NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F065622

Metagenome / Metatranscriptome Family F065622

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F065622
Family Type Metagenome / Metatranscriptome
Number of Sequences 127
Average Sequence Length 40 residues
Representative Sequence DNLDVFDQSGAPVASAGLITSTQTPSRQIQFALKLIW
Number of Associated Samples 105
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.79 %
% of genes near scaffold ends (potentially truncated) 98.43 %
% of genes from short scaffolds (< 2000 bps) 90.55 %
Associated GOLD sequencing projects 96
AlphaFold2 3D model prediction Yes
3D model pTM-score0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (95.276 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(33.858 % of family members)
Environment Ontology (ENVO) Unclassified
(33.858 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.331 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 23.08%    β-sheet: 3.08%    Coil/Unstructured: 73.85%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.25
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 127 Family Scaffolds
PF13620CarboxypepD_reg 4.72
PF00916Sulfate_transp 3.94
PF00486Trans_reg_C 3.15
PF13442Cytochrome_CBB3 2.36
PF02239Cytochrom_D1 1.57
PF09084NMT1 1.57
PF01494FAD_binding_3 1.57
PF02518HATPase_c 1.57
PF00753Lactamase_B 1.57
PF04014MazE_antitoxin 1.57
PF04545Sigma70_r4 1.57
PF00072Response_reg 0.79
PF00206Lyase_1 0.79
PF13085Fer2_3 0.79
PF13115YtkA 0.79
PF08281Sigma70_r4_2 0.79
PF00078RVT_1 0.79
PF13592HTH_33 0.79
PF12705PDDEXK_1 0.79
PF04542Sigma70_r2 0.79
PF01322Cytochrom_C_2 0.79
PF00270DEAD 0.79
PF13360PQQ_2 0.79
PF14559TPR_19 0.79
PF07485DUF1529 0.79
PF01850PIN 0.79
PF13560HTH_31 0.79
PF02517Rce1-like 0.79
PF13531SBP_bac_11 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 127 Family Scaffolds
COG0659Sulfate permease or related transporter, MFS superfamilyInorganic ion transport and metabolism [P] 3.94
COG2233Xanthine/uracil permeaseNucleotide transport and metabolism [F] 3.94
COG2252Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) familyNucleotide transport and metabolism [F] 3.94
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 3.15
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 1.57
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 1.57
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 1.57
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.57
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.57
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.79
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.79
COG1266Membrane protease YdiL, CAAX protease familyPosttranslational modification, protein turnover, chaperones [O] 0.79
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.79
COG3909Cytochrome c556Energy production and conversion [C] 0.79
COG4449Predicted protease, Abi (CAAX) familyGeneral function prediction only [R] 0.79
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.79

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.28 %
UnclassifiedrootN/A4.72 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001154|JGI12636J13339_1035396All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300001545|JGI12630J15595_10049972All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium837Open in IMG/M
3300002557|JGI25381J37097_1029952All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia932Open in IMG/M
3300005172|Ga0066683_10408191All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae838Open in IMG/M
