALAVLATAGRNGATQALLSAHGFDASMIAGLVNRGMATITAEKVRAGGKLIAVAKALGFGRASVYG*
Ga0137388_113998771	3300012189	Vadose Zone Soil	DDRRAPAMLATSGHDGVAQAWLSAHGFDASMIAGLVTQGMATITAEKVRADGKLVAVANVRITESGREALADSRSAP*
Ga0137383_101641953	3300012199	Vadose Zone Soil	MMSVPGLNVEQRRALDMLASAGRNGAPQALLSAHGFDGSLIAELVNQGLAMLMAERVRAGGKLLAVAKARITEAGRGALAGEG*
Ga0137363_100401822	3300012202	Vadose Zone Soil	MMALSADQRRALAMLATAGQDGLAQALLSAHGFDATMIAGLVNRGLATLTMEKVRADGKLIAVAMVRITEAGRRALAAAG*
Ga0137363_103143893	3300012202	Vadose Zone Soil	MTGPRLTVEQRRALAMLATAGRNGAPQALLSAHDFDASLIAELVNHGLATLTAEKVRAGGKLIAVAKARITDAGREALAAQD*
Ga0137363_105109022	3300012202	Vadose Zone Soil	MLATSGYNGATQALLSAHGFDASLIAGLVNHGLATITAEKVRVGAKLIAIARVRITEAGREALGAI*
Ga0137363_107384252	3300012202	Vadose Zone Soil	MSLTAEQRRALAMLGTVGRNGVPQALLSAHGFDATLIAELVNHGLATITAERVRASGKLIAVAKVRIPIP*
Ga0137399_102885923	3300012203	Vadose Zone Soil	MSLSAEQPGALAMLATSGYNGATQALLSAHGFDASLIAGLVNHGLATITAEKVRVGAKLIAIARVRITEAGREALGAI*
Ga0137399_103212702	3300012203	Vadose Zone Soil	MMPLTAEQRRALTMLADAGHNGAPQALLSAHGFDASMIAELVNRGLATLTAEKVRAGGKLIAVAKARITEAGRAGGDRS*
Ga0137362_101168503	3300012205	Vadose Zone Soil	MMHFSADDRRALAMLATSGHDGVAQAWLSAHGFDASMIAGLVTQGMATITAEKVRADGKLVAVAKVRITESGREALAASRSAP*
Ga0137362_101519162	3300012205	Vadose Zone Soil	MSLSAEQPGALAMLATSGYNGATLALLSAHGFDASLIAGLVNHGLATITAEKVRVGAKLIAIARVRITEAGREALGAI*
Ga0137362_101722515	3300012205	Vadose Zone Soil	MMEHRFGAEQRRALAMLATADRNGAPQALLSAHGFDASLIAGLVNRGLATLTAEKILDGGKLIAVAKARITAAGREALACED*
Ga0137362_106125781	3300012205	Vadose Zone Soil	MMLLCADQRRVLAMLATAGQDGVAQALLSAHGFDATMIAGLVNRGLATLMMEKVRADGKLIAIAMVRITEAGRRVLAAAG*
Ga0137381_102074664	3300012207	Vadose Zone Soil	MMSVPGLNVEQRRALDMLASAGRNGAPQALLSAHGFDGSLIAELVNQGLAMLMAERVRAGGKLIAVAKARITEAGRGALAGEG*
Ga0137376_109241902	3300012208	Vadose Zone Soil	MSLSTEQRGALAMLATSGYNGATQALLSAHGFDASLIAGLVNHGLATITAEKVRVAAKLIVIARVRITEAGREALAGEG*
Ga0137377_101026122	3300012211	Vadose Zone Soil	MSLSAEQPGALAMLATSGYNGATQALLSAHGFDASLIAGLVNHGLATITAEKVRVAAKLIVIARVRITEAGREALAGEG*
Ga0137360_104576012	3300012361	Vadose Zone Soil	MLATSGYNGATQVLLSADGFDASLIAGLVNHGLTTITAEKVRVGGKLIAVARVRITEAGRRAIGG*