3300005178|Ga0066688_10742235All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae619Open in IMG/M
3300005445|Ga0070708_100792404All Organisms → cellular organisms → Bacteria891Open in IMG/M
3300005446|Ga0066686_10168865All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1454Open in IMG/M
3300005447|Ga0066689_10286682All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1019Open in IMG/M
3300005540|Ga0066697_10202928All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1178Open in IMG/M
3300005541|Ga0070733_10081874All Organisms → cellular organisms → Bacteria2043Open in IMG/M
3300005557|Ga0066704_10687782All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae646Open in IMG/M
3300005561|Ga0066699_10552605All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300005568|Ga0066703_10643219All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300005569|Ga0066705_10665950All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae631Open in IMG/M
3300005586|Ga0066691_10859700All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300005598|Ga0066706_10228701All Organisms → cellular organisms → Bacteria1440Open in IMG/M
3300005764|Ga0066903_106516403All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300006034|Ga0066656_11076073All Organisms → cellular organisms → Bacteria → Acidobacteria517Open in IMG/M
3300006162|Ga0075030_100292509All Organisms → cellular organisms → Bacteria1303Open in IMG/M
3300006162|Ga0075030_101121365All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae619Open in IMG/M
3300006791|Ga0066653_10605243All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae557Open in IMG/M
3300006794|Ga0066658_10201709All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1052Open in IMG/M
3300006804|Ga0079221_11740590All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300006903|Ga0075426_10046243All Organisms → cellular organisms → Bacteria → Acidobacteria3110Open in IMG/M
3300006904|Ga0075424_100439500All Organisms → cellular organisms → Bacteria1392Open in IMG/M
3300007076|Ga0075435_100084349All Organisms → cellular organisms → Bacteria2614Open in IMG/M
3300009012|Ga0066710_101619776All Organisms → cellular organisms → Bacteria → Acidobacteria991Open in IMG/M
3300009012|Ga0066710_101931786All Organisms → cellular organisms → Bacteria881Open in IMG/M
3300009038|Ga0099829_10826271All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium769Open in IMG/M
3300009088|Ga0099830_10853562All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium752Open in IMG/M
3300009137|Ga0066709_101890755All Organisms → cellular organisms → Bacteria → Acidobacteria831Open in IMG/M
3300009137|Ga0066709_102578892All Organisms → cellular organisms → Bacteria → Acidobacteria682Open in IMG/M
3300010329|Ga0134111_10337794All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium634Open in IMG/M
3300010359|Ga0126376_10846089All Organisms → cellular organisms → Bacteria898Open in IMG/M
3300010398|Ga0126383_13601359All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300011120|Ga0150983_12956706All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium570Open in IMG/M
3300011270|Ga0137391_10419613All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1141Open in IMG/M
3300011270|Ga0137391_11532331All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300011271|Ga0137393_10472470All Organisms → cellular organisms → Bacteria → Acidobacteria1075Open in IMG/M
3300011271|Ga0137393_11585975Not Available544Open in IMG/M
3300012096|Ga0137389_11719787All Organisms → cellular organisms → Bacteria → Acidobacteria523Open in IMG/M
3300012198|Ga0137364_11466954All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300012199|Ga0137383_10391380All Organisms → cellular organisms → Bacteria → Acidobacteria1018Open in IMG/M
3300012200|Ga0137382_11236672All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300012202|Ga0137363_10428865All Organisms → cellular organisms → Bacteria1104Open in IMG/M
3300012202|Ga0137363_10672794All Organisms → cellular organisms → Bacteria → Acidobacteria875Open in IMG/M
3300012207|Ga0137381_10705184All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium877Open in IMG/M
3300012211|Ga0137377_10729702All Organisms → cellular organisms → Bacteria → Acidobacteria925Open in IMG/M
3300012211|Ga0137377_11715183All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium549Open in IMG/M
3300012359|Ga0137385_10270870All Organisms → cellular organisms → Bacteria1466Open in IMG/M
3300012362|Ga0137361_11262152All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300012363|Ga0137390_11770843All Organisms → cellular organisms → Bacteria → Acidobacteria550Open in IMG/M
3300012363|Ga0137390_12002951All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium505Open in IMG/M
3300012683|Ga0137398_10511386All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium826Open in IMG/M
3300012683|Ga0137398_11172986All Organisms → cellular organisms → Bacteria → Acidobacteria526Open in IMG/M
3300012918|Ga0137396_10047961All Organisms → cellular organisms → Bacteria → Acidobacteria2918Open in IMG/M
3300012918|Ga0137396_10667634All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium767Open in IMG/M
3300012918|Ga0137396_11163255All Organisms → cellular organisms → Bacteria → Acidobacteria547Open in IMG/M
3300012918|Ga0137396_11252599All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium519Open in IMG/M
3300012923|Ga0137359_10819259All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium806Open in IMG/M
3300012924|Ga0137413_10242448Not Available1233Open in IMG/M
3300012925|Ga0137419_10731435All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium805Open in IMG/M
3300012925|Ga0137419_10766281All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium787Open in IMG/M
3300012925|Ga0137419_10967627All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300012944|Ga0137410_10627926All Organisms → cellular organisms → Bacteria → Acidobacteria890Open in IMG/M
3300012971|Ga0126369_11032964All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300014154|Ga0134075_10522631All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300014162|Ga0181538_10736898Not Available509Open in IMG/M
3300014489|Ga0182018_10302163All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium870Open in IMG/M
3300014968|Ga0157379_12100902All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium560Open in IMG/M
3300015052|Ga0137411_1049868All Organisms → cellular organisms → Bacteria3288Open in IMG/M
3300015054|Ga0137420_1066637All Organisms → cellular organisms → Bacteria → Acidobacteria3345Open in IMG/M
3300015054|Ga0137420_1135706All Organisms → cellular organisms → Bacteria → Acidobacteria1166Open in IMG/M
3300015264|Ga0137403_10050727All Organisms → cellular organisms → Bacteria4279Open in IMG/M
3300015357|Ga0134072_10097832All Organisms → cellular organisms → Bacteria898Open in IMG/M