Ga0137360_112940122	3300012361	Vadose Zone Soil	MLASAGRNGVTQALLSAHGFDASLIAELVNHGLATLTAEKVRAGGKLIAVAKARITEAGREALAADRW*
Ga0137360_113275681	3300012361	Vadose Zone Soil	MTVHLNPEQRGALAKLATAGPNGATQALLSAYGFDASMIAGLVNRGLVTLKAEKVRADGKLIAVATARITGTGGS*
Ga0137360_115061012	3300012361	Vadose Zone Soil	MMHFSADDRRALAMLATSGHDGVAQAWLSAHGFDASMIAGLVTQGMATITAEKVRADGKLVAVAKVRITESGREALAASRSAL*
Ga0137361_1002108910	3300012362	Vadose Zone Soil	MSLSAEQRGALAMLATSGYNGATQVLMSADGFDASFIAELVSHGLASITAEKVRVGAKLIAVARVRITEAGREALGAI*
Ga0137398_103640343	3300012683	Vadose Zone Soil	MMEHRFGAEQRSALAMLATADRNGAPQALLSAHGFDASLIAGLVNRGLATLTAEKILDGGKLIAVAKARITAAGREALACED*
Ga0137398_110918411	3300012683	Vadose Zone Soil	MMPLSADQRRALVMLATAGQAGVARALLSAHGFDAIMIAGLVHRGLATLTMEKVRASGKLIAVATVRITEAGRRALAAED*
Ga0137395_103916971	3300012917	Vadose Zone Soil	MMEHRFGAEQRRALAMLATADRNGAPQALPSAHGFDASLIAGLVNRGLATLTAEKVLAGGKLIAVAKARITEAGREALAAEGR*
Ga0137395_105203281	3300012917	Vadose Zone Soil	MMPFSADDRRAPAMLATSGHDGVAQAWLSAHGFDASMIAGLVTQGIATITAEKVRADGKLVAVAKVRITESGREALAASRSAP*
Ga0137359_106608542	3300012923	Vadose Zone Soil	MSLSAEQPGALAMLATSGYNGATLALLSAHGFDASLIAGLANHGLATITAEKVRVGAKLIAIARVRITEAGREALGAI*
Ga0137413_109918012	3300012924	Vadose Zone Soil	MMEHRFGAEQRRALAMLATADRNGAPQALLSAHGFDASLIAGLVNRGLATLTAEKILAGGKLIAVAKARITKAGREALAAEGRCWPK*
Ga0137419_103842241	3300012925	Vadose Zone Soil	MMPFSADDRRAPAMLATSGHDGVAQAWLSAHGFDASMIAGLVTQGMATITAEKVRADGKLVAVAKVRITESGREALAASRSAL*
Ga0137419_106374781	3300012925	Vadose Zone Soil	MLATAGLNGAPQALLSAHGFDASLIAGLVDRGLATLTAEKVRAGGKLIEVGKVRITEAGREALAADRW*
Ga0137416_103065811	3300012927	Vadose Zone Soil	MLATADRNGAPQALLSAHGFDASLIAGLVNRGLATLTAEKILAGGKLIAVAKARITKAGREALAAEGR*
Ga0137407_100585092	3300012930	Vadose Zone Soil	MSLTAEQRRALAMLATAGRDGVAQALLSAQGFDASLIAELVNLGLATLAAERVRAGSKLIAVAKVRITEAGRSAIEGLTEL*
Ga0137407_109741612	3300012930	Vadose Zone Soil	MSLSAEQPGALAMLATSGYNGATQVLLSADGFDASLIAGLGNRGLTTITAEKVRVGGKLIAVARVLG*
Ga0126369_101818412	3300012971	Tropical Forest Soil	MRGSMMPLNIEQRRALAMLAASGRAGVTQALLSAHGFDASLIAELVNHGLASLMAEKVSADGKPIAVVKARITDAGRNAVADES*
Ga0137409_100949624	3300015245	Vadose Zone Soil	MTEPRLSTEQRRALAMLATADRNGAPQALLSAHGFDASLIAGLVNRGLATLTAEKILAGGKLIAVAKARITEARREALAADR*