3300016404|Ga0182037_11589374All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300016422|Ga0182039_10363248All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1219Open in IMG/M
3300017937|Ga0187809_10326719All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300017994|Ga0187822_10002158All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4058Open in IMG/M
3300018007|Ga0187805_10205557All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium OLB18900Open in IMG/M
3300018468|Ga0066662_12382385All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium557Open in IMG/M
3300020170|Ga0179594_10414404All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium511Open in IMG/M
3300020199|Ga0179592_10229431All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium837Open in IMG/M
3300020580|Ga0210403_10431217Not Available1075Open in IMG/M
3300020580|Ga0210403_10672401All Organisms → cellular organisms → Bacteria831Open in IMG/M
3300020581|Ga0210399_10333024All Organisms → cellular organisms → Bacteria1267Open in IMG/M
3300021088|Ga0210404_10019981All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2868Open in IMG/M
3300021088|Ga0210404_10791445All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300021170|Ga0210400_11643109All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M
3300021171|Ga0210405_11193723All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300021178|Ga0210408_10216925All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1522Open in IMG/M
3300021180|Ga0210396_11127992All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium OLB18659Open in IMG/M
3300021432|Ga0210384_10671720All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium928Open in IMG/M
3300021559|Ga0210409_10977324All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium721Open in IMG/M
3300021559|Ga0210409_11456944All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium560Open in IMG/M
3300022715|Ga0242678_1044054All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium627Open in IMG/M
3300025484|Ga0208587_1039140All Organisms → cellular organisms → Bacteria1239Open in IMG/M
3300026277|Ga0209350_1067868All Organisms → cellular organisms → Bacteria1001Open in IMG/M
3300026296|Ga0209235_1111329All Organisms → cellular organisms → Bacteria → Acidobacteria1164Open in IMG/M
3300026297|Ga0209237_1164934All Organisms → cellular organisms → Bacteria → Acidobacteria819Open in IMG/M
3300026310|Ga0209239_1100720All Organisms → cellular organisms → Bacteria → Acidobacteria1226Open in IMG/M
3300026327|Ga0209266_1005686All Organisms → cellular organisms → Bacteria7472Open in IMG/M
3300026327|Ga0209266_1168934All Organisms → cellular organisms → Bacteria → Acidobacteria852Open in IMG/M
3300026333|Ga0209158_1234091All Organisms → cellular organisms → Bacteria → Acidobacteria631Open in IMG/M
3300026467|Ga0257154_1062938All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300026537|Ga0209157_1118214All Organisms → cellular organisms → Bacteria1230Open in IMG/M
3300026537|Ga0209157_1298149All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300026542|Ga0209805_1211275All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300026551|Ga0209648_10561569All Organisms → cellular organisms → Bacteria → Acidobacteria635Open in IMG/M
3300027535|Ga0209734_1037859All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales905Open in IMG/M
3300027660|Ga0209736_1037301All Organisms → cellular organisms → Bacteria1422Open in IMG/M