Ga0182033_110554481	3300016319	Soil	PMMTLPRLTAEQRRALATLATAGRNGATQPLLTAHGFSVAMITDLVNRGLATLTHEKVRAGGKLIDVGKVRITDAARDALAAEA
Ga0182035_107449431	3300016341	Soil	MTSRRLTAEQRCALAMLATAGRDGVAQALLSAHGFDASLIAELVNQGFATLSAKKVRAGGKLVAVAKAR
Ga0066662_123068492	3300018468	Grasslands Soil	MSLTAEQRCALAVLATSGYNGVTQAPLSAHGFDASMIADLVNHGLATLTAEKVRAGAKLIAIARVRITEAGREALGAI
Ga0210399_101323393	3300020581	Soil	MTWPRLTAEQRLALAMLAGAGLNGSTQVLLSAHGFDASMIAGLVSQGLATLTAENVRADGKLVAVVQVRITEAGRDALAGEG
Ga0179596_100241624	3300021086	Vadose Zone Soil	MPEHRLSAEQRRALATLATSGPDGATQAVLSSHGFDASLIAGLVNRGLATITYERVRAGAKDVDVTKVRITEAGRDALGAI
Ga0179596_100810502	3300021086	Vadose Zone Soil	MMEHRFGAEQRRALAMLATADRNGAPQALLSAHGFDASLIAGLVNRGLATLTAEKILDGGKLIAVAKARITAAGREALACED
Ga0179596_101142392	3300021086	Vadose Zone Soil	MPLSADQRRALVMLATAGQAGVAQALVSAHGFEAIMIAGLVHRRLATLTMGKVLASGKLTAVAMVRITEAGRRVLAAAG
Ga0179596_102746271	3300021086	Vadose Zone Soil	SNPGALAMLATSGYNGATQALLSAHGFDASLIAGLVNHGLATITAEKVRVGAKLIAIARVRITEAGREALGAI
Ga0179596_104484502	3300021086	Vadose Zone Soil	MTGPRLTVEQRRALAMLATAGRNGAPQALLSAHGFDASFIAELVNHGLATLSAEKVRAGGKLIAVAKARITDAGRDAIAGEG
Ga0179596_104891922	3300021086	Vadose Zone Soil	MMEHRFGAEQRRALAMLATADRNGAPQALLSAHGFDASLIAGLVNRGLATLTAEKILAGGKLIAVAKARITKAGREALAAEGR
Ga0179596_106352411	3300021086	Vadose Zone Soil	MTEPRLTAERRRALAMLATAGRNGAPQALLSAHGLDASMIAELVNRGLATLMAEKVRAGGKLIAVAKVRITEAGQDALAERAPIRVGGRRLII
Ga0210406_101350762	3300021168	Soil	MTEPRLISERRRAPAMLATAGRNGALQALLSAHGFDASMIAELVNRGLATLTAEKVRAGGKLIAVAKVRITEAGQDVLAERAPLRVGGRRLII
Ga0210406_105069471	3300021168	Soil	MSLTAEQRRALAMLATAGRNGATQPLLTAHGFSVSMIAEVVNCGLLTLTPEKVRAGGRMVDAGKVRITDAGRTA
Ga0210402_100257894	3300021478	Soil	MSLTAEQRRALAMLATAGRNGATQPLLTAHGFSVSMIAEVVNCGLLTLTPEKVRAGGRMVDAGKVRITDAGRTALAES
Ga0210402_100321844	3300021478	Soil	MTEPRLISERRRAPAMLATAGRNGALQALLSAHGFDASMIAELVNRGLATLTAEKVRAGGKLIAVAKVRITEAGQDVLAERAPLRDGGRRLII
Ga0210402_102399072	3300021478	Soil	MTSPRLTAEQRLALAMLAGAGGNGATQALLSAHGFDASMITGLVSHGLATITAEKVRAGRKPVTVVQVRITDAGRAALAES
Ga0210402_110768721	3300021478	Soil	MTSPRLDAEQRRALAMLATAGRNGTTQALLSAHGFDASMIAGLVSHGLATITAEKVRAGGKLVAVVQVRITEAGRDALAGEG
Ga0126371_109521872	3300021560	Tropical Forest Soil	MTVPHLSPEQRRALAMLATAGANGATQAVLSAHGFDASMIAGLVNQGLATLTAKKVLADGKLVAVAKARITEEGREPLGGGG