3300027826|Ga0209060_10061289All Organisms → cellular organisms → Bacteria1795Open in IMG/M
3300027846|Ga0209180_10153746All Organisms → cellular organisms → Bacteria1326Open in IMG/M
3300027846|Ga0209180_10455396All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis721Open in IMG/M
3300027867|Ga0209167_10327385All Organisms → cellular organisms → Bacteria → Proteobacteria831Open in IMG/M
3300027894|Ga0209068_10095460All Organisms → cellular organisms → Bacteria → Acidobacteria1563Open in IMG/M
3300027903|Ga0209488_10129274All Organisms → cellular organisms → Bacteria1904Open in IMG/M
3300027903|Ga0209488_10897438All Organisms → cellular organisms → Bacteria → Acidobacteria621Open in IMG/M
3300028536|Ga0137415_10046663All Organisms → cellular organisms → Bacteria4219Open in IMG/M
3300029636|Ga0222749_10505500All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300031708|Ga0310686_111395864All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium763Open in IMG/M
3300031720|Ga0307469_11442042All Organisms → cellular organisms → Bacteria → Acidobacteria658Open in IMG/M
3300031753|Ga0307477_10953062Not Available564Open in IMG/M
3300031947|Ga0310909_11549493All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium527Open in IMG/M
3300031954|Ga0306926_10455262All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1576Open in IMG/M
3300032001|Ga0306922_10819389All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium972Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil33.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil15.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil12.60%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil8.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.15%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.94%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.36%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.36%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.36%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.36%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.36%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.36%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.57%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.79%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.79%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.79%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.79%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.79%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.79%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001154Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1EnvironmentalOpen in IMG/M
3300001545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1EnvironmentalOpen in IMG/M
3300002557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cmEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014162Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015052Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022715Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025484Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026467Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-AEnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027535Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027660Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027826Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12636J13339_103539613300001154Forest SoilTVFDQNGQSIPSAGLLTSTQTTSRQIQFALKLIW*
JGI12630J15595_1004997223300001545Forest SoilDNSTVFDQLGSPISSAGLITSTQTTSRQIQFALKLIW*
JGI25381J37097_102995213300002557Grasslands SoilNFAPPLDNRNIFDATGAAIASAGLITSTQTPSRQIQLALKIIW*
Ga0066683_1040819123300005172SoilPTANLTVFDQAGNPVSGAGLITSTQTTSRQIQFALKVIW*
Ga0066688_1074223523300005178SoilPPLDNRNIFDSAGNRVANAGLITSTQTPSRQIQFAVKLIW*
Ga0070708_10079240413300005445Corn, Switchgrass And Miscanthus RhizospherePPLDNRNIFDATGATIANAGLITSTQTPSRQIQFALKVIW*
Ga0066686_1016886513300005446SoilANFASPTANLTVFDQAGNPVSGAGLITSSQTTSRQIQFALKVIW*
Ga0066689_1028668223300005447SoilFASPTQNLAVFDQNGLPVPSAGLITSTQTTSRQIQFALKLIW*
Ga0066697_1020292833300005540SoilDNLTVFDQTGNPISSAGLITSTQTSARQIQFALKVIW*
Ga0070733_1008187433300005541Surface SoilASPTDNRTVFDQNGNSISSAGLITSTQTPSRQIQFALKLIW*
Ga0066704_1068778223300005557SoilDHRNIFDSSGAPIADAGLITSTQTPSRQIQFAVKLIW*
Ga0066699_1055260523300005561SoilNLTVFDPAGNPIPSAGLITSTQTPSRQIQFALKVIW*
Ga0066703_1064321913300005568SoilTDNLNVFDQHGQPVDSAGLITSTQTSSRQIQFALKLIW*
Ga0066705_1066595013300005569SoilPLDNRNIFDSAGSPIGNAGLITSTQTPSRQIQFAIKVIW*
Ga0066691_1085970023300005586SoilPLDNRNIFDATGTAIANAGLITSTQTPSRQIQLALKVIW*
Ga0066706_1022870133300005598SoilAPPLDNRNIFDAAGVAIANAGLITSTQTPSRQIQLALKVIW*
Ga0066903_10651640323300005764Tropical Forest SoilTNPNRQVFNQNLAQIPTGGTLTLTSTTSRQVQFALKLIW*
Ga0066656_1107607313300006034SoilNQPNFASPTDNLTVFDQTGNPIPSAGLITSTQTPSRQIQFALKVIW*
Ga0075030_10029250923300006162WatershedsASPTDNLSVFDQTGQPTGSAGLLTSTQTTSRQIQFALKLIW*
Ga0075030_10112136523300006162WatershedsFSSPTDNLAVFDQNGLPIQSGGLIDSTQTTSRQIQFALKLIW*
Ga0066653_1060524313300006791SoilNIFDSTGQPVANAGLITSTQTPSRQIQFALKLIW*
Ga0066658_1020170913300006794SoilNLTAFDQTGNPIPSAGLITSTQTSSRQIQFALKVIW*
Ga0079221_1174059023300006804Agricultural SoilFNRANFSSPTDNLTIFDQTAFAVHSAGPITSTQTTAREIQFALKLIW*
Ga0075426_1004624313300006903Populus RhizosphereFASPTDHLVVFDQSGKPVPSAGLITSTQTTSRQIQFALKVIW*
Ga0075424_10043950033300006904Populus RhizosphereTDNLTIFDQTASAVHSAGLITSTQTTAREIQFALKVVW*
Ga0075435_10008434913300007076Populus RhizosphereFASPTSNLAVFDQSGKPVASAGLITSTQTTSRQIQLALKVIW*
Ga0099791_1040341613300007255Vadose Zone SoilPLSNNAVFDQSGNPIASAGRITSLQTTARQIQLGLRLTW*
Ga0066710_10161977623300009012Grasslands SoilSPTANLTVFDQAGNPVSGAGLITSTQTTSRQIQFALKVIW
Ga0066710_10193178613300009012Grasslands SoilSPTANLTVFDQARNPVSSAGLITSTQTTSRQIQFALKVIW
Ga0099829_1082627113300009038Vadose Zone SoilNFSPPLDHRNIFDSSGAPIADAGLITSTQTPSRQIQFAVKLIW*
Ga0099830_1085356213300009088Vadose Zone SoilNIFDSTGNPIGNAGLITSTQTPSRQIQFALKVIW*
Ga0066709_10189075513300009137Grasslands SoilNVFDSAGGRVANAGLITSTQTPSRQIQFAVKLIW*
Ga0066709_10257889223300009137Grasslands SoilSPTANLTVFDQAGNPVSGAGLITSTQTTSRQIQFALKVIW*
Ga0134111_1033779413300010329Grasslands SoilPNFASPTDNLTVFDQTGNPISSAGLITSTQTSARQIQFALRVIW*
Ga0126376_1084608913300010359Tropical Forest SoilPPLNNRNVFDSSGNSIANAGLITSTQTPSRQIQFAVKLIW*
Ga0126383_1360135913300010398Tropical Forest SoilTNPNRQVFNQNLAQIPTAGTLTLTSTTSRQVQFALKLIW*
Ga0150983_1295670613300011120Forest SoilRVVFDQNGNSTSSAGLIDSTQTPSRQIQFALKLIF*
Ga0137391_1041961313300011270Vadose Zone SoilNVFDSAGNRVANAGLITSTQTPSRQIQFAVKLIW*
Ga0137391_1153233123300011270Vadose Zone SoilFNRANFASPTDNLIVFDQSGKATSSAGLITSTQTPAREIQFALKVIW*
Ga0137393_1047247013300011271Vadose Zone SoilPTDNLAIFDQGGQPVSSGGLLTSTQTTSRQIQFALKLIW*
Ga0137393_1158597513300011271Vadose Zone SoilGSPTDTLAMFDESGQRIQSAGLLTSTQTTSRQIQFALKLIW*
Ga0137389_1171978713300012096Vadose Zone SoilASPTDNRTVFDQTGSPISGAGLITSTQTPSRQIQFALKLIW*
Ga0137364_1146695413300012198Vadose Zone SoilRNIFDSSGAPIADAGLITSTQTPSRQVQFAVKLIW*