Ga0126371_116268091	3300021560	Tropical Forest Soil	MPLSIEKRRALAMLAASGRDGATQALLSAHGFDASLIAELVNHGLASLMAEKVSADGKLLAVVKARITDAGREAVADES
Ga0179589_101828692	3300024288	Vadose Zone Soil	MSLSAEQPGALAMLATSGYNGATQALLSAHGFDASLIAGLVNHGLATITAEKVRVGAKLIAIARVRITEAGREALGAI
Ga0179589_106064241	3300024288	Vadose Zone Soil	HQAAMTGPRLTPEQRRALAMLATADRNGAPQALLSAHGFDASLIAGLVNRGLATLTAEKILDGGKLIAVAKARITAAGREALASED
Ga0179591_12386798	3300024347	Vadose Zone Soil	MMPLTAEQRRALTMLADAGHNGAPQALLSAHGFDASMIAELVNRGLATLTAEKVRAGGKLIAVAKARITEAGAGGDRS
Ga0209647_13333542	3300026319	Grasslands Soil	MSLSAEQPGALAMLATSGYNGATQALLSAHGFDASLIAGLVNLGLATITAEKVRVGAKLIAIARVRITEAGREALGAI
Ga0209131_10205013	3300026320	Grasslands Soil	MSLTADQRRALAMLATAGPDGVAQSLLSAHGFDATMIAGLVNRGLATLTMEKVRADGKLIAVAMVRITEAGRRALAAAG
Ga0209131_11206162	3300026320	Grasslands Soil	MMEHRFGAEQRRALAMLATADRNGAPQALLSAHGFDASLIAGLVNRGLATLTAEKILDGGKLIAVAKARITAAGREALASED
Ga0257162_10036314	3300026340	Soil	MTGPRLTPEQRRALAMLATADRNGAPQALLSAHGFDASLIAGLVNRGLATLTAEKILDGGKLIAVAKARITAAGREALACED
Ga0257152_10180751	3300026369	Soil	MSLSAEQPGALAMLATSGYNGATQALLSAHGFDASLIAGLVNHGLATITAEKVRVGAKLIAIARVRIT
Ga0257179_10376891	3300026371	Soil	MEHRFGAEQRRALAMLATADRNGAPQALLSAHGFDASLIAGLVNRGLATLTAEKILDGGKLIAVAKARITAAGREALACED
Ga0257167_10456691	3300026376	Soil	MLLSADQRRALVMLATAGQAGVARALLSAHGFDAIMIAGLVHRGLATLTMEKVLASGKLTAVAMVRITEAGRRVLAAAG
Ga0257155_10030475	3300026481	Soil	MTEPRLTSERRRALAMLATAGRNGALQALLSAHGFDASMIAELVNRGLATLTAEKVRAGGKLIAVAKVRITEAGQDALAERAPIRVGGRRLIA
Ga0257157_10288171	3300026496	Soil	MTGPRLTPEQRRALAMLATADRNGAPQALLSAHGFDASLIAGLVNRGLATLTAEKILDGGKLIAVAKARI
Ga0257161_10956761	3300026508	Soil	MLLSADQRRALVMLATAGQAGVARALLSAHGFDAIMIAGLVHRGLATLTMEKVLASGKLTAVAMVRITEARRRVLAAAG
Ga0209648_102075223	3300026551	Grasslands Soil	MTKPRLSAEQVIVAIPRLTAGPNGATQALLSAHGFDANLIAELVNRGMATITAEKVRAGGKLMAVAKARITDAGRDALAEG
Ga0179593_10964511	3300026555	Vadose Zone Soil	MMGPRLTVEQRRALAMLATAGRNGAPQALLSAHGFDASLIAELVNHGLATLTAEKVRAGGKPLAVAKARITEAGREVLGAEG
Ga0179593_11812911	3300026555	Vadose Zone Soil	MMGPRLTVEQRRALAMLATAGRNGAPQALLSAHGFDASLIAELVNHGLATLTAEKVRAGGKPLAVAKARITEAGREVLGPKVDFGQRGFQSDYFVCFG