Ga0137383_1039138013300012199Vadose Zone SoilFSSPTANLIVFDQARNPVSSAGLITSTQTTSRQIQFALNVIW*
Ga0137382_1123667223300012200Vadose Zone SoilDNRNIFDSAGSPIGNAGLITSTQTPSRQIQFALKLIW*
Ga0137363_1042886513300012202Vadose Zone SoilNRANFALPLDNKNIFDATGAAIANAGLITSTQTPSRQIQVALKVIW*
Ga0137363_1067279413300012202Vadose Zone SoilNRNIFDSGGNSIASAGLITSTQTPSRQIQFAIKVIW*
Ga0137381_1070518443300012207Vadose Zone SoilPTANLTVFDQAGNPVSGAGLITSTQTSSRQIQFALKVIW*
Ga0137377_1072970223300012211Vadose Zone SoilRNIFDSTGNPIGNAGLITSTQTPSRQIQFALKMIW*
Ga0137377_1171518313300012211Vadose Zone SoilTANLTVFDQAGNPVSGAGLITSTQTTSRQIQFALKVIW*
Ga0137385_1027087013300012359Vadose Zone SoilDIFDSAGDPNAAGGLLKSTTTPSRQIQFALKLIW*
Ga0137361_1126215213300012362Vadose Zone SoilNIFDATGAAIPNAGLITSTQTPSRRIQLALKIIC*
Ga0137390_1177084323300012363Vadose Zone SoilFNRANFSSPTDNRTVFGQDGSLTPGVGLITSTQTPSRQIQFALKLYY*
Ga0137390_1200295113300012363Vadose Zone SoilPPLDNRNIFDSGGNSIASAGLITSTQTPSRQIQFAIKVIW*
Ga0137398_1051138623300012683Vadose Zone SoilHIVFDPTGHLVPGAGLITSTQTPSREIQFALKLIW*
Ga0137398_1117298623300012683Vadose Zone SoilLNHPNFSSPTDNLEVFDKNGQPIGSAGLITSTQTTSRQIQVALKLIW*
Ga0137396_1004796113300012918Vadose Zone SoilNVFDSTGHPVGDAGLITSTQTTSRQIQFALKLLW*
Ga0137396_1066763413300012918Vadose Zone SoilNFSSPTDHLAVFDQNGQRIQSAGLLTSTQTTSRQIQFALKLIW*
Ga0137396_1116325513300012918Vadose Zone SoilHLAVFDQNGQRIQSAGLLTSTQTTSRQVQFALKLIW*
Ga0137396_1125259923300012918Vadose Zone SoilFAPPLDNRDIFDATGAAIANAGLITSTQTPSRQIQLALRIIW*
Ga0137359_1081925913300012923Vadose Zone SoilPLQNNTIFDQSGNLVAGAGLITSTQTPSRQMQFGLKIIW*
Ga0137413_1024244843300012924Vadose Zone SoilRNVFDSTGHPVGDAGLITSTQTTSRQIQFALKLLW*
Ga0137419_1073143513300012925Vadose Zone SoilANFASPTDNLNVFDASGSPVDSAGLITSTQTSSRQIQFALKFIW*
Ga0137419_1076628113300012925Vadose Zone SoilLAVFDQNGQRIQSAGLLTSTQTTSRQIQFALKLIW*
Ga0137419_1096762713300012925Vadose Zone SoilQAFDQSGQPISSAGLITSTQTTSRQIQVALKIIW*
Ga0137410_1062792613300012944Vadose Zone SoilQANFASPTDNLTVFDQNGQPIPSAGLITSTQTTSRQIQFALKLIW*
Ga0126369_1103296413300012971Tropical Forest SoilRANFASPTDNLTVFDQTGNPTPGAGLITSTQTSARQVQFALKVIW*
Ga0134075_1052263123300014154Grasslands SoilFAPPLDNRNIFDATGAPIANAGLITATQTPSRQIQFALKFIW*
Ga0181538_1073689813300014162BogNFSSPTDNLAVFDQFGNSIQSGGLIDSTQTTSRQIQFALKLIW*
Ga0182018_1030216313300014489PalsaQIFTQTFAPVATAGLLASTSTTSRQIQLALKLIW*
Ga0157379_1210090213300014968Switchgrass RhizosphereLNKANFSSPTDNLEVFDKIGQPISGAGLITSTQTTSRQIQFALKTIW*
Ga0137411_104986833300015052Vadose Zone SoilLNRANFAPPLDNRNIFDATGAAIANAGLITSTQTPSRQIQLALKIIW*
Ga0137420_106663723300015054Vadose Zone SoilASPTDNSTVFDQSGKLISSAGLITSTQTTSRQIQFAVKIIW*
Ga0137420_113570613300015054Vadose Zone SoilPTDHSTVFDQSGKLISSAGLITSTQTTSRQIQFAVKIIW*
Ga0137403_1005072713300015264Vadose Zone SoilPPLDNRNIFDATGAAIANAGLITSTQTPSRQIQLALKIIW*
Ga0134072_1009783223300015357Grasslands SoilRNIFDATGAAIANAGLITSTQTPSRQIQLALKIIW*
Ga0182037_1158937413300016404SoilFSPPLDNKDIFDSSGNPIGSAGLITGTETPSRQIQFALKVIW
Ga0182039_1036324813300016422SoilNRANFASPTDNLVVLNQDGSSVSSGGLLTSTQTTSRQIQFALKIIW
Ga0187809_1032671923300017937Freshwater SedimentNLAVFDQNGVPQTQTDGLLDSTQTTSRQIQFALKLIW
Ga0187822_1000215853300017994Freshwater SedimentQNLAVFDQTGLRVSSAGLITSTQTTSRQIQFALKLIW
Ga0187805_1020555723300018007Freshwater SedimentANFASPTDNLTMFDQNGLPISSGGLIDSTQTTSRQIQFALKLIW
Ga0066662_1238238513300018468Grasslands SoilVLNRANFAPPLDNRNIFDATGAAIANAGLITSTQTPSRQIQLALKIIW
Ga0179594_1041440413300020170Vadose Zone SoilAPPLDNKNIFDATGAPIANAGLITAMQTPSRQIQFALKFIW
Ga0179592_1022943123300020199Vadose Zone SoilNFASPTDNLNVFDASGNPVDSAGLIASTQTTSRQIQLALKLIW
Ga0210403_1043121723300020580SoilFASPADNLAVFDQNGVPTQNAGLLTSTQTTSRQIQFALKLIW
Ga0210403_1067240113300020580SoilNVVNHTNFSPPLDNRNIFDSSGSPIGNAGLITSTQTPSREIQFAIKVIW
Ga0210399_1033302433300020581SoilTNFSPPLDNRNIFDSSGNPIGNAGLITSTQTPSREIQFAIKVIW
Ga0210404_1001998113300021088SoilASPTDNSTVFDQSGKPISSAGLITSTQTTSRQIQFALKFIW
Ga0210404_1079144513300021088SoilNRIVFDQTGNRTSSAGLIDSTQTPSRQIQFALKLIW
Ga0210400_1164310923300021170SoilAPPLDNRNIFDSGGNPIASAGLITSTQTPSRQIQFAIKVIW
Ga0210405_1119372323300021171SoilLAVFDQNGVPQTQTAGLLDSTQTTSRQIQFALKLIW
Ga0210408_1021692543300021178SoilRANFASPTQNLAVFDQTGLSVPSAGLITSTQTTSRQIQLALKLIW
Ga0210396_1112799213300021180SoilNLAVFDQNGVLQNSTAGLLDSTQTTSRQIQFALKLIW
Ga0210384_1067172033300021432SoilNLAVFDQTGLSVPSAGLITSTQTTSRQIQLALKIIW
Ga0210409_1097732413300021559SoilLAVFDQTGLSVPSAGLITSTQTTSRQIQLALKIIW
Ga0210409_1145694413300021559SoilDNLTIFDQSGKPVPSAGLITSTQTTSRQIQFALKLIW
Ga0242678_104405413300022715SoilPTQNLAVFDQTGLPVSSAGLITSTQTTSRQIQLALKLIW
Ga0208587_103914013300025484Arctic Peat SoilLDNRNVFDSGGGRVANAGLITSTQTPSRQIQFAVKLIW
Ga0209350_106786813300026277Grasslands SoilFNRANFAPPLDNRNIFDATGAAIASAGLITSTQTPSRQIQLALKIIW
Ga0209235_111132923300026296Grasslands SoilFSSPTANLTVFDQTGSPVSGAGLITTTQTTSRQIQFAVKVIW
Ga0209237_116493423300026297Grasslands SoilTANLTVFDQTGSPVSGAGLITTTQTTSRQIQFAVKVIW
Ga0209239_110072013300026310Grasslands SoilLTVFDQTGSPVSGAGLITTTQTTSRQIQFAVKVIW
Ga0209266_100568683300026327SoilNLTVFDQIGNPVSSAGLITSTQTTSRQIQFALKVIW
Ga0209266_116893413300026327SoilASPTANLTVFDQAGNPVSGAGLITSTQTTSRQIQFALKVIW
Ga0209158_123409113300026333SoilNFASPTQNLAVFDQNEPVPSAGLITSTQTTSRQIQFALKLIW
Ga0257154_106293813300026467SoilNFSPPLDFNQIFDGSGVPIPGAGAITTTVTPSRQMQFGLKIIW
Ga0209157_111821413300026537SoilNLTVFDQTGNPISSAGLITSTQTSARQIQFALKVIW
Ga0209157_129814913300026537SoilANFASPTANLTVFDQAGNPVSGAGLITSSQTTSRQIQFALKVIW
Ga0209805_121127513300026542SoilNLTVFDPAGNPIPSAGLITSTQTPSRQIQFALKVIW
Ga0209648_1056156923300026551Grasslands SoilSPTDNLQAFDQSGQPISSAGLITSTQTTSRQIQVALKIIW
Ga0209734_103785913300027535Forest SoilLAVFDQNGQSVSSAGLLTSTQTTSRQIQFALKLIW
Ga0209736_103730113300027660Forest SoilHATVFDQSGNPISSAGLITSTQTTSRQIQFAVKLIW
Ga0209060_1006128933300027826Surface SoilANFSSPTDNFNVFDGNGSRVDSAGLLDSTQTSSRQIQFALKVIW
Ga0209180_1015374613300027846Vadose Zone SoilLDNRNIFDSGGHPIANAGLITSTQTPSRQIQFALKMIF
Ga0209180_1045539613300027846Vadose Zone SoilFASPTDNLAVFDKNGQPVPSAGLVTSTQTTSRQIQLALKLIW
Ga0209167_1032738513300027867Surface SoilFASPTDNRTVFDQNGNSISSAGLITSTQTPSRQIQFALKLIW
Ga0209068_1009546023300027894WatershedsPVDNLNIFDQTGNRISSAGLVTSTQTTAREIQFALKLIW
Ga0209488_1012927423300027903Vadose Zone SoilPGGGVPSLFDATGASISTAGKITSASTTARQIQFALKLIW
Ga0209488_1089743813300027903Vadose Zone SoilDNRNVFDSSGHPIANAGLITSTQTPSRQIQFALKMIW
Ga0137415_1004666333300028536Vadose Zone SoilVLNCAHFAPPLDHKNIFDVGRTPLAGAGMITSAQTPSRQIQFALEVVW
Ga0222749_1050550033300029636SoilDNLAVYDPSGVQQTETAGLLTSTQTTSRQIQFALKLIW
Ga0310686_11139586423300031708SoilANFASPTQNLAVFDQTGLPVSSAGLITSTPQIQLALKLIW
Ga0307469_1144204223300031720Hardwood Forest SoilFASPVDNRTVFEQTGSPTPGAGLITSTQTPAREIQFALKLIW
Ga0307477_1095306223300031753Hardwood Forest SoilNFSSPTDFLQVFDHNGVPTGSAGLIDSTQTTSRQIQFALKLIW
Ga0310909_1154949313300031947SoilDNLDVFDQSGAPVASAGLITSTQTPSRQIQFALKLIW
Ga0306926_1045526213300031954SoilDNLVVLNQDGSSVSSGGLLTSTQTTSRQIQFALKIIW
Ga0306922_1081938913300032001SoilNLVVLNQDGSSVSSGGLLTSTQTTSRQIQFALKIIW

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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