Ga0179587_103853382	3300026557	Vadose Zone Soil	MMPFSADDRRAPAMLATSSHDGVAQAWLSAHGFDASMIAGLVTQGMATITAEKVRADGKLVAVAKVRITESGREALAASRSAP
Ga0209076_11165361	3300027643	Vadose Zone Soil	QPGALAMLATSGYNGATQALLSAHGFDASLIAGLVNHGLATITAEKVRVGAKLIAIARVRITEAGREALGAI
Ga0209465_100324463	3300027874	Tropical Forest Soil	MPLNIEQRRALAMLAASGRAGVTQALLSAHGFDASLIAELVNHGLASLMAEKVSADGKPIAVVKARITDAGRNAVADES
Ga0209488_100338746	3300027903	Vadose Zone Soil	MMSVRPLSVEQRAALDMLATAGRNGVTQALLSAHGFDASLIAELVNHGLATLTAEKVRAGGKLIAVAKVRITEAGREAIEGGAVD
Ga0209488_100498806	3300027903	Vadose Zone Soil	MTSPRLSAEQRRALELLATADRDGVPQALLSAHGFDASLIAELVDRGLATLTAEKVRAGGKLIAVTKARITAAGREALAADP
Ga0209488_100535191	3300027903	Vadose Zone Soil	MTFPRLTAEQRRALAMLATSGHNGATRAPLSAHGFDASLIAELVNHGLATLTAEKVRAGGRLIAVAKARITETGREVDR
Ga0209488_100541685	3300027903	Vadose Zone Soil	MTEPRLTAERRRALAMLATAGRNGAPQALLSAHGFDASMIAELVNRGLATLMAEKVRAGGKLIAVAKVRITEAGQDALAERAPIRVGGRRLII
Ga0209488_101656874	3300027903	Vadose Zone Soil	MSVPSLSVEQRRALDMLASAGRNGVTQALLSAHGFDASLIAELVNHGLATLTAEKVRAGGKLIAVAKARITEAGRVALAADRW
Ga0209488_101830113	3300027903	Vadose Zone Soil	MMPLTAEQRRALTMLADAGHNGAPQALLSAHGFDASMIAELVNRGLATLTAEKVRAGGKLIAVAKARITEAGREAIAAED
Ga0209488_102656122	3300027903	Vadose Zone Soil	MTGPRLTPEQRRALAMLATADRNGAPQALLSAHGFDASLIAGLVNRGLATLTAEKILAGGKLIAVAKARITKAGREALAAEGR
Ga0209488_103871802	3300027903	Vadose Zone Soil	MMEHRFGAEQRRALAMLATADRNGAPQALLSAHGFDASLIAGLVNRGLATLTAEKILDGGKLIAVAKARITATGREALASE
Ga0209488_107977402	3300027903	Vadose Zone Soil	MSLTAEQHRALAMLATAHRNGVPQVLLSAHGFDASLIAELVNRGLATLTAEKVGAGGKLIAVAKVRITEAGRQADRWKNPAG
Ga0137415_101239845	3300028536	Vadose Zone Soil	MSLTAEQRCALAVLATSGYNGVTQAPLSAHGFDASMIADLVNHGLATLTAEKVRAGAKLIAIARVRITEAGREALGGI
Ga0306921_104445091	3300031912	Soil	MMTLPRLTAEQRRALATLATAGRNGATQPLLTAHGFSVAMITDLVNRGLATLTHEKVRAGGKLIDVGKVRITDAARDALAAEA
Ga0306924_114407331	3300032076	Soil	MTSRRLTAEQRCALAMLATAGRDGVAQALLSAHGFDASLIAELVNQGFATLSAKKVRAGGKLVAVAKARITAAGR
Ga0335081_125945512	3300032892	Soil	MRLLSADQRRILAMLLPAGSAGIAQPALSAQGYDASMIADLVNRGLATLTTERLRDDGKLTAVAMVKITETGRRALTAEE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065456

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences